HEADER SIGNALING PROTEIN 24-OCT-22 8BF4 TITLE CRYSTAL STRUCTURE OF MOUSE PLEXIN-B1 (20-535) IN COMPLEX WITH VHH15 TITLE 2 AND VHH14 CAVEAT 8BF4 NAG F 604 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VHH14; COMPND 3 CHAIN: D, A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PLEXIN-B1; COMPND 7 CHAIN: F, C; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VHH15; COMPND 11 CHAIN: E, B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMELIDAE; SOURCE 3 ORGANISM_TAXID: 9835; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: EXPI293-T; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 GENE: PLXNB1, KIAA0407; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: EXPI293-T; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: CAMELIDAE; SOURCE 19 ORGANISM_TAXID: 9835; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 23 EXPRESSION_SYSTEM_CELL_LINE: EXPI293-T KEYWDS COMPLEX, INHIBITOR, VHH, NANOBODY, PLEXIN, SEMAPHORIN, ALLOSTERIC, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.COWAN,G.HALL,M.CARR REVDAT 3 20-SEP-23 8BF4 1 REMARK REVDAT 2 31-MAY-23 8BF4 1 JRNL REVDAT 1 03-MAY-23 8BF4 0 JRNL AUTH R.COWAN,M.TROKTER,A.OLEKSY,M.FEDOROVA,K.SAWMYNADEN, JRNL AUTH 2 T.WORZFELD,S.OFFERMANNS,D.MATTHEWS,M.D.CARR,G.HALL JRNL TITL NANOBODY INHIBITORS OF PLEXIN-B1 IDENTIFY ALLOSTERY IN JRNL TITL 2 PLEXIN-SEMAPHORIN INTERACTIONS AND SIGNALING. JRNL REF J.BIOL.CHEM. V. 299 04740 2023 JRNL REFN ESSN 1083-351X JRNL PMID 37088134 JRNL DOI 10.1016/J.JBC.2023.104740 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 95.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 72.1 REMARK 3 NUMBER OF REFLECTIONS : 76681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.630 REMARK 3 FREE R VALUE TEST SET COUNT : 2019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 95.2600 - 5.1800 1.00 7507 199 0.1817 0.1719 REMARK 3 2 5.1800 - 4.1100 1.00 7451 203 0.1510 0.1632 REMARK 3 3 4.1100 - 3.5900 1.00 7418 202 0.1818 0.1959 REMARK 3 4 3.5900 - 3.2600 1.00 7379 207 0.2036 0.2431 REMARK 3 5 3.2600 - 3.0300 1.00 7393 197 0.2383 0.2842 REMARK 3 6 3.0300 - 2.8500 1.00 7400 196 0.2624 0.2988 REMARK 3 7 2.8500 - 2.7100 0.98 7231 193 0.2763 0.2981 REMARK 3 8 2.7100 - 2.5900 0.88 6476 170 0.3054 0.3354 REMARK 3 9 2.5900 - 2.4900 0.74 5529 142 0.3107 0.3161 REMARK 3 10 2.4900 - 2.4000 0.59 4342 126 0.3134 0.3335 REMARK 3 11 2.4000 - 2.3300 0.45 3327 93 0.3142 0.3250 REMARK 3 12 2.3300 - 2.2600 0.25 1835 49 0.3231 0.3458 REMARK 3 13 2.2600 - 2.2000 0.13 980 29 0.3163 0.3554 REMARK 3 14 2.2000 - 2.1500 0.05 394 13 0.2981 0.2459 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.276 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.555 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 11276 REMARK 3 ANGLE : 0.801 15349 REMARK 3 CHIRALITY : 0.122 1722 REMARK 3 PLANARITY : 0.013 2017 REMARK 3 DIHEDRAL : 16.343 4048 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BF4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292125742. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873127 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.149 REMARK 200 RESOLUTION RANGE LOW (A) : 95.653 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 11.