HEADER HYDROLASE 14-OCT-22 8BBX TITLE STRUCTURE OF PROLYL ENDOPROTEASE FROM ASPERGILLUS NIGER CBS 109712 IN TITLE 2 SPACE GROUP C222(1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPROTEASE ENDO-PRO; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIGER; SOURCE 3 ORGANISM_TAXID: 5061; SOURCE 4 GENE: ATWU_08740; SOURCE 5 EXPRESSION_SYSTEM: ASPERGILLUS NIGER; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5061; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: CBS 109712 KEYWDS ENDOPROTEASE, PROLINE-SPECIFIC, S28 PEPTIDASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.PIJNING,A.VUJICIC-ZAGAR,J.M.VAN DER LAAN,R.M.DE JONG,B.W.DIJKSTRA REVDAT 3 10-JAN-24 8BBX 1 JRNL REVDAT 2 27-DEC-23 8BBX 1 JRNL REVDAT 1 20-DEC-23 8BBX 0 JRNL AUTH T.PIJNING,A.VUJICIC-ZAGAR,J.M.VAN DER LAAN,R.M.DE JONG, JRNL AUTH 2 C.RAMIREZ-PALACIOS,A.VENTE,L.EDENS,B.W.DIJKSTRA JRNL TITL STRUCTURAL AND TIME-RESOLVED MECHANISTIC INVESTIGATIONS OF JRNL TITL 2 PROTEIN HYDROLYSIS BY THE ACIDIC PROLINE-SPECIFIC JRNL TITL 3 ENDOPROTEASE FROM ASPERGILLUS NIGER. JRNL REF PROTEIN SCI. V. 33 E4856 2024 JRNL REFN ESSN 1469-896X JRNL PMID 38059672 JRNL DOI 10.1002/PRO.4856 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 42704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2144 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3900 - 6.6500 1.00 2868 138 0.1856 0.2297 REMARK 3 2 6.6500 - 5.2800 1.00 2763 158 0.1712 0.1899 REMARK 3 3 5.2800 - 4.6200 1.00 2727 142 0.1525 0.2211 REMARK 3 4 4.6200 - 4.1900 1.00 2715 151 0.1513 0.1874 REMARK 3 5 4.1900 - 3.8900 1.00 2684 154 0.1790 0.2442 REMARK 3 6 3.8900 - 3.6600 1.00 2731 136 0.1928 0.2588 REMARK 3 7 3.6600 - 3.4800 1.00 2710 125 0.2098 0.2786 REMARK 3 8 3.4800 - 3.3300 1.00 2691 152 0.2272 0.2791 REMARK 3 9 3.3300 - 3.2000 1.00 2685 145 0.2491 0.3099 REMARK 3 10 3.2000 - 3.0900 1.00 2689 130 0.2517 0.2671 REMARK 3 11 3.0900 - 2.9900 1.00 2682 141 0.2491 0.3416 REMARK 3 12 2.9900 - 2.9100 1.00 2655 150 0.2597 0.3103 REMARK 3 13 2.9100 - 2.8300 0.99 2665 123 0.2700 0.3598 REMARK 3 14 2.8300 - 2.7600 0.99 2648 161 0.3143 0.3520 REMARK 3 15 2.7600 - 2.7000 0.99 2647 138 0.3442 0.3996 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.442 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.464 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 8362 REMARK 3 ANGLE : 1.163 11447 REMARK 3 CHIRALITY : 0.059 1268 REMARK 3 PLANARITY : 0.008 1435 REMARK 3 DIHEDRAL : 9.916 1325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'A' REMARK 3 SELECTION : (CHAIN 'B' AND RESID 43 THROUGH 525) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN 'C' REMARK 3 SELECTION : CHAIN 'E' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN 'C' REMARK 3 SELECTION : CHAIN 