HEADER SUGAR BINDING PROTEIN 23-OCT-22 8BF3 TITLE CRYSTAL STRUCTURE OF FERULOYL ESTERASE WTSFAE1B IN COMPLEX WITH TITLE 2 XYLOBIOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERULIC ACID ESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.1.73; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FERULOYL ESTERASE, COMPLEX, (ALPHA/BETA/ALPHA)-SANDWICH, SUGAR KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.WILKENS REVDAT 2 31-JAN-24 8BF3 1 REMARK REVDAT 1 30-NOV-22 8BF3 0 JRNL AUTH C.WILKENS JRNL TITL CRYSTAL STRUCTURE OF FERULOYL ESTERASE WTSFAE1B IN COMPLEX JRNL TITL 2 WITH XYLOBIOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 272728 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.117 REMARK 3 R VALUE (WORKING SET) : 0.117 REMARK 3 FREE R VALUE : 0.138 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.050 REMARK 3 FREE R VALUE TEST SET COUNT : 5520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4700 - 3.7000 1.00 17709 183 0.1268 0.1357 REMARK 3 2 3.7000 - 2.9300 1.00 17751 185 0.1106 0.1324 REMARK 3 3 2.9300 - 2.5600 1.00 17754 192 0.1071 0.1199 REMARK 3 4 2.5600 - 2.3300 1.00 17737 190 0.0984 0.1389 REMARK 3 5 2.3300 - 2.1600 1.00 17729 182 0.0933 0.1101 REMARK 3 6 2.1600 - 2.0300 1.00 17778 182 0.0932 0.1075 REMARK 3 7 2.0300 - 1.9300 1.00 17738 187 0.0875 0.1283 REMARK 3 8 1.9300 - 1.8500 1.00 17754 190 0.0914 0.1193 REMARK 3 9 1.8500 - 1.7800 1.00 17742 184 0.0896 0.1161 REMARK 3 10 1.7800 - 1.7200 1.00 17753 190 0.0840 0.1108 REMARK 3 11 1.7200 - 1.6600 1.00 17745 193 0.0863 0.1033 REMARK 3 12 1.6600 - 1.6200 1.00 17800 187 0.0867 0.1111 REMARK 3 13 1.6200 - 1.5700 1.00 17744 189 0.0883 0.1110 REMARK 3 14 1.5700 - 1.5300 1.00 17741 187 0.0959 0.1324 REMARK 3 15 1.5300 - 1.5000 1.00 17717 188 0.1073 0.1324 REMARK 3 16 1.5000 - 1.4700 1.00 17734 189 0.1156 0.1330 REMARK 3 17 1.4700 - 1.4400 1.00 17751 192 0.1252 0.1468 REMARK 3 18 1.4400 - 1.4100 1.00 17803 189 0.1349 0.1484 REMARK 3 19 1.4100 - 1.3900 1.00 17700 185 0.1416 0.1560 REMARK 3 20 1.3900 - 1.3600 1.00 17731 189 0.1574 0.1668 REMARK 3 21 1.3600 - 1.3400 1.00 17734 186 0.1673 0.1779 REMARK 3 22 1.3400 - 1.3200 1.00 17819 189 0.1826 0.1945 REMARK 3 23 1.3200 - 1.3000 1.00 17737 189 0.2011 0.2397 REMARK 3 24 1.3000 - 1.2800 1.00 17654 183 0.2241 0.2269 REMARK 3 25 1.2800 - 1.2600 0.98 17316 185 0.2419 0.2747 REMARK 3 26 1.2600 - 1.2500 0.95 16989 180 0.2504 0.2791 REMARK 3 27 1.2500 - 1.2300 0.95 16869 175 0.2568 0.2781 REMARK 3 28 1.2300 - 1.2200 0.90 15883 