HEADER RNA BINDING PROTEIN 06-OCT-22 8B9L TITLE CRYO-EM STRUCTURE OF MLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOSAGE COMPENSATION REGULATOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP-DEPENDENT RNA HELICASE MLE,PROTEIN MALE-LESS,PROTEIN COMPND 5 MALELESS,PROTEIN NO ACTION POTENTIAL; COMPND 6 EC: 3.6.4.13; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: MLE, NAP, CG11680; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS RNA HELICASE, DROSOPHILA DOSAGE COMPENSATION, RNA BINDING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR P.K.A.JAGTAP,J.HENNIG REVDAT 2 01-MAY-24 8B9L 1 JRNL REVDAT 1 18-OCT-23 8B9L 0 JRNL AUTH P.K.A.JAGTAP,M.MULLER,A.E.KISS,A.W.THOMAE,K.LAPOUGE,M.BECK, JRNL AUTH 2 P.B.BECKER,J.HENNIG JRNL TITL STRUCTURAL BASIS OF RNA-INDUCED AUTOREGULATION OF THE JRNL TITL 2 DEXH-TYPE RNA HELICASE MALELESS. JRNL REF MOL.CELL V. 83 4318 2023 JRNL REFN ISSN 1097-2765 JRNL PMID 37989319 JRNL DOI 10.1016/J.MOLCEL.2023.10.026 REMARK 2 REMARK 2 RESOLUTION. 3.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.450 REMARK 3 NUMBER OF PARTICLES : 270599 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8B9L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292125984. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MLE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.61 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5050.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ILE A 3 REMARK 465 LYS A 4 REMARK 465 SER A 5 REMARK 465 PHE A 6 REMARK 465 LEU A 7 REMARK 465 TYR A 8 REMARK 465 GLN A 9 REMARK 465 PHE A 10 REMARK 465 CYS A 11 REMARK 465 ALA A 12 REMARK 465 LYS A 13 REMARK 465 SER A 14 REMARK 465 GLN A 15 REMARK 465 ILE A 16 REMARK 465 GLU A 17 REMARK 465 PRO A 18 REMARK 465 LYS A 19 REMARK 465 PHE A 20 REMARK 465 ASP A 21 REMARK 465 ILE A 22 REMARK 465 ARG A 23 REMARK 465 GLN A 24 REMARK 465 THR A 25 REMARK 465 GLY A 26 REMARK 465 PRO A 27 REMARK 465 LYS A 28 REMARK 465 ASN A 29 REMARK 465 ARG A 30 REMARK 465 GLN A 31 REMARK 465 ARG A 32 REMARK 465 PHE A 33 REMARK 465 LEU A 34 REMARK 465 CYS A 35 REMARK 465 GLU A 36 REMARK 465 VAL A 37 REMARK 465 ARG A 38 REMARK 465 VAL A 39 REMARK 465 GLU A 40 REMARK 465 PRO A 41 REMARK 465 ASN A 42 REMARK 465 THR A 43 REMARK 465 TYR A 44 REMARK 465 ILE A 45 REMARK 465 GLY A 46 REMARK 465 VAL