data_8BV6 # _entry.id 8BV6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.366 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8BV6 pdb_00008bv6 10.2210/pdb8bv6/pdb WWPDB D_1292127159 ? ? BMRB 34774 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same DNA in different pH conditions' 8BQY unspecified BMRB 'An i-motif domain able to undergo pH-dependent conformational transitions (neutral structure)' 34774 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8BV6 _pdbx_database_status.recvd_initial_deposition_date 2022-12-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Serrano-Chacon, I.' 1 ? 'Mir, B.' 2 ? 'Cupellini, L.' 3 ? 'Colizzi, F.' 4 ? 'Orozco, M.' 5 ? 'Escaja, N.' 6 ? 'Gonzalez, C.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 145 _citation.language ? _citation.page_first 3696 _citation.page_last 3705 _citation.title 'pH-Dependent Capping Interactions Induce Large-Scale Structural Transitions in i-Motifs.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.2c13043 _citation.pdbx_database_id_PubMed 36745195 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serrano-Chacon, I.' 1 ? primary 'Mir, B.' 2 ? primary 'Cupellini, L.' 3 0000-0003-0848-2908 primary 'Colizzi, F.' 4 0000-0001-5601-1452 primary 'Orozco, M.' 5 0000-0002-8608-3278 primary 'Escaja, N.' 6 ? primary 'Gonzalez, C.' 7 0000-0001-8796-1282 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3') ; _entity.formula_weight 6629.263 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(DC)(DNR)(DG)(DT)(DT)(DC)(DNR)(DG)(DT)(DT)(DT)(DT)(DT)(DC)(DC)(DG)(DT)(DT)(DC) (DC)(DG)(DT) ; _entity_poly.pdbx_seq_one_letter_code_can CCGTTCCGTTTTTCCGTTCCGT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DNR n 1 3 DG n 1 4 DT n 1 5 DT n 1 6 DC n 1 7 DNR n 1 8 DG n 1 9 DT n 1 10 DT n 1 11 DT n 1 12 DT n 1 13 DT n 1 14 DC n 1 15 DC n 1 16 DG n 1 17 DT n 1 18 DT n 1 19 DC n 1 20 DC n 1 21 DG n 1 22 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8BV6 _struct_ref.pdbx_db_accession 8BV6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8BV6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8BV6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DNR 'DNA linking' n ;2'-DEOXY-N3-PROTONATED CYTIDINE-5'-MONOPHOSPHATE ; ? 'C9 H15 N3 O7 P 1' 308.205 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 2 2 '2D 1H-1H TOCSY' 1 isotropic 4 1 1 '2D 1H-1H NOESY' 1 isotropic 5 2 1 '2D 1H-1H NOESY' 1 isotropic 6 2 2 '2D 1H-1H NOESY' 1 isotropic 7 2 2 '2D 1H-1H COSY' 1 isotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 278 atm 1 7 10 ? ? mM T278 ? pH ? ? K 2 278 atm 1 7 10 ? ? mM T298 ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;500 uM DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3'), 10 mM sodium phosphate, 0.5 v/v DSS, 90% H2O/10% D2O ; '90% H2O/10% D2O' NN4 solution ? 2 ;500 uM DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3'), 10 mM sodium phosphate, 0.5 v/v DSS, 100% D2O ; '100% D2O' NN4_D2O solution ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 8BV6 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # _pdbx_nmr_ensemble.entry_id 8BV6 _pdbx_nmr_ensemble.conformers_calculated_total_number 15 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8BV6 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 processing TopSpin ? 'Bruker Biospin' 3 'chemical shift assignment' Sparky ? Goddard 4 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 5 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 6 'data analysis' 3DNA ? 'Lu and Olson' 7 'data analysis' MOLMOL ? 'Koradi, Billeter and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8BV6 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8BV6 _struct.title 'An i-motif domain able to undergo pH-dependent conformational transitions (neutral structure)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8BV6 _struct_keywords.text 'DNA structure, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 1 "O3'" ? ? ? 1_555 A DNR 2 P ? ? A DC 1 A DNR 2 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale2 covale both ? A DNR 2 "O3'" ? ? ? 1_555 A DG 3 P ? ? A DNR 2 A DG 3 1_555 ? ? ? ? ? ? ? 1.615 ? ? covale3 covale both ? A DC 6 "O3'" ? ? ? 1_555 A DNR 7 P ? ? A DC 6 A DNR 7 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale4 covale both ? A DNR 7 "O3'" ? ? ? 1_555 A DG 8 P ? ? A DNR 7 A DG 8 1_555 ? ? ? ? ? ? ? 1.609 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 16 N1 ? ? A DC 1 A DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 16 O6 ? ? A DC 1 A DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 16 N2 ? ? A DC 1 A DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DNR 2 N4 ? ? ? 1_555 A DC 14 O2 ? ? A DNR 2 A DC 14 1_555 ? ? ? ? ? ? 