HEADER SUGAR BINDING PROTEIN 04-OCT-22 8B8F TITLE ATOMIC STRUCTURE OF THE BETA-TREFOIL DOMAIN OF THE LACCARIA BICOLOR TITLE 2 LECTIN LBL IN COMPLEX WITH LACTOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-TERMINAL BETA-TREFOIL DOMAIN OF THE LECTIN LBL FROM COMPND 3 LACCARIA BICOLOR; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACCARIA BICOLOR S238N-H53; SOURCE 3 ORGANISM_TAXID: 1035139; SOURCE 4 STRAIN: S238N-H82 / ATCC MYA-4686; SOURCE 5 GENE: LACBIDRAFT_318163; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-TREFOIL, LACCARIA BICOLOR, LECTIN, POLYSACCHARIDE, SUGAR- KEYWDS 2 SPECIFICITY AT ATOMIC RESOLUTION, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.ACEBRON,M.A.CAMPANERO-RHODES,D.SOLIS,M.MENENDEZ,C.GARCIA,M.P.LILLO, AUTHOR 2 J.M.MANCHENO REVDAT 2 07-FEB-24 8B8F 1 REMARK REVDAT 1 22-FEB-23 8B8F 0 JRNL AUTH I.ACEBRON,M.A.CAMPANERO-RHODES,D.SOLIS,M.MENENDEZ,C.GARCIA, JRNL AUTH 2 M.P.LILLO,J.M.MANCHENO JRNL TITL ATOMIC CRYSTAL STRUCTURE AND SUGAR SPECIFICITY OF A JRNL TITL 2 BETA-TREFOIL LECTIN DOMAIN FROM THE ECTOMYCORRHIZAL JRNL TITL 3 BASIDIOMYCETE LACCARIA BICOLOR. JRNL REF INT.J.BIOL.MACROMOL. V. 233 23507 2023 JRNL REFN ISSN 0141-8130 JRNL PMID 36754262 JRNL DOI 10.1016/J.IJBIOMAC.2023.123507 REMARK 2 REMARK 2 RESOLUTION. 1.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 79600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 15.2000 - 3.0500 1.00 2827 132 0.1482 0.1354 REMARK 3 2 3.0500 - 2.4300 1.00 2675 161 0.1529 0.1809 REMARK 3 3 2.4300 - 2.1200 1.00 2667 134 0.1409 0.1415 REMARK 3 4 2.1200 - 1.9300 1.00 2647 133 0.1311 0.1618 REMARK 3 5 1.9300 - 1.7900 1.00 2659 122 0.1309 0.1488 REMARK 3 6 1.7900 - 1.6800 1.00 2614 146 0.1343 0.1500 REMARK 3 7 1.6800 - 1.6000 1.00 2616 146 0.1277 0.1708 REMARK 3 8 1.6000 - 1.5300 1.00 2580 178 0.1300 0.1382 REMARK 3 9 1.5300 - 1.4700 1.00 2619 122 0.1368 0.1360 REMARK 3 10 1.4700 - 1.4200 1.00 2600 138 0.1318 0.1360 REMARK 3 11 1.4200 - 1.3800 1.00 2589 146 0.1295 0.1617 REMARK 3 12 1.3800 - 1.3400 1.00 2584 144 0.1298 0.1410 REMARK 3 13 1.3400 - 1.3000 1.00 2616 143 0.1323 0.1463 REMARK 3 14 1.3000 - 1.2700 1.00 2592 131 0.1335 0.1389 REMARK 3 15 1.2700 - 1.2400 1.00 2613 119 0.1324 0.1549 REMARK 3 16 1.2400 - 1.2100 1.00 2579 137 0.1276 0.1358 REMARK 3 17 1.2100 - 1.1900 1.00 2585 121 0.1282 0.1254 REMARK 3 18 1.1900 - 1.1700 1.00 2581 132 0.1348 0.1414 REMARK 3 19 1.1700 - 1.1500 1.00 2616 142 0.1358 0.1341 REMARK 3 20 1.1500 - 1.1300 1.00 2574 134 0.1302 0.1562 REMARK 3 21 1.1300 - 1.1100 1.00 2594 136 0.1397 0.1600 REMARK 3 22 1.1100 - 1.0900 1.00 2568 144 0.1295 0.1533 REMARK 3 23 1.0900 - 1.0800 1.00 2567 137 0.1423 0.1451 REMARK 3 24 1.0800 - 1.0600 1.00 2576 136 0.1428 0.1732 REMARK 3 25 1.0600 - 1.0500 1.00 2599 126 0.1539 0.1519 REMARK 3 26 1.0500 - 1.0300 1.00 2593 147 0.1618 0.1762 REMARK 3 27 1.0300 - 1.0200 1.00 2545 150 0.1763 0.1965 REMARK 3 28 1.0200 - 1.0100 1.00 2592 125 0.1866 0.1950 REMARK 3 29 1.0100 - 1.0000 1.00 2538 133 0.2126 0.2137 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.50 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.080 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.319 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 5.