HEADER SIGNALING PROTEIN 07-DEC-22 8BWM TITLE CRYSTAL STRUCTURE OF HUMAN TWISTED GASTRULATION PROTEIN HOMOLOG 1 TITLE 2 (TWSG1) IN COMPLEX WITH HUMAN GROWTH DIFFERENTIATION FACTOR 5 (GDF5) TITLE 3 AND CALCIUM, LONG-WAVELENGTH X-RAY DATASET (4042 EV) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GROWTH/DIFFERENTIATION FACTOR 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GDF-5,BONE MORPHOGENETIC PROTEIN 14,BMP-14,CARTILAGE-DERIVED COMPND 5 MORPHOGENETIC PROTEIN 1,CDMP-1,LIPOPOLYSACCHARIDE-ASSOCIATED PROTEIN COMPND 6 4,LAP-4,LPS-ASSOCIATED PROTEIN 4,RADOTERMIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TWISTED GASTRULATION PROTEIN HOMOLOG 1; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GDF5, BMP14, CDMP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: TWSG1, TSG, PSEC0250; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HEK293T; SOURCE 18 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-3216; SOURCE 19 EXPRESSION_SYSTEM_ORGAN: KIDNEY KEYWDS TWISTED GASTRULATION PROTEIN HOMOLOG 1 (TWSG1), GROWTH KEYWDS 2 DIFFERENTIATION FACTOR 5 (GDF5), TRANSFORMING GROWTH FACTOR BETA KEYWDS 3 (TGF-BETA) SIGNALLING PATHWAY, LONG-WAVELENGTH X-RAYS., SIGNALING KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.MALINAUSKAS,A.F.RUDOLF,G.MOORE,H.EGGINGTON,H.BELNOUE-DAVIS,K.EL AUTHOR 2 OMARI,R.E.WOOLLEY,S.C.GRIFFITHS,R.DUMAN,A.WAGNER,S.J.LEEDHAM, AUTHOR 3 C.BALDOCK,H.ASHE,C.SIEBOLD REVDAT 1 19-JUN-24 8BWM 0 JRNL AUTH T.MALINAUSKAS,G.MOORE,A.F.RUDOLF,H.EGGINGTON, JRNL AUTH 2 H.L.BELNOUE-DAVIS,K.EL OMARI,S.C.GRIFFITHS,R.E.WOOLLEY, JRNL AUTH 3 R.DUMAN,A.WAGNER,S.J.LEEDHAM,C.BALDOCK,H.L.ASHE,C.SIEBOLD JRNL TITL MOLECULAR MECHANISM OF BMP SIGNAL CONTROL BY TWISTED JRNL TITL 2 GASTRULATION. JRNL REF NAT COMMUN V. 15 4976 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38862520 JRNL DOI 10.1038/S41467-024-49065-8 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 68.3 REMARK 3 NUMBER OF REFLECTIONS : 12359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 603 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.9200 - 3.9600 1.00 4480 225 0.2062 0.2642 REMARK 3 2 3.9600 - 3.1400 0.99 4254 197 0.2344 0.2830 REMARK 3 3 3.1400 - 2.7500 0.64 2667 168 0.2879 0.3512 REMARK 3 4 2.7500 - 2.5000 0.08 355 13 0.3809 0.3547 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.334 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.299 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2443 REMARK 3 ANGLE : 0.510 3309 REMARK 3 CHIRALITY : 0.040 370 REMARK 3 PLANARITY : 0.004 429 REMARK 3 DIHEDRAL : 9.667 915 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 397 THROUGH 501) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5933 -17.5131 13.6578 REMARK 3 T TENSOR REMARK 3 T11: 0.3642 T22: 0.4317 REMARK 3 T33: 0.4196 T12: 0.0294 REMARK 3 T13: -0.0881 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 4.5455 L22: 1.7374 REMARK 3 L33: 8.8114 L12: -0.6858 REMARK 3 L13: -5.9541 L23: 1.4231 REMARK 3 S TENSOR REMARK 3 S11: -0.3325 S12: 0.0776 S13: -0.1810 REMARK 3 S21: 0.2044 S22: 0.0585 S23: 0.1216 REMARK 3 S31: 0.4087 S32: -0.2297 S33: 0.2669 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 398 THROUGH 501) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8144 -11.0069 6.1002 REMARK 3 T TENSOR REMARK 3 T11: 0.2973 T22: 0.3426 REMARK 3 T33: 0.3768 T12: -0.0687 REMARK 3 T13: -0.1498 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 3.6528 L22: 3.2020 REMARK 3 L33: 7.5942 L12: 1.2585 REMARK 3 L13: -4.6011 L23: -3.3135 REMARK 3 S TENSOR REMARK 3 S11: 0.0191 S12: -0.5649 S13: -0.1238 REMARK 3 S21: 0.2044 S22: -0.2650 S23: -0.3565 REMARK 3 S31: -0.3015 S32: 0.7495 S33: 0.2228 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 25 THROUGH 77) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0731 -12.8182 35.0670 REMARK 3 T TENSOR REMARK 