HEADER TRANSFERASE 15-NOV-22 8BOH TITLE CRYSTAL STRUCTURE OF EPHRIN A2 (EPHA2) RECEPTOR PROTEIN KINASE WITH TITLE 2 COMPOUND 8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPHRIN TYPE-A RECEPTOR 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EPITHELIAL CELL KINASE,TYROSINE-PROTEIN KINASE RECEPTOR ECK; COMPND 5 EC: 2.7.10.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EPHA2, ECK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INHIBITOR, COMPLEX, PROTEIN TYROSINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.LINHARD,K.WITT,S.GANDE,J.WOLLENHAUPT,F.LENNARTZ,M.S.WEISS, AUTHOR 2 H.SCHWALBE REVDAT 6 07-FEB-24 8BOH 1 REMARK REVDAT 5 03-MAY-23 8BOH 1 JRNL REVDAT 4 05-APR-23 8BOH 1 JRNL REVDAT 3 22-MAR-23 8BOH 1 JRNL REVDAT 2 15-MAR-23 8BOH 1 JRNL REVDAT 1 08-MAR-23 8BOH 0 JRNL AUTH A.TROSTER,M.DIPRIMA,N.JORES,D.KUDLINZKI,S.SREERAMULU, JRNL AUTH 2 S.L.GANDE,V.LINHARD,D.LUDIG,A.SCHUG,K.SAXENA,M.REINECKE, JRNL AUTH 3 S.HEINZLMEIR,M.S.LEISEGANG,J.WOLLENHAUPT,F.LENNARTZ, JRNL AUTH 4 M.S.WEISS,B.KUSTER,G.TOSATO,H.SCHWALBE JRNL TITL OPTIMIZATION OF THE LEAD COMPOUND NVP-BHG712 AS A COLORECTAL JRNL TITL 2 CANCER INHIBITOR. JRNL REF CHEMISTRY V. 29 03967 2023 JRNL REFN ISSN 0947-6539 JRNL PMID 36799129 JRNL DOI 10.1002/CHEM.202203967 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 49012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.280 REMARK 3 FREE R VALUE TEST SET COUNT : 2099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3000 - 3.4900 0.99 3204 143 0.1379 0.1457 REMARK 3 2 3.4900 - 2.7700 0.99 3151 141 0.1451 0.1511 REMARK 3 3 2.7700 - 2.4200 1.00 3163 142 0.1388 0.1620 REMARK 3 4 2.4200 - 2.2000 1.00 3163 141 0.1392 0.1541 REMARK 3 5 2.2000 - 2.0400 0.98 3070 138 0.1339 0.1563 REMARK 3 6 2.0400 - 1.9200 1.00 3149 140 0.1437 0.1737 REMARK 3 7 1.9200 - 1.8300 1.00 3172 142 0.1469 0.1656 REMARK 3 8 1.8300 - 1.7500 1.00 3162 142 0.1649 0.1998 REMARK 3 9 1.7500 - 1.6800 0.98 3115 139 0.1918 0.2133 REMARK 3 10 1.6800 - 1.6200 0.99 3093 139 0.2009 0.2316 REMARK 3 11 1.6200 - 1.5700 0.99 3157 141 0.2179 0.2291 REMARK 3 12 1.5700 - 1.5300 1.00 3142 141 0.2358 0.2653 REMARK 3 13 1.5300 - 1.4900 1.00 3092 138 0.2498 0.2721 REMARK 3 14 1.4900 - 1.4500 1.00 3201 143 0.2752 0.2843 REMARK 3 15 1.4500 - 1.4200 0.92 2879 129 0.3285 0.3253 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.161 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.632 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.17 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2406 REMARK 3 ANGLE : 1.137 3275 REMARK 3 CHIRALITY : 0.088 346 REMARK 3 PLANARITY : 0.016 471 