HEADER FLAVOPROTEIN 03-OCT-22 8B7S TITLE CRYSTAL STRUCTURE OF THE CHLORAMPHENICOL-INACTIVATING OXIDOREDUCTASE TITLE 2 FROM NOVOSPHINGOBIUM SP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHLORAMPHENICOL-INACTIVATING OXIDOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOVOSPHINGOBIUM SP. B 225; SOURCE 3 ORGANISM_TAXID: 1961849; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET11-M11-HIS-TEV KEYWDS CAP-OHASE, CHLORAMPHENICOL, OXIDOREDUCTASE, FLAVIN, FAD, CAP, KEYWDS 2 ANITMICROBIAL RESISTANCE, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.ZHANG,M.TOPLAK,R.SALEEM-BATCHA,L.HOEING,R.P.JAKOB,N.JEHMLICH,M.VON AUTHOR 2 BERGEN,T.MAIER,R.TEUFEL REVDAT 7 01-MAY-24 8B7S 1 REMARK REVDAT 6 01-FEB-23 8B7S 1 JRNL REVDAT 5 14-DEC-22 8B7S 1 JRNL REVDAT 4 07-DEC-22 8B7S 1 JRNL REVDAT 3 30-NOV-22 8B7S 1 JRNL REVDAT 2 23-NOV-22 8B7S 1 JRNL REVDAT 1 16-NOV-22 8B7S 0 JRNL AUTH L.ZHANG,M.TOPLAK,R.SALEEM-BATCHA,L.HOING,R.JAKOB,N.JEHMLICH, JRNL AUTH 2 M.VON BERGEN,T.MAIER,R.TEUFEL JRNL TITL BACTERIAL DEHYDROGENASES FACILITATE OXIDATIVE INACTIVATION JRNL TITL 2 AND BIOREMEDIATION OF CHLORAMPHENICOL. JRNL REF CHEMBIOCHEM V. 24 00632 2023 JRNL REFN ESSN 1439-7633 JRNL PMID 36353978 JRNL DOI 10.1002/CBIC.202200632 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 31130 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6090 - 4.8060 0.98 2541 145 0.1993 0.1953 REMARK 3 2 4.8060 - 3.8153 0.99 2524 134 0.1620 0.1952 REMARK 3 3 3.8153 - 3.3332 0.97 2435 124 0.1957 0.2250 REMARK 3 4 3.3332 - 3.0285 0.98 2433 157 0.2101 0.2409 REMARK 3 5 3.0285 - 2.8115 0.99 2483 128 0.2256 0.2609 REMARK 3 6 2.8115 - 2.6458 1.00 2457 146 0.2202 0.2635 REMARK 3 7 2.6458 - 2.5133 1.00 2470 142 0.2185 0.2524 REMARK 3 8 2.5133 - 2.4039 0.99 2390 140 0.2198 0.2492 REMARK 3 9 2.4039 - 2.3113 0.98 2442 115 0.2392 0.3126 REMARK 3 10 2.3113 - 2.2316 0.99 2476 133 0.2813 0.2851 REMARK 3 11 2.2316 - 2.1618 0.99 2428 130 0.3149 0.3507 REMARK 3 12 2.1618 - 2.1000 0.99 2415 142 0.3252 0.3408 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3003 -2.2898 19.6526 REMARK 3 T TENSOR REMARK 3 T11: 0.3337 T22: 0.2413 REMARK 3 T33: 0.2968 T12: -0.0682 REMARK 3 T13: -0.0166 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 2.2831 L22: 1.8232 REMARK 3 L33: 2.4660 L12: -0.8085 REMARK 3 L13: -0.3468 L23: 0.0474 REMARK 3 S TENSOR REMARK 3 S11: -0.0340 S12: 0.0003 S13: -0.2315 REMARK 3 S21: 0.1664 S22: -0.1053 S23: 0.0810 REMARK 3 S31: 0.0883 S32: -0.1490 S33: 0.1242 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9418 -3.8721 9.8765 REMARK 3 T TENSOR REMARK 3 T11: 0.5425 T22: 0.8358 REMARK 3 T33: 0.6136 T12: -0.0920 REMARK 3 T13: 0.0170 T23: -0.1168 REMARK 3 L TENSOR REMARK 3 L11: 2.3297 L22: 