HEADER TRANSFERASE 02-NOV-22 8BIC TITLE O-METHYLTRANSFERASE PLU4891 IN COMPLEX WITH SAH COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYLTRANSFERASE PLU4891; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHOTORHABDUS LAUMONDII SUBSP. LAUMONDII TTO1; SOURCE 3 ORGANISM_TAXID: 243265; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS METHYLTRANSFERASE, POLYKETIDE, ANTHRAQUINONE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.M.HUBER,M.GROLL REVDAT 5 07-FEB-24 8BIC 1 REMARK REVDAT 4 15-NOV-23 8BIC 1 SOURCE REVDAT 3 17-MAY-23 8BIC 1 JRNL REVDAT 2 05-APR-23 8BIC 1 JRNL REVDAT 1 08-MAR-23 8BIC 0 JRNL AUTH E.M.HUBER,L.KRELING,A.K.HEINRICH,M.DUNNEBACKE,A.POTHIG, JRNL AUTH 2 H.B.BODE,M.GROLL JRNL TITL A SET OF CLOSELY RELATED METHYLTRANSFERASES FOR JRNL TITL 2 SITE-SPECIFIC TAILORING OF ANTHRAQUINONE PIGMENTS. JRNL REF STRUCTURE V. 31 573 2023 JRNL REFN ISSN 0969-2126 JRNL PMID 36963398 JRNL DOI 10.1016/J.STR.2023.03.001 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 63854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3361 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4715 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.4310 REMARK 3 BIN FREE R VALUE SET COUNT : 248 REMARK 3 BIN FREE R VALUE : 0.4190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5137 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 252 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.67000 REMARK 3 B22 (A**2) : 6.25000 REMARK 3 B33 (A**2) : -3.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -3.93000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.222 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.584 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5345 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4963 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7219 ; 1.202 ; 1.624 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11554 ; 1.184 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 650 ; 6.237 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;34.752 ;23.955 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 984 ;13.953 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;16.951 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 695 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5917 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1077 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10306 ; 4.478 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0557 28.6821 28.7417 REMARK 3 T TENSOR REMARK 3 T11: 0.0198 T22: 0.0106 REMARK 3 T33: 0.0650 T12: -0.0003 REMARK 3 T13: 0.0103 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.0310 L22: 0.0455 REMARK 3 L33: 0.3772 L12: -0.0202 REMARK 3 L13: 0.0092 L23: -0.0189 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.0150 S13: -0.0019 REMARK 3 S21: -0.0128 S22: -0.0014 S23: 0.0072 REMARK 3 S31: -0.0202 S32: -0.0205 S33: -0.0017 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -5 B 401 REMARK 3 ORIGIN FOR THE GROUP (A): 2.2672 22.5115 64.2328 REMARK 3 T TENSOR REMARK 3 T11: 0.0233 T22: 0.0004 REMARK 3 T33: 0.0654 T12: 0.0003 REMARK 3 T13: 0.0120 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.0543 L22: 0.0527 REMARK 3 L33: 0.2421 L12: 0.0161 REMARK 3 L13: -0.0884 L23: -0.0288 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: -0.0012 S13: -0.0075 REMARK 3 S21: 0.0119 S22: -0.0039 S23: -0.0005 REMARK 3 S31: -0.0009 S32: -0.0001 S33: 0.0047 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 8BIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292126333. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67228 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.56200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8BGT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1 M D/L MALIC ACID, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.14000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.97000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.14000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.97000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 530 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ARG A -16 REMARK 465 GLY A -15 REMARK 465 SER A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 LYS A 317 REMARK 465 MET B -17 REMARK 465 ARG B -16 REMARK 465 GLY B -15 REMARK 465 SER B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 66 105.89 -52.50 REMARK 500 LYS A 261 -61.32 -171.00 REMARK 500 LYS B 261 -90.46 -128.14 REMARK 500 LYS B 263 67.08 -66.86 REMARK 500 LEU B 278 -1.21 -141.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 275 OD1 REMARK 620 2 LEU A 279 O 117.6 REMARK 620 3 GLY A 280 O 99.4 72.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 18 O REMARK 620 2 SER B 24 OG 131.2 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8BGT RELATED DB: PDB DBREF1 8BIC A 1 317 UNP A0A6L9JRI9_PHOLM DBREF2 8BIC A A0A6L9JRI9 1 317 DBREF1 8BIC B 1 317 UNP A0A6L9JRI9_PHOLM DBREF2 8BIC B A0A6L9JRI9 1 317 SEQADV 8BIC MET A -17 UNP A0A6L9JRI INITIATING METHIONINE SEQADV 8BIC ARG A -16 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLY A -15 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC SER A -14 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS A -13 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS A -12 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS A -11 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS A -10 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS A -9 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS A -8 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLU A -7 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC ASN A -6 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC LEU A -5 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC TYR A -4 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC PHE A -3 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLN A -2 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLY A -1 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC SER A 0 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC MET B -17 UNP A0A6L9JRI INITIATING METHIONINE SEQADV 8BIC ARG B -16 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLY B -15 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC SER B -14 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS B -13 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS B -12 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS B -11 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS B -10 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS B -9 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC HIS B -8 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLU B -7 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC ASN B -6 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC LEU B -5 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC TYR B -4 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC PHE B -3 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLN B -2 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC GLY B -1 UNP A0A6L9JRI EXPRESSION TAG SEQADV 8BIC SER B 0 UNP A0A6L9JRI EXPRESSION TAG SEQRES 1 A 335 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 A 335 TYR PHE GLN GLY SER MET LEU ILE ASP LEU ILE THR SER SEQRES 3 A 335 CYS ARG LYS SER THR VAL ILE TYR ALA PHE VAL ASP MET SEQRES 4 A 335 GLY LEU SER VAL HIS PHE LYS ASP GLY ALA CYS VAL ASN SEQRES 5 A 335 ILE SER GLU LEU ALA SER GLN TYR GLY LEU ASP HIS SER SEQRES 6 A 335 ARG PHE SER ARG LEU CYS GLU TYR LEU ILE LYS ILE GLY SEQRES 7 A 335 VAL LEU VAL SER CYS ASN GLU GLY VAL ALA LEU SER GLU SEQRES 8 A 335 GLU CYS SER ALA LEU ALA ASP PRO GLU SER MET GLU SER SEQRES 9 A 335 LEU MET ILE ARG CYS GLU VAL SER PRO GLU TYR TRP LYS SEQRES 10 A 335 ALA TRP SER MET TYR SER LYS SER LEU TYR GLU ASN ASN SEQRES 11 A 335 SER LYS THR ALA PHE GLU ILE ALA HIS GLY LYS PRO PHE SEQRES 12 A 335 PHE GLU TYR LEU ASP HIS HIS GLU LEU PHE ARG SER ASN SEQRES 13 A 335 PHE ASP SER PHE MET SER LYS ASN SER ASP LYS ILE ILE SEQRES 14 A 335 GLU LYS LEU LEU ASP ILE TYR ASP PHE SER GLN HIS ASN SEQRES 15 A 335 ARG ILE LEU ASP VAL GLY GLY GLY GLU GLY ASN LEU LEU SEQRES 16 A 335 ILE ARG ILE ASN GLU LYS ILE LYS GLY LYS HIS TYR ALA SEQRES 17 A 335 VAL LEU ASP ARG TYR ASN GLU THR PRO VAL LEU GLU ASP SEQRES 18 A 335 ILE GLU PHE ILE ASN GLY ASP PHE PHE LYS LEU VAL PRO SEQRES 19 A 335 SER GLY TYR ASP LEU TYR ILE LEU LYS ASN VAL ILE HIS SEQRES 20 A 335 ASN TRP SER ASP SER ASN ALA ILE LEU ILE LEU GLU ASN SEQRES 21 A 335 CYS ARG LYS ALA MET ASP ASP ASN ALA THR ILE LEU LEU SEQRES 22 A 335 ILE GLY THR VAL LYS LYS LEU LYS LEU GLU ILE ILE ASP SEQRES 23 A 335 SER THR ASP ILE LEU MET ASP VAL LEU LEU LEU GLY LYS SEQRES 24 A 335 GLU ARG TYR LEU ASN GLU LEU GLU ASP LEU ALA HIS GLN SEQRES 25 A 335 ALA GLY PHE VAL VAL LYS ASP ILE LYS GLU ILE ASN GLU SEQRES 26 A 335 LYS TYR SER ILE ILE GLU LEU GLY VAL LYS SEQRES 1 B 335 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 B 335 TYR PHE GLN GLY SER MET LEU ILE ASP LEU ILE THR SER SEQRES 3 B 335 CYS ARG LYS SER THR VAL ILE TYR ALA PHE VAL ASP MET SEQRES 4 B 335 GLY LEU SER VAL HIS PHE LYS ASP GLY ALA CYS VAL ASN SEQRES 5 B 335 ILE SER GLU LEU ALA SER GLN TYR GLY LEU ASP HIS SER SEQRES 6 B 335 ARG PHE SER ARG LEU CYS GLU TYR LEU ILE LYS ILE GLY SEQRES 7 B 335 VAL LEU VAL SER CYS ASN GLU GLY VAL ALA LEU SER GLU SEQRES 8 B 335 GLU CYS SER ALA LEU ALA ASP PRO GLU SER MET GLU SER SEQRES 9 B 335 LEU MET ILE ARG CYS GLU VAL SER PRO GLU TYR TRP LYS SEQRES 10 B 335 ALA TRP SER MET TYR SER LYS SER LEU TYR GLU ASN ASN SEQRES 11 B 335 SER LYS THR ALA PHE GLU ILE ALA HIS GLY LYS PRO PHE SEQRES 12 B 335 PHE GLU TYR LEU ASP HIS HIS GLU LEU PHE ARG SER ASN SEQRES 13 B 335 PHE ASP SER PHE MET SER LYS ASN SER ASP LYS ILE ILE SEQRES 14 B 335 GLU LYS LEU LEU ASP ILE TYR ASP PHE SER GLN HIS ASN SEQRES 15 B 335 ARG ILE LEU ASP VAL GLY GLY GLY GLU GLY ASN LEU LEU SEQRES 16 B 335 ILE ARG ILE ASN GLU LYS ILE LYS GLY LYS HIS TYR ALA SEQRES 17 B 335 VAL LEU ASP ARG TYR ASN GLU THR PRO VAL LEU GLU ASP SEQRES 18 B 335 ILE GLU PHE ILE ASN GLY ASP PHE PHE LYS LEU VAL PRO SEQRES 19 B 335 SER GLY TYR ASP LEU TYR ILE LEU LYS ASN VAL ILE HIS SEQRES 20 B 335 ASN TRP SER ASP SER ASN ALA ILE