A 47 REMARK 465 GLY A 48 REMARK 465 ASN A 49 REMARK 465 SER A 50 REMARK 465 THR A 51 REMARK 465 ASN A 52 REMARK 465 LYS A 53 REMARK 465 LYS A 54 REMARK 465 ASP A 55 REMARK 465 ALA A 56 REMARK 465 GLU A 57 REMARK 465 LYS A 58 REMARK 465 ASN A 59 REMARK 465 ALA A 60 REMARK 465 CYS A 61 REMARK 465 ARG A 62 REMARK 465 ASP A 63 REMARK 465 PHE A 64 REMARK 465 VAL A 65 REMARK 465 ASN A 66 REMARK 465 TYR A 67 REMARK 465 LEU A 68 REMARK 465 VAL A 69 REMARK 465 ARG A 70 REMARK 465 VAL A 71 REMARK 465 GLY A 72 REMARK 465 LYS A 73 REMARK 465 LEU A 74 REMARK 465 ASN A 75 REMARK 465 THR A 76 REMARK 465 ASN A 77 REMARK 465 ASP A 78 REMARK 465 VAL A 79 REMARK 465 PRO A 80 REMARK 465 ALA A 81 REMARK 465 ASP A 82 REMARK 465 ALA A 83 REMARK 465 GLY A 84 REMARK 465 ALA A 85 REMARK 465 SER A 86 REMARK 465 GLY A 87 REMARK 465 GLY A 88 REMARK 465 GLY A 89 REMARK 465 PRO A 90 REMARK 465 ARG A 91 REMARK 465 THR A 92 REMARK 465 GLY A 93 REMARK 465 LEU A 94 REMARK 465 GLU A 95 REMARK 465 GLY A 96 REMARK 465 ALA A 97 REMARK 465 GLY A 98 REMARK 465 MET A 99 REMARK 465 ALA A 100 REMARK 465 GLY A 101 REMARK 465 GLY A 102 REMARK 465 SER A 103 REMARK 465 GLY A 104 REMARK 465 GLN A 105 REMARK 465 GLN A 106 REMARK 465 LYS A 107 REMARK 465 ARG A 108 REMARK 465 VAL A 109 REMARK 465 PHE A 110 REMARK 465 ASP A 111 REMARK 465 GLY A 112 REMARK 465 GLN A 113 REMARK 465 SER A 114 REMARK 465 GLY A 115 REMARK 465 PRO A 116 REMARK 465 GLN A 117 REMARK 465 ASP A 118 REMARK 465 LEU A 119 REMARK 465 GLY A 120 REMARK 465 GLU A 121 REMARK 465 ALA A 122 REMARK 465 TYR A 123 REMARK 465 ARG A 124 REMARK 465 PRO A 125 REMARK 465 LEU A 126 REMARK 465 ASN A 127 REMARK 465 HIS A 128 REMARK 465 ASP A 129 REMARK 465 GLY A 130 REMARK 465 GLY A 131 REMARK 465 ASP A 132 REMARK 465 GLY A 133 REMARK 465 GLY A 134 REMARK 465 ASN A 135 REMARK 465 ARG A 136 REMARK 465 TYR A 137 REMARK 465 SER A 138 REMARK 465 VAL A 139 REMARK 465 ILE A 140 REMARK 465 ASP A 141 REMARK 465 ARG A 142 REMARK 465 ILE A 143 REMARK 465 GLN A 144 REMARK 465 GLU A 145 REMARK 465 GLN A 146 REMARK 465 ARG A 147 REMARK 465 ASP A 148 REMARK 465 MET A 149 REMARK 465 ASN A 150 REMARK 465 GLU A 151 REMARK 465 ALA A 152 REMARK 465 GLU A 153 REMARK 465 ALA A 154 REMARK 465 PHE A 155 REMARK 465 ASP A 156 REMARK 465 VAL A 157 REMARK 465 ASN A 158 REMARK 465 ALA A 159 REMARK 465 ALA A 160 REMARK 465 ILE A 161 REMARK 465 HIS A 162 REMARK 465 GLY A 163 REMARK 465 ASN A 164 REMARK 465 TRP A 165 REMARK 465 THR A 166 REMARK 465 ILE A 167 REMARK 465 GLU A 168 REMARK 465 ASN A 169 REMARK 465 ALA A 170 REMARK 465 LYS A 171 REMARK 465 GLU A 172 REMARK 465 ARG A 173 REMARK 465 LEU A 174 REMARK 465 ASN A 175 REMARK 465 ILE A 176 REMARK 465 TYR A 177 REMARK 465 LYS A 178 REMARK 465 GLN A 179 REMARK 465 THR A 180 REMARK 465 ASN A 181 REMARK 465 ASN A 182 REMARK 465 ILE A 183 REMARK 465 ARG A 184 REMARK 465 ASP A 185 REMARK 465 ASP A 186 REMARK 465 TYR A 187 REMARK 465 LYS A 188 REMARK 465 TYR A 189 REMARK 465 THR A 190 REMARK 465 PRO A 191 REMARK 465 VAL A 192 REMARK 465 GLY A 193 REMARK 465 PRO A 194 REMARK 465 GLU A 195 REMARK 465 HIS A 196 REMARK 465 ALA A 197 REMARK 465 ARG A 198 REMARK 465 SER A 199 REMARK 465 PHE A 200 REMARK 465 LEU A 201 REMARK 465 ALA A 202 REMARK 465 GLU A 203 REMARK 465 LEU A 204 REMARK 465 SER A 205 REMARK 465 ILE A 206 REMARK 465 TYR A 207 REMARK 465 VAL A 208 REMARK 465 PRO A 209 REMARK 465 ALA A 210 REMARK 465 LEU A 211 REMARK 465 ASN A 212 REMARK 465 ARG A 213 REMARK 465 THR A 214 REMARK 465 VAL A 215 REMARK 465 THR A 216 REMARK 465 ALA A 217 REMARK 465 ARG A 218 REMARK 465 GLU A 219 REMARK 465 SER A 220 REMARK 465 GLY A 221 REMARK 465 SER A 222 REMARK 465 ASN A 223 REMARK 465 LYS A 224 REMARK 465 LYS A 225 REMARK 465 SER A 226 REMARK 465 ALA A 227 REMARK 465 SER A 228 REMARK 465 LYS A 229 REMARK 465 SER A 230 REMARK 465 CYS A 231 REMARK 465 ALA A 232 REMARK 465 LEU A 233 REMARK 465 SER A 234 REMARK 465 LEU A 235 REMARK 465 VAL A 236 REMARK 465 ARG A 237 REMARK 465 GLN A 238 REMARK 465 LEU A 239 REMARK 465 PHE A 240 REMARK 465 HIS A 241 REMARK 465 LEU A 242 REMARK 465 ASN A 243 REMARK 465 VAL A 244 REMARK 465 ILE A 245 REMARK 465 GLU A 246 REMARK 465 PRO A 247 REMARK 465 PHE A 248 REMARK 465 SER A 249 REMARK 465 GLY A 250 REMARK 465 THR A 251 REMARK 465 LEU A 252 REMARK 465 LYS A 253 REMARK 465 LYS A 254 REMARK 465 LYS A 255 REMARK 465 LYS A 256 REMARK 465 LYS A 293 REMARK 465 ILE A 294 REMARK 465 GLU A 295 REMARK 465 LEU A 296 REMARK 465 ASP A 297 REMARK 465 GLY A 298 REMARK 465 PRO A 299 REMARK 465 PRO A 300 REMARK 465 ILE A 301 REMARK 465 PRO A 302 REMARK 465 LEU A 303 REMARK 465 ILE A 304 REMARK 465 VAL A 305 REMARK 465 ASN A 306 REMARK 465 LEU A 307 REMARK 465 SER A 308 REMARK 465 ARG A 309 REMARK 465 ILE A 310 REMARK 465 ASP A 311 REMARK 465 SER A 312 REMARK 465 SER A 313 REMARK 465 GLN A 314 REMARK 465 GLN A 315 REMARK 465 ASP A 316 REMARK 465 GLY A 317 REMARK 465 GLU A 318 REMARK 465 LYS A 319 REMARK 465 ARG A 320 REMARK 465 GLN A 321 REMARK 465 GLU A 602 REMARK 465 ASP A 603 REMARK 465 LYS A 604 REMARK 465 ASP A 605 REMARK 465 GLU A 606 REMARK 465 ASP A 1153 REMARK 465 PHE A 1154 REMARK 465 GLY A 1155 REMARK 465 LEU A 1156 REMARK 465 GLN A 1157 REMARK 465 ARG A 1158 REMARK 465 GLU A 1159 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 258 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 1070 OE1 GLN A 1073 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 771 CA - C - O ANGL. DEV. = 14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 261 -79.06 99.20 REMARK 500 LYS A 266 141.57 -172.31 REMARK 500 PRO A 289 49.93 -72.63 REMARK 500 ILE A 343 -86.36 44.45 REMARK 500 ASP A 344 129.21 70.25 REMARK 500 GLU A 345 142.11 70.77 REMARK 500 PHE A 471 -8.21 73.63 REMARK 500 THR A 541 115.51 -161.07 REMARK 500 ILE A 553 100.54 65.40 REMARK 500 MET A 629 35.78 -95.59 REMARK 500 GLU A 708 -95.69 56.07 REMARK 500 ALA A 720 38.06 -99.09 REMARK 500 SER A 723 -3.26 73.30 REMARK 500 THR A 725 -9.13 70.83 REMARK 500 ILE A 726 -83.91 32.05 REMARK 500 CYS A 736 30.84 71.44 REMARK 500 PHE A 743 167.27 60.24 REMARK 500 SER A 745 -167.25 62.16 REMARK 500 ASN A 748 -14.87 71.94 REMARK 500 LEU A 749 -8.66 62.00 REMARK 500 VAL A 772 -51.16 -126.59 REMARK 500 ASP A 850 0.83 57.79 REMARK 500 GLU A 851 35.61 158.57 REMARK 500 LEU A 852 -71.10 -83.17 REMARK 500 LEU A 855 -121.11 56.73 REMARK 500 ARG A 857 -167.07 -167.58 REMARK 500 PRO A 863 43.82 -81.74 REMARK 500 HIS A 910 47.81 -85.82 REMARK 500 LEU A 952 69.76 60.42 REMARK 500 ASP A 994 76.70 -160.31 REMARK 500 PRO A1010 41.67 -108.99 REMARK 500 LYS A1016 -61.26 -92.29 REMARK 500 GLU A1017 146.05 -171.55 REMARK 500 LYS A1018 -100.32 55.92 REMARK 500 SER A1079 -95.30 49.48 REMARK 500 ARG A1080 -168.77 56.02 REMARK 500 ASN A1088 17.40 57.17 REMARK 500 ASP A1093 15.03 56.97 REMARK 500 ASN A1094 -61.59 62.05 REMARK 500 ASN A1097 134.53 -171.84 REMARK 500 GLU A1101 78.34 55.14 REMARK 500 PRO A1102 -19.31 -44.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 1097 PHE A 1098 147.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 771 0.30 SIDE CHAIN REMARK 500 ARG A 773 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 770 17.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-15935 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF MLE DBREF 8B9L A 1 1159 UNP P24785 MLE_DROME 1 1159 SEQRES 1 A 1159 MET ASP ILE LYS SER PHE LEU TYR GLN PHE CYS ALA LYS SEQRES 2 A 1159 SER GLN ILE GLU PRO LYS PHE ASP ILE ARG GLN THR GLY SEQRES 3 A 1159 PRO LYS ASN ARG GLN ARG PHE LEU CYS GLU VAL ARG VAL SEQRES 4 A 1159 GLU PRO ASN THR TYR ILE GLY VAL GLY ASN SER THR ASN SEQRES 5 A 1159 LYS LYS ASP ALA GLU LYS ASN ALA CYS ARG ASP PHE VAL SEQRES 6 A 1159 ASN TYR LEU VAL ARG VAL GLY LYS LEU ASN THR ASN ASP SEQRES 7 A 1159 VAL PRO ALA ASP ALA GLY ALA SER GLY GLY GLY PRO ARG SEQRES 8 A 1159 THR GLY LEU GLU GLY ALA GLY MET ALA GLY GLY SER GLY SEQRES 9 A 1159 GLN GLN LYS ARG VAL PHE ASP GLY GLN SER GLY PRO GLN SEQRES 10 A 1159 ASP LEU GLY GLU ALA TYR ARG PRO LEU ASN HIS ASP GLY SEQRES 11 A 1159 GLY ASP GLY GLY ASN ARG TYR SER VAL ILE ASP ARG ILE SEQRES 12 A 1159 GLN GLU GLN ARG ASP MET ASN GLU ALA GLU ALA PHE ASP SEQRES 13 A 1159 VAL ASN ALA ALA ILE HIS GLY ASN TRP THR ILE GLU ASN SEQRES 14 A 1159 ALA LYS GLU ARG LEU ASN ILE TYR LYS GLN THR ASN ASN SEQRES 15 A 1159 ILE ARG ASP ASP TYR LYS TYR THR PRO VAL GLY PRO GLU SEQRES 16 A 1159 HIS ALA ARG SER PHE LEU ALA GLU LEU SER ILE TYR VAL SEQRES 17 A 1159 PRO ALA LEU ASN ARG THR VAL THR ALA ARG GLU SER GLY SEQRES 18 A 1159 SER ASN LYS LYS SER ALA SER LYS SER CYS ALA LEU SER SEQRES 19 A 1159 LEU VAL ARG GLN LEU PHE HIS LEU ASN VAL ILE GLU PRO SEQRES 20 A 1159 PHE SER GLY THR LEU LYS LYS LYS LYS ASP GLU GLN LEU SEQRES 21 A 1159 LYS PRO TYR PRO VAL LYS LEU SER PRO ASN LEU ILE ASN SEQRES 22 A 1159 LYS ILE ASP GLU VAL ILE LYS GLY LEU ASP LEU PRO VAL SEQRES 23 A 1159 VAL ASN PRO ARG ASN ILE LYS ILE GLU LEU ASP GLY PRO SEQRES 24 A 1159 PRO ILE PRO LEU ILE VAL ASN LEU SER ARG ILE ASP SER SEQRES 25 A 1159 SER GLN GLN ASP GLY GLU LYS ARG GLN GLU SER SER VAL SEQRES 26 A 1159 ILE PRO TRP ALA PRO PRO GLN ALA ASN TRP ASN THR TRP SEQRES 27 A 1159 HIS ALA CYS ASN ILE ASP GLU GLY GLU LEU ALA THR THR SEQRES 28 A 1159 SER ILE ASP ASP LEU SER MET ASP TYR GLU ARG SER LEU SEQRES 29 A 1159 ARG ASP ARG ARG GLN ASN ASP ASN GLU TYR ARG GLN PHE SEQRES 30 A 1159 LEU GLU PHE ARG GLU LYS LEU PRO ILE ALA ALA MET ARG SEQRES 31 A 1159 SER GLU ILE LEU THR ALA ILE ASN ASP ASN PRO VAL VAL SEQRES 32 A 1159 ILE ILE ARG GLY ASN THR GLY CYS GLY LYS THR THR GLN SEQRES 33 A 1159 ILE ALA GLN TYR ILE LEU ASP ASP TYR ILE CYS SER GLY SEQRES 34 A 1159 GLN GLY GLY TYR ALA ASN ILE TYR VAL THR GLN PRO ARG SEQRES 35 A 1159 ARG ILE SER ALA ILE SER VAL ALA GLU ARG VAL ALA ARG SEQRES 36 A 1159 GLU ARG CYS GLU GLN LEU GLY ASP THR VAL GLY TYR SER SEQRES 37 A 1159 VAL ARG PHE GLU SER VAL PHE PRO ARG PRO TYR GLY ALA SEQRES 38 A 1159 ILE LEU PHE CYS THR VAL GLY VAL LEU LEU ARG LYS LEU SEQRES 39 A 1159 GLU ALA GLY LEU ARG GLY VAL SER HIS ILE ILE VAL ASP SEQRES 40 A 1159 GLU ILE HIS GLU ARG ASP VAL ASN SER ASP PHE LEU LEU SEQRES 41 A 1159 VAL ILE LEU ARG ASP MET VAL ASP THR TYR PRO ASP LEU SEQRES 42 A 1159 HIS VAL ILE LEU MET SER ALA THR ILE ASP THR THR LYS SEQRES 43 A 1159 PHE SER LYS TYR PHE GLY ILE CYS PRO VAL LEU GLU VAL SEQRES 44 A 1159 PRO GLY ARG ALA PHE PRO VAL GLN GLN PHE PHE LEU GLU SEQRES 45 A 1159 ASP ILE ILE GLN MET THR ASP PHE VAL PRO SER ALA GLU SEQRES 46 A 1159 SER ARG ARG LYS ARG LYS GLU VAL GLU ASP GLU GLU GLN SEQRES 47 A 1159 LEU LEU SER GLU ASP LYS ASP GLU ALA GLU ILE ASN TYR SEQRES 48 A 1159 ASN LYS VAL CYS GLU ASP LYS TYR SER GLN LYS THR ARG SEQRES 49 A 1159 ASN ALA MET ALA MET LEU SER GLU SER ASP VAL SER PHE SEQRES 50 A 1159 GLU LEU LEU GLU ALA LEU LEU MET HIS ILE LYS SER LYS SEQRES 51 A 1159 ASN ILE PRO GLY ALA ILE LEU VAL PHE LEU PRO GLY TRP SEQRES 52 A 1159 ASN LEU ILE PHE ALA LEU MET LYS PHE LEU GLN ASN THR SEQRES 53 A 1159 ASN ILE PHE GLY ASP THR SER GLN TYR GLN ILE LEU PRO SEQRES 54 A 1159 CYS HIS SER GLN ILE PRO ARG ASP GLU GLN ARG LYS VAL SEQRES 55 A 1159 PHE GLU PRO VAL PRO GLU GLY VAL THR LYS ILE ILE LEU SEQRES 56 A 1159 SER THR ASN ILE ALA GLU THR SER ILE THR ILE ASP ASP SEQRES 57 A 1159 ILE VAL PHE VAL ILE ASP ILE CYS LYS ALA ARG MET LYS SEQRES 58 A 1159 LEU PHE THR SER HIS ASN ASN LEU THR SER TYR ALA THR SEQRES 59 A 1159 VAL TRP ALA SER LYS THR ASN LEU GLU GLN ARG LYS GLY SEQRES 60 A 1159 ARG ALA GLY ARG VAL ARG PRO GLY PHE CYS PHE THR LEU SEQRES 61 A 1159 CYS SER ARG ALA ARG PHE GLN ALA LEU GLU ASP ASN LEU SEQRES 62 A 1159 THR PRO GLU MET PHE ARG THR PRO LEU HIS GLU MET ALA SEQRES 63 A 1159 LEU THR ILE LYS LEU LEU ARG LEU