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 95.47 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.04500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8BB7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% (W/V) PEG 6000, 0.1 M SODIUM REMARK 280 CITRATE, PH 5.5, 3% DEXTRAN SULPHATE (MR 5000), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.61650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, F, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN D 1 REMARK 465 HIS D 119 REMARK 465 HIS D 120 REMARK 465 HIS D 121 REMARK 465 HIS D 122 REMARK 465 HIS D 123 REMARK 465 HIS D 124 REMARK 465 LEU F 20 REMARK 465 ARG F 21 REMARK 465 SER F 22 REMARK 465 PRO F 303 REMARK 465 THR F 304 REMARK 465 VAL F 305 REMARK 465 ASP F 306 REMARK 465 TRP F 307 REMARK 465 PRO F 308 REMARK 465 LEU F 309 REMARK 465 SER F 310 REMARK 465 ALA F 311 REMARK 465 SER F 312 REMARK 465 THR F 313 REMARK 465 GLY F 314 REMARK 465 ALA F 315 REMARK 465 SER F 316 REMARK 465 SER F 515 REMARK 465 ARG F 516 REMARK 465 ASP F 517 REMARK 465 GLN F 518 REMARK 465 GLY F 519 REMARK 465 PRO F 520 REMARK 465 GLU F 521 REMARK 465 ARG F 535 REMARK 465 LYS F 536 REMARK 465 HIS F 537 REMARK 465 HIS F 538 REMARK 465 HIS F 539 REMARK 465 HIS F 540 REMARK 465 HIS F 541 REMARK 465 HIS F 542 REMARK 465 GLN E 1 REMARK 465 ALA E 124 REMARK 465 HIS E 125 REMARK 465 HIS E 126 REMARK 465 HIS E 127 REMARK 465 HIS E 128 REMARK 465 HIS E 129 REMARK 465 HIS E 130 REMARK 465 GLY A 9 REMARK 465 GLY A 10 REMARK 465 LEU A 11 REMARK 465 VAL A 12 REMARK 465 GLN A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 15 REMARK 465 GLY A 16 REMARK 465 ARG A 85 REMARK 465 LEU A 86 REMARK 465 LYS A 87 REMARK 465 PRO A 88 REMARK 465 HIS A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 LEU C 20 REMARK 465 ARG C 21 REMARK 465 SER C 22 REMARK 465 PRO C 23 REMARK 465 LEU C 24 REMARK 465 VAL C 83 REMARK 465 ILE C 84 REMARK 465 PRO C 85 REMARK 465 GLY C 159 REMARK 465 LEU C 160 REMARK 465 VAL C 161 REMARK 465 GLY C 162 REMARK 465 GLY C 178 REMARK 465 THR C 304 REMARK 465 VAL C 305 REMARK 465 ASP C 306 REMARK 465 TRP C 307 REMARK 465 PRO C 308 REMARK 465 LEU C 309 REMARK 465 SER C 310 REMARK 465 ALA C 311 REMARK 465 SER C 312 REMARK 465 THR C 313 REMARK 465 GLY C 314 REMARK 465 ALA C 315 REMARK 465 SER C 515 REMARK 465 ARG C 516 REMARK 465 ASP C 517 REMARK 465 GLN C 518 REMARK 465 GLY C 519 REMARK 465 PRO C 520 REMARK 465 GLU C 521 REMARK 465 ARG C 535 REMARK 465 LYS C 536 REMARK 465 HIS C 537 REMARK 465 HIS C 538 REMARK 465 HIS C 539 REMARK 465 HIS C 540 REMARK 465 HIS C 541 REMARK 465 HIS C 542 REMARK 465 GLN B 1 REMARK 465 HIS B 125 REMARK 465 HIS B 126 REMARK 465 HIS B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD1 LEU F 534 O GLU C 530 1654 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU D 18 125.74 -170.50 REMARK 500 VAL D 48 -58.93 -131.73 REMARK 500 ALA D 98 39.22 -79.29 REMARK 500 LEU F 24 139.82 -177.11 REMARK 500 PRO F 25 -161.81 -107.82 REMARK 500 ALA F 26 117.65 -167.87 REMARK 500 ARG F 77 1.91 -68.80 REMARK 500 PRO F 93 108.46 -54.90 REMARK 500 GLN F 126 68.02 -150.30 REMARK 500 LEU F 132 119.80 -161.48 REMARK 500 VAL F 143 -69.49 -93.32 REMARK 500 THR F 173 -36.20 -131.35 REMARK 500 SER F 174 89.26 -8.76 REMARK 500 ARG F 175 20.88 -143.31 REMARK 500 SER F 241 -5.09 75.62 REMARK 500 GLU F 286 -70.82 -64.30 REMARK 500 TYR F 358 -153.56 62.49 REMARK 500 PRO F 385 94.88 30.22 REMARK 500 LEU F 398 142.50 -170.71 REMARK 500 ARG F 437 -74.08 54.00 REMARK 500 SER F 438 -53.08 77.00 