167 0.2706 0.3373 REMARK 3 29 1.2200 - 1.2000 0.86 15237 162 0.2785 0.2442 REMARK 3 30 1.2000 - 1.1900 0.82 14519 151 0.2906 0.3329 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.115 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5939 REMARK 3 ANGLE : 0.884 8065 REMARK 3 CHIRALITY : 0.075 847 REMARK 3 PLANARITY : 0.008 1056 REMARK 3 DIHEDRAL : 11.953 2193 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292126237. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 272728 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.190 REMARK 200 RESOLUTION RANGE LOW (A) : 40.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8BBP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG6000; 0.1M HEPES PH 7; 0.2M REMARK 280 LICL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.79000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.47000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.67500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.47000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.79000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.67500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 PRO A 4 REMARK 465 ARG A 5 REMARK 465 PRO A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 PRO A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 ARG A 13 REMARK 465 PRO A 14 REMARK 465 GLY A 15 REMARK 465 PHE A 16 REMARK 465 ARG A 17 REMARK 465 ALA A 18 REMARK 465 PRO A 19 REMARK 465 ALA A 20 REMARK 465 VAL A 224 REMARK 465 THR A 225 REMARK 465 GLN A 226 REMARK 465 GLY A 227 REMARK 465 GLN A 228 REMARK 465 GLN A 229 REMARK 465 GLY A 230 REMARK 465 ILE A 231 REMARK 465 PRO A 232 REMARK 465 SER A 233 REMARK 465 GLY A 234 REMARK 465 SER A 235 REMARK 465 GLY A 236 REMARK 465 ALA A 301 REMARK 465 GLY A 302 REMARK 465 ARG A 303 REMARK 465 GLN A 304 REMARK 465 GLN A 305 REMARK 465 GLY A 306 REMARK 465 ALA A 307 REMARK 465 ASP A 308 REMARK 465 ALA A 309 REMARK 465 GLU A 310 REMARK 465 LYS A 311 REMARK 465 ILE A 312 REMARK 465 LEU A 387 REMARK 465 LEU A 388 REMARK 465 GLN B 1 REMARK 465 VAL B 2 REMARK 465 THR B 3 REMARK 465 PRO B 4 REMARK 465 ARG B 5 REMARK 465 PRO B 6 REMARK 465 GLU B 7 REMARK 465 ALA B 8 REMARK 465 ALA B 9 REMARK 465 PRO B 10 REMARK 465 GLY B 11 REMARK 465 ALA B 12 REMARK 465 ARG B 13 REMARK 465 PRO B 14 REMARK 465 GLY B 15 REMARK 465 PHE B 16 REMARK 465 ARG B 17 REMARK 465 ALA B 18 REMARK 465 PRO B 19 REMARK 465 ALA B 20 REMARK 465 VAL B 224 REMARK 465 THR B 225 REMARK 465 GLN B 226 REMARK 465 GLY B 