3 T11: 0.9505 T22: 1.3426 REMARK 3 T33: 0.8737 T12: 0.0990 REMARK 3 T13: -0.1509 T23: -0.3072 REMARK 3 L TENSOR REMARK 3 L11: 3.5639 L22: 1.9292 REMARK 3 L33: 5.5134 L12: 1.7018 REMARK 3 L13: -2.5658 L23: 0.7640 REMARK 3 S TENSOR REMARK 3 S11: 0.2764 S12: -1.8828 S13: 1.0485 REMARK 3 S21: 0.9870 S22: -0.3300 S23: -1.0276 REMARK 3 S31: -0.3310 S32: 1.7395 S33: -0.0382 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 25 THROUGH 78) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7045 -13.5253 -14.7484 REMARK 3 T TENSOR REMARK 3 T11: 0.7027 T22: 0.8620 REMARK 3 T33: 0.7404 T12: -0.0783 REMARK 3 T13: -0.2224 T23: 0.1954 REMARK 3 L TENSOR REMARK 3 L11: 9.0059 L22: 3.4512 REMARK 3 L33: 5.9198 L12: 0.4716 REMARK 3 L13: 3.2380 L23: 1.1687 REMARK 3 S TENSOR REMARK 3 S11: -0.2109 S12: 1.1443 S13: 0.4136 REMARK 3 S21: -1.0879 S22: 0.2763 S23: 1.6045 REMARK 3 S31: -0.0351 S32: -1.4969 S33: -0.2966 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 398 through 431 or REMARK 3 resid 433 through 469 or resid 471 REMARK 3 through 501)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 398 through 431 or REMARK 3 resid 433 through 469 or resid 471 REMARK 3 through 501)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 25 through 48 or REMARK 3 resid 53 through 77)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "D" and resid 25 through 77) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BWM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1292127228. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I23 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 3.06740 REMARK 200 MONOCHROMATOR : SILICON CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 12M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 (BUILT REMARK 200 20220110), AUTOPROC 1.0.5 REMARK 200 (20211020) REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12362 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.496 REMARK 200 RESOLUTION RANGE LOW (A) : 65.925 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 68.3 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 11.7 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : 1.50700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12.1% W/V PEG 1000, 12.1% W/V PEG REMARK 280 3350, 12.1% V/V MPD, 97 MM CACL2, 0.097 M BICINE/TRIZMA PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.74000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.89100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.63150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.89100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.74000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.63150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 381 REMARK 465 ALA A 382 REMARK 465 PRO A 383 REMARK 465 LEU A 384 REMARK 465 ALA A 385 REMARK 465 THR A 386 REMARK 465 ARG A 387 REMARK 465 GLN A 388 REMARK 465 GLY A 389 REMARK 465 LYS A 390 REMARK 465 ARG A 391 REMARK 465 PRO A 392 REMARK 465 SER A 393 REMARK 465 LYS A 394 REMARK 465 ASN A 395 REMARK 465 LEU A 396 REMARK 465 MET B 381 REMARK 465 ALA B 382 REMARK 465 PRO B 383 REMARK 465 LEU B 384 REMARK 465 ALA B 385 REMARK 465 THR B 386 REMARK 465 ARG B 387 REMARK 465 GLN B 388 REMARK 465 GLY B 389 REMARK 465 LYS B 390 REMARK 465 ARG B 391 REMARK 465 PRO B 392 REMARK 465 SER B 393 REMARK 465 LYS B 394 REMARK 465 ASN B 395 REMARK 465 LEU B 396 REMARK 465 LYS B 397 REMARK 465 GLU C 23 REMARK 465 THR C 24 REMARK 465 GLU C 50 REMARK 465 GLY C 51 REMARK 465 ASN C 52 REMARK 465 ASN C 78 REMARK 465 PRO C 79 REMARK 465 ARG C 80 REMARK 465 ASN C 81 REMARK 465 TYR C 82 REMARK 465 SER C 83 REMARK 465 GLY C 84 REMARK 465 THR C 85 REMARK 465 LEU C 86 REMARK 465 GLU C 87 REMARK 465 VAL C 88 REMARK 465 LEU C 89 REMARK 465 PHE C 90 REMARK 465 GLN C 91 REMARK 465 GLU D 23 REMARK 465 THR D 24 REMARK 465 GLY D 49 REMARK 465 GLU D 50 REMARK 465 GLY D 51 REMARK 465 ASN D 52 REMARK 465 PRO D 79 REMARK 465 ARG D 80 REMARK 465 ASN D 81 REMARK 465 TYR D 82 REMARK 465 SER D 83 REMARK 465 GLY D 84 REMARK 465 THR D 85 REMARK 465 LEU D 86 REMARK 465 GLU D 87 REMARK 465 VAL D 88 REMARK 465 LEU D 89 REMARK 465 PHE D 90 REMARK 465 GLN D 91 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 427 172.03 60.75 REMARK 500 PHE B 427 173.05 60.38 REMARK 500 GLU B 442 61.11 33.58 REMARK 500 SER C 54 -62.63 -102.13 REMARK 500 SER D 54 -62.34 -102.