HEADER PROTEIN BINDING 27-OCT-22 8BG2 TITLE CRYSTAL STRUCTURE OF THE SARS-COV-2 S RBD IN COMPLEX WITH PT1580 SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: PT1375 SINGLE-CHAIN FV; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: PT1375 SCFV; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SPIKE PROTEIN S1; COMPND 8 CHAIN: B, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: S2; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 9 2; SOURCE 10 ORGANISM_TAXID: 2697049; SOURCE 11 GENE: S, 2; SOURCE 12 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: S2 KEYWDS PROTEIN BINDING/IMMUNE SYSTEM, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR G.HANSEN,G.L.SSEBYATIKA,T.KREY REVDAT 1 08-NOV-23 8BG2 0 JRNL AUTH C.S.STEIN,G.HANSEN,G.L.SSEBYATIKA,L.STROEH,T.BENECKE,S.MENZ, JRNL AUTH 2 J.-Y.WALDMANN,B.VOLLMER,S.TIPP,O.OCHULOR,E.HEROLD, JRNL AUTH 3 B.SCHWARZLOH,D.MUTSCHALL,J.-Y.ZISCHKE,A.CORDES,W.PUPPE, JRNL AUTH 4 T.SCHNEIDER,I.HINRICHS,R.BLASCZYK,H.KLEINE-WEBER,M.HOFFMANN, JRNL AUTH 5 M.HOEPER,F.K.KAISER,M.GONZALEZ-HERNANDEZ,F.K.ARMANDO, JRNL AUTH 6 M.CIURKIEWICZ,G.BEYTHIEN,S.POEHLMANN,W.BAUMGAERTNER, JRNL AUTH 7 K.GRUENEWALD,A.OSTERHAUS,T.SCHULZ,T.KREY JRNL TITL ACTIVITY OF BROADLY NEUTRALIZING ANTIBODIES AGAINST JRNL TITL 2 SARBECOVIRUSES: A TRADE-OFF BETWEEN SARS-COV-2 VARIANTS AND JRNL TITL 3 DISTANT CORONAVIRUSES? JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.070 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 63650 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7600 - 4.3700 0.97 7298 145 0.1580 0.1909 REMARK 3 2 4.3700 - 3.4700 0.97 7182 138 0.1500 0.1705 REMARK 3 3 3.4700 - 3.0300 0.98 7234 136 0.1784 0.2350 REMARK 3 4 3.0300 - 2.7500 0.97 7163 146 0.2030 0.2631 REMARK 3 5 2.7500 - 2.5500 0.96 7033 142 0.2127 0.2554 REMARK 3 6 2.5500 - 2.4000 0.92 6721 134 0.2321 0.2735 REMARK 3 7 2.4000 - 2.2800 0.91 6682 136 0.2488 0.2963 REMARK 3 8 2.2800 - 2.1800 0.90 6643 118 0.2898 0.3307 REMARK 3 9 2.1800 - 2.1000 0.88 6457 142 0.3164 0.3495 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.276 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.351 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6698 REMARK 3 ANGLE : 0.885 9098 REMARK 3 CHIRALITY : 0.054 978 REMARK 3 PLANARITY : 0.007 1178 REMARK 3 DIHEDRAL : 6.410 946 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 1 THROUGH 245) REMARK 3 ORIGIN FOR THE GROUP (A): -48.3863 34.1495 1.2680 REMARK 3 T TENSOR REMARK 3 T11: 0.2564 T22: 0.1838 REMARK 3 T33: 0.1605 T12: -0.0007 REMARK 3 T13: -0.0207 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.9186 L22: 3.0733 REMARK 3 L33: 1.5088 L12: -0.7217 REMARK 3 L13: -0.4203 L23: 0.3746 REMARK 3 S TENSOR REMARK 3 S11: 0.0668 S12: 0.2466 S13: -0.2520 REMARK 3 S21: -0.1788 S22: -0.0437 S23: 0.2230 REMARK 3 S31: 0.0377 S32: -0.1094 S33: -0.0331 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 335 THROUGH 527) REMARK 3 ORIGIN FOR THE GROUP (A): -34.2939 58.3959 18.3051 REMARK 3 T TENSOR REMARK 3 T11: 0.2400 T22: 0.1680 REMARK 3 T33: 0.2613 T12: -0.0096 REMARK 3 T13: 0.0299 