227 REMARK 465 GLN B 228 REMARK 465 GLN B 229 REMARK 465 GLY B 230 REMARK 465 ILE B 231 REMARK 465 PRO B 232 REMARK 465 SER B 233 REMARK 465 GLY B 234 REMARK 465 SER B 235 REMARK 465 GLY B 236 REMARK 465 MET B 237 REMARK 465 ARG B 303 REMARK 465 GLN B 304 REMARK 465 GLN B 305 REMARK 465 GLY B 306 REMARK 465 LEU B 387 REMARK 465 LEU B 388 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 307 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 197 O HOH A 507 1.41 REMARK 500 HG1 THR A 261 O HOH A 509 1.55 REMARK 500 HH TYR A 163 O HOH A 503 1.57 REMARK 500 O HOH B 503 O HOH B 823 1.68 REMARK 500 O HOH A 813 O HOH A 863 1.76 REMARK 500 O HOH B 769 O HOH B 854 1.80 REMARK 500 O HOH B 854 O HOH B 907 1.82 REMARK 500 O2 XYP B 403 O HOH B 501 1.82 REMARK 500 O HOH A 511 O HOH A 759 1.83 REMARK 500 O HOH B 807 O HOH B 820 1.86 REMARK 500 O HOH B 807 O HOH B 937 1.86 REMARK 500 OG SER A 43 O HOH A 501 1.88 REMARK 500 OH TYR B 163 O HOH B 502 1.89 REMARK 500 O HOH B 501 O HOH B 556 1.89 REMARK 500 O HOH A 813 O HOH A 948 1.90 REMARK 500 O HOH A 863 O HOH A 948 1.91 REMARK 500 O HOH A 800 O HOH A 948 1.91 REMARK 500 O ASP A 41 O HOH A 502 1.93 REMARK 500 O HOH A 947 O HOH A 960 1.93 REMARK 500 OE1 GLN B 108 O HOH B 503 1.95 REMARK 500 O VAL B 222 O HOH B 504 1.98 REMARK 500 O HOH B 515 O HOH B 788 1.98 REMARK 500 O HOH A 570 O HOH A 849 1.99 REMARK 500 O HOH A 699 O HOH A 834 1.99 REMARK 500 OH TYR A 163 O HOH A 503 2.00 REMARK 500 O HOH A 545 O HOH A 887 2.00 REMARK 500 O HOH A 853 O HOH A 893 2.01 REMARK 500 O HOH B 877 O HOH B 906 2.01 REMARK 500 O HOH A 960 O HOH B 863 2.02 REMARK 500 O HOH A 882 O HOH A 977 2.03 REMARK 500 O HOH A 898 O HOH A 969 2.03 REMARK 500 O HOH A 842 O HOH A 864 2.03 REMARK 500 O HOH A 525 O HOH A 762 2.05 REMARK 500 O HOH A 771 O HOH A 947 2.05 REMARK 500 O HOH B 624 O HOH B 813 2.07 REMARK 500 O HOH A 824 O HOH A 879 2.07 REMARK 500 O HOH B 531 O HOH B 887 2.08 REMARK 500 O HOH A 737 O HOH A 998 2.08 REMARK 500 O HOH A 878 O HOH A 899 2.09 REMARK 500 OE1 GLN A 161 O HOH A 504 2.09 REMARK 500 O HOH B 734 O HOH B 935 2.09 REMARK 500 O HOH B 789 O HOH B 919 2.10 REMARK 500 NZ LYS B 197 O HOH B 505 2.11 REMARK 500 O HOH B 706 O HOH B 903 2.12 REMARK 500 N GLU A 313 O HOH A 505 2.13 REMARK 500 O HOH A 832 O HOH A 886 2.13 REMARK 500 O HOH A 518 O HOH A 847 2.13 REMARK 500 O HOH A 854 O HOH B 879 2.13 REMARK 500 O HOH B 932 O HOH B 953 2.14 REMARK 500 O HOH B 844 O HOH B 852 2.14 REMARK 500 REMARK 500 THIS ENTRY HAS 57 