'DNR-DC MISPAIR' ? ? ? hydrog5 hydrog ? ? A DNR 2 N4 ? ? ? 1_555 A DC 20 O2 ? ? A DNR 2 A DC 20 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog6 hydrog ? ? A DNR 2 O2 ? ? ? 1_555 A DC 20 N4 ? ? A DNR 2 A DC 20 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 14 N3 ? ? A DG 3 A DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 14 O2 ? ? A DG 3 A DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 14 N4 ? ? A DG 3 A DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 21 N3 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 N3 ? ? ? 1_555 A DG 21 N2 ? ? A DG 3 A DG 21 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog12 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 21 N1 ? ? A DC 6 A DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 21 O6 ? ? A DC 6 A DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 21 N2 ? ? A DC 6 A DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DNR 7 N4 ? ? ? 1_555 A DC 15 O2 ? ? A DNR 7 A DC 15 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog16 hydrog ? ? A DNR 7 O2 ? ? ? 1_555 A DC 15 N4 ? ? A DNR 7 A DC 15 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog17 hydrog ? ? A DNR 7 N4 ? ? ? 1_555 A DC 19 O2 ? ? A DNR 7 A DC 19 1_555 ? ? ? ? ? ? 'DNR-DC MISPAIR' ? ? ? hydrog18 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 16 N3 ? ? A DG 8 A DG 16 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog19 hydrog ? ? A DG 8 N3 ? ? ? 1_555 A DG 16 N2 ? ? A DG 8 A DG 16 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog20 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DC 19 N3 ? ? A DG 8 A DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DC 19 O2 ? ? A DG 8 A DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DC 19 N4 ? ? A DG 8 A DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _atom_sites.entry_id 8BV6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DNR 2 2 2 DNR DNR A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DNR 7 7 7 DNR DNR A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DT 11 11 11 DT DT A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DT 13 13 13 DT DT A . n A 1 14 DC 14 14 14 DC DC A . n A 1 15 DC 15 15 15 DC DC A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DT 17 17 17 DT DT A . n A 1 18 DT 18 18 18 DT DT A . n A 1 19 DC 19 19 19 DC DC A . n A 1 20 DC 20 20 20 DC DC A . n A 1 21 DG 21 21 21 DG DG A . n A 1 22 DT 22 22 22 DT DT A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email cgonzalez@iqfr.csic.es _pdbx_contact_author.name_first Carlos _pdbx_contact_author.name_last Gonzalez _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8796-1282 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1230 ? 1 MORE 14 ? 1 'SSA (A^2)' 3740 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-02-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_entry_details.entry_id 8BV6 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3') ; 500 ? uM 'natural abundance' 1 'sodium phosphate' 10 ? mM 'natural abundance' 1 DSS 0.5 ? v/v 'natural abundance' 2 ;DNA (5'-D(*CP*(DNR)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*CP*GP*T)-3') ; 500 ? uM 'natural abundance' 2 'sodium phosphate' 10 ? mM 'natural abundance' 2 DSS 0.5 ? v/v 'natural abundance' # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 10 _pdbx_validate_rmsd_bond.auth_atom_id_1 C5 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 11 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C7 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 11 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.535 _pdbx_validate_rmsd_bond.bond_target_value 1.496 _pdbx_validate_rmsd_bond.bond_deviation 0.039 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 124.04 118.90 5.14 0.60 N 2 1 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.00 121.90 -5.90 0.70 N 3 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.07 108.30 2.77 0.30 N 4 1 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.52 108.30 3.22 0.30 N 5 1 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.87 122.90 -4.03 0.60 N 6 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.05 108.30 2.75 0.30 N 7 1 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 123.20 118.90 4.30 0.60 N 8 1 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 116.69 121.90 -5.21 0.70 N 9 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.63 108.30 2.33 0.30 N 10 1 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.24 108.30 2.94 0.30 N 11 1 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.61 122.90 -4.29 0.60 N 12 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.56 108.30 2.26 0.30 N 13 1 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.14 122.90 -3.76 0.60 N 14 1 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.85 108.30 4.55 0.30 N 15 1 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.26 122.90 -3.64 0.60 N 16 1 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.08 108.30 2.78 0.30 N 17 1 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.02 108.30 2.72 0.30 N 18 1 "O4'" A DC 14 ? ? "C1'" A DC 14 ? ? N1 A DC 14 ? ? 