'F' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN 'C' REMARK 3 SELECTION : CHAIN 'G' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: CHAIN 'C' REMARK 3 SELECTION : CHAIN 'H' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 5 REMARK 3 REFERENCE SELECTION: CHAIN 'C' REMARK 3 SELECTION : CHAIN 'I' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 6 REMARK 3 REFERENCE SELECTION: CHAIN 'C' REMARK 3 SELECTION : CHAIN 'K' REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'D' AND (RESID 2 OR RESID 5 REMARK 3 THROUGH 10)) REMARK 3 SELECTION : (CHAIN 'J' AND (RESID 1 OR RESID 4 REMARK 3 THROUGH 9)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BBX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292125952. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42923 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 49.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8B57 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28-32% (W/V) PEG 3000, 0.1 M SODIUM REMARK 280 CITRATE BUFFER PH 5.25, PH 6.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 96.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.08500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 78.10300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 51.08500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 78.10300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 96.70000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.08500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 78.10300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 96.70000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 51.08500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 78.10300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G, H, I, J, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 42 REMARK 465 ALA A 526 REMARK 465 ALA B 526 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 446 O5 NAG I 1 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 59 CA - CB - CG ANGL. DEV. = -14.7 DEGREES REMARK 500 GLU A 101 CA - CB - CG ANGL. DEV. = -24.1 DEGREES REMARK 500 ARG B 121 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 58 -9.80 -59.61 REMARK 500 GLU A 88 39.77 -72.37 REMARK 500 THR A 155 -18.22 -141.96 REMARK 500 ASP A 161 87.82 -168.20 REMARK 500 SER A 179 -131.51 55.10 REMARK 500 THR A 195 -60.82 -100.74 REMARK 500 TYR A 212 58.66 -95.54 REMARK 500 ASP A 266 -65.72 -22.51 REMARK 500 ASP A 283 156.57 176.94 REMARK 500 VAL A 348 18.35 -142.01 REMARK 500 PHE A 384 -80.35 62.47 REMARK 500 PRO A 391 -177.82 -64.37 REMARK 500 VAL A 402 92.78 -68.40 REMARK 500 LEU A 475 131.64 -39.76 REMARK 500 PHE A 490 -148.72 -110.60 REMARK 500 CYS A 492 54.78 30.90 REMARK 500 GLU B 88 38.11 -72.29 REMARK 500 ASP B 161 86.99 -168.69 REMARK 500 SER B 179 -129.20 51.08 REMARK 500 TYR B 212 59.57 -94.48 REMARK 500 ASP B 266 -68.00 -19.88 REMARK 500 ASP B 283 158.53 179.03 REMARK 500 VAL B 348 20.57 -140.81 REMARK 500 PHE B 384 -82.44 62.35 REMARK 500 VAL B 402 90.44 -64.32 REMARK 500 PHE B 490 -149.09 -105.90 REMARK 500 CYS B 492 54.79 35.