REMARK 500 GLN F 448 119.60 -164.81 REMARK 500 THR F 470 -155.09 -101.51 REMARK 500 SER F 512 39.19 -77.98 REMARK 500 LEU F 531 -134.92 -147.04 REMARK 500 ALA E 106 61.86 -108.58 REMARK 500 TYR E 109 -72.17 -72.10 REMARK 500 GLN A 3 133.16 -173.67 REMARK 500 ALA A 98 46.86 -80.44 REMARK 500 ALA A 118 -23.97 -153.35 REMARK 500 ARG C 210 67.09 -101.73 REMARK 500 SER C 241 1.60 80.04 REMARK 500 ASP C 359 36.39 38.42 REMARK 500 SER C 379 -169.70 -161.35 REMARK 500 SER C 384 -99.32 -89.06 REMARK 500 PRO C 435 73.82 -55.20 REMARK 500 ARG C 437 -0.62 -48.36 REMARK 500 LYS C 444 118.88 -161.57 REMARK 500 ASP C 456 47.60 -84.71 REMARK 500 THR C 470 -157.00 -98.63 REMARK 500 SER C 512 27.94 -79.20 REMARK 500 ALA B 106 70.76 -100.99 REMARK 500 CYS B 108 72.66 55.09 REMARK 500 TYR B 109 -69.82 -121.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER F 384 PRO F 385 -146.82 REMARK 500 PRO C 435 GLY C 436 126.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG F 122 0.08 SIDE CHAIN REMARK 500 ARG F 133 0.13 SIDE CHAIN REMARK 500 ARG F 175 0.08 SIDE CHAIN REMARK 500 ARG E 105 0.08 SIDE CHAIN REMARK 500 ARG C 40 0.08 SIDE CHAIN REMARK 500 ARG C 245 0.08 SIDE CHAIN REMARK 500 ARG B 105 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER F 174 -11.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH F 868 DISTANCE = 5.96 ANGSTROMS DBREF 8BF4 D 1 124 PDB 8BF4 8BF4 1 124 DBREF 8BF4 F 20 535 UNP Q8CJH3 PLXB1_MOUSE 20 535 DBREF 8BF4 E 1 130 PDB 8BF4 8BF4 1 130 DBREF 8BF4 A 1 124 PDB 8BF4 8BF4 1 124 DBREF 8BF4 C 20 535 UNP Q8CJH3 PLXB1_MOUSE 20 535 DBREF 8BF4 B 1 130 PDB 8BF4 8BF4 1 130 SEQADV 8BF4 LYS F 536 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS F 537 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS F 538 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS F 539 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS F 540 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS F 541 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS F 542 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 LYS C 536 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS C 537 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS C 538 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS C 539 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS C 540 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS C 541 UNP Q8CJH3 EXPRESSION TAG SEQADV 8BF4 HIS C 542 UNP Q8CJH3 EXPRESSION TAG SEQRES 1 D 124 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 D 124 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 124 PHE THR LEU GLY TYR TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 4 D 124 ALA PRO GLY LYS GLU ARG GLU GLU VAL SER CYS ILE ASN SEQRES 5 D 124 ALA SER GLY GLY SER THR PHE TYR GLU ASP SER VAL LYS SEQRES 6 D 124 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 D 124 VAL PHE LEU GLN MET ASN ARG LEU LYS PRO GLU ASP THR SEQRES 8 D 124 ALA VAL TYR TYR CYS ALA ALA ALA CYS GLU VAL VAL ALA SEQRES 9 D 124 VAL GLY TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 D 124 ALA HIS HIS HIS HIS HIS HIS SEQRES 1 F 523 LEU ARG SER PRO LEU PRO ALA ALA PHE THR ALA ASN GLY SEQRES 2 F 523 THR HIS LEU GLN HIS LEU ALA ARG ASP PRO THR THR GLY SEQRES 3 F 523 THR LEU TYR VAL GLY ALA THR ASN PHE LEU PHE GLN LEU SEQRES 4 F 523 SER PRO GLY LEU GLN LEU GLU ALA VAL VAL SER THR GLY SEQRES 5 F 523 PRO VAL