110.53 108.30 2.23 0.30 N 19 1 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.45 118.90 4.55 0.60 N 20 1 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.79 121.90 -5.11 0.70 N 21 1 "O4'" A DC 15 ? ? "C4'" A DC 15 ? ? "C3'" A DC 15 ? ? 109.63 106.00 3.63 0.60 N 22 1 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.74 118.90 3.84 0.60 N 23 1 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 117.17 121.90 -4.73 0.70 N 24 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.46 108.30 3.16 0.30 N 25 1 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.80 108.30 2.50 0.30 N 26 1 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.87 122.90 -4.03 0.60 N 27 1 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.22 108.30 1.92 0.30 N 28 1 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.04 121.90 -4.86 0.70 N 29 1 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 122.80 118.90 3.90 0.60 N 30 1 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.80 121.90 -5.10 0.70 N 31 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.12 108.30 2.82 0.30 N 32 1 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.58 108.30 2.28 0.30 N 33 1 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 118.98 122.90 -3.92 0.60 N 34 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.36 108.30 2.06 0.30 N 35 2 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.18 118.90 4.28 0.60 N 36 2 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.13 121.90 -5.77 0.70 N 37 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.32 108.30 3.02 0.30 N 38 2 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.86 122.90 -4.04 0.60 N 39 2 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.39 108.30 3.09 0.30 N 40 2 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.30 108.30 3.00 0.30 N 41 2 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.59 118.90 3.69 0.60 N 42 2 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.30 121.90 -4.60 0.70 N 43 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.09 108.30 2.79 0.30 N 44 2 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.67 108.30 3.37 0.30 N 45 2 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.80 122.90 -4.10 0.60 N 46 2 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.72 122.90 -4.18 0.60 N 47 2 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.09 108.30 2.79 0.30 N 48 2 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 119.28 122.90 -3.62 0.60 N 49 2 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 112.25 108.30 3.95 0.30 N 50 2 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.12 122.90 -3.78 0.60 N 51 2 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.34 108.30 2.04 0.30 N 52 2 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.66 118.90 4.76 0.60 N 53 2 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.37 121.90 -5.53 0.70 N 54 2 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.86 118.90 3.96 0.60 N 55 2 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.70 121.90 -5.20 0.70 N 56 2 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.35 108.30 3.05 0.30 N 57 2 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.24 108.30 2.94 0.30 N 58 2 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.88 122.90 -4.02 0.60 N 59 2 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 112.09 108.30 3.79 0.30 N 60 2 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 123.17 118.90 4.27 0.60 N 61 2 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.85 121.90 -5.05 0.70 N 62 2 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 122.91 118.90 4.01 0.60 N 63 2 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.42 121.90 -5.48 0.70 N 64 2 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.36 108.30 4.06 0.30 N 65 2 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.19 108.30 2.89 0.30 N 66 2 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 118.80 122.90 -4.10 0.60 N 67 3 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.25 118.90 4.35 0.60 N 68 3 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.48 121.90 -5.42 0.70 N 69 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.10 108.30 2.80 0.30 N 70 3 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.24 