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8B57 RELATED DB: PDB REMARK 900 THE SAME PROTEIN CRYSTALLIZED IN A DIFFERENT SPACE GROUP DBREF1 8BBX A 42 526 UNP A0A8H3Y1T9_ASPTU DBREF2 8BBX A A0A8H3Y1T9 42 526 DBREF1 8BBX B 42 526 UNP A0A8H3Y1T9_ASPTU DBREF2 8BBX B A0A8H3Y1T9 42 526 SEQRES 1 A 485 ALA THR THR GLY GLU ALA TYR PHE GLU GLN LEU LEU ASP SEQRES 2 A 485 HIS HIS ASN PRO GLU LYS GLY THR PHE SER GLN ARG TYR SEQRES 3 A 485 TRP TRP SER THR GLU TYR TRP GLY GLY PRO GLY SER PRO SEQRES 4 A 485 VAL VAL LEU PHE THR PRO GLY GLU VAL SER ALA ASP GLY SEQRES 5 A 485 TYR GLU GLY TYR LEU THR ASN GLU THR LEU THR GLY VAL SEQRES 6 A 485 TYR ALA GLN GLU ILE GLN GLY ALA VAL ILE LEU ILE GLU SEQRES 7 A 485 HIS ARG TYR TRP GLY ASP SER SER PRO TYR GLU VAL LEU SEQRES 8 A 485 ASN ALA GLU THR LEU GLN TYR LEU THR LEU ASP GLN ALA SEQRES 9 A 485 ILE LEU ASP MET THR TYR PHE ALA GLU THR VAL LYS LEU SEQRES 10 A 485 GLN PHE ASP ASN SER THR ARG SER ASN ALA GLN ASN ALA SEQRES 11 A 485 PRO TRP VAL MET VAL GLY GLY SER TYR SER GLY ALA LEU SEQRES 12 A 485 THR ALA TRP THR GLU SER VAL ALA PRO GLY THR PHE TRP SEQRES 13 A 485 ALA TYR HIS ALA THR SER ALA PRO VAL GLU ALA ILE TYR SEQRES 14 A 485 ASP TYR TRP GLN TYR PHE TYR PRO ILE GLN GLN GLY MET SEQRES 15 A 485 ALA GLN ASN CYS SER LYS ASP VAL SER LEU VAL ALA GLU SEQRES 16 A 485 TYR VAL ASP LYS ILE GLY LYS ASN GLY THR ALA LYS GLU SEQRES 17 A 485 GLN GLN ALA LEU LYS GLU LEU PHE GLY LEU GLY ALA VAL SEQRES 18 A 485 GLU HIS PHE ASP ASP PHE ALA ALA VAL LEU PRO ASN GLY SEQRES 19 A 485 PRO TYR LEU TRP GLN ASP ASN ASP PHE ALA THR GLY TYR SEQRES 20 A 485 SER SER PHE PHE GLN PHE CYS ASP ALA VAL GLU GLY VAL SEQRES 21 A 485 GLU ALA GLY ALA ALA VAL THR PRO GLY PRO GLU GLY VAL SEQRES 22 A 485 GLY LEU GLU LYS ALA LEU ALA ASN TYR ALA ASN TRP PHE SEQRES 23 A 485 ASN SER THR ILE LEU PRO ASP TYR CYS ALA SER TYR GLY SEQRES 24 A 485 TYR TRP THR ASP GLU TRP SER VAL ALA CYS PHE ASP SER SEQRES 25 A 485 TYR ASN ALA SER SER PRO ILE TYR THR ASP THR SER VAL SEQRES 26 A 485 GLY ASN ALA VAL ASP ARG GLN TRP GLU TRP PHE LEU CYS SEQRES 27 A 485 ASN GLU PRO PHE PHE TYR TRP GLN ASP GLY ALA PRO GLU SEQRES 28 A 485 GLY THR SER THR ILE VAL PRO ARG LEU VAL SER ALA SER SEQRES 29 A 485 TYR TRP GLN ARG GLN CYS PRO LEU TYR PHE PRO GLU THR SEQRES 30 A 485 ASN GLY TYR THR TYR GLY SER ALA LYS GLY LYS ASN ALA SEQRES 31 A 485 ALA THR VAL ASN SER TRP THR GLY GLY TRP ASP MET THR SEQRES 32 A 485 ARG