1.5404 REMARK 3 L33: 2.2659 L12: -0.1773 REMARK 3 L13: -0.8827 L23: 1.3199 REMARK 3 S TENSOR REMARK 3 S11: -0.0177 S12: -0.0533 S13: -0.2666 REMARK 3 S21: -0.1280 S22: -0.3236 S23: 0.4039 REMARK 3 S31: 0.2102 S32: -0.9777 S33: 0.2691 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.2554 0.2014 23.7980 REMARK 3 T TENSOR REMARK 3 T11: 0.3909 T22: 0.2512 REMARK 3 T33: 0.3104 T12: -0.0496 REMARK 3 T13: -0.0593 T23: 0.0436 REMARK 3 L TENSOR REMARK 3 L11: 1.6005 L22: 1.7366 REMARK 3 L33: 2.1784 L12: -0.3717 REMARK 3 L13: 0.0073 L23: 0.1200 REMARK 3 S TENSOR REMARK 3 S11: -0.0811 S12: 0.0172 S13: -0.0416 REMARK 3 S21: 0.2702 S22: -0.0355 S23: -0.2428 REMARK 3 S31: 0.0131 S32: 0.0820 S33: 0.1253 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1380 -0.3702 20.2556 REMARK 3 T TENSOR REMARK 3 T11: 0.4847 T22: 0.6800 REMARK 3 T33: 0.5474 T12: -0.0550 REMARK 3 T13: 0.0637 T23: -0.0822 REMARK 3 L TENSOR REMARK 3 L11: 3.3994 L22: 5.3954 REMARK 3 L33: 4.8877 L12: 2.1155 REMARK 3 L13: -2.1951 L23: -3.0651 REMARK 3 S TENSOR REMARK 3 S11: -0.4493 S12: 0.1647 S13: -0.3716 REMARK 3 S21: -0.4979 S22: 0.3020 S23: -0.2433 REMARK 3 S31: 0.6837 S32: -0.4516 S33: 0.0469 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 387 THROUGH 513 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4314 7.4100 24.6991 REMARK 3 T TENSOR REMARK 3 T11: 0.4070 T22: 0.4941 REMARK 3 T33: 0.3643 T12: 0.0242 REMARK 3 T13: 0.0195 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 2.8348 L22: 1.3123 REMARK 3 L33: 1.5955 L12: -0.2191 REMARK 3 L13: 0.3811 L23: 0.1632 REMARK 3 S TENSOR REMARK 3 S11: -0.1759 S12: -0.2577 S13: 0.2077 REMARK 3 S21: 0.2178 S22: -0.0415 S23: 0.2180 REMARK 3 S31: -0.1980 S32: -0.6044 S33: 0.1928 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 514 THROUGH 537 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3178 -0.4740 9.5918 REMARK 3 T TENSOR REMARK 3 T11: 0.3259 T22: 0.3140 REMARK 3 T33: 0.2821 T12: -0.0097 REMARK 3 T13: -0.0155 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 4.5306 L22: 3.1121 REMARK 3 L33: 4.5280 L12: -0.6838 REMARK 3 L13: -0.4278 L23: 0.6106 REMARK 3 S TENSOR REMARK 3 S11: -0.0996 S12: 0.7713 S13: -0.1836 REMARK 3 S21: -0.2637 S22: -0.1225 S23: -0.2527 REMARK 3 S31: -0.2309 S32: 0.0294 S33: 0.1465 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8B7S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292125924. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31156 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 44.609 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 1.70200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS-D03: 10% W/V PEG 4000, 20% REMARK 280 V/V GLYCEROL 0.02 M OF EACH ALCOHOL (1,6-HEXANEDIOL, M 1-BUTANOL, REMARK 280 (RS)-1,2-PROPANEDIOL, 2-PROPANOL, 1,4-BUTANEDIOL, 1,3- REMARK 280 PROPANEDIOL), 0.1 M MES/IMIDAZOLE PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.78809 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.90300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 82.33491 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.78809 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.90300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 82.33491 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 MET A 42 REMARK 465 HIS A 43 REMARK 465 PRO A 44 REMARK 465 PHE A 45 REMARK 465 THR A 46 REMARK 465 ARG A 47 REMARK 465 ILE A 48 REMARK 465 PRO A 49 REMARK 465 ALA A 50 REMARK 465 GLY A 51 REMARK 465 SER A 52 REMARK 465 ALA A 53 REMARK 465 LEU A 54 REMARK 465 ALA A 55 REMARK 465 ILE A 56 REMARK 465 SER A 91 REMARK 465 ILE A 92 REMARK 465 ASN A 93 REMARK 465 GLY A 94 REMARK 465 MET A 95 REMARK 465 GLY A 134 REMARK 465 SER A 135 REMARK 465 ASP A 136 REMARK 465 ASP A 137 REMARK 465 TRP A 138 REMARK 465 ARG A 139 REMARK 465 GLY A 140 REMARK 465 GLY A 141 REMARK 465 GLN A 142 REMARK 465 GLY A 143 REMARK 465 PRO A 144 REMARK 465 GLN A 145 REMARK 465 HIS A 146 REMARK 465 VAL A 147 REMARK 465 ASP A 148 REMARK 465 ARG A 149 REMARK 465 THR A 150 REMARK 465 ARG A 151 REMARK 465 VAL A 152 REMARK 465 PRO A 153 REMARK 465 PRO A 308 REMARK 465 SER A 309 REMARK 465 LEU A 310 REMARK 465 GLY A 311 REMARK 465 ALA A 312 REMARK 465 ASN A 313 REMARK 465 ARG A 314 REMARK 465 ASN A 315 REMARK 465 PRO A 316 REMARK 465 VAL A 317 REMARK 465 SER A 318 REMARK 465 ASP A 319 REMARK 465 LEU A 320 REMARK 465 LEU A 321 REMARK 465 HIS A 322 REMARK 465 GLY A 323 REMARK 465 MET A 324 REMARK 465 ASN A 325 REMARK 465 PHE A 326 REMARK 465 ILE A 327 REMARK 465 PHE A 328 REMARK 465 ARG A 329 REMARK 465 GLY A 330 REMARK 465 ARG A 331 REMARK 465 GLY A 332 REMARK 465 SER A 364 REMARK 465 TYR A 365 REMARK 465 ASP A 366 REMARK 465 PHE A 367 REMARK 465 ASP A 368 REMARK 465 GLU A 369 REMARK 465 ARG A 370 REMARK 465 GLY A 371 REMARK 465 PRO A 372 REMARK 465 LYS A 373 REMARK 465 LEU A 374 REMARK 465 TYR A 375 REMARK 465 ASN A 376 REMARK 465 THR A 538 REMARK 465 VAL A 539 REMARK 465 GLN A 540 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 750 O HOH A 789 2.14 REMARK 500 O HOH A 781 O HOH A 800 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 178 40.59 -96.37 REMARK 500 VAL A 443 -77.40 -121.02 REMARK 500 GLU A 453 -41.89 -130.35 REMARK 500 TYR A 470 37.89 72.34 REMARK 500 CYS A 474 15.57 86.23 REMARK 500 ASP A 502 -174.41 -174.