108.30 2.94 0.30 N 71 3 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.08 122.90 -3.82 0.60 N 72 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.49 108.30 3.19 0.30 N 73 3 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.88 108.30 2.58 0.30 N 74 3 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.55 118.90 3.65 0.60 N 75 3 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.51 121.90 -4.39 0.70 N 76 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.11 108.30 3.81 0.30 N 77 3 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.64 108.30 2.34 0.30 N 78 3 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.75 108.30 2.45 0.30 N 79 3 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 113.29 108.30 4.99 0.30 N 80 3 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.56 108.30 2.26 0.30 N 81 3 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.07 122.90 -3.83 0.60 N 82 3 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.53 108.30 4.23 0.30 N 83 3 "O4'" A DC 14 ? ? "C1'" A DC 14 ? ? N1 A DC 14 ? ? 110.37 108.30 2.07 0.30 N 84 3 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.73 118.90 4.83 0.60 N 85 3 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.84 121.90 -5.06 0.70 N 86 3 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.81 118.90 3.91 0.60 N 87 3 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.68 121.90 -5.22 0.70 N 88 3 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.76 108.30 3.46 0.30 N 89 3 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.32 108.30 2.02 0.30 N 90 3 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.64 108.30 3.34 0.30 N 91 3 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.78 108.30 2.48 0.30 N 92 3 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.32 121.90 -4.58 0.70 N 93 3 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 123.14 118.90 4.24 0.60 N 94 3 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.24 121.90 -5.66 0.70 N 95 3 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.50 108.30 4.20 0.30 N 96 3 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.89 108.30 3.59 0.30 N 97 3 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.07 122.90 -3.83 0.60 N 98 4 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.85 118.90 4.95 0.60 N 99 4 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.08 121.90 -5.82 0.70 N 100 4 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.72 108.30 2.42 0.30 N 101 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.11 108.30 2.81 0.30 N 102 4 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 123.32 118.90 4.42 0.60 N 103 4 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 116.57 121.90 -5.33 0.70 N 104 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.28 108.30 2.98 0.30 N 105 4 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.64 108.30 2.34 0.30 N 106 4 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.10 122.90 -3.80 0.60 N 107 4 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.70 122.90 -4.20 0.60 N 108 4 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 113.25 108.30 4.95 0.30 N 109 4 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 115.63 108.30 7.33 0.30 N 110 4 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.84 108.30 3.54 0.30 N 111 4 "O4'" A DC 14 ? ? "C1'" A DC 14 ? ? N1 A DC 14 ? ? 110.22 108.30 1.92 0.30 N 112 4 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 124.19 118.90 5.29 0.60 N 113 4 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.09 121.90 -5.81 0.70 N 114 4 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 117.08 121.90 -4.82 0.70 N 115 4 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.12 108.30 2.82 0.30 N 116 4 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.42 108.30 2.12 0.30 N 117 4 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.06 122.90 -3.84 0.60 N 118 4 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.24 108.30 2.94 0.30 N 119 4 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.15 108.30 2.85 0.30 N 120 4 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.68 118.90 3.78 0.60 N 121 4 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.87 121.90 -5.03 0.70 N 122 4 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 122.84 118.90 3.94 0.60 N 123 4 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.51 121.90 -5.39 0.70 N 124 4 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.01 108.30 3.71 0.30 N 125 4 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.66 108.30 3.36 0.30 N 126 4 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.28 122.90 -3.62 0.60 N 127 5 