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH12 ARG B 162 OD2 ASP B 317 4545 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 122.98 -172.09 REMARK 500 GLU A 79 168.69 177.25 REMARK 500 ASP A 175 -179.53 -170.09 REMARK 500 SER A 272 -122.31 53.33 REMARK 500 SER B 39 120.86 -171.64 REMARK 500 GLU B 79 167.73 175.33 REMARK 500 ASP B 175 -179.68 -170.41 REMARK 500 SER B 272 -118.51 51.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1031 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1032 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A1033 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A1034 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A1035 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH A1036 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH A1037 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A1038 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A1039 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH B 997 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B 998 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 999 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B1000 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH B1001 DISTANCE = 6.12 ANGSTROMS REMARK 525 HOH B1002 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH B1003 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH B1004 DISTANCE = 6.50 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8BBP RELATED DB: PDB REMARK 900 APO STRUCTURE REMARK 900 RELATED ID: 6RZN RELATED DB: PDB REMARK 900 APO STRUCTURE DBREF1 8BF3 A 1 386 UNP A0A5S8WFA0_9BACT DBREF2 8BF3 A A0A5S8WFA0 1 386 DBREF1 8BF3 B 1 386 UNP A0A5S8WFA0_9BACT DBREF2 8BF3 B A0A5S8WFA0 1 386 SEQADV 8BF3 LEU A 387 UNP A0A5S8WFA EXPRESSION TAG SEQADV 8BF3 LEU A 388 UNP A0A5S8WFA EXPRESSION TAG SEQADV 8BF3 LEU B 387 UNP A0A5S8WFA EXPRESSION TAG SEQADV 8BF3 LEU B 388 UNP A0A5S8WFA EXPRESSION TAG SEQRES 1 A 388 GLN VAL THR PRO ARG PRO GLU ALA ALA PRO GLY ALA ARG SEQRES 2 A 388 PRO GLY PHE ARG ALA PRO ALA ARG ILE ILE SER PRO GLU SEQRES 3 A 388 ILE MET PRO ASP ASN LYS VAL THR PHE ARG VAL TYR SER SEQRES 4 A 388 LYS ASP ALA SER LYS VAL THR ILE THR GLY GLU TRP GLN SEQRES 5 A 388 THR GLY PRO GLY GLY VAL GLU GLU LEU VAL LYS ASN ASP SEQRES 6 A 388 THR GLY MET PHE SER ILE THR VAL GLY PRO LEU LYS PRO SEQRES 7 A 388 GLU LEU TYR ALA TYR ASN PHE THR VAL ASP GLY VAL LYS SEQRES 8 A 388 ALA LEU ASP ALA ASN ASN VAL GLN VAL ARG ARG ASP GLY SEQRES 9 A 388 THR ASN TYR GLN ASN PHE PHE ILE ILE PRO