ASN ASP SER ARG ASP CYS LEU PRO PRO VAL ILE SEQRES 6 F 523 PRO ASP GLU CYS PRO GLN ALA GLN PRO THR ASN ASN PRO SEQRES 7 F 523 ASN GLN LEU LEU LEU VAL SER PRO GLU ALA LEU VAL VAL SEQRES 8 F 523 CYS GLY SER VAL HIS GLN GLY ILE CYS GLU LEU ARG SER SEQRES 9 F 523 LEU GLY GLN ILE ARG GLN LEU LEU LEU ARG PRO GLU ARG SEQRES 10 F 523 PRO GLY ASP THR GLN TYR VAL ALA ALA ASN ASP PRO ALA SEQRES 11 F 523 VAL SER THR VAL GLY LEU VAL ALA GLN GLY LEU VAL GLY SEQRES 12 F 523 GLU PRO LEU LEU PHE VAL GLY ARG GLY TYR THR SER ARG SEQRES 13 F 523 GLY VAL GLY GLY GLY ILE PRO PRO ILE THR THR ARG ALA SEQRES 14 F 523 LEU ARG PRO PRO ASP PRO GLN ALA ALA PHE SER TYR GLU SEQRES 15 F 523 GLU THR ALA LYS LEU ALA VAL GLY ARG LEU SER GLU TYR SEQRES 16 F 523 SER HIS HIS PHE VAL SER ALA PHE VAL ARG GLY ALA SER SEQRES 17 F 523 ALA TYR PHE LEU PHE LEU ARG ARG ASP LEU LYS ALA PRO SEQRES 18 F 523 SER ARG ALA PHE ARG ALA TYR VAL SER ARG VAL CYS LEU SEQRES 19 F 523 GLN ASP GLN HIS TYR TYR SER TYR VAL GLU LEU PRO LEU SEQRES 20 F 523 ALA CYS GLN GLY GLY ARG TYR GLY LEU ILE GLN ALA ALA SEQRES 21 F 523 ALA VAL ALA THR SER LYS GLU VAL ALA ARG GLY ASP VAL SEQRES 22 F 523 LEU PHE ALA ALA PHE SER SER VAL ALA PRO PRO THR VAL SEQRES 23 F 523 ASP TRP PRO LEU SER ALA SER THR GLY ALA SER GLY THR SEQRES 24 F 523 SER VAL LEU CYS ALA PHE PRO LEU ASP GLU VAL ASP GLN SEQRES 25 F 523 LEU ALA ASN TYR THR ARG ASP ALA CYS TYR THR ARG GLU SEQRES 26 F 523 GLY ARG ALA GLU ASN GLY THR LYS VAL ALA ASP ILE ALA SEQRES 27 F 523 TYR ASP VAL LEU SER ASP CYS ALA GLN LEU PRO VAL ASP SEQRES 28 F 523 THR PRO ASP ALA PHE PRO CYS GLY SER ASP HIS THR PRO SEQRES 29 F 523 SER PRO MET VAL SER CYS VAL PRO LEU GLU ALA THR PRO SEQRES 30 F 523 ILE LEU GLU LEU PRO GLY VAL GLN LEU THR ALA VAL ALA SEQRES 31 F 523 VAL THR MET GLU ASP GLY HIS THR ILE ALA PHE LEU GLY SEQRES 32 F 523 ASP SER GLN GLY GLN LEU HIS ARG VAL TYR LEU GLY PRO SEQRES 33 F 523 GLY ARG SER ALA ALA PRO TYR SER LYS GLN SER ILE GLN SEQRES 34 F 523 PRO GLY SER PRO VAL ASN ARG ASP LEU THR PHE ASP GLY SEQRES 35 F 523 THR PHE GLU HIS LEU TYR VAL ALA THR GLN THR THR LEU SEQRES 36 F 523 VAL LYS VAL PRO VAL ALA PRO CYS ALA GLN HIS LEU ASP SEQRES 37 F 523 CYS ASP SER CYS LEU ALA HIS ARG ASP PRO TYR CYS GLY SEQRES 38 F 523 TRP CYS VAL LEU LEU GLY ARG CYS SER ARG ARG SER GLU SEQRES 39 F 523 CYS SER ARG ASP GLN GLY PRO GLU GLN TRP LEU TRP SER SEQRES 40 F 523 PHE GLN PRO GLU LEU GLY CYS LEU ARG LYS HIS HIS HIS SEQRES 41 F 523 HIS HIS HIS SEQRES 1 E 130 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 E 130 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 E 130 PHE ARG LEU ASP TYR TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 4 E 130 ALA PRO GLY LYS GLU ARG GLU GLY VAL LEU CYS ILE SER SEQRES 5 E 130 SER SER GLY GLY SER ILE ASN TYR ALA ASP SER VAL LYS SEQRES 6 E 130 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 E 130 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 E 130 ALA VAL TYR TYR CYS GLY ALA SER SER TYR ASN THR GLN SEQRES 9 E 130 ARG ALA GLU CYS TYR GLY MET ASP TYR TRP GLY LYS GLY SEQRES 10 E 130 THR GLN VAL THR VAL SER ALA HIS HIS HIS HIS HIS HIS SEQRES 1 A 124 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 124 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 124 PHE THR LEU GLY TYR TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 4 A 124 ALA PRO GLY LYS GLU ARG GLU GLU VAL SER