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.47 118.90 4.57 0.60 N 128 5 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.34 121.90 -5.56 0.70 N 129 5 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.32 108.30 2.02 0.30 N 130 5 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.15 122.90 -3.75 0.60 N 131 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.47 108.30 3.17 0.30 N 132 5 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.93 122.90 -3.97 0.60 N 133 5 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.66 108.30 2.36 0.30 N 134 5 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.38 121.90 -4.52 0.70 N 135 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.58 108.30 3.28 0.30 N 136 5 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.99 108.30 2.69 0.30 N 137 5 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 117.66 122.90 -5.24 0.60 N 138 5 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? "C2'" A DT 10 ? ? 100.42 105.90 -5.48 0.80 N 139 5 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.24 108.30 2.94 0.30 N 140 5 N3 A DT 10 ? ? C2 A DT 10 ? ? O2 A DT 10 ? ? 118.52 122.30 -3.78 0.60 N 141 5 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.42 108.30 2.12 0.30 N 142 5 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.81 122.90 -4.09 0.60 N 143 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.77 108.30 3.47 0.30 N 144 5 N3 A DT 13 ? ? C2 A DT 13 ? ? O2 A DT 13 ? ? 118.68 122.30 -3.62 0.60 N 145 5 "O4'" A DC 14 ? ? "C1'" A DC 14 ? ? N1 A DC 14 ? ? 110.53 108.30 2.23 0.30 N 146 5 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.71 118.90 4.81 0.60 N 147 5 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.61 121.90 -5.29 0.70 N 148 5 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.74 118.90 3.84 0.60 N 149 5 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.71 121.90 -5.19 0.70 N 150 5 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.75 108.30 3.45 0.30 N 151 5 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.17 122.90 -3.73 0.60 N 152 5 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.58 108.30 2.28 0.30 N 153 5 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.88 118.90 3.98 0.60 N 154 5 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.92 121.90 -4.98 0.70 N 155 5 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 122.98 118.90 4.08 0.60 N 156 5 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.53 121.90 -5.37 0.70 N 157 5 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.39 108.30 4.09 0.30 N 158 5 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.09 108.30 2.79 0.30 N 159 5 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.15 122.90 -3.75 0.60 N 160 6 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.38 118.90 4.48 0.60 N 161 6 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 115.96 121.90 -5.94 0.70 N 162 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.55 108.30 3.25 0.30 N 163 6 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.47 108.30 2.17 0.30 N 164 6 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.00 122.90 -3.90 0.60 N 165 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.35 108.30 2.05 0.30 N 166 6 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.30 108.30 3.00 0.30 N 167 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.63 108.30 2.33 0.30 N 168 6 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.93 122.90 -3.97 0.60 N 169 6 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.60 108.30 4.30 0.30 N 170 6 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.09 122.90 -3.81 0.60 N 171 6 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.97 108.30 2.67 0.30 N 172 6 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.62 108.30 2.32 0.30 N 173 6 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.01 122.90 -3.89 0.60 N 174 6 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 111.35 108.30 3.05 0.30 N 175 6 N3 A DT 13 ? ? C2 A DT 13 ? ? O2 A DT 13 ? ? 