HEADER CYTOSOLIC PROTEIN 25-NOV-22 8BNT TITLE THE DH DOMAIN OF ARHGEF2 BOUND TO RHOA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSFORMING PROTEIN RHOA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RHO CDNA CLONE 12,H12; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: GUANINE NUCLEOTIDE EXCHANGE FACTOR H1,GEF-H1,MICROTUBULE- COMPND 11 REGULATED RHO-GEF,PROLIFERATING CELL NUCLEOLAR ANTIGEN P40; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RHOA, ARH12, ARHA, RHO12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ARHGEF2, KIAA0651, LFP40; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS GTP, GDP, GUANINE, CYTOSKELETON, CYTOSOLIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.J.BRADSHAW,V.L.KATIS,H.GROSJEAN,C.BOUNTRA,F.VON DELFT,P.E.BRENNAN REVDAT 3 07-FEB-24 8BNT 1 REMARK REVDAT 2 03-MAY-23 8BNT 1 COMPND SOURCE DBREF SEQADV REVDAT 1 07-DEC-22 8BNT 0 JRNL AUTH W.J.BRADSHAW,V.L.KATIS,H.GROSJEAN,C.BOUNTRA,F.VON DELFT, JRNL AUTH 2 P.E.BRENNAN JRNL TITL THE DH DOMAIN OF ARHGEF2 BOUND TO RHOA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 100884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.130 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.982 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7160 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 151 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 451 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30700 REMARK 3 B22 (A**2) : 0.30700 REMARK 3 B33 (A**2) : -0.61400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.048 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.051 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.471 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3811 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3578 ; 0.003 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5163 ; 1.640 ; 1.652 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8412 ; 0.609 ; 1.567 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 499 ; 5.566 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 32 ; 8.248 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 742 ;13.245 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 581 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4383 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 737 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 652 ; 0.256 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 99 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1735 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 286 ; 0.244 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1804 ; 2.909 ; 1.741 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1805 ; 2.910 ; 1.742 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2270 ; 3.547 ; 2.614 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2271 ; 3.546 ; 2.616 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2007 ; 5.737 ; 2.365 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1978 ; 5.602 ; 2.339 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2858 ; 6.091 ; 3.289 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2859 ; 6.091 ; 3.289 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7389 ; 5.150 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8BNT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292126656. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9212 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101036 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 71.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 45.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 22.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4D0N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.6 M SODIUM FORMATE, 100 MM TRIS, PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.26350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.71600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.71600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 147.39525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.71600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.71600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.13175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.71600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.71600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 147.39525 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.71600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.71600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 49.13175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 98.26350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C FMT B 505 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 872 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 182 REMARK 465 ARG A 183 REMARK 465 GLY A 184 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 FMT B 510 O HOH B 601 1.95 REMARK 500 O HOH B 839 O HOH B 856 2.04 REMARK 500 OE1 GLU B 354 O HOH B 603 2.04 REMARK 500 O HOH B 801 O HOH B 868 2.13 REMARK 500 O HOH B 804 O HOH B 857 2.13 REMARK 500 NH1 ARG A 168 O HOH A 301 2.15 REMARK 500 O HOH B 879 O HOH B 891 2.16 REMARK 500 OD2 ASP B 320 O HOH B 604 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 340 CD GLU B 340 OE1 0.076 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 70 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 168 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 311 NE - CZ - NH1 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG B 311 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 317 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 40 -81.37 -85.29 REMARK 500 LYS A 98 -68.96 -106.04 REMARK 500 LYS A 164 -3.13 73.72 REMARK 500 HIS B 270 56.79 -114.