CYS ILE ASN SEQRES 5 A 124 ALA SER GLY GLY SER THR PHE TYR GLU ASP SER VAL LYS SEQRES 6 A 124 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 A 124 VAL PHE LEU GLN MET ASN ARG LEU LYS PRO GLU ASP THR SEQRES 8 A 124 ALA VAL TYR TYR CYS ALA ALA ALA CYS GLU VAL VAL ALA SEQRES 9 A 124 VAL GLY TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 10 A 124 ALA HIS HIS HIS HIS HIS HIS SEQRES 1 C 523 LEU ARG SER PRO LEU PRO ALA ALA PHE THR ALA ASN GLY SEQRES 2 C 523 THR HIS LEU GLN HIS LEU ALA ARG ASP PRO THR THR GLY SEQRES 3 C 523 THR LEU TYR VAL GLY ALA THR ASN PHE LEU PHE GLN LEU SEQRES 4 C 523 SER PRO GLY LEU GLN LEU GLU ALA VAL VAL SER THR GLY SEQRES 5 C 523 PRO VAL ASN ASP SER ARG ASP CYS LEU PRO PRO VAL ILE SEQRES 6 C 523 PRO ASP GLU CYS PRO GLN ALA GLN PRO THR ASN ASN PRO SEQRES 7 C 523 ASN GLN LEU LEU LEU VAL SER PRO GLU ALA LEU VAL VAL SEQRES 8 C 523 CYS GLY SER VAL HIS GLN GLY ILE CYS GLU LEU ARG SER SEQRES 9 C 523 LEU GLY GLN ILE ARG GLN LEU LEU LEU ARG PRO GLU ARG SEQRES 10 C 523 PRO GLY ASP THR GLN TYR VAL ALA ALA ASN ASP PRO ALA SEQRES 11 C 523 VAL SER THR VAL GLY LEU VAL ALA GLN GLY LEU VAL GLY SEQRES 12 C 523 GLU PRO LEU LEU PHE VAL GLY ARG GLY TYR THR SER ARG SEQRES 13 C 523 GLY VAL GLY GLY GLY ILE PRO PRO ILE THR THR ARG ALA SEQRES 14 C 523 LEU ARG PRO PRO ASP PRO GLN ALA ALA PHE SER TYR GLU SEQRES 15 C 523 GLU THR ALA LYS LEU ALA VAL GLY ARG LEU SER GLU TYR SEQRES 16 C 523 SER HIS HIS PHE VAL SER ALA PHE VAL ARG GLY ALA SER SEQRES 17 C 523 ALA TYR PHE LEU PHE LEU ARG ARG ASP LEU LYS ALA PRO SEQRES 18 C 523 SER ARG ALA PHE ARG ALA TYR VAL SER ARG VAL CYS LEU SEQRES 19 C 523 GLN ASP GLN HIS TYR TYR SER TYR VAL GLU LEU PRO LEU SEQRES 20 C 523 ALA CYS GLN GLY GLY ARG TYR GLY LEU ILE GLN ALA ALA SEQRES 21 C 523 ALA VAL ALA THR SER LYS GLU VAL ALA ARG GLY ASP VAL SEQRES 22 C 523 LEU PHE ALA ALA PHE SER SER VAL ALA PRO PRO THR VAL SEQRES 23 C 523 ASP TRP PRO LEU SER ALA SER THR GLY ALA SER GLY THR SEQRES 24 C 523 SER VAL LEU CYS ALA PHE PRO LEU ASP GLU VAL ASP GLN SEQRES 25 C 523 LEU ALA ASN TYR THR ARG ASP ALA CYS TYR THR ARG GLU SEQRES 26 C 523 GLY ARG ALA GLU ASN GLY THR LYS VAL ALA ASP ILE ALA SEQRES 27 C 523 TYR ASP VAL LEU SER ASP CYS ALA GLN LEU PRO VAL ASP SEQRES 28 C 523 THR PRO ASP ALA PHE PRO CYS GLY SER ASP HIS THR PRO SEQRES 29 C 523 SER PRO MET VAL SER CYS VAL PRO LEU GLU ALA THR PRO SEQRES 30 C 523 ILE LEU GLU LEU PRO GLY VAL GLN LEU THR ALA VAL ALA SEQRES 31 C 523 VAL THR MET GLU ASP GLY HIS THR ILE ALA PHE LEU GLY SEQRES 32 C 523 ASP SER GLN GLY GLN LEU HIS ARG VAL TYR LEU GLY PRO SEQRES 33 C 523 GLY ARG SER ALA ALA PRO TYR SER LYS GLN SER ILE GLN SEQRES 34 C 523 PRO GLY SER PRO VAL ASN ARG ASP LEU THR PHE ASP GLY SEQRES 35 C 523 THR PHE GLU HIS LEU TYR VAL ALA THR GLN THR THR LEU SEQRES 36 C 523 VAL LYS VAL PRO VAL ALA PRO CYS ALA GLN HIS LEU ASP SEQRES 37 C 523 CYS ASP SER CYS LEU ALA HIS ARG ASP PRO TYR CYS GLY SEQRES 38 C 523 TRP CYS VAL LEU LEU GLY ARG CYS SER ARG ARG SER GLU SEQRES 39 C 523 CYS SER ARG ASP GLN GLY PRO GLU GLN TRP LEU TRP SER SEQRES 40 C 523 PHE GLN PRO GLU LEU GLY CYS LEU ARG LYS HIS HIS HIS SEQRES 41 C 523 HIS HIS HIS SEQRES 1 B 130 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 130 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 130 PHE ARG LEU ASP TYR TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 4 B 130 ALA PRO GLY LYS GLU ARG