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 2.8586 L22: 1.9707 REMARK 3 L33: 1.5139 L12: -0.3216 REMARK 3 L13: 0.4746 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: -0.1858 S13: 0.3137 REMARK 3 S21: 0.0490 S22: -0.0060 S23: -0.2586 REMARK 3 S31: -0.1614 S32: 0.0741 S33: 0.0018 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 1 THROUGH 245) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8918 77.8267 44.0441 REMARK 3 T TENSOR REMARK 3 T11: 0.1764 T22: 0.1865 REMARK 3 T33: 0.2425 T12: 0.0115 REMARK 3 T13: 0.0206 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 1.8183 L22: 2.6748 REMARK 3 L33: 3.6980 L12: 0.1398 REMARK 3 L13: 0.5702 L23: -1.1586 REMARK 3 S TENSOR REMARK 3 S11: -0.0340 S12: -0.0417 S13: 0.1190 REMARK 3 S21: 0.1532 S22: -0.0436 S23: -0.2272 REMARK 3 S31: -0.1513 S32: 0.2663 S33: 0.0649 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 335 THROUGH 527) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9248 53.7641 40.2793 REMARK 3 T TENSOR REMARK 3 T11: 0.2565 T22: 0.2033 REMARK 3 T33: 0.2120 T12: -0.0093 REMARK 3 T13: 0.0123 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 2.3544 L22: 2.2564 REMARK 3 L33: 1.7914 L12: 0.1901 REMARK 3 L13: 0.8085 L23: -0.4259 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: -0.1454 S13: -0.2198 REMARK 3 S21: -0.1667 S22: 0.0542 S23: 0.1724 REMARK 3 S31: 0.2667 S32: -0.2315 S33: -0.0114 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BG2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292126214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 234717 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 45.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.09489 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 1.21000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7KGJ, 7K8M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PT1580-RBD AT 9,8 MG/ML USING 1.4 M NA REMARK 280 -TARTRATE, 100 MM TRIS PH 8.5 AS RESERVOIR, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.95000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 120 REMARK 465 THR A 121 REMARK 465 GLY A 122 REMARK 465 GLY A 123 REMARK 465 SER A 124 REMARK 465 GLY A 125 REMARK 465 GLY A 126 REMARK 465 GLY A 127 REMARK 465 GLY A 128 REMARK 465 SER A 129 REMARK 465 GLY A 130 REMARK 465 GLY A 131 REMARK 465 GLY A 132 REMARK 465 GLY A 133 REMARK 465 SER A 134 REMARK 465 GLY A 135 REMARK 465 GLY A 136 REMARK 465 GLY A 137 REMARK 465 LYS A 246 REMARK 465 ASP A 247 REMARK 465 ASP A 248 REMARK 465 ASP A 249 REMARK 465 ASP A 250 REMARK 465 LYS A 251 REMARK 465 ASN B 334 REMARK 465 ASP B 528 REMARK 465 ASP B 529 REMARK 465 ASP B 530 REMARK 465 ASP B 531 REMARK 465 LYS B 532 REMARK 465 GLY C 120 REMARK 465 THR C 121 REMARK 465 GLY C 122 REMARK 465 GLY C 123 REMARK 465 SER C 124 REMARK 465 GLY C 125 REMARK 465 GLY C 126 REMARK 465 GLY C 127 REMARK 465 GLY C 128 REMARK 465 SER C 129 REMARK 465 GLY C 130 REMARK 465 GLY C 131 REMARK 465 GLY C 132 REMARK 465 GLY C 133 REMARK 465 SER C 134 REMARK 465 GLY C 135 REMARK 465 GLY C 136 REMARK 465 GLY C 137 REMARK 465 LYS C 246 REMARK 465 