118.69 122.30 -3.61 0.60 N 176 6 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.49 118.90 4.59 0.60 N 177 6 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.53 121.90 -5.37 0.70 N 178 6 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.98 118.90 4.08 0.60 N 179 6 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.63 121.90 -5.27 0.70 N 180 6 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.70 108.30 3.40 0.30 N 181 6 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.22 108.30 2.92 0.30 N 182 6 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.03 122.90 -3.87 0.60 N 183 6 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.17 108.30 1.87 0.30 N 184 6 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 119.21 122.90 -3.69 0.60 N 185 6 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.40 121.90 -4.50 0.70 N 186 6 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 123.28 118.90 4.38 0.60 N 187 6 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.24 121.90 -5.66 0.70 N 188 6 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.39 108.30 4.09 0.30 N 189 6 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.18 108.30 2.88 0.30 N 190 6 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.18 122.90 -3.72 0.60 N 191 7 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.42 118.90 4.52 0.60 N 192 7 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 115.87 121.90 -6.03 0.70 N 193 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.98 108.30 2.68 0.30 N 194 7 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 119.11 122.90 -3.79 0.60 N 195 7 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.31 108.30 3.01 0.30 N 196 7 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.88 108.30 2.58 0.30 N 197 7 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.61 118.90 3.71 0.60 N 198 7 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.31 121.90 -4.59 0.70 N 199 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.82 108.30 3.52 0.30 N 200 7 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.69 108.30 3.39 0.30 N 201 7 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.88 122.90 -4.02 0.60 N 202 7 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.26 122.90 -4.64 0.60 N 203 7 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.85 108.30 4.55 0.30 N 204 7 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.50 122.90 -4.40 0.60 N 205 7 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.07 108.30 2.77 0.30 N 206 7 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.55 108.30 2.25 0.30 N 207 7 "O4'" A DC 14 ? ? "C1'" A DC 14 ? ? N1 A DC 14 ? ? 111.14 108.30 2.84 0.30 N 208 7 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 124.01 118.90 5.11 0.60 N 209 7 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.28 121.90 -5.62 0.70 N 210 7 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.67 118.90 3.77 0.60 N 211 7 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.90 121.90 -5.00 0.70 N 212 7 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.38 108.30 3.08 0.30 N 213 7 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 110.74 108.30 2.44 0.30 N 214 7 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.01 122.90 -3.89 0.60 N 215 7 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.81 108.30 3.51 0.30 N 216 7 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 111.11 108.30 2.81 0.30 N 217 7 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.21 121.90 -4.69 0.70 N 218 7 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 123.40 118.90 4.50 0.60 N 219 7 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.24 121.90 -5.66 0.70 N 220 7 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.86 108.30 3.56 0.30 N 221 7 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 110.95 108.30 2.65 0.30 N 222 7 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.12 122.90 -3.78 0.60 N 223 8 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.68 118.90 4.78 0.60 N 224 8 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 115.75 121.90 -6.15 0.70 N 225 8 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.20 108.30 2.90 0.30 N 226 8 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 110.34 108.30 2.04 0.30 N 227 8 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.90 122.90 -4.00 0.60 N 228 8 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.17 108.30 2.87 0.30 N 229 8 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.68 108.30 3.38 0.30 N 230 8 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 122.63 118.90 3.73 0.60 N 231 8 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.33 121.90 -4.57 0.70 N 232 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.79 108.30 2.49 0.30 N 233 8 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 110.79 108.30 2.49 0.30 N 234 8 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.23 122.90 -3.67 0.60 N 235 8 N3 A DT 10 ? ? C2 A DT 10 ? ? O2 A DT 10 ? ? 