ASN THR THR ARG LEU ILE TRP THR ASN GLY GLN TYR SEQRES 33 A 485 ASP PRO TRP ARG ASP SER GLY VAL SER SER THR PHE ARG SEQRES 34 A 485 PRO GLY GLY PRO LEU ALA SER THR ALA ASN GLU PRO VAL SEQRES 35 A 485 GLN ILE ILE PRO GLY GLY PHE HIS CYS SER ASP LEU TYR SEQRES 36 A 485 MET ALA ASP TYR TYR ALA ASN GLU GLY VAL LYS LYS VAL SEQRES 37 A 485 VAL ASP ASN GLU VAL LYS GLN ILE LYS GLU TRP VAL GLU SEQRES 38 A 485 GLU TYR TYR ALA SEQRES 1 B 485 ALA THR THR GLY GLU ALA TYR PHE GLU GLN LEU LEU ASP SEQRES 2 B 485 HIS HIS ASN PRO GLU LYS GLY THR PHE SER GLN ARG TYR SEQRES 3 B 485 TRP TRP SER THR GLU TYR TRP GLY GLY PRO GLY SER PRO SEQRES 4 B 485 VAL VAL LEU PHE THR PRO GLY GLU VAL SER ALA ASP GLY SEQRES 5 B 485 TYR GLU GLY TYR LEU THR ASN GLU THR LEU THR GLY VAL SEQRES 6 B 485 TYR ALA GLN GLU ILE GLN GLY ALA VAL ILE LEU ILE GLU SEQRES 7 B 485 HIS ARG TYR TRP GLY ASP SER SER PRO TYR GLU VAL LEU SEQRES 8 B 485 ASN ALA GLU THR LEU GLN TYR LEU THR LEU ASP GLN ALA SEQRES 9 B 485 ILE LEU ASP MET THR TYR PHE ALA GLU THR VAL LYS LEU SEQRES 10 B 485 GLN PHE ASP ASN SER THR ARG SER ASN ALA GLN ASN ALA SEQRES 11 B 485 PRO TRP VAL MET VAL GLY GLY SER TYR SER GLY ALA LEU SEQRES 12 B 485 THR ALA TRP THR GLU SER VAL ALA PRO GLY THR PHE TRP SEQRES 13 B 485 ALA TYR HIS ALA THR SER ALA PRO VAL GLU ALA ILE TYR SEQRES 14 B 485 ASP TYR TRP GLN TYR PHE TYR PRO ILE GLN GLN GLY MET SEQRES 15 B 485 ALA GLN ASN CYS SER LYS ASP VAL SER LEU VAL ALA GLU SEQRES 16 B 485 TYR VAL ASP LYS ILE GLY LYS ASN GLY THR ALA LYS GLU SEQRES 17 B 485 GLN GLN ALA LEU LYS GLU LEU PHE GLY LEU GLY ALA VAL SEQRES 18 B 485 GLU HIS PHE ASP ASP PHE ALA ALA VAL LEU PRO ASN GLY SEQRES 19 B 485 PRO TYR LEU TRP GLN ASP ASN ASP PHE ALA THR GLY TYR SEQRES 20 B 485 SER SER PHE PHE GLN PHE CYS ASP ALA VAL GLU GLY VAL SEQRES 21 B 485 GLU ALA GLY ALA ALA VAL THR PRO GLY PRO GLU GLY VAL SEQRES 22 B 485 GLY LEU GLU LYS ALA LEU ALA ASN TYR ALA ASN TRP PHE SEQRES 23 B 485 ASN SER THR ILE LEU PRO ASP TYR CYS ALA SER TYR GLY SEQRES 24 B 485 TYR TRP THR ASP GLU TRP SER VAL ALA CYS PHE ASP SER SEQRES 25 B 485 TYR ASN ALA SER SER PRO ILE TYR THR ASP THR SER VAL SEQRES 26 B 485 GLY ASN ALA VAL ASP ARG GLN TRP GLU TRP PHE LEU CYS SEQRES 27 B 485 ASN GLU PRO PHE PHE TYR TRP GLN ASP GLY ALA PRO GLU SEQRES 28 B 485 GLY THR SER THR ILE VAL PRO ARG LEU VAL SER ALA SER SEQRES 29 B 485 TYR TRP GLN ARG GLN CYS PRO LEU TYR PHE PRO GLU THR SEQRES 30 B 485 ASN GLY TYR THR TYR GLY SER ALA LYS GLY LYS ASN ALA SEQRES 31 B 485 ALA THR VAL ASN SER TRP THR GLY GLY TRP ASP MET THR SEQRES 32 B 485 ARG ASN THR THR ARG LEU ILE TRP THR ASN GLY GLN TYR SEQRES 33 B 485 ASP PRO TRP ARG ASP SER GLY VAL SER SER THR PHE ARG SEQRES 34 B 485 PRO GLY GLY PRO LEU ALA SER THR ALA ASN GLU PRO VAL SEQRES 35 B 485 GLN ILE