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1473 REMARK 3 ANGLE : 1.269 2038 REMARK 3 CHIRALITY : 0.086 246 REMARK 3 PLANARITY : 0.014 250 REMARK 3 DIHEDRAL : 7.145 193 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:8) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0005 -1.6802 -18.6577 REMARK 3 T TENSOR REMARK 3 T11: 0.0723 T22: 0.0516 REMARK 3 T33: 0.0766 T12: -0.0098 REMARK 3 T13: 0.0097 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 4.2826 L22: 8.7083 REMARK 3 L33: 4.9961 L12: -5.6554 REMARK 3 L13: 2.2546 L23: -2.2764 REMARK 3 S TENSOR REMARK 3 S11: 0.1283 S12: 0.2625 S13: 0.0375 REMARK 3 S21: -0.0859 S22: -0.1584 S23: -0.1986 REMARK 3 S31: 0.2737 S32: 0.2702 S33: 0.0091 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 9:20) REMARK 3 ORIGIN FOR THE GROUP (A): -24.5023 6.9597 -13.8261 REMARK 3 T TENSOR REMARK 3 T11: 0.0171 T22: 0.0141 REMARK 3 T33: 0.0274 T12: -0.0021 REMARK 3 T13: 0.0055 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.6227 L22: 1.5480 REMARK 3 L33: 0.2135 L12: -0.2683 REMARK 3 L13: 0.2314 L23: 0.2161 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: -0.0012 S13: -0.0362 REMARK 3 S21: -0.0361 S22: -0.0074 S23: 0.0182 REMARK 3 S31: 0.0168 S32: -0.0198 S33: -0.0198 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 21:34) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1568 20.2981 -11.5375 REMARK 3 T TENSOR REMARK 3 T11: 0.0278 T22: 0.0233 REMARK 3 T33: 0.0314 T12: -0.0012 REMARK 3 T13: 0.0040 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.9498 L22: 2.4689 REMARK 3 L33: 0.9140 L12: -1.0191 REMARK 3 L13: 0.6821 L23: -0.2744 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: -0.0256 S13: 0.0937 REMARK 3 S21: 0.0158 S22: 0.0187 S23: -0.0196 REMARK 3 S31: -0.0927 S32: 0.0149 S33: 0.0045 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 35:39) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3989 15.2462 -6.3864 REMARK 3 T TENSOR REMARK 3 T11: 0.0273 T22: 0.0168 REMARK 3 T33: 0.0205 T12: 0.0037 REMARK 3 T13: 0.0044 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.7230 L22: 2.1653 REMARK 3 L33: 3.2729 L12: -0.3780 REMARK 3 L13: 0.6841 L23: 0.4808 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: -0.0838 S13: -0.1366 REMARK 3 S21: 0.1103 S22: -0.0011 S23: 0.0195 REMARK 3 S31: -0.0150 S32: -0.0150 S33: 0.0120 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 40:50) REMARK 3 ORIGIN FOR THE GROUP (A): -28.7402 14.0525 -15.2197 REMARK 3 T TENSOR REMARK 3 T11: 0.0183 T22: 0.0217 REMARK 3 T33: 0.0225 T12: -0.0006 REMARK 3 T13: 0.0021 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.6264 L22: 0.9084 REMARK 3 L33: 0.8089 L12: 0.2275 REMARK 3 L13: 0.4079 L23: -0.1409 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.0002 S13: -0.0043 REMARK 3 S21: 0.0117 S22: -0.0103 S23: 0.0713 REMARK 3 S31: -0.0606 S32: -0.0914 S33: 0.0034 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 51:57) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8139 