GLU GLY VAL LEU CYS ILE SER SEQRES 5 B 130 SER SER GLY GLY SER ILE ASN TYR ALA ASP SER VAL LYS SEQRES 6 B 130 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 B 130 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 B 130 ALA VAL TYR TYR CYS GLY ALA SER SER TYR ASN THR GLN SEQRES 9 B 130 ARG ALA GLU CYS TYR GLY MET ASP TYR TRP GLY LYS GLY SEQRES 10 B 130 THR GLN VAL THR VAL SER ALA HIS HIS HIS HIS HIS HIS HET NAG F 601 14 HET NAG F 602 14 HET NAG F 603 14 HET NAG F 604 14 HET CL F 605 1 HET NAG C 601 14 HET NAG C 602 14 HET NAG C 603 14 HET EDO C 604 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 7 NAG 7(C8 H15 N O6) FORMUL 11 CL CL 1- FORMUL 15 EDO C2 H6 O2 FORMUL 16 HOH *392(H2 O) HELIX 1 AA1 LYS D 87 THR D 91 5 5 HELIX 2 AA2 GLU D 101 VAL D 105 5 5 HELIX 3 AA3 VAL F 114 GLY F 117 5 4 HELIX 4 AA4 ASP F 193 ALA F 197 5 5 HELIX 5 AA5 ARG F 210 SER F 215 1 6 HELIX 6 AA6 ALA F 239 ARG F 242 5 4 HELIX 7 AA7 LEU F 326 ARG F 343 1 18 HELIX 8 AA8 ASP F 370 PHE F 375 1 6 HELIX 9 AA9 ASP F 487 HIS F 494 1 8 HELIX 10 AB1 ARG F 510 CYS F 514 5 5 HELIX 11 AB2 ASP E 62 LYS E 65 5 4 HELIX 12 AB3 LYS E 87 THR E 91 5 5 HELIX 13 AB4 GLU A 101 VAL A 105 5 5 HELIX 14 AB5 VAL C 114 GLY C 117 5 4 HELIX 15 AB6 GLY C 138 TYR C 142 5 5 HELIX 16 AB7 ASP C 193 ALA C 197 5 5 HELIX 17 AB8 ARG C 210 SER C 215 1 6 HELIX 18 AB9 ALA C 239 ARG C 242 5 4 HELIX 19 AC1 LEU C 326 ARG C 343 1 18 HELIX 20 AC2 ASP C 370 PHE C 375 1 6 HELIX 21 AC3 ASP C 487 HIS C 494 1 8 HELIX 22 AC4 ARG C 510 CYS C 514 5 5 HELIX 23 AC5 ASP B 62 LYS B 65 5 4 HELIX 24 AC6 LYS B 87 THR B 91 5 5 SHEET 1 AA1 4 LEU D 4 SER D 7 0 SHEET 2 AA1 4 LEU D 18 ALA D 24 -1 O SER D 21 N SER D 7 SHEET 3 AA1 4 THR D 78 MET D 83 -1 O MET D 83 N LEU D 18 SHEET 4 AA1 4 PHE D 68 ASP D 73 -1 N THR D 69 O GLN D 82 SHEET 1 AA2 6 GLY D 10 GLN D 13 0 SHEET 2 AA2 6 THR D 112 SER D 117 1 O THR D 115 N GLY D 10 SHEET 3 AA2 6 ALA D 92 ALA D 97 -1 N TYR D 94 O THR D 112 SHEET 4 AA2 6 ILE D 34 GLN D 39 -1 N PHE D 37 O TYR D 95 SHEET 5 AA2 6 GLU D 46 ILE D 51 -1 O GLU D 46 N ARG D 38 SHEET 6 AA2 6 THR D 58 TYR D 60 -1 O PHE D 59 N CYS D 50 SHEET 1 AA3 4 ALA F 27 THR F 29 0 SHEET 2 AA3 4 THR F 473 PRO F 478 -1 O LEU F 474 N PHE F 28 SHEET 3 AA3 4 HIS F 465 ALA F 469 -1 N VAL F 468 O VAL F 475 SHEET 4 AA3 4 THR F 458 PHE F 459 -1 N THR F 458 O TYR F 467 SHEET 1 AA4 4 LEU F 35 ARG F 40 0 SHEET 2 AA4 4 LEU F 47 ALA F 51 -1 O TYR F 48 N ALA F 39 SHEET 3 AA4 4 PHE F 54 LEU F 58 -1 O LEU F 58 N LEU F 47 SHEET 4 AA4 4 LEU F 64 SER F 69 -1 O GLU F 65 N GLN F 57 SHEET 1 AA5 2 VAL F 73 ASP F 75 0 SHEET 2 AA5 2 GLN F 92 THR F 94 -1 O THR F 94 N VAL F 73 SHEET 1 AA6 4 ASN F 98 SER F 104 0 SHEET 2 AA6 4 ALA F 107 GLY F 112 -1 O VAL F 109 N LEU F 102 SHEET 3 AA6 4 CYS F 119 SER F 123 -1 O ARG F 122 N LEU F 108 SHEET 4 AA6 4 GLN F 126 LEU F 132 -1 O LEU F 131 N LEU F 121 SHEET 1 AA7 3 THR F 152 GLN F 158 0 SHEET 2 AA7 3 PRO F 164 ARG F 170 -1 O GLY F 169 N VAL F 153 SHEET 3 AA7 3 ILE F 184 ALA F 188 -1 O ARG F 187 N LEU F 166 SHEET 1 AA8 6 HIS F 217 ARG F 224 0 SHEET 2 AA8 6 SER F 227 ASP F 236 -1 O LEU F 231 N VAL F 219 SHEET 3 AA8 6 ALA F 243 CYS F 252 -1 O ALA F 243 N ASP F 236 SHEET 4 AA8 6 VAL F 262 CYS F 268 -1 O LEU F 266 N ALA F 246 SHEET 5 AA8 6 MET F 386 SER F 388 1 O SER F 388 N GLU F 263 SHEET 6 AA8 6 ALA F 354 ILE F 356 -1 N ASP F 355 O VAL F 387 SHEET 1 AA9 5 HIS F 217 ARG F 224 