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 128 0.08 SIDE CHAIN REMARK 500 ARG B 292 0.12 SIDE CHAIN REMARK 500 ARG B 441 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8BNT A 1 184 UNP P61586 RHOA_HUMAN 1 184 DBREF 8BNT B 206 448 UNP Q92974 ARHG2_HUMAN 206 448 SEQADV 8BNT SER A 0 UNP P61586 EXPRESSION TAG SEQADV 8BNT SER B 204 UNP Q92974 EXPRESSION TAG SEQADV 8BNT MET B 205 UNP Q92974 EXPRESSION TAG SEQRES 1 A 185 SER MET ALA ALA ILE ARG LYS LYS LEU VAL ILE VAL GLY SEQRES 2 A 185 ASP GLY ALA CYS GLY LYS THR CYS LEU LEU ILE VAL PHE SEQRES 3 A 185 SER LYS ASP GLN PHE PRO GLU VAL TYR VAL PRO THR VAL SEQRES 4 A 185 PHE GLU ASN TYR VAL ALA ASP ILE GLU VAL ASP GLY LYS SEQRES 5 A 185 GLN VAL GLU LEU ALA LEU TRP ASP THR ALA GLY GLN GLU SEQRES 6 A 185 ASP TYR ASP ARG LEU ARG PRO LEU SER TYR PRO ASP THR SEQRES 7 A 185 ASP VAL ILE LEU MET CYS PHE SER ILE ASP SER PRO ASP SEQRES 8 A 185 SER LEU GLU ASN ILE PRO GLU LYS TRP THR PRO GLU VAL SEQRES 9 A 185 LYS HIS PHE CYS PRO ASN VAL PRO ILE ILE LEU VAL GLY SEQRES 10 A 185 ASN LYS LYS ASP LEU ARG ASN ASP GLU HIS THR ARG ARG SEQRES 11 A 185 GLU LEU ALA LYS MET LYS GLN GLU PRO VAL LYS PRO GLU SEQRES 12 A 185 GLU GLY ARG ASP MET ALA ASN ARG ILE GLY ALA PHE GLY SEQRES 13 A 185 TYR MET GLU CYS SER ALA LYS THR LYS ASP GLY VAL ARG SEQRES 14 A 185 GLU VAL PHE GLU MET ALA THR ARG ALA ALA LEU GLN ALA SEQRES 15 A 185 ARG ARG GLY SEQRES 1 B 245 SER MET GLU MET ASP GLU LYS ASP PHE ALA ALA ASP SER SEQRES 2 B 245 TRP SER LEU ALA VAL ASP SER SER PHE LEU GLN GLN HIS SEQRES 3 B 245 LYS LYS GLU VAL MET LYS GLN GLN ASP VAL ILE TYR GLU SEQRES 4 B 245 LEU ILE GLN THR GLU LEU HIS HIS VAL ARG THR LEU LYS SEQRES 5 B 245 ILE MET THR ARG LEU PHE ARG THR GLY MET LEU GLU GLU SEQRES 6 B 245 LEU HIS LEU GLU PRO GLY VAL VAL GLN GLY LEU PHE PRO SEQRES 7 B 245 CYS VAL ASP GLU LEU SER ASP ILE HIS THR ARG PHE LEU SEQRES 8 B 245 SER GLN LEU LEU GLU ARG ARG ARG GLN ALA LEU CYS PRO SEQRES 9 B 245 GLY SER THR ARG ASN PHE VAL ILE HIS ARG LEU GLY ASP SEQRES 10 B 245 LEU LEU ILE SER GLN PHE SER GLY PRO SER ALA GLU GLN SEQRES 11 B 245 MET CYS LYS THR TYR SER GLU PHE CYS SER ARG HIS SER SEQRES 12 B 245 LYS ALA LEU LYS LEU TYR LYS GLU LEU TYR ALA ARG ASP SEQRES 13 B 245 LYS ARG PHE GLN GLN PHE ILE ARG LYS VAL THR ARG PRO SEQRES 14 B 245 ALA VAL LEU LYS ARG HIS GLY VAL GLN GLU CYS ILE LEU SEQRES 15 B 245 LEU VAL THR GLN ARG ILE THR LYS TYR PRO LEU LEU ILE SEQRES 16 B 245 SER ARG ILE LEU GLN HIS SER HIS GLY ILE GLU GLU GLU SEQRES 17 B 245 ARG GLN ASP LEU THR THR ALA LEU GLY LEU VAL LYS GLU SEQRES 18 B 245 LEU LEU SER ASN VAL ASP GLU GLY ILE TYR GLN LEU GLU SEQRES 19 B 245 LYS GLY ALA ARG LEU GLN GLU ILE TYR ASN ARG HET DMS A 201 4 HET FMT A 202 3 HET FMT A 203 3 HET FMT A 204 3 HET FMT A 205 3 HET FMT A 206 3 HET FMT A 207 3 HET DMS B 501 4 HET DMS B 502 4 HET DMS B 503 4 HET DMS B 504 4 HET FMT B 505 3 HET FMT B 506 3 HET FMT B 507 3 HET FMT B 508 3 HET FMT B 509 3 HET FMT B 510 3 HET FMT B 511 3 HET FMT B 512 3 HET FMT B 513 3 HETNAM DMS DIMETHYL SULFOXIDE HETNAM FMT FORMIC ACID FORMUL 3 DMS 5(C2 H6 O S) FORMUL 4 FMT 15(C H2 O2) FORMUL 23 HOH *451(H2 O) HELIX 1 AA1 ASP A 13 CYS A 16 5 4 HELIX 2 AA2 GLY A 17 ASP A 28 1 12 HELIX 3 AA3 LEU A 69 TYR A 74 5 6 HELIX 4 AA4 SER A 88 ASN A 94 1 7 HELIX 5 AA5 LYS A 98 CYS A 107 1 10 HELIX 6 AA6 LYS A 118 ARG A 122 5 5 HELIX 7 AA7 ASP A 124 LYS A 133 1 10 HELIX 8 AA8 LYS A 140 ILE A 151 1 12 HELIX 9 AA9 GLY A 166 GLN A 180 1 15 HELIX 10 AB1 MET B 205 PHE B 212 1 8 HELIX 11 AB2 SER B 216 VAL B 221 1 6 HELIX 12 AB3 ASP B 222 GLN B 227 1 6 HELIX 13 AB4 LYS B 230 LEU B 260 1 31 HELIX 14 AB5 PHE B 261 LEU B 269 1 9 HELIX 15 AB6 GLY B 274 PHE B 280 1 7 HELIX 16 AB7 CYS B 282 LEU B 305 1 24 HELIX 17 AB8 ARG B 317 PHE B 326 1 10 HELIX 18 AB9 SER B 327 ARG B 344 1 18 HELIX 19 AC1 ARG B 344 ASP B 359 1 16 HELIX 20 AC2 ASP B 359 ARG B 371 1 13 HELIX 21 AC3 PRO B 372 LYS B 376 5 5 HELIX 22 AC4 GLY B 379 HIS B 404 1 26 HELIX 23 AC5 ILE B 408 GLY B 432 1 25 HELIX 24 AC6 ARG B 441 ASN B 447 1 7 SHEET 1 AA1 6 TYR A 42 VAL A 48 0 SHEET 2 AA1 6 LYS A 51 ASP A 59 -1 O LEU A 57 N TYR A 42 SHEET 3 AA1 6 ILE A 4 VAL A 11 1 N LEU A 8 O ALA A 56 SHEET 4 AA1 6 VAL A 79 SER A 85 1 O CYS A 83 N VAL A 11 SHEET 5 AA1 6 ILE A 112 ASN A 117 1 O ASN A 117 N PHE A 84 SHEET 6 AA1 6 GLY A 155 GLU A 158 1 O MET A 157 N GLY A 116 CRYST1 71.432 71.432 196.527 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013999 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013999 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005088 0.00000