5.6902 -27.1702 REMARK 3 T TENSOR REMARK 3 T11: 0.0437 T22: 0.0382 REMARK 3 T33: 0.0501 T12: -0.0030 REMARK 3 T13: 0.0220 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 3.0737 L22: 0.8688 REMARK 3 L33: 1.0203 L12: -0.9935 REMARK 3 L13: 0.7556 L23: -0.4994 REMARK 3 S TENSOR REMARK 3 S11: 0.0134 S12: 0.1428 S13: 0.0465 REMARK 3 S21: -0.1348 S22: -0.0572 S23: -0.1515 REMARK 3 S31: -0.0451 S32: 0.0249 S33: -0.2230 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 58:70) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9292 12.7221 -22.5499 REMARK 3 T TENSOR REMARK 3 T11: 0.0277 T22: 0.0341 REMARK 3 T33: 0.0272 T12: -0.0045 REMARK 3 T13: -0.0001 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 2.3542 L22: 2.8947 REMARK 3 L33: 0.6194 L12: -2.0404 REMARK 3 L13: -0.7766 L23: 0.5696 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: 0.0641 S13: -0.0382 REMARK 3 S21: -0.0724 S22: 0.0235 S23: -0.0105 REMARK 3 S31: 0.0275 S32: 0.0006 S33: 0.0085 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 71:75) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9083 16.6594 -16.7710 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.0353 REMARK 3 T33: 0.0180 T12: -0.0085 REMARK 3 T13: 0.0073 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 3.4474 L22: 2.6077 REMARK 3 L33: 3.1546 L12: 0.0113 REMARK 3 L13: 2.5903 L23: -0.6648 REMARK 3 S TENSOR REMARK 3 S11: 0.0348 S12: 0.0060 S13: 0.0071 REMARK 3 S21: 0.1174 S22: -0.0255 S23: -0.0401 REMARK 3 S31: -0.1179 S32: 0.0647 S33: -0.0099 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 76:81) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5688 20.0063 -10.6072 REMARK 3 T TENSOR REMARK 3 T11: 0.1165 T22: 0.0645 REMARK 3 T33: 0.0893 T12: -0.0409 REMARK 3 T13: -0.0289 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.0404 L22: 0.0803 REMARK 3 L33: 0.7466 L12: -0.1055 REMARK 3 L13: 0.0219 L23: 0.2256 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: -0.0271 S13: 0.1381 REMARK 3 S21: 0.0298 S22: 0.1002 S23: -0.2727 REMARK 3 S31: -0.1364 S32: 0.1230 S33: 0.3503 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 82:88) REMARK 3 ORIGIN FOR THE GROUP (A): -14.6539 19.0709 -21.4070 REMARK 3 T TENSOR REMARK 3 T11: 0.0204 T22: 0.0506 REMARK 3 T33: 0.0399 T12: -0.0061 REMARK 3 T13: 0.0025 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.9273 L22: 4.0736 REMARK 3 L33: 3.1860 L12: -0.2899 REMARK 3 L13: -0.2996 L23: -0.1777 REMARK 3 S TENSOR REMARK 3 S11: 0.0601 S12: 0.1846 S13: 0.0763 REMARK 3 S21: -0.0724 S22: 0.0352 S23: 0.0281 REMARK 3 S31: -0.1157 S32: -0.0197 S33: -0.0914 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 89:95) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1119 14.2230 -23.4579 REMARK 3 T TENSOR REMARK 3 T11: 0.0190 T22: 0.0315 REMARK 3 T33: 0.0196 T12: 0.0015 REMARK 3 T13: 0.0076 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 3.6630 L22: 1.9022 REMARK 3 L33: 3.1118 L12: 0.6261 REMARK 3 L13: 0.7911 L23: 1.3146 REMARK 3 S TENSOR REMARK 3 S11: 0.0059 S12: 0.1326 S13: 0.0600 REMARK 3 S21: -0.0384 S22: 0.0163 S23: -0.0595 REMARK 3 S31: -0.1297 S32: -0.0333 S33: -0.0046 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 96:99) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3972 2.9943 -15.2760 REMARK 3 T TENSOR REMARK 3 T11: 0.0420 T22: 0.0249 REMARK 3 T33: 0.0384 T12: 0.0036 REMARK 3 T13: 0.0055 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.7257 L22: 3.4875 REMARK 3 L33: 4.1973 L12: -0.8995 REMARK 3 L13: 1.2906 L23: -3.5772 REMARK 3 S TENSOR REMARK 3 S11: -0.0169 S12: 0.0724 S13: -0.0733 REMARK 3 S21: -0.1152 S22: -0.0306 S23: -0.1515 REMARK 3 S31: 0.1760 S32: 0.0907 S33: 0.0074 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 100:105) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5419 -4.2004 -5.3800 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.0739 REMARK 3 T33: 0.1286 T12: 0.0188 REMARK 3 T13: 0.0020 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 4.2107 L22: 2.7360 REMARK 3 L33: 2.1827 L12: 0.2245 REMARK 3 L13: 0.8773 L23: -2.1660 REMARK 3 S TENSOR REMARK 3 S11: -0.0633 S12: -0.4881 S13: -0.3275 REMARK 3 S21: 0.2614 S22: 0.1682 S23: 0.1795 REMARK 3 S31: 0.3946 S32: 0.0285 S33: -0.1090 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 106:111) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4327 1.3505 -10.0180 REMARK 3 T TENSOR REMARK 3 T11: 0.0561 T22: 0.0255 REMARK 3 T33: 0.0568 T12: 0.0017 REMARK 3 T13: -0.0147 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 0.6486 L22: 2.0414 REMARK 3 L33: 1.1080 L12: -0.0037 REMARK 3 L13: 0.2536 L23: -0.1080 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: 0.0268 S13: -0.1893 REMARK 3 S21: -0.0769 S22: -0.0253 S23: 0.1938 REMARK 3 S31: 0.1540 S32: -0.0101 S33: 0.0019 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 112:117) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3829 7.7916 -15.1413 REMARK 3 T TENSOR REMARK 3 T11: 0.0379 T22: 0.0896 REMARK 3 T33: 0.0436 T12: 0.0061 REMARK 3 T13: 0.0081 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 3.0491 L22: 6.3015 REMARK 3 L33: 1.7748 L12: -0.4328 REMARK 3 L13: 0.4610 L23: 2.8186 REMARK 3 S TENSOR REMARK 3 S11: -0.0330 S12: -0.2208 S13: -0.1294 REMARK 3 S21: -0.0019 S22: -0.0007 S23: -0.3247 REMARK 3 S31: 0.0222 S32: 0.3996 S33: 0.0039 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN A AND RESID 118:127) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1436 12.7975 -3.4019 REMARK 3 T TENSOR REMARK 3 T11: 0.0450 T22: 0.0545 REMARK 3 T33: 0.0297 T12: 0.0072 REMARK 3 T13: -0.0133 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.7001 L22: 1.3444 REMARK 3 L33: 2.4617 L12: -0.0710 REMARK 3 L13: 0.0700 L23: 0.9864 REMARK 3 S TENSOR REMARK 3 S11: -0.0896 S12: -0.1690 S13: 0.1242 REMARK 3 S21: 0.1192 S22: 0.0456 S23: -0.0254 REMARK 3 S31: 0.0123 S32: 0.0244 S33: 0.0163 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN A AND RESID 128:133) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8678 18.5490 -3.6606 REMARK 3 T TENSOR REMARK 3 T11: 0.0855 T22: 0.0540 REMARK 3 T33: 0.0922 T12: -0.0016 REMARK 3 T13: -0.0279 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.3353 L22: 0.4609 REMARK 3 L33: 2.3200 L12: 0.0243 