ILE PRO GLY GLY PHE HIS CYS SER ASP LEU TYR SEQRES 36 B 485 MET ALA ASP TYR TYR ALA ASN GLU GLY VAL LYS LYS VAL SEQRES 37 B 485 VAL ASP ASN GLU VAL LYS GLN ILE LYS GLU TRP VAL GLU SEQRES 38 B 485 GLU TYR TYR ALA HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET MAN D 6 11 HET MAN D 7 11 HET MAN D 8 11 HET MAN D 9 11 HET MAN D 10 11 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET MAN J 4 11 HET MAN J 5 11 HET MAN J 6 11 HET MAN J 7 11 HET MAN J 8 11 HET MAN J 9 11 HET NAG K 1 14 HET NAG K 2 14 HET PG4 B 601 13 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 18(C8 H15 N O6) FORMUL 4 BMA 2(C6 H12 O6) FORMUL 4 MAN 13(C6 H12 O6) FORMUL 12 PG4 C8 H18 O5 FORMUL 13 HOH *16(H2 O) HELIX 1 AA1 TYR A 94 THR A 99 5 6 HELIX 2 AA2 THR A 102 GLN A 112 1 11 HELIX 3 AA3 GLU A 135 LEU A 140 5 6 HELIX 4 AA4 THR A 141 VAL A 156 1 16 HELIX 5 AA5 SER A 163 ASN A 167 5 5 HELIX 6 AA6 SER A 179 ALA A 192 1 14 HELIX 7 AA7 TRP A 213 TYR A 215 5 3 HELIX 8 AA8 PHE A 216 MET A 223 1 8 HELIX 9 AA9 ALA A 224 GLY A 245 1 22 HELIX 10 AB1 THR A 246 PHE A 257 1 12 HELIX 11 AB2 HIS A 264 ALA A 270 1 7 HELIX 12 AB3 PRO A 273 LEU A 278 1 6 HELIX 13 AB4 TRP A 279 ASN A 282 5 4 HELIX 14 AB5 SER A 289 GLU A 299 1 11 HELIX 15 AB6 GLY A 315 ILE A 331 1 17 HELIX 16 AB7 TYR A 335 GLY A 340 5 6 HELIX 17 AB8 SER A 358 ASP A 363 1 6 HELIX 18 AB9 ASP A 371 GLU A 381 1 11 HELIX 19 AC1 SER A 403 ARG A 409 1 7 HELIX 20 AC2 GLN A 410 PHE A 415 1 6 HELIX 21 AC3 TYR A 423 LYS A 427 5 5 HELIX 22 AC4 ASN A 430 GLY A 439 1 10 HELIX 23 AC5 GLY A 440 ASN A 446 5 7 HELIX 24 AC6 TRP A 460 GLY A 464 5 5 HELIX 25 AC7 TYR A 496 ASN A 503 1 8 HELIX 26 AC8 ASN A 503 GLU A 523 1 21 HELIX 27 AC9 ASN B 57 LYS B 60 5 4 HELIX 28 AD1 TYR B 94 THR B 99 5 6 HELIX 29 AD2 THR B 102 GLN B 112 1 11 HELIX 30 AD3 GLU B 135 LEU B 140 5 6 HELIX 31 AD4 THR B 141 VAL B 156 1 16 HELIX 32 AD5 SER B 179 ALA B 192 1 14 HELIX 33 AD6 TRP B 213 TYR B 215 5 3 HELIX 34 AD7 PHE B 216 MET B 223 1 8 HELIX 35 AD8 ALA B 224 ASN B 244 1 21 HELIX 36 AD9 THR B 246 LEU B 256 1 11 HELIX 37 AE1 HIS B 264 ALA B 270 1 7 HELIX 38 AE2 PRO B 273 LEU B 278 1 6 HELIX 39 AE3 TRP B 279 ASN B 282 5 4 HELIX 40 AE4 SER B 289 GLU B 299 1 11 HELIX 41 AE5 GLY B 315 ILE B 331 1 17 HELIX 42 AE6 TYR B 335 GLY B 340 5 6 HELIX 43 AE7 SER B 358 ASP B 363 1 6 HELIX 44 AE8 ASP B 371 GLU B 381 1 11 HELIX 45 AE9 SER B 403 ARG B 409 1 7 HELIX 46 AF1 GLN B 410 PHE B 415 1 6 HELIX 47 AF2 TYR B 423 LYS B 427 5 5 HELIX 48 AF3 ASN B 430 GLY B 439 1 10 HELIX 49 AF4 GLY B 440 ASN B 446 5 7 HELIX 50 AF5 TRP B 460 GLY B 464 5 5 HELIX 51 AF6 TYR B 496 ASN B 503 1 8 HELIX 52 AF7 ASN B 503 GLU B 523 1 21 SHEET 1 AA1 8 THR A 44 LEU A 52 0 SHEET 2 AA1 8 THR A 62 SER A 70 -1 O TYR A 67 N ALA A 47 SHEET 3 AA1 8 ALA A 114 ILE