ASP C 247 REMARK 465 ASP C 248 REMARK 465 ASP C 249 REMARK 465 ASP C 250 REMARK 465 LYS C 251 REMARK 465 ASN D 334 REMARK 465 ASP D 528 REMARK 465 ASP D 529 REMARK 465 ASP D 530 REMARK 465 ASP D 531 REMARK 465 LYS D 532 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 104 144.30 89.16 REMARK 500 ALA A 190 -31.36 72.31 REMARK 500 PHE B 377 85.33 -152.49 REMARK 500 ASN B 422 -58.31 -127.67 REMARK 500 HIS C 104 146.94 84.08 REMARK 500 ALA C 190 -32.49 69.94 REMARK 500 ALA D 352 43.02 -109.62 REMARK 500 PHE D 377 87.25 -154.88 REMARK 500 ASN D 422 -62.19 -128.20 REMARK 500 ASN D 487 18.39 57.40 REMARK 500 HIS D 519 48.33 -79.89 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BG2 A 1 251 PDB 8BG2 8BG2 1 251 DBREF 8BG2 B 334 527 UNP P0DTC2 SPIKE_SARS2 334 527 DBREF 8BG2 C 1 251 PDB 8BG2 8BG2 1 251 DBREF 8BG2 D 334 527 UNP P0DTC2 SPIKE_SARS2 334 527 SEQADV 8BG2 ASP B 528 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP B 529 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP B 530 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP B 531 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 LYS B 532 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP D 528 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP D 529 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP D 530 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 ASP D 531 UNP P0DTC2 EXPRESSION TAG SEQADV 8BG2 LYS D 532 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 251 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 A 251 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 251 PHE ILE VAL SER ARG ASN TYR MET SER TRP VAL ARG GLN SEQRES 4 A 251 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE TYR SEQRES 5 A 251 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 A 251 ARG PHE THR ILE SER ARG ASP SER SER LYS ASN THR LEU SEQRES 7 A 251 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 A 251 VAL TYR TYR CYS ALA LYS ASP VAL PRO LEU GLY SER HIS SEQRES 9 A 251 TYR PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 A 251 SER SER GLY THR GLY GLY SER GLY GLY GLY GLY SER GLY SEQRES 11 A 251 GLY GLY GLY SER GLY GLY GLY GLY GLU ILE VAL LEU THR SEQRES 12 A 251 GLN SER PRO GLY THR LEU SER LEU SER PRO GLY GLU ARG SEQRES 13 A 251 VAL THR LEU SER CYS ARG ALA SER GLN SER VAL SER ILE SEQRES 14 A 251 ASN TYR LEU ALA TRP TYR GLN GLN LYS PRO GLY GLN ALA SEQRES 15 A 251 PRO ARG LEU LEU ILE TYR GLY ALA SER SER ARG ALA THR SEQRES 16 A 251 GLY ILE SER ASP ARG PHE SER GLY SER GLY SER GLY THR SEQRES 17 A 251 ASP PHE THR LEU THR ILE SER ARG LEU GLU PRO GLU ASP SEQRES 18 A 251 PHE ALA VAL TYR TYR CYS GLN GLN TYR ASP SER SER PRO SEQRES 19 A 251 LEU THR PHE GLY GLY GLY THR LYS VAL GLU ILE LYS ASP SEQRES 20 A 251 ASP ASP ASP LYS SEQRES 1 B 199 ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR ARG SEQRES 2 B 199 PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SER SEQRES 3 B 199 ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER ALA SEQRES 4 B 199 SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO THR SEQRES 5 B 199 LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SEQRES 6 B 199 SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA SEQRES 7 B 199 PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR LYS SEQRES 8 B 199 LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SEQRES 9 B 199 SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR ASN SEQRES 10 B 199 TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS PRO SEQRES 11 B 199 PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA GLY SEQRES 12 B 199 SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR SEQRES 13 B 199 PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN GLY SEQRES 14 B 199 VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE SEQRES 15 B 199 GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO ASP SEQRES 16 B 199 ASP ASP ASP LYS SEQRES 1 C 251 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 C 251 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 251 PHE ILE VAL SER ARG ASN TYR MET SER TRP VAL ARG GLN SEQRES 4 C 251 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER GLY ILE TYR SEQRES 5 C 251 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 C 251 ARG PHE THR ILE SER ARG ASP SER SER LYS ASN THR LEU SEQRES 7 C 251 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 C 251 VAL TYR TYR CYS ALA LYS ASP VAL PRO LEU GLY SER HIS SEQRES 9 C 251 TYR PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 C 251 SER SER GLY THR GLY GLY SER GLY GLY GLY GLY SER GLY SEQRES 11 C 251 GLY GLY GLY SER GLY GLY GLY GLY GLU ILE VAL LEU THR SEQRES 12 C 251 GLN SER PRO GLY THR LEU SER LEU SER PRO GLY GLU ARG SEQRES 13 C 251 VAL THR LEU SER CYS ARG ALA SER GLN SER VAL SER ILE SEQRES 14 C 251 ASN TYR LEU ALA TRP TYR GLN GLN LYS PRO GLY GLN ALA SEQRES 15 C 251 PRO ARG LEU LEU ILE TYR GLY ALA SER SER ARG ALA THR SEQRES 16 C 251 GLY ILE SER ASP ARG PHE SER GLY SER GLY SER GLY THR SEQRES 17 C 251 ASP PHE THR LEU THR ILE SER ARG LEU GLU PRO GLU ASP SEQRES 18 C 251 PHE ALA VAL TYR TYR CYS GLN GLN TYR ASP SER SER PRO SEQRES 19 C 251 LEU THR PHE GLY GLY GLY THR LYS VAL GLU ILE LYS ASP SEQRES 20 C 251 ASP ASP ASP LYS SEQRES 1 D 199 ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR ARG SEQRES 2 D 199 PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SER SEQRES 3 D 199 ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER ALA SEQRES 4 D 199 SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO THR SEQRES 5 D 199 LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SEQRES 6 D 199 SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA SEQRES 7 D 199 PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR LYS SEQRES 8 D 199 LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SEQRES 9 D 199 SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR ASN SEQRES 10 D 199 TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS PRO SEQRES 11 D 199 PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA GLY SEQRES 12 D 199 SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR SEQRES 13 D 199 PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN GLY SEQRES 14 D 199 VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE SEQRES 15 D 199 GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO ASP SEQRES 16 D 199 ASP ASP ASP LYS HET NAG B1000 14 HET NAG D1000 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 7 HOH *441(H2 O) HELIX 1 AA1 ILE A 28 ASN A 32 5 5 HELIX 2 AA2 ARG A 86 THR A 90 5 5 HELIX 3 AA3 GLU A 218 PHE A 222 5 5 HELIX 4 AA4 PRO B 337 ASN B 343 1 7 HELIX 5 AA5 SER B 349 TRP B 353 5 5 HELIX 6 AA6 ASP B 364 ASN B 370 1 7 HELIX 7 AA7 SER B 383 ASN B 388 1 6 HELIX 8 AA8 ASP B 405 ILE B 410 5 6 HELIX 9 AA9 GLY B 416 ASN B 422 1 7 HELIX 10 AB1 SER B 438 SER B 443 1 6 HELIX 11 AB2 GLY B 502 TYR B 505 5 4 HELIX 12 AB3 ILE C 28 ASN C 32 5 5 HELIX 13 AB4 SER C 73 LYS C 75 5 3 HELIX 14 AB5 ARG C 86 THR C 90 5 5 HELIX 15 AB6 GLU C 218 PHE C 222 5 5 HELIX 16 AB7 PRO D 337 ASN D 343 1 7 HELIX 17 AB8 SER D 349 TRP D 353 5 5 HELIX 18 AB9 ASP D 364 SER D 371 1 8 HELIX 19 AC1 SER D 383 ASN D 388 1 6 HELIX 20 AC2 ASP D 405 ILE D 410 5 6 HELIX 21 AC3 GLY D 416 ASN D 422 1 7 HELIX 22 AC4 SER D 438 SER D 443 1 6 HELIX 23 AC5 GLY D 502 TYR D 505 5 4 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 21 N SER A 7 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O MET A 82 N LEU A 18 SHEET 4 AA1 4 PHE A 67 ASP A 72 -1 N SER A 70 O TYR A 79 SHEET 1 AA2 6 GLY A 10 ILE A 12 0 SHEET 2 AA2 6 THR A 113 VAL A 117 1 O THR A 116 N ILE A 12 SHEET 3 AA2 6 ALA A 91 VAL A 99 -1 N TYR A 93 O THR A 113 SHEET 4 AA2 6 MET A 34 ALA A 40 -1 N VAL A 37 O TYR A 94 SHEET 5 AA2 6 GLY A 44 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 THR A 57 TYR A 59 -1 O PHE A 58 N GLY A 50 SHEET 1 AA3 4 GLY A 10 ILE A 12 0 SHEET 2 AA3 4 THR A 113 VAL A 117 1 O THR A 116 N ILE A 12 SHEET 3 AA3 4 ALA A 91 VAL A 99 -1 N TYR A 93 O THR A 113 SHEET 4 AA3 4 TYR A 105 TRP A 109 -1 O TYR A 105 N VAL A 99 SHEET 1 AA4 3 LEU A 142 SER A 145 0 SHEET 2 AA4 3 VAL A 157 VAL A 167 -1 O ARG A 162 N THR A 143 SHEET 3 AA4 3 PHE A 201 ILE A 214 -1 O LEU A 212 N LEU A 159 SHEET 1 AA5 6 THR A 148 SER A 150 0 SHEET 2 AA5 6 THR A 241 GLU A 244 1 O LYS A 242 N LEU A 149 SHEET 3 AA5 6 ALA A 223 GLN A 229 -1 N ALA A 223 O VAL A 243 SHEET 4 AA5 6 LEU A 172 GLN A 177 -1 N ALA A 173 O GLN A 228 SHEET 5 AA5 6 ARG A 184 TYR A 188 -1 O LEU A 186 N TRP A 174 SHEET 6 AA5 6 SER A 192 ARG A 193 -1 O SER A 192 N TYR A 188 SHEET 1 AA6 4 THR A 148 SER A 150 0 SHEET 2 AA6 4 THR A 241 GLU A 244 1 O LYS A 242 N LEU A 149 SHEET 3 AA6 4 ALA A 223 GLN A 229 -1 N ALA A 223 O VAL A 243 SHEET 4 AA6 4 THR A 236 PHE A 237 -1 O THR A 236 N GLN A 229 SHEET 1 AA7 5 ASN B 354 ILE B 358 0 SHEET 2 AA7 5 VAL B 395 ARG B 403 -1 O VAL B 395 N ILE B 358 SHEET 3 AA7 5 PRO B 507 SER B 514 -1 O VAL B 512 N ASP B 398 SHEET 4 AA7 5 GLY B 431 ASN B 437 -1 N ILE B 434 O VAL B 511 SHEET 5 AA7 5 THR B 376 TYR B 380 -1 N TYR B 380 O GLY B 431 SHEET 1 AA8 2 CYS B 361 VAL B 362 0 SHEET 2 AA8 2 VAL B 524 CYS B 525 1 O CYS B 525 N CYS B 361 SHEET 1 AA9 2 LEU B 452 ARG B 454 0 SHEET 2 AA9 2 LEU B 492 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AB1 2 TYR B 473 GLN B 474 0 SHEET 2 AB1 