GLY PRO GLU SEQRES 10 A 388 SER ASP LEU TYR PHE HIS LYS ASN ASN VAL PRO HIS GLY SEQRES 11 A 388 THR VAL THR LYS VAL TRP TYR LYS SER SER VAL ILE GLY SEQRES 12 A 388 PHE ASP ARG ARG MET TYR VAL TYR THR PRO ALA GLY TYR SEQRES 13 A 388 GLU GLY ASP THR GLN ARG TYR PRO VAL PHE TYR LEU LEU SEQRES 14 A 388 HIS GLY ALA GLY GLY ASP GLU ASP ALA TRP THR ASN MET SEQRES 15 A 388 GLY ARG THR ALA GLN ILE MET ASP ASN LEU ILE ALA GLN SEQRES 16 A 388 GLY LYS ALA LYS PRO MET ILE VAL VAL MET THR ASN GLY SEQRES 17 A 388 ASN ALA ASN GLN ALA GLY ALA GLN ASN GLU VAL PRO PRO SEQRES 18 A 388 VAL PRO VAL THR GLN GLY GLN GLN GLY ILE PRO SER GLY SEQRES 19 A 388 SER GLY MET THR GLY LYS PHE GLU GLU HIS LEU VAL LYS SEQRES 20 A 388 ASP VAL VAL PRO PHE ILE GLU LYS ASN PHE ARG ALA LEU SEQRES 21 A 388 THR GLY LYS ASP ASN ARG ALA ILE ALA GLY LEU SER MET SEQRES 22 A 388 GLY GLY GLY HIS THR GLN THR ILE THR ASN ASP ASN PRO SEQRES 23 A 388 GLY MET PHE SER TYR ILE GLY VAL PHE SER MET GLY ILE SEQRES 24 A 388 MET ALA GLY ARG GLN GLN GLY ALA ASP ALA GLU LYS ILE SEQRES 25 A 388 GLU LYS GLU ARG ASP ALA LYS ILE GLU ALA LEU LYS LYS SEQRES 26 A 388 SER GLY TYR LYS LEU TYR TRP ILE ALA CYS GLY LYS ASP SEQRES 27 A 388 ASP PHE VAL TYR GLN SER ALA LEU THR LEU ARG ASN THR SEQRES 28 A 388 LEU ASP LYS HIS ASN PHE LYS TYR VAL TYR ARG GLU SER SEQRES 29 A 388 THR GLY GLY HIS THR TRP ALA ASN TRP ARG ILE TYR LEU SEQRES 30 A 388 SER GLU PHE ALA PRO MET LEU PHE LYS LEU LEU SEQRES 1 B 388 GLN VAL THR PRO ARG PRO GLU ALA ALA PRO GLY ALA ARG SEQRES 2 B 388 PRO GLY PHE ARG ALA PRO ALA ARG ILE ILE SER PRO GLU SEQRES 3 B 388 ILE MET PRO ASP ASN LYS VAL THR PHE ARG VAL TYR SER SEQRES 4 B 388 LYS ASP ALA SER LYS VAL THR ILE THR GLY GLU TRP GLN SEQRES 5 B 388 THR GLY PRO GLY GLY VAL GLU GLU LEU VAL LYS ASN ASP SEQRES 6 B 388 THR GLY MET PHE SER ILE THR VAL GLY PRO LEU LYS PRO SEQRES 7 B 388 GLU LEU TYR ALA TYR ASN PHE THR VAL ASP GLY VAL LYS SEQRES 8 B 388 ALA LEU ASP ALA ASN ASN VAL GLN VAL ARG ARG ASP GLY SEQRES 9 B 388 THR ASN TYR GLN ASN PHE PHE ILE ILE PRO GLY PRO GLU SEQRES 10 B 388 SER ASP LEU TYR PHE HIS LYS ASN ASN VAL PRO HIS GLY SEQRES 11 B 388 THR VAL THR LYS VAL TRP TYR LYS SER SER VAL ILE GLY SEQRES 12 B 388 PHE ASP ARG ARG MET TYR VAL TYR THR PRO ALA GLY TYR SEQRES 13 B 388 GLU GLY ASP THR GLN ARG TYR PRO VAL PHE TYR LEU LEU SEQRES 14 B 388 HIS GLY ALA GLY GLY ASP GLU ASP ALA TRP THR ASN MET SEQRES 15 B 388 GLY ARG THR ALA GLN ILE MET ASP ASN LEU ILE ALA GLN SEQRES 16 B 388 GLY LYS ALA LYS PRO MET ILE VAL VAL MET