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 99 0.15 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 815 DISTANCE = 5.92 ANGSTROMS DBREF 8B7S A -1 540 PDB 8B7S 8B7S -1 540 SEQRES 1 A 542 GLY ALA MET GLY SER LYS GLN PHE ASP TYR ILE ILE ILE SEQRES 2 A 542 GLY GLY GLY SER ALA GLY ALA VAL VAL ALA ASN ARG LEU SEQRES 3 A 542 SER GLU ASP SER GLY THR SER VAL LEU LEU LEU GLU ALA SEQRES 4 A 542 GLY GLY SER ASP MET HIS PRO PHE THR ARG ILE PRO ALA SEQRES 5 A 542 GLY SER ALA LEU ALA ILE ALA SER PRO LYS PHE ASN TRP SEQRES 6 A 542 MET TYR ASP VAL GLU PRO ASP PRO SER ARG ASP GLY ARG SEQRES 7 A 542 VAL ASP ILE TRP PRO ALA GLY LYS VAL LEU GLY GLY GLY SEQRES 8 A 542 SER SER ILE ASN GLY MET MET PHE VAL ARG GLY ASN ALA SEQRES 9 A 542 TRP ASP TYR ASP LEU TRP ALA GLN LYS GLY ALA THR GLY SEQRES 10 A 542 TRP ASP TYR ALA GLY VAL LEU PRO TYR PHE ARG LYS MET SEQRES 11 A 542 GLU SER TYR ALA LEU GLY SER ASP ASP TRP ARG GLY GLY SEQRES 12 A 542 GLN GLY PRO GLN HIS VAL ASP ARG THR ARG VAL PRO ASN SEQRES 13 A 542 GLU LEU THR ASP LEU TRP VAL LYS SER ALA GLU LYS ILE SEQRES 14 A 542 GLY ILE ARG ARG ASN ASP ASP LEU ASN GLY ALA SER GLN SEQRES 15 A 542 GLU GLY VAL GLY TYR CYS ASP ALA SER GLN LYS ASP GLY SEQRES 16 A 542 TRP ARG HIS SER THR ALA GLN ALA TYR ILE ARG GLY ILE SEQRES 17 A 542 LYS GLY LYS ARG ALA ASN PHE THR LEU GLU LEU LYS ALA SEQRES 18 A 542 PHE VAL GLU ARG ILE ILE ILE GLU GLY GLY ARG ALA VAL SEQRES 19 A 542 GLY VAL ARG TYR SER LYS ASN GLY ARG GLY MET GLU VAL SEQRES 20 A 542 ARG ALA ARG LYS GLY VAL VAL LEU SER ALA GLY ALA ILE SEQRES 21 A 542 ALA SER PRO LYS LEU LEU LEU LEU SER GLY ILE GLY PRO SEQRES 22 A 542 ALA GLU GLU LEU ALA GLN HIS GLU ILE PRO MET VAL VAL SEQRES 23 A 542 ASP SER PRO ASP VAL GLY ALA ASN LEU GLN GLU HIS PRO SEQRES 24 A 542 ALA VAL ILE MET SER PHE HIS VAL ASN LYS PRO SER LEU SEQRES 25 A 542 GLY ALA ASN ARG ASN PRO VAL SER ASP LEU LEU HIS GLY SEQRES 26 A 542 MET ASN PHE ILE PHE ARG GLY ARG GLY PRO LEU THR THR SEQRES 27 A 542 GLY ILE GLY HIS ALA GLN ALA LEU VAL LYS THR ASP ASP SEQRES 28 A 542 ARG TYR ALA ALA PRO ASN VAL GLN LEU ILE ILE SER PRO SEQRES 29 A 542 PHE SER TYR ASP PHE ASP GLU ARG GLY PRO LYS LEU TYR SEQRES 30 A 542 ASN LYS PRO SER VAL GLY LEU ALA VAL GLY LEU ALA ARG SEQRES 31 A 542 PRO GLU SER ARG GLY THR VAL ARG LEU LYS SER ALA ASP SEQRES 32 A 542 PRO LYS ASP LYS PRO LEU ILE ASN TYR PRO LEU LEU GLY SEQRES 33 A 542 GLU GLN SER GLU VAL ASP GLN MET VAL ALA GLY CYS ARG SEQRES 34 A 542 ILE LEU ARG LYS ILE ALA HIS ALA GLU PRO PHE ARG ASP SEQRES 35 A 542 VAL LEU VAL ASP GLU ARG LEU PRO GLY ALA GLU VAL GLU SEQRES 36 A 542 SER ASP ALA GLU LEU GLU ARG TYR ILE ARG GLN PHE ALA SEQRES 37 A 542 PHE PRO MET TYR HIS VAL SER CYS SER CYS ARG MET GLY SEQRES 38 A 542 SER ASP PRO ALA SER VAL VAL ASP PRO GLU LEU ARG VAL SEQRES 39 A 542 ARG GLY VAL SER GLY LEU TRP VAL VAL ASP ALA SER