A 118 -1 O VAL A 115 N SER A 70 SHEET 4 AA1 8 VAL A 81 PHE A 84 1 N VAL A 82 O ALA A 114 SHEET 5 AA1 8 TRP A 173 GLY A 178 1 O VAL A 174 N VAL A 81 SHEET 6 AA1 8 ALA A 198 THR A 202 1 O HIS A 200 N MET A 175 SHEET 7 AA1 8 LEU A 450 GLY A 455 1 O ILE A 451 N ALA A 201 SHEET 8 AA1 8 VAL A 483 ILE A 486 1 O ILE A 486 N ASN A 454 SHEET 1 AA2 2 ILE A 209 ASP A 211 0 SHEET 2 AA2 2 PHE A 384 TRP A 386 1 O TYR A 385 N ILE A 209 SHEET 1 AA3 8 THR B 44 LEU B 52 0 SHEET 2 AA3 8 THR B 62 SER B 70 -1 O GLN B 65 N PHE B 49 SHEET 3 AA3 8 ALA B 114 ILE B 118 -1 O LEU B 117 N TRP B 68 SHEET 4 AA3 8 VAL B 81 PHE B 84 1 N VAL B 82 O ALA B 114 SHEET 5 AA3 8 TRP B 173 GLY B 178 1 O VAL B 174 N VAL B 81 SHEET 6 AA3 8 ALA B 198 THR B 202 1 O HIS B 200 N MET B 175 SHEET 7 AA3 8 LEU B 450 GLY B 455 1 O ILE B 451 N TYR B 199 SHEET 8 AA3 8 VAL B 483 ILE B 486 1 O ILE B 486 N ASN B 454 SHEET 1 AA4 2 ILE B 209 ASP B 211 0 SHEET 2 AA4 2 PHE B 384 TRP B 386 1 O TYR B 385 N ILE B 209 SSBOND 1 CYS A 227 CYS A 295 1555 1555 2.09 SSBOND 2 CYS A 336 CYS A 350 1555 1555 2.08 SSBOND 3 CYS A 379 CYS A 411 1555 1555 2.06 SSBOND 4 CYS B 227 CYS B 295 1555 1555 2.02 SSBOND 5 CYS B 336 CYS B 350 1555 1555 2.07 SSBOND 6 CYS B 379 CYS B 411 1555 1555 2.07 LINK ND2 ASN A 100 C1 NAG C 1 1555 1555 1.46 LINK ND2 ASN A 226 C1 NAG D 1 1555 1555 1.46 LINK ND2 ASN A 355 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN A 446 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN B 100 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN B 226 C1 NAG J 1 1555 1555 1.44 LINK ND2 ASN B 328 C1 NAG K 1 1555 1555 1.45 LINK ND2 ASN B 355 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN B 446 C1 NAG I 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.43 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.43 LINK O6 BMA D 3 C1 MAN D 7 1555 1555 1.44 LINK O2 MAN D 4 C1 MAN D 5 1555 1555 1.45 LINK O2 MAN D 5 C1 MAN D 6 1555 1555 1.44 LINK O3 MAN D 7 C1 MAN D 8 1555 1555 1.45 LINK O6 MAN D 7 C1 MAN D 10 1555 1555 1.44 LINK O3 MAN D 8 C1 MAN D 9 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.48 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.43 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.44 LINK O3 BMA J 3 C1 MAN J 4 1555 1555 1.45 LINK O6 BMA J 3 C1 MAN J 7 1555 1555 1.45 LINK O2 MAN J 4 C1 MAN J 5 1555 1555 1.44 LINK O2 MAN J 5 C1 MAN J 6 1555 1555 1.44 LINK O3 MAN J 7 C1 MAN J 8 1555 1555 1.44 LINK O6 MAN J 7 C1 MAN J 9 1555 1555 1.45 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.45 CISPEP 1 GLU A 381 PRO A 382 0 -7.21 CISPEP 2 GLU B 381 PRO B 382 0 -8.49 CRYST1 102.170 156.206 193.400 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009788 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005171 0.00000