118.69 122.30 -3.61 0.60 N 236 8 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.66 122.90 -4.24 0.60 N 237 8 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 110.81 108.30 2.51 0.30 N 238 8 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.68 108.30 2.38 0.30 N 239 8 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 112.01 108.30 3.71 0.30 N 240 8 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.34 118.90 4.44 0.60 N 241 8 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.52 121.90 -5.38 0.70 N 242 8 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 123.22 118.90 4.32 0.60 N 243 8 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.60 121.90 -5.30 0.70 N 244 8 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.78 108.30 2.48 0.30 N 245 8 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 112.05 108.30 3.75 0.30 N 246 8 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 119.22 122.90 -3.68 0.60 N 247 8 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.69 108.30 3.39 0.30 N 248 8 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.62 118.90 3.72 0.60 N 249 8 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.63 121.90 -5.27 0.70 N 250 8 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 123.05 118.90 4.15 0.60 N 251 8 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.52 121.90 -5.38 0.70 N 252 8 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.80 108.30 3.50 0.30 N 253 8 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.81 108.30 3.51 0.30 N 254 8 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 118.65 122.90 -4.25 0.60 N 255 9 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 123.59 118.90 4.69 0.60 N 256 9 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.07 121.90 -5.83 0.70 N 257 9 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.90 108.30 2.60 0.30 N 258 9 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.96 122.90 -3.94 0.60 N 259 9 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.26 108.30 2.96 0.30 N 260 9 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.67 122.90 -4.23 0.60 N 261 9 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.48 108.30 3.18 0.30 N 262 9 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.48 121.90 -4.42 0.70 N 263 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.65 108.30 3.35 0.30 N 264 9 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.44 108.30 3.14 0.30 N 265 9 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.25 122.90 -3.65 0.60 N 266 9 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.64 108.30 3.34 0.30 N 267 9 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.72 122.90 -4.18 0.60 N 268 9 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 111.79 108.30 3.49 0.30 N 269 9 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.17 108.30 1.87 0.30 N 270 9 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.15 122.90 -3.75 0.60 N 271 9 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.87 108.30 2.57 0.30 N 272 9 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 123.56 118.90 4.66 0.60 N 273 9 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 116.55 121.90 -5.35 0.70 N 274 9 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.92 118.90 4.02 0.60 N 275 9 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.67 121.90 -5.23 0.70 N 276 9 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.02 108.30 2.72 0.30 N 277 9 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.55 108.30 3.25 0.30 N 278 9 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.95 122.90 -3.95 0.60 N 279 9 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.60 108.30 3.30 0.30 N 280 9 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 118.77 122.90 -4.13 0.60 N 281 9 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.57 108.30 2.27 0.30 N 282 9 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 117.57 121.90 -4.33 0.70 N 283 9 "O4'" A DC 20 ? ? "C1'" A DC 20 ? ? N1 A DC 20 ? ? 110.20 108.30 1.90 0.30 N 284 9 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 123.45 118.90 4.55 0.60 N 285 9 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.17 121.90 -5.73 0.70 N 286 9 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 112.40 108.30 4.10 0.30 N 287 9 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.48 108.30 3.18 0.30 N 288 9 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 119.02 122.90 -3.88 0.60 N 289 10 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 124.02 118.90 5.12 0.60 N 290 10 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 115.96 121.90 -5.94 0.70 N 291 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.05 108.30 2.75 0.30 N 292 10 "O4'" A DT 4 ? ? "C1'" A DT 4 ? ? N1 A DT 4 ? ? 111.28 108.30 2.98 0.30 N 293 10 C6 A DT 4 ? ? C5 A DT 4 ? ? C7 A DT 4 ? ? 118.73 122.90 -4.17 0.60 N 294 10 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 112.13 108.30 3.83 0.30 N 295 10 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.83 108.30 3.53 0.30 N 296 10 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.32 121.90 -4.58 0.70 N 297 10 "O4'" A DT 9 ? ? "C1'" A DT 9 ? ? N1 A DT 9 ? ? 