REMARK 3 DIHEDRAL : 12.831 949 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 604 THROUGH 618 ) REMARK 3 ORIGIN FOR THE GROUP (A): -87.2461 -31.0363 79.8383 REMARK 3 T TENSOR REMARK 3 T11: 0.2819 T22: 0.1996 REMARK 3 T33: 0.3572 T12: -0.0164 REMARK 3 T13: -0.0327 T23: -0.0662 REMARK 3 L TENSOR REMARK 3 L11: 5.3361 L22: 2.4589 REMARK 3 L33: 2.5594 L12: 1.4724 REMARK 3 L13: 1.0888 L23: -0.9250 REMARK 3 S TENSOR REMARK 3 S11: 0.0349 S12: -0.1328 S13: 0.4453 REMARK 3 S21: -0.3215 S22: 0.2926 S23: -0.1065 REMARK 3 S31: -0.0434 S32: -0.0256 S33: -0.3291 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 619 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): -80.1930 -28.0391 83.7326 REMARK 3 T TENSOR REMARK 3 T11: 0.2836 T22: 0.1694 REMARK 3 T33: 0.3586 T12: 0.0021 REMARK 3 T13: 0.0235 T23: -0.0761 REMARK 3 L TENSOR REMARK 3 L11: 5.8653 L22: 4.2616 REMARK 3 L33: 4.4794 L12: 0.5172 REMARK 3 L13: 1.0505 L23: -2.9020 REMARK 3 S TENSOR REMARK 3 S11: 0.1032 S12: -0.1269 S13: -0.2959 REMARK 3 S21: 0.0934 S22: 0.1118 S23: -0.5118 REMARK 3 S31: 0.2815 S32: 0.5067 S33: -0.2209 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 641 THROUGH 669 ) REMARK 3 ORIGIN FOR THE GROUP (A): -88.7860 -27.8074 91.5278 REMARK 3 T TENSOR REMARK 3 T11: 0.1959 T22: 0.1080 REMARK 3 T33: 0.2465 T12: 0.0212 REMARK 3 T13: -0.0194 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.9233 L22: 2.8328 REMARK 3 L33: 5.1066 L12: 0.2499 REMARK 3 L13: 0.0817 L23: -2.7425 REMARK 3 S TENSOR REMARK 3 S11: -0.0556 S12: -0.1354 S13: 0.0852 REMARK 3 S21: 0.0959 S22: 0.2063 S23: 0.2226 REMARK 3 S31: -0.0184 S32: -0.0241 S33: -0.1173 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 670 THROUGH 687 ) REMARK 3 ORIGIN FOR THE GROUP (A): -91.4299 -22.6335 83.1393 REMARK 3 T TENSOR REMARK 3 T11: 0.1835 T22: 0.1606 REMARK 3 T33: 0.1741 T12: -0.0113 REMARK 3 T13: -0.0240 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 0.1629 L22: 8.5045 REMARK 3 L33: 0.5599 L12: -0.8065 REMARK 3 L13: -0.0844 L23: -0.6559 REMARK 3 S TENSOR REMARK 3 S11: 0.0804 S12: 0.0351 S13: -0.1644 REMARK 3 S21: -0.1596 S22: -0.0590 S23: 0.3854 REMARK 3 S31: 0.1977 S32: -0.0490 S33: -0.0156 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 688 THROUGH 712 ) REMARK 3 ORIGIN FOR THE GROUP (A): -76.1723 -12.1148 82.0793 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.1816 REMARK 3 T33: 0.1526 T12: 0.0043 REMARK 3 T13: 0.0044 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 2.1809 L22: 4.4767 REMARK 3 L33: 0.7442 L12: 2.6541 REMARK 3 L13: -0.8040 L23: -1.2010 REMARK 3 S TENSOR REMARK 3 S11: -0.1164 S12: 0.0489 S13: -0.1388 REMARK 3 S21: -0.3067 S22: 0.0718 S23: -0.0752 REMARK 3 S31: 0.1604 S32: 0.0834 S33: 0.0340 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 713 THROUGH 755 ) REMARK 3 ORIGIN FOR THE GROUP (A): -85.5761 -7.0522 86.7715 REMARK 3 T TENSOR REMARK 3 T11: 0.1142 T22: 0.1379 REMARK 3 T33: 0.1093 T12: -0.0073 REMARK 3 T13: 0.0054 T23: -0.0056 REMARK 3 L TENSOR REMARK 3 L11: 1.6599 L22: 1.1977 REMARK 3 L33: 1.0290 L12: 0.0126 REMARK 3 L13: -0.4890 L23: 0.0784 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.0567 S13: -0.0437 REMARK 3 S21: -0.0458 S22: 0.0184 S23: 0.0201 REMARK 3 S31: 0.0113 S32: -0.0105 S33: -0.0005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 756 THROUGH 795 ) REMARK 3 ORIGIN FOR THE GROUP (A): -83.3098 -9.2908 103.3394 REMARK 3 T TENSOR REMARK 3 T11: 0.1758 T22: 0.1999 REMARK 3 T33: 0.1373 T12: 0.0010 REMARK 3 T13: -0.0008 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 0.2437 L22: 0.5960 REMARK 3 L33: 2.0934 L12: 0.2670 REMARK 3 L13: 0.3442 L23: 1.0157 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: -0.0966 S13: -0.0688 REMARK 3 S21: 0.0867 S22: 0.0111 S23: -0.0532 REMARK 3 S31: 0.1817 S32: 0.0705 S33: -0.0058 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 796 THROUGH 843 ) REMARK 3 ORIGIN FOR THE GROUP (A): -75.3526 0.6504 98.2979 REMARK 3 T TENSOR REMARK 3 T11: 0.1168 T22: 0.1583 REMARK 3 T33: 0.1271 T12: 0.0066 REMARK 3 T13: -0.0002 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.2458 L22: 1.2409 REMARK 3 L33: 0.9116 L12: -0.1167 REMARK 3 L13: 0.1074 L23: -0.1352 REMARK 3 S TENSOR REMARK 3 S11: -0.0443 S12: -0.0764 S13: 0.0313 REMARK 3 S21: 0.0573 S22: 0.0215 S23: -0.1164 REMARK 3 S31: -0.0208 S32: 0.0901 S33: 0.0173 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 844 THROUGH 881 ) REMARK 3 ORIGIN FOR THE GROUP (A): -87.2990 6.5897 93.4606 REMARK 3 T TENSOR REMARK 3 T11: 0.1354 T22: 0.1223 REMARK 3 T33: 0.1450 T12: 0.0202 REMARK 3 T13: 0.0037 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.5139 L22: 1.7076 REMARK 3 L33: 3.2631 L12: 0.1847 REMARK 3 L13: 0.5310 L23: -1.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.0358 S12: -0.0607 S13: 0.0931 REMARK 3 S21: 0.0309 S22: 0.0105 S23: 0.0218 REMARK 3 S31: -0.1536 S32: -0.1353 S33: 0.0062 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 882 THROUGH 896 ) REMARK 3 ORIGIN FOR THE GROUP (A): -64.0932 14.4178 90.9061 REMARK 3 T TENSOR REMARK 3 T11: 0.1984 T22: 0.2250 REMARK 3 T33: 0.3545 T12: -0.0049 REMARK 3 T13: -0.0233 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 2.6136 L22: 1.8612 REMARK 3 L33: 1.9547 L12: 0.7821 REMARK 3 L13: 0.5306 L23: 0.1770 REMARK 3 S TENSOR REMARK 3 S11: -0.0628 S12: -0.4288 S13: -0.1208 REMARK 3 S21: 0.0956 S22: 0.0480 S23: -0.5605 REMARK 3 S31: 0.0338 S32: 0.2565 S33: -0.0007 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BOH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292126727. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49017 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 38.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.57 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6Q7D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37,5 % PRECIPITANT MIX 4 (25% (V/V) REMARK 280 HEXYLENE GLYCOL, 25% (W/V) POLY(ETHYLENE GLYCOL) 1000, 25% (W/V) REMARK 280 POLY(ETHYLENE GLYCOL) 3350), 0.1M TRIS-HCL PH 6.5, 0.1 M AMINO REMARK 280 ACIDS MIX (0.2 M DL-ALANINE, 0.2M DL-GLUTAMIC ACID MONOHYDRATE, REMARK 280 0.2M DL-LYSINE MONOHYDROCHLORIDE, 0.2M DL-SERINE, 0.2M GLYCINE), REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.29000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 595 REMARK 465 ASP A 596 REMARK 465 PRO A 597 REMARK 465 ASN A 598 REMARK 465 GLN A 599 REMARK 465 ALA A 600 REMARK 465 VAL A 601 REMARK 465 LEU A 602 REMARK 465 LYS A 603 REMARK 465 THR A 634 REMARK 465 SER A 635 REMARK 465 SER A 636 REMARK 465 GLY A 637 REMARK 465 LYS A 638 REMARK 465 LYS A 639 REMARK 465 SER A 761 REMARK 465 ARG A 762 REMARK 465 VAL A 763 REMARK 465 LEU A 764 REMARK 465 GLU A 765 REMARK 465 ASP A 766 REMARK 465 ASP A 767 REMARK 465 PRO A 768 REMARK 465 GLU A 769 REMARK 465 ALA A 770 REMARK 465 THR A 771 REMARK 465 TYR A 772 REMARK 465 THR A 773 REMARK 465 THR A 774 REMARK 465 SER A 775 REMARK 465 GLY A 776 REMARK 465 GLY A 777 REMARK 465 LYS A 778 REMARK 465 SER A 897 REMARK 465 THR A 898 REMARK 465 SER A 899 REMARK 465 GLY A 900 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 856 O HOH A 1103 1.56 REMARK 500 OD1 ASP A 888 O HOH A 1101 1.95 REMARK 500 OE1 GLN A 856 O HOH A 1102 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 624 65.34 -154.99 REMARK 500 ARG A 738 -16.80 79.04 REMARK 500 TYR A 791 20.20 -148.28 REMARK 500 TRP A 819 -125.05 46.87 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BOH A 596 900 UNP P29317 EPHA2_HUMAN 596 900 SEQADV 8BOH GLY A 595 UNP P29317 EXPRESSION TAG SEQRES 1 A 306 GLY ASP PRO ASN GLN ALA VAL LEU LYS PHE THR THR GLU SEQRES 2 A 306 ILE HIS PRO SER CYS VAL THR ARG GLN LYS VAL ILE GLY SEQRES 3 A 306 ALA GLY GLU PHE GLY GLU VAL TYR LYS GLY MET LEU LYS SEQRES 4 A 306 THR SER SER GLY LYS LYS GLU VAL PRO VAL ALA ILE LYS SEQRES 5 A 306 THR LEU LYS ALA GLY TYR THR GLU LYS GLN ARG VAL ASP SEQRES 6 A 306 PHE LEU GLY GLU ALA GLY ILE MET GLY GLN PHE SER HIS SEQRES 7 A 306 HIS ASN ILE ILE ARG LEU GLU GLY VAL ILE SER LYS TYR SEQRES 8 A 306 LYS PRO MET MET ILE ILE THR GLU TYR MET GLU ASN GLY SEQRES 9 A 306 ALA LEU ASP LYS PHE LEU ARG GLU LYS ASP GLY GLU PHE SEQRES 10 A 306 SER VAL LEU GLN LEU VAL GLY MET LEU ARG GLY ILE ALA SEQRES 11 A 306 ALA GLY MET LYS TYR LEU ALA ASN MET ASN TYR VAL HIS SEQRES 12 A 306 ARG ASP LEU ALA ALA ARG ASN ILE LEU VAL ASN SER ASN SEQRES 13 A 306 LEU VAL CYS LYS VAL SER ASP PHE GLY LEU SER ARG VAL SEQRES 14 A 306 LEU GLU ASP ASP PRO GLU ALA THR TYR THR THR SER GLY SEQRES 15 A 306 GLY LYS ILE PRO ILE ARG TRP THR ALA PRO GLU ALA ILE SEQRES 16 A 306 SER TYR ARG LYS PHE THR SER ALA SER ASP VAL TRP SER SEQRES 17 A 306 PHE GLY ILE VAL MET TRP GLU VAL MET THR TYR GLY GLU SEQRES 18 A 306 ARG PRO TYR TRP GLU LEU SER ASN HIS GLU VAL MET LYS SEQRES 19 A 306 ALA ILE ASN ASP GLY PHE ARG LEU PRO THR PRO MET ASP SEQRES 20 A 306 CYS PRO SER ALA ILE TYR GLN LEU MET MET GLN CYS TRP SEQRES 21 A 306 GLN GLN GLU ARG ALA ARG ARG PRO LYS PHE ALA ASP ILE SEQRES 22 A 306 VAL SER ILE LEU ASP LYS LEU ILE ARG ALA PRO ASP SER SEQRES 23 A 306 LEU LYS THR LEU ALA ASP PHE ASP PRO ARG VAL SER ILE SEQRES 24 A 306 ARG LEU PRO SER THR SER GLY HET R0T A1001 67 HETNAM R0T 4-METHYL-~{N}-[3-(4-METHYLIMIDAZOL-1-YL)-5- HETNAM 2 R0T (TRIFLUOROMETHYL)PHENYL]-3-[(1-METHYL-6-PYRIDIN-3-YL- HETNAM 3 R0T PYRAZOLO[3,4-D]PYRIMIDIN-4-YL)AMINO]BENZAMIDE FORMUL 2 R0T C30 H24 F3 N9 O FORMUL 3 HOH *184(H2 O) HELIX 1 AA1 HIS A 609 SER A 611 5 3 HELIX 2 AA2 THR A 653 PHE A 670 1 18 HELIX 3 AA3 ALA A 699 LYS A 707 1 9 HELIX 4 AA4 SER A 712 MET A 733 1 22 HELIX 5 AA5 ALA A 741 ARG A 743 5 3 HELIX 6 AA6 PRO A 780 THR A 784 5 5 HELIX 7 AA7 ALA A 785 ARG A 792 1 8 HELIX 8 AA8 THR A 795 THR A 812 1 18 HELIX 9 AA9 SER A 822 ASP A 832 1 11 HELIX 10 AB1 PRO A 843 TRP A 854 1 12 HELIX 11 AB2 GLU A 857 ARG A 861 5 5 HELIX 12 AB3 LYS A 863 ALA A 877 1 15 HELIX 13 AB4 PRO A 878 THR A 883 5 6 SHEET 1 AA1 5 VAL A 613 GLY A 622 0 SHEET 2 AA1 5 GLY A 625 LEU A 632 -1 O GLY A 625 N GLY A 622 SHEET 3 AA1 5 VAL A 641 LEU A 648 -1 O VAL A 641 N LEU A 632 SHEET 4 AA1 5 MET A 688 GLU A 693 -1 O ILE A 690 N LYS A 646 SHEET 5 AA1 5 LEU A 678 ILE A 682 -1 N GLY A 680 O ILE A 691 SHEET 1 AA2 2 ILE A 745 VAL A 747 0 SHEET 2 AA2 2 CYS A 753 VAL A 755 -1 O LYS A 754 N LEU A 746 CISPEP 1 LYS A 686 PRO A 687 0 -0.84 CRYST1 32.700 106.580 40.390 90.00 108.52 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030581 0.000000 0.010244 0.00000 SCALE2 0.000000 0.009383 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026111 0.00000