REMARK 3 L13: 0.7746 L23: -0.9141 REMARK 3 S TENSOR REMARK 3 S11: -0.1407 S12: -0.2278 S13: 0.3944 REMARK 3 S21: 0.1016 S22: -0.0105 S23: -0.1567 REMARK 3 S31: -0.4119 S32: -0.0865 S33: -0.0642 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN A AND RESID 134:139) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4605 8.0070 -5.8685 REMARK 3 T TENSOR REMARK 3 T11: 0.0600 T22: 0.1208 REMARK 3 T33: 0.0859 T12: 0.0115 REMARK 3 T13: -0.0202 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.8472 L22: 3.7751 REMARK 3 L33: 4.6290 L12: 0.7928 REMARK 3 L13: -1.4470 L23: 2.2673 REMARK 3 S TENSOR REMARK 3 S11: -0.0768 S12: -0.1812 S13: -0.2732 REMARK 3 S21: 0.3026 S22: 0.0749 S23: -0.3667 REMARK 3 S31: 0.2770 S32: 0.4311 S33: 0.0134 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN A AND RESID 140:144) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1518 4.5302 -1.3581 REMARK 3 T TENSOR REMARK 3 T11: 0.0694 T22: 0.0578 REMARK 3 T33: 0.0642 T12: 0.0071 REMARK 3 T13: -0.0285 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 5.9546 L22: 1.2448 REMARK 3 L33: 2.5526 L12: -1.0825 REMARK 3 L13: 0.2805 L23: -0.5166 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: -0.2337 S13: -0.2151 REMARK 3 S21: 0.1457 S22: -0.0385 S23: -0.2502 REMARK 3 S31: 0.2200 S32: 0.1472 S33: 0.0442 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN A AND RESID 145:152) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5002 4.2594 -10.9477 REMARK 3 T TENSOR REMARK 3 T11: 0.0427 T22: 0.0300 REMARK 3 T33: 0.0586 T12: -0.0090 REMARK 3 T13: -0.0160 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 5.4723 L22: 0.9010 REMARK 3 L33: 2.5796 L12: 0.6410 REMARK 3 L13: 2.5733 L23: 0.4125 REMARK 3 S TENSOR REMARK 3 S11: 0.0515 S12: -0.0837 S13: -0.0628 REMARK 3 S21: -0.0054 S22: 0.0185 S23: 0.1700 REMARK 3 S31: 0.1284 S32: -0.1202 S33: -0.0571 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8B8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292125869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79659 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.000 REMARK 200 RESOLUTION RANGE LOW (A) : 15.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12300 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.12300 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2Y9F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 6000, 0.1 M SODIUM REMARK 280 ACETATE, PH 5.0, AND 0.2 M AMMONIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 26.26500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.63500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.26500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.63500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 334 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 378 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 35 -155.33 -162.36 REMARK 500 ILE A 133 -157.03 -156.06 REMARK 500 THR A 138 44.38 -107.15 REMARK 500 THR A 138 43.25 -107.15 REMARK 500 SER A 139 -147.75 -134.