111.05 108.30 2.75 0.30 N 298 10 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.98 122.90 -3.92 0.60 N 299 10 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.36 108.30 3.06 0.30 N 300 10 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.80 122.90 -4.10 0.60 N 301 10 "O4'" A DT 11 ? ? "C1'" A DT 11 ? ? N1 A DT 11 ? ? 112.81 108.30 4.51 0.30 N 302 10 C6 A DT 11 ? ? C5 A DT 11 ? ? C7 A DT 11 ? ? 118.76 122.90 -4.14 0.60 N 303 10 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.84 108.30 3.54 0.30 N 304 10 "O4'" A DT 13 ? ? "C1'" A DT 13 ? ? N1 A DT 13 ? ? 110.38 108.30 2.08 0.30 N 305 10 C6 A DT 13 ? ? C5 A DT 13 ? ? C7 A DT 13 ? ? 118.10 122.90 -4.80 0.60 N 306 10 N1 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 124.37 118.90 5.47 0.60 N 307 10 N3 A DC 14 ? ? C2 A DC 14 ? ? O2 A DC 14 ? ? 115.48 121.90 -6.42 0.70 N 308 10 N1 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 122.70 118.90 3.80 0.60 N 309 10 N3 A DC 15 ? ? C2 A DC 15 ? ? O2 A DC 15 ? ? 116.77 121.90 -5.13 0.70 N 310 10 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.47 108.30 3.17 0.30 N 311 10 "O4'" A DT 17 ? ? "C1'" A DT 17 ? ? N1 A DT 17 ? ? 111.49 108.30 3.19 0.30 N 312 10 C6 A DT 17 ? ? C5 A DT 17 ? ? C7 A DT 17 ? ? 118.83 122.90 -4.07 0.60 N 313 10 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.25 108.30 2.95 0.30 N 314 10 "O4'" A DC 19 ? ? "C1'" A DC 19 ? ? N1 A DC 19 ? ? 110.40 108.30 2.10 0.30 N 315 10 N1 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 122.67 118.90 3.77 0.60 N 316 10 N3 A DC 19 ? ? C2 A DC 19 ? ? O2 A DC 19 ? ? 116.73 121.90 -5.17 0.70 N 317 10 N1 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 122.82 118.90 3.92 0.60 N 318 10 N3 A DC 20 ? ? C2 A DC 20 ? ? O2 A DC 20 ? ? 116.75 121.90 -5.15 0.70 N 319 10 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.75 108.30 3.45 0.30 N 320 10 "O4'" A DT 22 ? ? "C1'" A DT 22 ? ? N1 A DT 22 ? ? 111.69 108.30 3.39 0.30 N 321 10 C6 A DT 22 ? ? C5 A DT 22 ? ? C7 A DT 22 ? ? 118.94 122.90 -3.96 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 8 ? ? 0.080 'SIDE CHAIN' 2 2 DC A 1 ? ? 0.074 'SIDE CHAIN' 3 2 DC A 6 ? ? 0.112 'SIDE CHAIN' 4 2 DT A 9 ? ? 0.069 'SIDE CHAIN' 5 3 DC A 6 ? ? 0.156 'SIDE CHAIN' 6 3 DT A 10 ? ? 0.117 'SIDE CHAIN' 7 3 DC A 19 ? ? 0.093 'SIDE CHAIN' 8 4 DC A 1 ? ? 0.089 'SIDE CHAIN' 9 4 DC A 6 ? ? 0.062 'SIDE CHAIN' 10 4 DT A 10 ? ? 0.057 'SIDE CHAIN' 11 4 DC A 19 ? ? 0.100 'SIDE CHAIN' 12 5 DC A 1 ? ? 0.096 'SIDE CHAIN' 13 5 DC A 6 ? ? 0.114 'SIDE CHAIN' 14 5 DT A 10 ? ? 0.106 'SIDE CHAIN' 15 6 DC A 6 ? ? 0.107 'SIDE CHAIN' 16 6 DT A 13 ? ? 0.067 'SIDE CHAIN' 17 7 DC A 1 ? ? 0.076 'SIDE CHAIN' 18 7 DC A 6 ? ? 0.121 'SIDE CHAIN' 19 7 DC A 19 ? ? 0.062 'SIDE CHAIN' 20 8 DC A 6 ? ? 0.131 'SIDE CHAIN' 21 8 DG A 8 ? ? 0.069 'SIDE CHAIN' 22 9 DC A 1 ? ? 0.069 'SIDE CHAIN' 23 9 DC A 6 ? ? 0.142 'SIDE CHAIN' 24 9 DG A 16 ? ? 0.055 'SIDE CHAIN' 25 9 DC A 19 ? ? 0.092 'SIDE CHAIN' 26 10 DC A 6 ? ? 0.127 'SIDE CHAIN' 27 10 DT A 10 ? ? 0.113 'SIDE CHAIN' 28 10 DC A 19 ? ? 0.068 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8BV6 'double helix' 8BV6 'parallel strands' 8BV6 'bulge loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 16 1_555 0.922 -0.759 1.559 -6.725 -16.001 -18.451 1 A_DC1:DG16_A A 1 ? A 16 ? 19 1 1 A DNR 7 1_555 A DC 15 1_555 1.954 1.365 0.021 -3.092 -0.366 178.382 2 A_DNR7:DC15_A A 7 ? A 15 ? 15 2 1 A DNR 2 1_555 A DC 20 1_555 1.962 1.484 0.029 -3.621 -0.217 178.397 3 A_DNR2:DC20_A A 2 ? A 20 ? 15 2 1 A DC 6 1_555 A DG 21 1_555 0.372 -0.251 0.779 -12.075 9.445 -4.724 4 A_DC6:DG21_A A 6 ? A 21 ? 19 1 1 A DG 3 1_555 A DC 14 1_555 -1.233 -0.439 0.053 5.820 17.486 -7.302 5 A_DG3:DC14_A A 3 ? A 14 ? 19 1 1 A DG 8 1_555 A DC 19 1_555 -0.389 -0.238 0.832 12.738 6.860 -2.014 6 A_DG8:DC19_A A 8 ? A 19 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 16 1_555 A DNR 7 1_555 A DC 15 1_555 -2.188 2.937 2.915 162.958 -30.809 -22.912 -1.010 1.379 3.225 16.457 87.045 -166.128 1 AA_DC1DNR7:DC15DG16_AA A 1 ? A 16 ? A 7 ? A 15 ? 1 A DNR 7 1_555 A DC 15 1_555 A DNR 2 1_555 A DC 20 1_555 -1.724 2.658 -0.447 -148.114 -100.917 177.928 1.327 0.865 -0.448 -50.459 74.057 179.986 2 AA_DNR7DNR2:DC20DC15_AA A 7 ? A 15 ? A 2 ? A 20 ? 1 A DNR 2 1_555 A DC 20 1_555 A DC 6 1_555 A DG 21 1_555 3.932 -3.438 -0.389 -167.778 36.938 -53.442 1.489 0.909 3.912 -18.954 -86.091 -172.673 3 AA_DNR2DC6:DG21DC20_AA A 2 ? A 20 ? A 6 ? A 21 ? # _pdbx_audit_support.funding_organization 'Spanish Ministry of Science, Innovation, and Universities' _pdbx_audit_support.country Spain _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #