HEADER PROTEIN BINDING 10-OCT-22 8B9V TITLE CRYSTAL STRUCTURE OF LU AF82422 IN COMPLEX WITH ALPHA-SYNUCLEIN 110- TITLE 2 120 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LU AF82422 FAB LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LU AF82422 FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ALPHA-SYNUCLEIN 110-120; COMPND 11 CHAIN: A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS ANTIBODY, IMMUNOTHERAPY, ALPHA-SYNUCLEIN, NEURODEGENERATION, KEYWDS 2 PARKINSON'S DISEASE, MULTIPLE SYSTEM ATROPHY, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR K.BJERREGAARD-ANDERSEN,K.CARR,B.O.KROGH,P.KALLUNKI,L.TAGMOSE,L.DAVID REVDAT 1 25-OCT-23 8B9V 0 JRNL AUTH K.BJERREGAARD-ANDERSEN,L.DAVID JRNL TITL CRYSTAL STRUCTURE OF LU AF82422 IN COMPLEX WITH JRNL TITL 2 ALPHA-SYNUCLEIN 110-120 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 27585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.3300 - 4.6500 1.00 2724 125 0.1672 0.2045 REMARK 3 2 4.6500 - 3.6900 1.00 2638 133 0.1497 0.2093 REMARK 3 3 3.6900 - 3.2300 1.00 2641 132 0.1734 0.2462 REMARK 3 4 3.2300 - 2.9300 1.00 2594 158 0.1952 0.2556 REMARK 3 5 2.9300 - 2.7200 1.00 2625 132 0.2222 0.2841 REMARK 3 6 2.7200 - 2.5600 1.00 2597 128 0.2373 0.3015 REMARK 3 7 2.5600 - 2.4300 1.00 2628 150 0.2445 0.3223 REMARK 3 8 2.4300 - 2.3300 1.00 2581 134 0.2761 0.2842 REMARK 3 9 2.3300 - 2.2400 1.00 2603 150 0.2955 0.3418 REMARK 3 10 2.2400 - 2.1600 1.00 2579 133 0.3199 0.3661 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.345 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3335 REMARK 3 ANGLE : 0.988 4549 REMARK 3 CHIRALITY : 0.055 516 REMARK 3 PLANARITY : 0.005 587 REMARK 3 DIHEDRAL : 10.519 1970 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2234 -50.3911 -9.4558 REMARK 3 T TENSOR REMARK 3 T11: 0.3417 T22: 0.2922 REMARK 3 T33: 0.3150 T12: -0.0464 REMARK 3 T13: -0.0447 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.3418 L22: 0.6934 REMARK 3 L33: 0.4805 L12: -0.0407 REMARK 3 L13: -0.1400 L23: 0.0436 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: 0.1249 S13: -0.1803 REMARK 3 S21: 0.1973 S22: 0.1728 S23: -0.1577 REMARK 3 S31: 0.0269 S32: -0.1334 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 39 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8539 -48.3929 -11.0940 REMARK 3 T TENSOR REMARK 3 T11: 0.3258 T22: 0.2854 REMARK 3 T33: 0.3685 T12: -0.0421 REMARK 3 T13: -0.0911 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.4220 L22: 1.5993 REMARK 3 L33: 0.7397 L12: 0.3562 REMARK 3 L13: -0.5613 L23: -0.3527 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: 0.1301 S13: -0.1046 REMARK 3 S21: 0.3835 S22: -0.1036 S23: -0.3076 REMARK 3 S31: -0.0074 S32: 0.1163 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 103 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6151 -27.2229 17.4421 REMARK 3 T TENSOR REMARK 3 T11: 0.3135 T22: 0.2774 REMARK 3 T33: 0.2834 T12: 0.0646 REMARK 3 T13: 0.0216 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.2277 L22: 1.0918 REMARK 3 L33: 0.8440 L12: -0.0618 REMARK 3 L13: 0.3110 L23: 0.5051 REMARK 3 S TENSOR REMARK 3 S11: -0.0240 S12: -0.1281 S13: 0.1432 REMARK 3 S21: -0.1124 S22: 0.0339 S23: -0.1228 REMARK 3 S31: -0.0290 S32: -0.1450 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1864 -27.1049 -22.0954 REMARK 3 T TENSOR REMARK 3 T11: 0.2971 T22: 0.3497 REMARK 3 T33: 0.3089 T12: 0.0077 REMARK 3 T13: -0.0022 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 0.1506 L22: 0.3047 REMARK 3 L33: 0.9967 L12: -0.0099 REMARK 3 L13: 0.0412 L23: -0.2726 REMARK 3 S TENSOR REMARK 3 S11: -0.0512 S12: 0.1860 S13: 0.0394 REMARK 3 S21: -0.0446 S22: 0.0074 S23: -0.0887 REMARK 3 S31: -0.3460 S32: 0.0279 S33: 0.0009 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 34 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.2689 -34.3509 -23.5192 REMARK 3 T TENSOR REMARK 3 T11: 0.2250 T22: 0.4030 REMARK 3 T33: 0.2771 T12: -0.0047 REMARK 3 T13: 0.0171 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.4781 L22: 0.8586 REMARK 3 L33: 0.2654 L12: 0.1393 REMARK 3 L13: 0.2470 L23: -0.2484 REMARK 3 S TENSOR REMARK 3 S11: 0.0517 S12: 0.2349 S13: 0.0114 REMARK 3 S21: -0.0629 S22: 0.0149 S23: 0.0816 REMARK 3 S31: -0.2405 S32: -0.1447 S33: 0.0011 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 60 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4503 -27.7110 -20.3854 REMARK 3 T TENSOR REMARK 3 T11: 0.2647 T22: 0.3979 REMARK 3 T33: 0.2921 T12: 0.0239 REMARK 3 T13: 0.0058 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 0.3004 L22: 0.5723 REMARK 3 L33: 0.9921 L12: 0.2560 REMARK 3 L13: -0.3876 L23: 0.1096 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: 0.3670 S13: 0.1034 REMARK 3 S21: 0.0683 S22: 0.0346 S23: 0.0468 REMARK 3 S31: -0.0694 S32: -0.2638 S33: -0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 120 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9791 -17.8790 13.1708 REMARK 3 T TENSOR REMARK 3 T11: 0.4255 T22: 0.2925 REMARK 3 T33: 0.3615 T12: 0.0367 REMARK 3 T13: 0.0304 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.1942 L22: 0.2467 REMARK 3 L33: 0.3621 L12: 0.0205 REMARK 3 L13: -0.0192 L23: 0.3001 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: -0.1814 S13: -0.0370 REMARK 3 S21: 0.0564 S22: 0.0547 S23: -0.0944 REMARK 3 S31: -0.1928 S32: -0.1533 S33: -0.0004 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 146 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5023 -19.2145 7.3184 REMARK 3 T TENSOR REMARK 3 T11: 0.2976 T22: 0.2547 REMARK 3 T33: 0.3158 T12: 0.0057 REMARK 3 T13: 0.0184 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.3107 L22: 0.7618 REMARK 3 L33: 0.8478 L12: -0.4669 REMARK 3 L13: -0.3449 L23: 0.2634 REMARK 3 S TENSOR REMARK 3 S11: 0.0535 S12: -0.0285 S13: 0.1897 REMARK 3 S21: -0.1983 S22: 0.0278 S23: -0.1686 REMARK 3 S31: -0.1849 S32: 0.1945 S33: 0.0009 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -3 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6143 -45.3582 -30.6528 REMARK 3 T TENSOR REMARK 3 T11: 0.4641 T22: 0.4885 REMARK 3 T33: 0.4457 T12: -0.0731 REMARK 3 T13: -0.0104 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 0.0489 L22: 0.0952 REMARK 3 L33: 0.0323 L12: 0.0698 REMARK 3 L13: 0.0426 L23: 0.0564 REMARK 3 S TENSOR REMARK 3 S11: -0.0647 S12: 0.4899 S13: -0.3848 REMARK 3 S21: -0.4552 S22: 0.3627 S23: 0.0708 REMARK 3 S31: 0.2380 S32: 0.2088 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8B9V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292125786. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27590 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 44.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.93400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 2VYR, 2RCJ, 4NP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.0, 2 MM ZNCL2, 18% W/V REMARK 280 PEG 6000, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.23000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.23000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN L 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG L 77 CG CD NE CZ NH1 NH2 REMARK 470 LYS L 107 CG CD CE NZ REMARK 470 LYS L 126 CG CD CE NZ REMARK 470 LYS L 145 CG CD CE NZ REMARK 470 LYS L 190 CG CD CE NZ REMARK 470 LYS H 117 CG CD CE NZ REMARK 470 ARG H 210 CG CD NE CZ NH1 NH2 REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 ASP A 7 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH L 442 O HOH L 497 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA L 51 -38.10 68.70 REMARK 500 ASN L 138 74.73 49.02 REMARK 500 LYS L 190 -60.87 -104.12 REMARK 500 ASN H 95 160.37 95.33 REMARK 500 ALA H 97 146.35 176.94 REMARK 500 ASP H 144 61.37 68.45 REMARK 500 PHE H 146 134.07 -173.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU L 1 N REMARK 620 2 ASP L 185 OD1 95.5 REMARK 620 3 HIS L 189 NE2 92.4 3.1 REMARK 620 4 HOH L 487 O 95.1 3.0 3.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU L 81 OE1 REMARK 620 2 GLU L 81 OE1 0.0 REMARK 620 3 GLU L 81 OE2 49.5 49.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN L 137 OD1 REMARK 620 2 ASN L 138 OD1 76.4 REMARK 620 3 GLU H 1 OE2 142.2 108.2 REMARK 620 4 HIS H 164 NE2 94.7 88.3 49.2 REMARK 620 5 HOH H 304 O 87.4 162.5 88.5 99.4 REMARK 620 6 HOH H 317 O 171.4 100.3 31.0 77.2 96.7 REMARK 620 N 1 2 3 4 5 DBREF 8B9V L 1 214 PDB 8B9V 8B9V 1 214 DBREF 8B9V H 1 214 PDB 8B9V 8B9V 1 214 DBREF 8B9V A -3 7 PDB 8B9V 8B9V -3 7 SEQRES 1 L 215 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 215 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 215 GLN SER VAL SER SER SER TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 L 215 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 215 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 L 215 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 215 TYR GLY SER SER PRO TRP THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 217 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 217 THR GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 217 PHE THR PHE SER SER TYR ALA MET THR TRP VAL ARG GLN SEQRES 4 H 217 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ALA ILE ARG SEQRES 5 H 217 SER GLN GLY ASP ARG THR ASP TYR ALA ASP SER VAL LYS SEQRES 6 H 217 GLY ARG PHE THR ILE SER ARG ASP ASN SER GLN ASN THR SEQRES 7 H 217 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 217 ALA VAL TYR TYR CYS ALA LYS ASN TRP ALA PRO PHE ASP SEQRES 9 H 217 SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 10 H 217 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 H 217 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 H 217 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 H 217 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 H 217 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 H 217 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 H 217 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 H 217 LYS VAL ASP LYS ARG VAL GLU PRO LYS SEQRES 1 A 11 ALA GLU GLY ILE LEU GLU ASP MET PRO VAL ASP HET ZN L 301 1 HET ZN L 302 1 HET ZN L 303 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *146(H2 O) HELIX 1 AA1 VAL L 28 SER L 31 5 4 HELIX 2 AA2 GLU L 79 PHE L 83 5 5 HELIX 3 AA3 SER L 121 SER L 127 1 7 HELIX 4 AA4 LYS L 183 HIS L 189 1 7 HELIX 5 AA5 THR H 28 TYR H 32 5 5 HELIX 6 AA6 ASP H 61 LYS H 64 5 4 HELIX 7 AA7 ARG H 83 THR H 87 5 5 HELIX 8 AA8 SER H 156 ALA H 158 5 3 HELIX 9 AA9 SER H 187 LEU H 189 5 3 HELIX 10 AB1 LYS H 201 ASN H 204 5 4 SHEET 1 AA1 4 LEU L 4 SER L 7 0 SHEET 2 AA1 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA1 4 ASP L 70 ILE L 75 -1 O ILE L 75 N ALA L 19 SHEET 4 AA1 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA2 6 THR L 10 LEU L 13 0 SHEET 2 AA2 6 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AA2 6 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA2 6 LEU L 33 GLN L 38 -1 N ALA L 34 O GLN L 89 SHEET 5 AA2 6 ARG L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA2 6 SER L 53 ARG L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AA3 4 THR L 10 LEU L 13 0 SHEET 2 AA3 4 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AA3 4 VAL L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AA3 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AA4 4 SER L 114 PHE L 118 0 SHEET 2 AA4 4 THR L 129 PHE L 139 -1 O VAL L 133 N PHE L 118 SHEET 3 AA4 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AA4 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AA5 4 ALA L 153 LEU L 154 0 SHEET 2 AA5 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AA5 4 VAL L 191 THR L 197 -1 O THR L 197 N LYS L 145 SHEET 4 AA5 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AA6 4 GLN H 3 SER H 7 0 SHEET 2 AA6 4 LEU H 18 SER H 25 -1 O ALA H 23 N LEU H 5 SHEET 3 AA6 4 THR H 77 MET H 82 -1 O LEU H 80 N LEU H 20 SHEET 4 AA6 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA7 6 LEU H 11 VAL H 12 0 SHEET 2 AA7 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA7 6 ALA H 88 LYS H 94 -1 N TYR H 90 O THR H 107 SHEET 4 AA7 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA7 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA7 6 THR H 57 TYR H 59 -1 O ASP H 58 N ALA H 50 SHEET 1 AA8 4 SER H 120 LEU H 124 0 SHEET 2 AA8 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA8 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA8 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA9 4 SER H 120 LEU H 124 0 SHEET 2 AA9 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA9 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA9 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB1 3 THR H 151 TRP H 154 0 SHEET 2 AB1 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AB1 3 THR H 205 ARG H 210 -1 O VAL H 207 N VAL H 198 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.11 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.02 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 4 CYS H 140 CYS H 196 1555 1555 2.05 LINK N GLU L 1 ZN ZN L 302 1555 4445 2.08 LINK OE1 GLU L 81 ZN ZN L 303 1555 1555 2.57 LINK OE1 GLU L 81 ZN ZN L 303 1555 2555 2.62 LINK OE2 GLU L 81 ZN ZN L 303 1555 2555 2.70 LINK OD1 ASN L 137 ZN ZN L 301 1555 1555 2.41 LINK OD1 ASN L 138 ZN ZN L 301 1555 1555 1.97 LINK OD1 ASP L 185 ZN ZN L 302 1555 1555 1.86 LINK NE2 HIS L 189 ZN ZN L 302 1555 1555 2.16 LINK ZN ZN L 301 OE2 GLU H 1 2555 1555 2.64 LINK ZN ZN L 301 NE2 HIS H 164 1555 1555 2.36 LINK ZN ZN L 301 O HOH H 304 1555 1555 2.38 LINK ZN ZN L 301 O HOH H 317 1555 2555 2.40 LINK ZN ZN L 302 O HOH L 487 1555 1555 2.39 CISPEP 1 SER L 7 PRO L 8 0 -2.29 CISPEP 2 SER L 94 PRO L 95 0 0.52 CISPEP 3 TYR L 140 PRO L 141 0 -0.09 CISPEP 4 ALA H 97 PRO H 98 0 -11.49 CISPEP 5 PHE H 146 PRO H 147 0 -2.68 CISPEP 6 GLU H 148 PRO H 149 0 -0.91 CRYST1 132.460 59.050 69.080 90.00 106.66 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007549 0.000000 0.002259 0.00000 SCALE2 0.000000 0.016935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015110 0.00000