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SHEET 1 AB2 4 GLN C 3 SER C 7 0 SHEET 2 AB2 4 LEU C 18 SER C 25 -1 O ALA C 23 N VAL C 5 SHEET 3 AB2 4 THR C 77 MET C 82 -1 O MET C 82 N LEU C 18 SHEET 4 AB2 4 PHE C 67 ASP C 72 -1 N THR C 68 O GLN C 81 SHEET 1 AB3 6 GLY C 10 ILE C 12 0 SHEET 2 AB3 6 THR C 113 VAL C 117 1 O THR C 116 N GLY C 10 SHEET 3 AB3 6 ALA C 91 VAL C 99 -1 N TYR C 93 O THR C 113 SHEET 4 AB3 6 MET C 34 ALA C 40 -1 N VAL C 37 O TYR C 94 SHEET 5 AB3 6 GLY C 44 ILE C 51 -1 O ILE C 51 N MET C 34 SHEET 6 AB3 6 THR C 57 TYR C 59 -1 O PHE C 58 N GLY C 50 SHEET 1 AB4 4 GLY C 10 ILE C 12 0 SHEET 2 AB4 4 THR C 113 VAL C 117 1 O THR C 116 N GLY C 10 SHEET 3 AB4 4 ALA C 91 VAL C 99 -1 N TYR C 93 O THR C 113 SHEET 4 AB4 4 TYR C 105 TRP C 109 -1 O TYR C 105 N VAL C 99 SHEET 1 AB5 3 LEU C 142 SER C 145 0 SHEET 2 AB5 3 VAL C 157 VAL C 167 -1 O ARG C 162 N THR C 143 SHEET 3 AB5 3 PHE C 201 ILE C 214 -1 O LEU C 212 N LEU C 159 SHEET 1 AB6 6 THR C 148 SER C 150 0 SHEET 2 AB6 6 THR C 241 GLU C 244 1 O GLU C 244 N LEU C 149 SHEET 3 AB6 6 ALA C 223 GLN C 229 -1 N ALA C 223 O VAL C 243 SHEET 4 AB6 6 LEU C 172 GLN C 177 -1 N ALA C 173 O GLN C 228 SHEET 5 AB6 6 PRO C 183 TYR C 188 -1 O LEU C 186 N TRP C 174 SHEET 6 AB6 6 SER C 192 ARG C 193 -1 O SER C 192 N TYR C 188 SHEET 1 AB7 4 THR C 148 SER C 150 0 SHEET 2 AB7 4 THR C 241 GLU C 244 1 O GLU C 244 N LEU C 149 SHEET 3 AB7 4 ALA C 223 GLN C 229 -1 N ALA C 223 O VAL C 243 SHEET 4 AB7 4 THR C 236 PHE C 237 -1 O THR C 236 N GLN C 229 SHEET 1 AB8 5 ASN D 354 ILE D 358 0 SHEET 2 AB8 5 ASN D 394 ARG D 403 -1 O VAL D 395 N ILE D 358 SHEET 3 AB8 5 PRO D 507 GLU D 516 -1 O TYR D 508 N ILE D 402 SHEET 4 AB8 5 GLY D 431 ASN D 437 -1 N ILE D 434 O VAL D 511 SHEET 5 AB8 5 THR D 376 TYR D 380 -1 N TYR D 380 O GLY D 431 SHEET 1 AB9 3 CYS D 361 VAL D 362 0 SHEET 2 AB9 3 VAL D 524 CYS D 525 1 O CYS D 525 N CYS D 361 SHEET 3 AB9 3 CYS D 391 PHE D 392 -1 N PHE D 392 O VAL D 524 SHEET 1 AC1 2 LEU D 452 ARG D 454 0 SHEET 2 AC1 2 LEU D 492 SER D 494 -1 O GLN D 493 N TYR D 453 SHEET 1 AC2 2 TYR D 473 GLN D 474 0 SHEET 2 AC2 2 CYS D 488 TYR D 489 -1 O TYR D 489 N TYR D 473 SSBOND 1 CYS A 22 CYS A 95 1555 1555 2.08 SSBOND 2 CYS A 161 CYS A 227 1555 1555 2.10 SSBOND 3 CYS B 336 CYS B 361 1555 1555 2.05 SSBOND 4 CYS B 379 CYS B 432 1555 1555 2.09 SSBOND 5 CYS B 391 CYS B 525 1555 1555 2.06 SSBOND 6 CYS B 480 CYS B 488 1555 1555 2.06 SSBOND 7 CYS C 22 CYS C 95 1555 1555 2.08 SSBOND 8 CYS C 161 CYS C 227 1555 1555 2.10 SSBOND 9 CYS D 336 CYS D 361 1555 1555 2.04 SSBOND 10 CYS D 379 CYS D 432 1555 1555 2.07 SSBOND 11 CYS D 391 CYS D 525 1555 1555 2.06 SSBOND 12 CYS D 480 CYS D 488 1555 1555 2.05 LINK ND2 ASN B 343 C1 NAG B1000 1555 1555 1.44 LINK ND2 ASN D 343 C1 NAG D1000 1555 1555 1.44 CISPEP 1 SER A 145 PRO A 146 0 -7.36 CISPEP 2 SER A 233 PRO A 234 0 -2.06 CISPEP 3 SER C 145 PRO C 146 0 -8.96 CISPEP 4 SER C 233 PRO C 234 0 -4.65 CRYST1 87.046 85.900 88.198 90.00 117.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011488 0.000000 0.005864 0.00000 SCALE2 0.000000 0.011641 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012730 0.00000