THR ASN GLY SEQRES 17 B 388 ASN ALA ASN GLN ALA GLY ALA GLN ASN GLU VAL PRO PRO SEQRES 18 B 388 VAL PRO VAL THR GLN GLY GLN GLN GLY ILE PRO SER GLY SEQRES 19 B 388 SER GLY MET THR GLY LYS PHE GLU GLU HIS LEU VAL LYS SEQRES 20 B 388 ASP VAL VAL PRO PHE ILE GLU LYS ASN PHE ARG ALA LEU SEQRES 21 B 388 THR GLY LYS ASP ASN ARG ALA ILE ALA GLY LEU SER MET SEQRES 22 B 388 GLY GLY GLY HIS THR GLN THR ILE THR ASN ASP ASN PRO SEQRES 23 B 388 GLY MET PHE SER TYR ILE GLY VAL PHE SER MET GLY ILE SEQRES 24 B 388 MET ALA GLY ARG GLN GLN GLY ALA ASP ALA GLU LYS ILE SEQRES 25 B 388 GLU LYS GLU ARG ASP ALA LYS ILE GLU ALA LEU LYS LYS SEQRES 26 B 388 SER GLY TYR LYS LEU TYR TRP ILE ALA CYS GLY LYS ASP SEQRES 27 B 388 ASP PHE VAL TYR GLN SER ALA LEU THR LEU ARG ASN THR SEQRES 28 B 388 LEU ASP LYS HIS ASN PHE LYS TYR VAL TYR ARG GLU SER SEQRES 29 B 388 THR GLY GLY HIS THR TRP ALA ASN TRP ARG ILE TYR LEU SEQRES 30 B 388 SER GLU PHE ALA PRO MET LEU PHE LYS LEU LEU HET XYP C 1 19 HET XYP C 2 18 HET EDO A 401 10 HET EDO A 402 10 HET EDO A 403 10 HET EDO A 404 10 HET EDO A 405 10 HET EDO A 406 10 HET EDO B 401 10 HET EDO B 402 10 HET XYP B 403 20 HET EDO B 404 10 HET EDO B 405 10 HET EDO B 406 10 HET EDO B 407 10 HET EDO B 408 10 HET EDO B 409 10 HETNAM XYP BETA-D-XYLOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN XYP BETA-D-XYLOSE; D-XYLOSE; XYLOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 XYP 3(C5 H10 O5) FORMUL 4 EDO 14(C2 H6 O2) FORMUL 19 HOH *1043(H2 O) HELIX 1 AA1 GLY A 54 VAL A 58 5 5 HELIX 2 AA2 GLY A 115 PHE A 122 5 8 HELIX 3 AA3 ASP A 177 MET A 182 1 6 HELIX 4 AA4 ARG A 184 GLN A 195 1 12 HELIX 5 AA5 GLY A 239 ASP A 248 1 10 HELIX 6 AA6 ASP A 248 PHE A 257 1 10 HELIX 7 AA7 GLY A 262 ASP A 264 5 3 HELIX 8 AA8 SER A 272 ASN A 285 1 14 HELIX 9 AA9 LYS A 314 LYS A 325 1 12 HELIX 10 AB1 VAL A 341 HIS A 355 1 15 HELIX 11 AB2 THR A 369 ALA A 381 1 13 HELIX 12 AB3 PRO A 382 LEU A 384 5 3 HELIX 13 AB4 GLY B 54 VAL B 58 5 5 HELIX 14 AB5 GLY B 115 PHE B 122 5 8 HELIX 15 AB6 ASP B 177 MET B 182 1 6 HELIX 16 AB7 ARG B 184 GLN B 195 1 12 HELIX 17 AB8 GLY B 239 ASP B 248 1 10 HELIX 18 AB9 ASP B 248 PHE B 257 1 10 HELIX 19 AC1 GLY B 262 ASP B 264 5 3 HELIX 20 AC2 SER B 272 ASN B 285 1 14 HELIX 21 AC3 ASP B 308 LYS B 325 1 18 HELIX 22 AC4 VAL B 341 HIS B 355 1 15 HELIX 23 AC5 THR B 369 ALA B 381 1 13 HELIX 24 AC6 PRO B 382 LEU B 384 5 3 SHEET 1 AA1 4 GLU A 26 ILE A 27 0 SHEET 2 AA1 4 VAL A 33 TYR A 38 -1 O THR A 34 N GLU A 26 SHEET 3 AA1 4 MET A 68 VAL A 73 -1 O PHE A 69 N