GLY SER ILE HIS HIS SEQRES 64 A 1159 PHE LEU SER LYS ALA LEU GLU PRO PRO PRO VAL ASP ALA SEQRES 65 A 1159 VAL ILE GLU ALA GLU VAL LEU LEU ARG GLU MET ARG CYS SEQRES 66 A 1159 LEU ASP ALA ASN ASP GLU LEU THR PRO LEU GLY ARG LEU SEQRES 67 A 1159 LEU ALA ARG LEU PRO ILE GLU PRO ARG LEU GLY LYS MET SEQRES 68 A 1159 MET VAL LEU GLY ALA VAL PHE GLY CYS ALA ASP LEU MET SEQRES 69 A 1159 ALA ILE MET ALA SER TYR SER SER THR PHE SER GLU VAL SEQRES 70 A 1159 PHE SER LEU ASP ILE GLY GLN ARG ARG LEU ALA ASN HIS SEQRES 71 A 1159 GLN LYS ALA LEU SER GLY THR LYS CYS SER ASP HIS VAL SEQRES 72 A 1159 ALA MET ILE VAL ALA SER GLN MET TRP ARG ARG GLU LYS SEQRES 73 A 1159 GLN ARG GLY GLU HIS MET GLU ALA ARG PHE CYS ASP TRP SEQRES 74 A 1159 LYS GLY LEU GLN MET SER THR MET ASN VAL ILE TRP ASP SEQRES 75 A 1159 ALA LYS GLN GLN LEU LEU ASP LEU LEU GLN GLN ALA GLY SEQRES 76 A 1159 PHE PRO GLU GLU CYS MET ILE SER HIS GLU VAL ASP GLU SEQRES 77 A 1159 ARG ILE ASP GLY ASP ASP PRO VAL LEU ASP VAL SER LEU SEQRES 78 A 1159 ALA LEU LEU CYS LEU GLY LEU TYR PRO ASN ILE CYS VAL SEQRES 79 A 1159 HIS LYS GLU LYS ARG LYS VAL LEU THR THR GLU SER LYS SEQRES 80 A 1159 ALA ALA LEU LEU HIS LYS THR SER VAL ASN CYS SER ASN SEQRES 81 A 1159 LEU ALA VAL THR PHE PRO TYR PRO PHE PHE VAL PHE GLY SEQRES 82 A 1159 GLU LYS ILE ARG THR ARG ALA VAL SER CYS LYS GLN LEU SEQRES 83 A 1159 SER MET VAL SER PRO LEU GLN VAL ILE LEU PHE GLY SER SEQRES 84 A 1159 ARG LYS ILE ASP LEU ALA ALA ASN ASN ILE VAL ARG VAL SEQRES 85 A 1159 ASP ASN TRP LEU ASN PHE ASP ILE GLU PRO GLU LEU ALA SEQRES 86 A 1159 ALA LYS ILE GLY ALA LEU LYS PRO ALA LEU GLU ASP LEU SEQRES 87 A 1159 ILE THR VAL ALA CYS ASP ASN PRO SER ASP ILE LEU ARG SEQRES 88 A 1159 LEU GLU GLU PRO TYR ALA GLN LEU VAL LYS VAL VAL LYS SEQRES 89 A 1159 ASP LEU CYS VAL LYS SER ALA GLY ASP PHE GLY LEU GLN SEQRES 90 A 1159 ARG GLU HELIX 1 AA1 SER A 268 LEU A 282 1 15 HELIX 2 AA2 GLY A 346 THR A 350 5 5 HELIX 3 AA3 SER A 352 ASP A 371 1 20 HELIX 4 AA4 ASP A 371 LYS A 383 1 13 HELIX 5 AA5 LEU A 384 MET A 389 1 6 HELIX 6 AA6 MET A 389 ASN A 400 1 12 HELIX 7 AA7 LYS A 413 SER A 428 1 16 HELIX 8 AA8 GLN A 430 TYR A 433 5 4 HELIX 9 AA9 ARG A 442 ARG A 457 1 16 HELIX 10 AB1 THR A 486 LEU A 494 1 9 HELIX 11 AB2 GLU A 495 GLY A 497 5 3 HELIX 12 AB3 GLU A 508 ARG A 512 5 5 HELIX 13 AB4 ASP A 513 TYR A 530 1 18 HELIX 