VAL SEQRES 40 A 542 MET PRO THR LEU PRO ALA GLY ASN ILE ASN ALA SER ALA SEQRES 41 A 542 ILE MET ILE GLY GLU ARG GLY ALA ASP LEU ILE LYS GLN SEQRES 42 A 542 GLN ALA LYS THR PRO GLU THR VAL GLN HET FAD A 601 84 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 HOH *115(H2 O) HELIX 1 AA1 GLY A 14 SER A 25 1 12 HELIX 2 AA2 ASP A 70 ASP A 74 5 5 HELIX 3 AA3 ASN A 101 LYS A 111 1 11 HELIX 4 AA4 ASP A 117 ALA A 132 1 16 HELIX 5 AA5 GLU A 155 GLY A 168 1 14 HELIX 6 AA6 ASP A 173 GLY A 177 5 5 HELIX 7 AA7 THR A 198 GLY A 205 1 8 HELIX 8 AA8 ALA A 255 SER A 267 1 13 HELIX 9 AA9 PRO A 271 HIS A 278 1 8 HELIX 10 AB1 GLU A 415 ALA A 435 1 21 HELIX 11 AB2 PRO A 437 ASP A 440 5 4 HELIX 12 AB3 SER A 454 ALA A 466 1 13 HELIX 13 AB4 ASP A 502 MET A 506 5 5 HELIX 14 AB5 ASN A 513 THR A 535 1 23 SHEET 1 AA1 6 PHE A 213 GLU A 216 0 SHEET 2 AA1 6 VAL A 32 LEU A 35 1 N VAL A 32 O THR A 214 SHEET 3 AA1 6 GLN A 5 ILE A 11 1 N ILE A 10 O LEU A 35 SHEET 4 AA1 6 ARG A 241 LEU A 253 1 O ARG A 248 N PHE A 6 SHEET 5 AA1 6 ARG A 230 LYS A 238 -1 N TYR A 236 O MET A 243 SHEET 6 AA1 6 PHE A 220 GLU A 227 -1 N GLU A 227 O ARG A 230 SHEET 1 AA2 5 PHE A 213 GLU A 216 0 SHEET 2 AA2 5 VAL A 32 LEU A 35 1 N VAL A 32 O THR A 214 SHEET 3 AA2 5 GLN A 5 ILE A 11 1 N ILE A 10 O LEU A 35 SHEET 4 AA2 5 ARG A 241 LEU A 253 1 O ARG A 248 N PHE A 6 SHEET 5 AA2 5 LEU A 498 VAL A 500 1 O TRP A 499 N LEU A 253 SHEET 1 AA3 2 TYR A 65 ASP A 66 0 SHEET 2 AA3 2 ILE A 79 TRP A 80 -1 O TRP A 80 N TYR A 65 SHEET 1 AA4 2 PHE A 97 ARG A 99 0 SHEET 2 AA4 2 GLY A 193 ARG A 195 -1 O TRP A 194 N VAL A 98 SHEET 1 AA5 6 GLY A 182 TYR A 185 0 SHEET 2 AA5 6 ALA A 341 VAL A 345 -1 O GLN A 342 N GLY A 184 SHEET 3 AA5 6 VAL A 356 SER A 361 -1 O VAL A 356 N VAL A 345 SHEET 4 AA5 6 SER A 379 LEU A 386 -1 O GLY A 385 N GLN A 357 SHEET 5 AA5 6 PRO A 297 VAL A 305 -1 N VAL A 299 O VAL A 384 SHEET 6 AA5 6 LEU A 442 GLU A 445 -1 O ASP A 444 N HIS A 304 SHEET 1 AA6 6 GLY A 182 TYR A 185 0 SHEET 2 AA6 6 ALA A 341 VAL A 345 -1 O GLN A 342 N GLY A 184 SHEET 3 AA6 6 VAL A 356 SER A 361 -1 O VAL A 356 N VAL A 345 SHEET 4 AA6 6 SER A 379 LEU A 386 -1 O GLY A 385 N GLN A 357 SHEET 5 AA6 6 PRO A 297 VAL A 305 -1 N VAL A 299 O VAL A 384 SHEET 6 AA6 6 PHE A 467 PRO A 468 -1 O PHE A 467 N ALA A 298 SHEET 1 AA7 2 ILE A 269 GLY A 270 0 SHEET 2 AA7 2 VAL A 284 ASP A 285 1 O VAL A 284 N GLY A 270 SHEET 1 AA8 2 THR A 394 ARG A 396 0 SHEET 2 AA8 2 LEU A 407 ASN A 409 -1 O LEU A 407 N ARG A 396 CISPEP 1 GLU A 436 PRO A 437 0 -0.17 CRYST1 74.623 43.806 164.698 90.00 91.06 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013401 0.000000 0.000248 0.00000 SCALE2 0.000000 0.022828 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006073 0.00000