0 SHEET 2 AA9 5 SER F 227 ASP F 236 -1 O LEU F 231 N VAL F 219 SHEET 3 AA9 5 ALA F 243 CYS F 252 -1 O ALA F 243 N ASP F 236 SHEET 4 AA9 5 VAL F 262 CYS F 268 -1 O LEU F 266 N ALA F 246 SHEET 5 AA9 5 LEU F 392 ALA F 394 1 O LEU F 392 N PRO F 265 SHEET 1 AB1 4 ILE F 276 VAL F 281 0 SHEET 2 AB1 4 VAL F 292 PHE F 297 -1 O PHE F 294 N ALA F 280 SHEET 3 AB1 4 SER F 319 PRO F 325 -1 O CYS F 322 N ALA F 295 SHEET 4 AB1 4 PRO F 396 LEU F 400 -1 O LEU F 400 N SER F 319 SHEET 1 AB2 4 LEU F 405 GLU F 413 0 SHEET 2 AB2 4 HIS F 416 ASP F 423 -1 O PHE F 420 N ALA F 409 SHEET 3 AB2 4 GLN F 427 GLY F 434 -1 O HIS F 429 N LEU F 421 SHEET 4 AB2 4 ALA F 440 SER F 446 -1 O GLN F 445 N LEU F 428 SHEET 1 AB3 3 CYS F 508 SER F 509 0 SHEET 2 AB3 3 GLY F 500 CYS F 502 -1 N GLY F 500 O SER F 509 SHEET 3 AB3 3 TRP F 523 TRP F 525 -1 O LEU F 524 N TRP F 501 SHEET 1 AB4 4 GLN E 3 SER E 7 0 SHEET 2 AB4 4 LEU E 18 SER E 25 -1 O SER E 25 N GLN E 3 SHEET 3 AB4 4 THR E 78 MET E 83 -1 O MET E 83 N LEU E 18 SHEET 4 AB4 4 PHE E 68 ASP E 73 -1 N SER E 71 O TYR E 80 SHEET 1 AB5 6 GLY E 10 VAL E 12 0 SHEET 2 AB5 6 THR E 118 VAL E 122 1 O THR E 121 N GLY E 10 SHEET 3 AB5 6 ALA E 92 SER E 99 -1 N TYR E 94 O THR E 118 SHEET 4 AB5 6 ALA E 33 GLN E 39 -1 N PHE E 37 O TYR E 95 SHEET 5 AB5 6 GLU E 46 ILE E 51 -1 O VAL E 48 N TRP E 36 SHEET 6 AB5 6 ILE E 58 TYR E 60 -1 O ASN E 59 N CYS E 50 SHEET 1 AB6 4 GLY E 10 VAL E 12 0 SHEET 2 AB6 4 THR E 118 VAL E 122 1 O THR E 121 N GLY E 10 SHEET 3 AB6 4 ALA E 92 SER E 99 -1 N TYR E 94 O THR E 118 SHEET 4 AB6 4 TYR E 113 TRP E 114 -1 O TYR E 113 N ALA E 98 SHEET 1 AB7 4 LEU A 4 SER A 7 0 SHEET 2 AB7 4 LEU A 18 ALA A 24 -1 O SER A 21 N SER A 7 SHEET 3 AB7 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AB7 4 PHE A 68 ASP A 73 -1 N ASP A 73 O THR A 78 SHEET 1 AB8 5 THR A 58 TYR A 60 0 SHEET 2 AB8 5 GLU A 46 ILE A 51 -1 N CYS A 50 O PHE A 59 SHEET 3 AB8 5 ILE A 34 GLN A 39 -1 N TRP A 36 O VAL A 48 SHEET 4 AB8 5 VAL A 93 ALA A 97 -1 O TYR A 95 N PHE A 37 SHEET 5 AB8 5 THR A 112 GLN A 113 -1 O THR A 112 N TYR A 94 SHEET 1 AB9 4 PHE C 28 THR C 29 0 SHEET 2 AB9 4 THR C 473 PRO C 478 -1 O LEU C 474 N PHE C 28 SHEET 3 AB9 4 HIS C 465 ALA C 469 -1 N VAL C 468 O VAL C 475 SHEET 4 AB9 4 THR C 458 PHE C 459 -1 N THR C 458 O TYR C 467 SHEET 1 AC1 4 LEU C 35 ARG C 40 0 SHEET 2 AC1 4 LEU C 47 ALA C 51 -1 O GLY C 50 N GLN C 36 SHEET 3 AC1 4 PHE C 54 LEU C 58 -1 O LEU C 58 N LEU C 47 SHEET 4 AC1 4 LEU C 64 SER C 69 -1 O GLU C 65 N GLN C 57 SHEET 1 AC2 2 VAL C 73 ASP C 75 0 SHEET 2 AC2 2 GLN C 92 THR C 94 -1 O THR C 94 N VAL C 73 SHEET 1 AC3 4 ASN C 98 VAL C 103 0 SHEET 2 AC3 4 LEU C 108 GLY C 112 -1 O VAL C 109 N LEU C 102 SHEET 3 AC3 4 CYS C 119 SER C 123 -1 O GLU C 120 N VAL C 110 SHEET 4 AC3 4 GLN C 126 LEU C 132 -1 O LEU C 131 N LEU C 121 SHEET 1 AC4 4 THR C 152 ALA C 157 0 SHEET 2 AC4 4 LEU C 165 ARG C 170 -1 O PHE C 167 N LEU C 155 SHEET 3 AC4 4 ILE C 184 ALA C 188 -1 O ARG C 187 N LEU C 166 SHEET 4 AC4 4 TYR C 200 LYS C 205 -1 O ALA C 204 N THR C 186 SHEET 1 AC5 6 HIS C 217 ARG C 224 0 SHEET 2 AC5 6 SER C 227 ASP C 236 -1 O TYR C 229 N PHE C 222 SHEET 3 AC5 6 ALA C 243 CYS C 252 -1 O ALA C 243 N ASP C 236 SHEET 4 AC5 6 VAL C 262 CYS C 268 -1 O LEU C 266 N ALA C 246 SHEET 5 AC5 6 MET C 386 SER C 388 1 O SER C 388 N GLU C 263 SHEET 6 AC5 6 ALA C 354 ILE C 356 -1 N ASP C 355 O VAL C 387 SHEET 1 AC6 5 HIS C 217 ARG C 224 0 SHEET 2 AC6 5 SER C 227 ASP C 236 -1 O TYR C 229 N PHE C 222 SHEET 3 AC6 5 ALA C 243 CYS C 252 -1 O ALA C 243 N ASP C 236 SHEET 4 AC6 5 VAL C 262 CYS C 268 -1 O LEU C 266 N ALA C 246 SHEET 5 AC6 5 LEU C 392 ALA C 394 1 O LEU C 392 N PRO C 265 SHEET 1 AC7 4 ILE C 276 VAL C 281 0 SHEET 2 AC7 4 VAL C 292 PHE C 297 -1 O ALA C 296 N GLN C 277 SHEET 3 AC7 4 SER C 319 PRO C 325 -1 O CYS C 322 N ALA C 295 SHEET 4 AC7 4 PRO C 396 LEU C 400 -1 O LEU C 400 N SER C 319 SHEET 1 AC8 4 LEU C 405 GLU C 413 0 SHEET 2 AC8 4 HIS C 416 ASP C 423 -1 O PHE C 420 N ALA C 409 SHEET 3 AC8 4 GLN C 427 TYR C 432 -1 O HIS C 429 N LEU C 421 SHEET 4 AC8 4 ALA C 440 SER C 446 -1 O GLN C 445 N LEU C 428 SHEET 1 AC9 3 ARG C 507 SER C 509 0 SHEET 2 AC9 3 GLY C 500 CYS C 502 -1 N GLY C 500 O SER C 509 SHEET 3 AC9 3 TRP C 523 TRP C 525 -1 O LEU C 524 N TRP C 501 SHEET 1 AD1 4 GLN B 3 SER B 7 0 SHEET 2 AD1 4 LEU B 18 SER B 25 -1 O ALA B 23 N GLN B 5 SHEET 3 AD1 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 AD1 4 PHE B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 AD2 6 GLY B 10 VAL B 12 0 SHEET 2 AD2 6 THR B 118 VAL B 122 1 O THR B 121 N GLY B 10 SHEET 3 AD2 6 ALA B 92 SER B 99 -1 N TYR B 94 O THR B 118 SHEET 4 AD2 6 ALA B 33 GLN B 39 -1 N PHE B 37 O TYR B 95 SHEET 5 AD2 6 GLU B 46 ILE B 51 -1 O LEU B 49 N TRP B 36 SHEET 6 AD2 6 ILE B 58 TYR B 60 -1 O ASN B 59 N CYS B 50 SHEET 1 AD3 4 GLY B 10 VAL B 12 0 SHEET 2 AD3 4 THR B 118 VAL B 122 1 O THR B 121 N GLY B 10 SHEET 3 AD3 4 ALA B 92 SER B 99 -1 N TYR B 94 O THR B 118 SHEET 4 AD3 4 TYR B 113 TRP B 114 -1 O TYR B 113 N ALA B 98 SSBOND 1 CYS D 22 CYS D 96 1555 1555 2.04 SSBOND 2 CYS D 50 CYS D 100 1555 1555 2.04 SSBOND 3 CYS F 79 CYS F 88 1555 1555 2.02 SSBOND 4 CYS F 111 CYS F 119 1555 1555 2.03 SSBOND 5 CYS F 252 CYS F 377 1555 1555 2.04 SSBOND 6 CYS F 268 CYS F 322 1555 1555 2.04 SSBOND 7 CYS F 340 CYS F 364 1555 1555 2.04 SSBOND 8 CYS F 482 CYS F 499 1555 1555 2.04 SSBOND 9 CYS F 491 CYS F 508 1555 1555 2.04 SSBOND 10 CYS F 502 CYS F 514 1555 1555 2.03 SSBOND 11 CYS E 22 CYS E 96 1555 1555 2.01 SSBOND 12 CYS E 50 CYS E 108 1555 1555 2.04 SSBOND 13 CYS A 22 CYS A 96 1555 1555 2.04 SSBOND 14 CYS A 50 CYS A 100 1555 1555 2.03 SSBOND 15 CYS C 79 CYS C 88 1555 1555 2.04 SSBOND 16 CYS C 111 CYS C 119 1555 1555 2.03 SSBOND 17 CYS C 252 CYS C 377 1555 1555 2.04 SSBOND 18 CYS C 268 CYS C 322 1555 1555 2.03 SSBOND 19 CYS C 340 CYS C 364 1555 1555 2.04 SSBOND 20 CYS C 482 CYS C 499 1555 1555 2.04 SSBOND 21 CYS C 491 CYS C 508 1555 1555 2.04 SSBOND 22 CYS C 502 CYS C 514 1555 1555 2.03 SSBOND 23 CYS B 22 CYS B 96 1555 1555 2.02 SSBOND 24 CYS B 50 CYS B 108 1555 1555 2.03 LINK ND2 ASN F 31 C1 NAG F 601 1555 1555 1.42 LINK ND2 ASN F 74 C1 NAG F 604 1555 1555 1.42 LINK ND2 ASN F 334 C1 NAG F 602 1555 1555 1.44 LINK ND2 ASN F 349 C1 NAG F 603 1555 1555 1.43 LINK ND2 ASN C 31 C1 NAG C 601 1555 1555 1.43 LINK ND2 ASN C 334 C1 NAG C 602 1555 1555 1.44 LINK ND2 ASN C 349 C1 NAG C 603 1555 1555 1.45 CISPEP 1 GLY F 71 PRO F 72 0 1.67 CISPEP 2 PRO F 81 PRO F 82 0 -19.70 CISPEP 3 GLY F 434 PRO F 435 0 -10.04 CISPEP 4 GLY C 71 PRO C 72 0 0.07 CISPEP 5 PRO C 81 PRO C 82 0 -8.55 CRYST1 95.267 109.233 95.478 90.00 90.70 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010497 0.000000 0.000128 0.00000 SCALE2 0.000000 0.009155 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010474 0.00000