14 AB5 ASP A 543 TYR A 550 1 8 HELIX 15 AB6 PHE A 570 ASP A 579 1 10 HELIX 16 AB7 SER A 583 GLN A 598 1 16 HELIX 17 AB8 ASN A 610 VAL A 614 5 5 HELIX 18 AB9 SER A 620 MET A 629 1 10 HELIX 19 AC1 SER A 636 ASN A 651 1 16 HELIX 20 AC2 GLY A 662 THR A 676 1 15 HELIX 21 AC3 PRO A 695 GLU A 704 1 10 HELIX 22 AC4 ASN A 718 THR A 722 5 5 HELIX 23 AC5 SER A 758 ALA A 769 1 12 HELIX 24 AC6 SER A 782 ALA A 788 1 7 HELIX 25 AC7 PRO A 795 THR A 800 5 6 HELIX 26 AC8 LEU A 802 LEU A 812 1 11 HELIX 27 AC9 SER A 816 LYS A 823 1 8 HELIX 28 AD1 PRO A 829 MET A 843 1 15 HELIX 29 AD2 GLU A 865 PHE A 878 1 14 HELIX 30 AD3 CYS A 880 THR A 893 1 14 HELIX 31 AD4 ALA A 908 LYS A 912 5 5 HELIX 32 AD5 SER A 915 CYS A 919 5 5 HELIX 33 AD6 SER A 920 ARG A 938 1 19 HELIX 34 AD7 GLU A 940 CYS A 947 1 8 HELIX 35 AD8 GLN A 953 ALA A 974 1 22 HELIX 36 AD9 PRO A 977 ILE A 982 5 6 HELIX 37 AE1 ASP A 994 LEU A 1008 1 15 HELIX 38 AE2 THR A 1024 SER A 1026 5 3 HELIX 39 AE3 SER A 1070 SER A 1079 1 10 HELIX 40 AE4 GLU A 1101 ASN A 1125 1 25 HELIX 41 AE5 GLU A 1133 CYS A 1147 1 15 SHEET 1 AA1 8 GLU A 472 SER A 473 0 SHEET 2 AA1 8 VAL A 465 VAL A 469 -1 N VAL A 469 O GLU A 472 SHEET 3 AA1 8 ALA A 481 CYS A 485 1 O PHE A 484 N GLY A 466 SHEET 4 AA1 8 ASN A 435 THR A 439 1 N VAL A 438 O CYS A 485 SHEET 5 AA1 8 HIS A 503 VAL A 506 1 O ILE A 505 N TYR A 437 SHEET 6 AA1 8 HIS A 534 SER A 539 1 O ILE A 536 N ILE A 504 SHEET 7 AA1 8 VAL A 402 ARG A 406 1 N VAL A 403 O LEU A 537 SHEET 8 AA1 8 VAL A 556 GLU A 558 1 O LEU A 557 N ARG A 406 SHEET 1 AA2 5 GLN A 567 GLN A 568 0 SHEET 2 AA2 5 PHE A 776 THR A 779 1 O CYS A 777 N GLN A 567 SHEET 3 AA2 5 ILE A 729 ASP A 734 1 N VAL A 732 O PHE A 776 SHEET 4 AA2 5 ALA A 655 PHE A 659 1 N LEU A 657 O ILE A 733 SHEET 5 AA2 5 ILE A 713 SER A 716 1 O ILE A 714 N VAL A 658 SHEET 1 AA3 2 LYS A 737 ALA A 738 0 SHEET 2 AA3 2 VAL A 755 TRP A 756 -1 O VAL A 755 N ALA A 738 SHEET 1 AA4 6 SER A1062 CYS A1063 0 SHEET 2 AA4 6 LYS A1027 LEU A1031 1 N LEU A1030 O CYS A1063 SHEET 3 AA4 6 LYS A1020 THR A1023 -1 N THR A1023 O LYS A1027 SHEET 4 AA4 6 ILE A1012 GLU A1017 -1 N VAL A1014 O LEU A1022 SHEET 5 AA4 6 PHE A1049 VAL A1051 -1 O PHE A1050 N CYS A1013 SHEET 6 AA4 6 SER A1067 MET A1068 -1 O SER A1067 N VAL A1051 CISPEP 1 TYR A 1009 PRO A 1010 0 -2.79 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000