LEU ILE LEU GLU ASN SEQRES 21 B 335 CYS ARG LYS ALA MET ASP ASP ASN ALA THR ILE LEU LEU SEQRES 22 B 335 ILE GLY THR VAL LYS LYS LEU LYS LEU GLU ILE ILE ASP SEQRES 23 B 335 SER THR ASP ILE LEU MET ASP VAL LEU LEU LEU GLY LYS SEQRES 24 B 335 GLU ARG TYR LEU ASN GLU LEU GLU ASP LEU ALA HIS GLN SEQRES 25 B 335 ALA GLY PHE VAL VAL LYS ASP ILE LYS GLU ILE ASN GLU SEQRES 26 B 335 LYS TYR SER ILE ILE GLU LEU GLY VAL LYS HET SAH A 401 26 HET NA A 402 1 HET SAH B 401 26 HET GOL B 402 6 HET NA B 403 1 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 NA 2(NA 1+) FORMUL 6 GOL C3 H8 O3 FORMUL 8 HOH *252(H2 O) HELIX 1 AA1 GLY A -1 THR A 7 1 9 HELIX 2 AA2 SER A 8 MET A 21 1 14 HELIX 3 AA3 LEU A 23 ALA A 31 5 9 HELIX 4 AA4 ASN A 34 GLY A 43 1 10 HELIX 5 AA5 ASP A 45 ILE A 59 1 15 HELIX 6 AA6 GLU A 73 ASP A 80 5 8 HELIX 7 AA7 SER A 83 VAL A 93 1 11 HELIX 8 AA8 SER A 94 MET A 103 1 10 HELIX 9 AA9 MET A 103 GLU A 110 1 8 HELIX 10 AB1 THR A 115 GLY A 122 1 8 HELIX 11 AB2 PRO A 124 ASP A 130 1 7 HELIX 12 AB3 HIS A 132 TYR A 158 1 27 HELIX 13 AB4 ASP A 159 HIS A 163 5 5 HELIX 14 AB5 GLY A 174 ILE A 184 1 11 HELIX 15 AB6 VAL A 227 TRP A 231 5 5 HELIX 16 AB7 SER A 232 MET A 247 1 16 HELIX 17 AB8 LEU A 264 LEU A 279 1 16 HELIX 18 AB9 TYR A 284 ALA A 295 1 12 HELIX 19 AC1 GLY B -1 THR B 7 1 9 HELIX 20 AC2 SER B 8 MET B 21 1 14 HELIX 21 AC3 LEU B 23 ALA B 31 5 9 HELIX 22 AC4 ASN B 34 GLY B 43 1 10 HELIX 23 AC5 ASP B 45 ILE B 59 1 15 HELIX 24 AC6 GLU B 73 ASP B 80 5 8 HELIX 25 AC7 SER B 83 VAL B 93 1 11 HELIX 26 AC8 SER B 94 MET B 103 1 10 HELIX 27 AC9 MET B 103 LEU B 108 1 6 HELIX 28 AD1 THR B 115 GLY B 122 1 8 HELIX 29 AD2 PRO B 124 HIS B 131 1 8 HELIX 30 AD3 HIS B 132 TYR B 158 1 27 HELIX 31 AD4 ASP B 159 HIS B 163 5 5 HELIX 32 AD5 GLY B 174 ILE B 184 1 11 HELIX 33 AD6 VAL B 227 TRP B 231 5 5 HELIX 34 AD7 SER B 232 MET B 247 1 16 HELIX 35 AD8 LEU B 264 LEU B 279 1 16 HELIX 36 AD9 TYR B 284 ALA B 295 1 12 SHEET 1 AA1 2 LEU A 62 CYS A 65 0 SHEET 2 AA1 2 GLY A 68 LEU A 71 -1 O ALA A 70 N VAL A 63 SHEET 1 AA2 7 ILE A 204 ASN A 208 0 SHEET 2 AA2 7 HIS A 188 ASP A 193 1 N VAL A 191 O ILE A 207 SHEET 3 AA2 7 ARG A 165 VAL A 169 1 N ILE A 166 O HIS A 188 SHEET 4 AA2 7 LEU A 221 LYS A 225 1 O ILE A 223 N LEU A 167 SHEET 5 AA2 7 THR A 252 THR A 258 1 O LEU A 254 N LEU A 224 SHEET 6 AA2 7 TYR A 309 GLY A 315 -1 O LEU A 314 N ILE A 253 SHEET 7 AA2 7 VAL A 298 GLU A 304 -1 N LYS A 300 O GLU A 313 SHEET 1 AA3 2 LEU B 62 CYS B 65 0 SHEET 2 AA3 2 GLY B 68 LEU B 71 -1 O ALA B 70 N VAL B 63 SHEET 1 AA4 7 ILE B 204 ASN B 208 0 SHEET 2 AA4 7 HIS B 188 ASP B 193 1 N VAL B 191 O ILE B 207 SHEET 3 AA4 7 ARG B 165 VAL B 169 1 N ILE B 166 O HIS B 188 SHEET 4 AA4 7 LEU B 221 LYS B 225 1 O LEU B 221 N LEU B 167 SHEET 5 AA4 7 THR B 252 THR B 258 1 O THR B 252 N TYR B 222 SHEET 6 AA4 7 TYR B 309 GLY B 315 -1 O ILE B 312 N LEU B 255 SHEET 7 AA4 7 VAL B 298 GLU B 304 -1 N VAL B 298 O GLY B 315 SSBOND 1 CYS A 32 CYS A 65 1555 1555 2.04 SSBOND 2 CYS B 32 CYS B 65 1555 1555 2.05 LINK OD1 ASP A 275 NA NA A 402 1555 1555 2.39 LINK O LEU A 279 NA NA A 402 1555 1555 3.12 LINK O GLY A 280 NA NA A 402 1555 1555 2.80 LINK O PHE B 18 NA NA B 403 1555 1555 2.11 LINK OG SER B 24 NA NA B 403 1555 1555 2.48 CRYST1 172.280 57.940 97.180 90.00 121.78 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005805 0.000000 0.003597 0.00000 SCALE2 0.000000 0.017259 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012105 0.00000