VAL A 37 SHEET 4 AA1 4 VAL A 62 LYS A 63 -1 N VAL A 62 O SER A 70 SHEET 1 AA2 4 GLU A 59 GLU A 60 0 SHEET 2 AA2 4 VAL A 45 GLY A 49 -1 N ILE A 47 O GLU A 59 SHEET 3 AA2 4 GLU A 79 VAL A 87 -1 O ASN A 84 N THR A 48 SHEET 4 AA2 4 VAL A 90 ALA A 92 -1 O VAL A 90 N VAL A 87 SHEET 1 AA3 5 GLU A 59 GLU A 60 0 SHEET 2 AA3 5 VAL A 45 GLY A 49 -1 N ILE A 47 O GLU A 59 SHEET 3 AA3 5 GLU A 79 VAL A 87 -1 O ASN A 84 N THR A 48 SHEET 4 AA3 5 ASN A 106 ILE A 113 -1 O PHE A 111 N TYR A 81 SHEET 5 AA3 5 VAL A 100 ASP A 103 -1 N ARG A 101 O GLN A 108 SHEET 1 AA416 VAL A 360 SER A 364 0 SHEET 2 AA416 LEU A 330 GLY A 336 1 N ILE A 333 O ARG A 362 SHEET 3 AA416 TYR A 291 PHE A 295 1 N ILE A 292 O TRP A 332 SHEET 4 AA416 ARG A 266 LEU A 271 1 N GLY A 270 O PHE A 295 SHEET 5 AA416 VAL A 165 LEU A 169 1 N TYR A 167 O ALA A 267 SHEET 6 AA416 ILE A 202 MET A 205 1 O VAL A 204 N LEU A 168 SHEET 7 AA416 ARG A 146 THR A 152 -1 N TYR A 149 O MET A 205 SHEET 8 AA416 THR A 131 TYR A 137 -1 N THR A 133 O VAL A 150 SHEET 9 AA416 THR B 131 TYR B 137 -1 O LYS B 134 N VAL A 132 SHEET 10 AA416 ARG B 146 THR B 152 -1 O VAL B 150 N THR B 133 SHEET 11 AA416 ILE B 202 MET B 205 -1 O MET B 205 N TYR B 149 SHEET 12 AA416 VAL B 165 LEU B 169 1 N LEU B 168 O VAL B 204 SHEET 13 AA416 ARG B 266 LEU B 271 1 O ALA B 267 N TYR B 167 SHEET 14 AA416 TYR B 291 PHE B 295 1 O PHE B 295 N GLY B 270 SHEET 15 AA416 LEU B 330 GLY B 336 1 O TRP B 332 N ILE B 292 SHEET 16 AA416 VAL B 360 SER B 364 1 O ARG B 362 N ILE B 333 SHEET 1 AA5 4 GLU B 26 ILE B 27 0 SHEET 2 AA5 4 VAL B 33 TYR B 38 -1 O THR B 34 N GLU B 26 SHEET 3 AA5 4 MET B 68 VAL B 73 -1 O PHE B 69 N VAL B 37 SHEET 4 AA5 4 VAL B 62 LYS B 63 -1 N VAL B 62 O SER B 70 SHEET 1 AA6 4 GLU B 59 GLU B 60 0 SHEET 2 AA6 4 VAL B 45 GLY B 49 -1 N ILE B 47 O GLU B 59 SHEET 3 AA6 4 GLU B 79 VAL B 87 -1 O ASN B 84 N THR B 48 SHEET 4 AA6 4 VAL B 90 ALA B 92 -1 O VAL B 90 N VAL B 87 SHEET 1 AA7 5 GLU B 59 GLU B 60 0 SHEET 2 AA7 5 VAL B 45 GLY B 49 -1 N ILE B 47 O GLU B 59 SHEET 3 AA7 5 GLU B 79 VAL B 87 -1 O ASN B 84 N THR B 48 SHEET 4 AA7 5 ASN B 106 ILE B 113 -1 O PHE B 111 N TYR B 81 SHEET 5 AA7 5 VAL B 100 ASP B 103 -1 N ARG B 101 O GLN B 108 LINK O4 XYP C 1 C1 XYP C 2 1555 1555 1.37 CISPEP 1 SER A 24 PRO A 25 0 -7.82 CISPEP 2 GLY A 74 PRO A 75 0 7.08 CISPEP 3 SER B 24 PRO B 25 0 -7.88 CISPEP 4 GLY B 74 PRO B 75 0 6.73 CRYST1 65.580 99.350 132.940 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015249 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007522 0.00000