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 449 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 450 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH A 451 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH A 452 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A 454 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 455 DISTANCE = 6.76 ANGSTROMS REMARK 525 HOH A 456 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A 457 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH A 458 DISTANCE = 7.30 ANGSTROMS DBREF 8B8F A 1 152 UNP B0D650 B0D650_LACBS 1 152 SEQRES 1 A 152 MET SER ASN GLU TYR ASN PRO PRO LEU GLY ILE ALA PHE SEQRES 2 A 152 ARG LEU CYS GLY LEU ALA SER ASP ARG VAL LEU PHE SER SEQRES 3 A 152 ARG VAL SER PRO SER PRO GLU VAL PHE HIS HIS PRO LYS SEQRES 4 A 152 SER GLU VAL TYR PRO ASP GLN TRP PHE VAL ALA ILE PRO SEQRES 5 A 152 GLY SER GLY GLN ASN ALA GLY CYS TYR ALA ILE LYS SER SEQRES 6 A 152 LYS ASN THR GLY LYS VAL LEU PHE SER ARG MET SER PRO SEQRES 7 A 152 ASP PRO ARG VAL GLY HIS ILE ASP GLY ASP GLY LYS TYR SEQRES 8 A 152 PRO ASP ASN TRP PHE LYS PHE GLU ALA GLY SER GLY LYS SEQRES 9 A 152 TYR ALA GLY TYR PHE ARG LEU ARG ALA VAL ALA SER ASP SEQRES 10 A 152 THR VAL LEU VAL SER ARG THR SER THR GLY THR ASP THR SEQRES 11 A 152 GLN VAL ILE ASN TYR PRO ALA THR SER ALA LYS TYR ASP SEQRES 12 A 152 ASP GLN TYR PHE THR ILE LEU PHE ASP HET GLC C 1 23 HET GAL C 2 22 HET GLC B 1 23 HET GAL B 2 22 HET GLC D 1 23 HET GAL D 2 22 HET BGC E 1 23 HET GAL E 2 22 HET BGC F 1 23 HET GAL F 2 22 HET BGC G 1 23 HET GAL G 2 22 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 GLC 3(C6 H12 O6) FORMUL 2 GAL 6(C6 H12 O6) FORMUL 5 BGC 3(C6 H12 O6) FORMUL 8 HOH *258(H2 O) HELIX 1 AA1 TYR A 43 GLN A 46 5 4 HELIX 2 AA2 SER A 54 ALA A 58 5 5 HELIX 3 AA3 TYR A 91 ASN A 94 5 4 HELIX 4 AA4 SER A 102 ALA A 106 5 5 HELIX 5 AA5 GLY A 127 THR A 130 5 4 HELIX 6 AA6 TYR A 142 GLN A 145 5 4 SHEET 1 AA1 5 GLU A 4 TYR A 5 0 SHEET 2 AA1 5 PHE A 96 ALA A 100 -1 O PHE A 98 N TYR A 5 SHEET 3 AA1 5 PHE A 109 ALA A 113 -1 O ARG A 112 N LYS A 97 SHEET 4 AA1 5 THR A 118 SER A 122 -1 O THR A 118 N ALA A 113 SHEET 5 AA1 5 VAL A 132 PRO A 136 -1 O TYR A 135 N VAL A 119 SHEET 1 AA2 2 ARG A 14 GLY A 17 0 SHEET 2 AA2 2 PHE A 147 LEU A 150 -1 O LEU A 150 N ARG A 14 SHEET 1 AA3 2 ARG A 22 SER A 26 0 SHEET 2 AA3 2 VAL A 34 PRO A 38 -1 O HIS A 37 N VAL A 23 SHEET 1 AA4 2 PHE A 48 PRO A 52 0 SHEET 2 AA4 2 TYR A 61 SER A 65 -1 O LYS A 64 N VAL A 49 SHEET 1 AA5 2 VAL A 71 SER A 74 0 SHEET 2 AA5 2 VAL A 82 ILE A 85 -1 O ILE A 85 N VAL A 71 LINK O4 AGLC C 1 C1 AGAL C 2 1555 1555 1.41 LINK O4 AGLC B 1 C1 AGAL B 2 1555 1555 1.42 LINK O4 AGLC D 1 C1 AGAL D 2 1555 1555 1.41 LINK O4 BBGC E 1 C1 BGAL E 2 1555 1555 1.40 LINK O4 BBGC F 1 C1 BGAL F 2 1555 1555 1.39 LINK O4 BBGC G 1 C1 BGAL G 2 1555 1555 1.41 CISPEP 1 SER A 29 PRO A 30 0 -10.05 CISPEP 2 SER A 29 PRO A 30 0 -3.65 CISPEP 3 SER A 31 PRO A 32 0 0.47 CISPEP 4 SER A 77 PRO A 78 0 -4.51 CISPEP 5 ASP A 79 PRO A 80 0 -2.93 CRYST1 52.530 61.270 44.790 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019037 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016321 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022326 0.00000