HEADER STRUCTURAL PROTEIN 28-OCT-22 8BGQ OBSLTE 14-FEB-24 8BGQ 8Q5Z TITLE CRYSTAL STRUCTURE OF HUMAN THIOSULFATE SULFURTRANSFERASE AMINO ACID 1- TITLE 2 291 IN HIGH RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOSULFATE SULFURTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RHODANESE; COMPND 5 EC: 2.8.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TST; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MITOCHONDRIAL ENZYME, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.V.GOO,M.R.GROVES,Z.M.AL-DAHMANI,C.WANG REVDAT 2 14-FEB-24 8BGQ 1 OBSLTE REVDAT 1 09-NOV-22 8BGQ 0 JRNL AUTH Z.M.AL-DAHMANI,M.R.GROVES,H.V.GOO JRNL TITL CRYSTAL STRUCTURE OF HUMAN THIOSULFATE SULFURTRANSFERASE JRNL TITL 2 AMINO ACID 2-297 IN HIGH RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 74.9 REMARK 3 NUMBER OF REFLECTIONS : 60248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.036 REMARK 3 FREE R VALUE TEST SET COUNT : 3034 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.28 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1006 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 17.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2315 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 327 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00500 REMARK 3 B22 (A**2) : 0.09100 REMARK 3 B33 (A**2) : -0.06800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.058 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.157 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2383 ; 0.017 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2175 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3235 ; 1.894 ; 1.645 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5009 ; 1.600 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 290 ; 6.202 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 135 ;26.784 ;20.519 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 376 ;11.175 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;15.752 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2703 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 588 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 468 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 48 ; 0.391 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1175 ; 0.191 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 185 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1163 ; 0.688 ; 0.692 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1162 ; 0.683 ; 0.691 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1452 ; 1.059 ; 1.040 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1453 ; 1.060 ; 1.041 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1220 ; 1.703 ; 0.881 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1221 ; 1.703 ; 0.882 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1783 ; 2.445 ; 1.252 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1784 ; 2.444 ; 1.253 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 291 REMARK 3 ORIGIN FOR THE GROUP (A): -10.8689 -24.9502 -22.2988 REMARK 3 T TENSOR REMARK 3 T11: 0.0008 T22: 0.0072 REMARK 3 T33: 0.0039 T12: -0.0022 REMARK 3 T13: 0.0017 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.3689 L22: 0.5235 REMARK 3 L33: 0.6370 L12: -0.1472 REMARK 3 L13: 0.1970 L23: -0.2749 REMARK 3 S TENSOR REMARK 3 S11: 0.0012 S12: -0.0143 S13: 0.0044 REMARK 3 S21: -0.0027 S22: 0.0003 S23: -0.0047 REMARK 3 S31: -0.0008 S32: -0.0046 S33: -0.0015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8BGQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292126312. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60249 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.279 REMARK 200 RESOLUTION RANGE LOW (A) : 38.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.1 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 7.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 38.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 0.04500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8AGF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6 000, TRIS, CALCIUM CHLORIDE REMARK 280 DIHYDRATE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 11.37665 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.75300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.08288 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 11.37665 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.75300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 76.08288 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 SD CE REMARK 470 ILE A 20 CD1 REMARK 470 THR A 22 OG1 CG2 REMARK 470 LEU A 25 CD1 CD2 REMARK 470 HIS A 103 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 387 O HOH A 539 2.14 REMARK 500 O HOH A 386 O HOH A 590 2.15 REMARK 500 SG CYS A 248 O HOH A 551 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HD2 HIS A 103 HH22 ARG A 147 4444 1.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 102 CB GLU A 102 CG 0.154 REMARK 500 GLU A 102 CD GLU A 102 OE1 -0.156 REMARK 500 GLU A 166 CD GLU A 166 OE2 0.114 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 THR A 123 OG1 - CB - CG2 ANGL. DEV. = -17.0 DEGREES REMARK 500 ARG A 230 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 230 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 41 -126.80 -116.34 REMARK 500 PHE A 107 -73.03 -142.93 REMARK 500 CYS A 248 -139.11 -160.00 REMARK 500 LYS A 250 11.42 -145.48 REMARK 500 VAL A 252 -64.74 -97.15 REMARK 500 SER A 275 -162.16 58.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BGQ A 1 291 UNP Q16762 THTR_HUMAN 1 291 SEQADV 8BGQ PHE A 277 UNP Q16762 SER 277 CONFLICT SEQADV 8BGQ HIS A 281 UNP Q16762 ARG 281 CONFLICT SEQADV 8BGQ TRP A 288 UNP Q16762 ARG 288 CONFLICT SEQRES 1 A 291 MET VAL HIS GLN VAL LEU TYR ARG ALA LEU VAL SER THR SEQRES 2 A 291 LYS TRP LEU ALA GLU SER ILE ARG THR GLY LYS LEU GLY SEQRES 3 A 291 PRO GLY LEU ARG VAL LEU ASP ALA SER TRP TYR SER PRO SEQRES 4 A 291 GLY THR ARG GLU ALA ARG LYS GLU TYR LEU GLU ARG HIS SEQRES 5 A 291 VAL PRO GLY ALA SER PHE PHE ASP ILE GLU GLU CYS ARG SEQRES 6 A 291 ASP THR ALA SER PRO TYR GLU MET MET LEU PRO SER GLU SEQRES 7 A 291 ALA GLY PHE ALA GLU TYR VAL GLY ARG LEU GLY ILE SER SEQRES 8 A 291 ASN HIS THR HIS VAL VAL VAL TYR ASP GLY GLU HIS LEU SEQRES 9 A 291 GLY SER PHE TYR ALA PRO ARG VAL TRP TRP MET PHE ARG SEQRES 10 A 291 VAL PHE GLY HIS ARG THR VAL SER VAL LEU ASN GLY GLY SEQRES 11 A 291 PHE ARG ASN TRP LEU LYS GLU GLY HIS PRO VAL THR SER SEQRES 12 A 291 GLU PRO SER ARG PRO GLU PRO ALA VAL PHE LYS ALA THR SEQRES 13 A 291 LEU ASP ARG SER LEU LEU LYS THR TYR GLU GLN VAL LEU SEQRES 14 A 291 GLU ASN LEU GLU SER LYS ARG PHE GLN LEU VAL ASP SER SEQRES 15 A 291 ARG SER GLN GLY ARG PHE LEU GLY THR GLU PRO GLU PRO SEQRES 16 A 291 ASP ALA VAL GLY LEU ASP SER GLY HIS ILE ARG GLY ALA SEQRES 17 A 291 VAL ASN MET PRO PHE MET ASP PHE LEU THR GLU ASP GLY SEQRES 18 A 291 PHE GLU LYS GLY PRO GLU GLU LEU ARG ALA LEU PHE GLN SEQRES 19 A 291 THR LYS LYS VAL ASP LEU SER GLN PRO LEU ILE ALA THR SEQRES 20 A 291 CYS ARG LYS GLY VAL THR ALA CYS HIS VAL ALA LEU ALA SEQRES 21 A 291 ALA TYR LEU CYS GLY LYS PRO ASP VAL ALA VAL TYR ASP SEQRES 22 A 291 GLY SER TRP PHE GLU TRP PHE HIS ARG ALA PRO PRO GLU SEQRES 23 A 291 SER TRP VAL SER GLN FORMUL 2 HOH *327(H2 O) HELIX 1 AA1 SER A 12 THR A 22 1 11 HELIX 2 AA2 GLU A 43 ARG A 51 1 9 HELIX 3 AA3 SER A 77 LEU A 88 1 12 HELIX 4 AA4 TYR A 108 PHE A 119 1 12 HELIX 5 AA5 GLY A 129 GLU A 137 1 9 HELIX 6 AA6 ASP A 158 SER A 160 5 3 HELIX 7 AA7 THR A 164 LYS A 175 1 12 HELIX 8 AA8 SER A 184 LEU A 189 1 6 HELIX 9 AA9 PRO A 212 LEU A 217 5 6 HELIX 10 AB1 GLY A 225 LYS A 236 1 12 HELIX 11 AB2 THR A 253 CYS A 264 1 12 HELIX 12 AB3 GLY A 274 ALA A 283 1 10 HELIX 13 AB4 PRO A 284 GLU A 286 5 3 SHEET 1 AA1 5 LEU A 10 VAL A 11 0 SHEET 2 AA1 5 VAL A 124 LEU A 127 1 O VAL A 126 N VAL A 11 SHEET 3 AA1 5 HIS A 95 TYR A 99 1 N VAL A 98 O LEU A 127 SHEET 4 AA1 5 LEU A 29 ASP A 33 1 N LEU A 32 O VAL A 97 SHEET 5 AA1 5 SER A 57 PHE A 58 1 O SER A 57 N VAL A 31 SHEET 1 AA2 5 LEU A 162 LYS A 163 0 SHEET 2 AA2 5 ALA A 270 TYR A 272 1 O VAL A 271 N LYS A 163 SHEET 3 AA2 5 LEU A 244 THR A 247 1 N ALA A 246 O TYR A 272 SHEET 4 AA2 5 GLN A 178 ASP A 181 1 N GLN A 178 O ILE A 245 SHEET 5 AA2 5 VAL A 209 ASN A 210 1 O VAL A 209 N ASP A 181 SHEET 1 AA3 2 HIS A 204 ILE A 205 0 SHEET 2 AA3 2 TRP A 288 VAL A 289 -1 O VAL A 289 N HIS A 204 CRYST1 41.863 49.506 153.361 90.00 97.16 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023887 0.000000 0.003000 0.00000 SCALE2 0.000000 0.020200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006572 0.00000