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 413 O REMARK 620 2 ASP A 416 OD2 112.0 REMARK 620 3 HOH A 712 O 173.6 66.8 REMARK 620 4 HOH A 720 O 73.3 115.4 101.3 REMARK 620 5 HOH A 728 O 104.0 139.4 75.3 58.0 REMARK 620 6 HOH C 102 O 80.2 116.1 106.1 127.8 87.4 REMARK 620 7 HOH C 103 O 122.3 62.3 63.3 164.4 112.6 59.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 725 O REMARK 620 2 GLY B 413 O 149.4 REMARK 620 3 ASP B 416 OD2 103.3 97.3 REMARK 620 4 HOH B 723 O 58.7 108.3 71.9 REMARK 620 5 HOH D 206 O 130.6 76.7 73.9 145.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA D 65 O REMARK 620 2 GLU D 69 OE2 101.2 REMARK 620 3 HOH D 209 O 86.9 75.9 REMARK 620 N 1 2 DBREF 8BWM A 382 501 UNP P43026 GDF5_HUMAN 382 501 DBREF 8BWM B 382 501 UNP P43026 GDF5_HUMAN 382 501 DBREF 8BWM C 26 83 UNP Q9GZX9 TWSG1_HUMAN 26 83 DBREF 8BWM D 26 83 UNP Q9GZX9 TWSG1_HUMAN 26 83 SEQADV 8BWM MET A 381 UNP P43026 INITIATING METHIONINE SEQADV 8BWM MET B 381 UNP P43026 INITIATING METHIONINE SEQADV 8BWM GLU C 23 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM THR C 24 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLY C 25 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLY C 84 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM THR C 85 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM LEU C 86 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLU C 87 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM VAL C 88 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM LEU C 89 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM PHE C 90 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLN C 91 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLU D 23 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM THR D 24 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLY D 25 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLY D 84 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM THR D 85 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM LEU D 86 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLU D 87 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM VAL D 88 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM LEU D 89 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM PHE D 90 UNP Q9GZX9 EXPRESSION TAG SEQADV 8BWM GLN D 91 UNP Q9GZX9 EXPRESSION TAG SEQRES 1 A 121 MET ALA PRO LEU ALA THR ARG GLN GLY LYS ARG PRO SER SEQRES 2 A 121 LYS ASN LEU LYS ALA ARG CYS SER ARG LYS ALA LEU HIS SEQRES 3 A 121 VAL ASN PHE LYS ASP MET GLY TRP ASP ASP TRP ILE ILE SEQRES 4 A 121 ALA PRO LEU GLU TYR GLU ALA PHE HIS CYS GLU GLY LEU SEQRES 5 A 121 CYS GLU PHE PRO LEU ARG SER HIS LEU GLU PRO THR ASN SEQRES 6 A 121 HIS ALA VAL ILE GLN THR LEU MET ASN SER MET ASP PRO SEQRES 7 A 121 GLU SER THR PRO PRO THR CYS CYS VAL PRO THR ARG LEU SEQRES 8 A 121 SER PRO ILE SER ILE LEU PHE ILE ASP SER ALA ASN ASN SEQRES 9 A 121 VAL VAL TYR LYS GLN TYR GLU ASP MET VAL VAL GLU SER SEQRES 10 A 121 CYS GLY CYS ARG SEQRES 1 B 121 MET ALA PRO LEU ALA THR ARG GLN GLY LYS ARG PRO SER SEQRES 2 B 121 LYS ASN LEU LYS ALA ARG CYS SER ARG LYS ALA LEU HIS SEQRES 3 B 121 VAL ASN PHE LYS ASP MET GLY TRP ASP ASP TRP ILE ILE SEQRES 4 B 121 ALA PRO LEU GLU TYR GLU ALA PHE HIS CYS GLU GLY LEU SEQRES 5 B 121 CYS GLU PHE PRO LEU ARG SER HIS LEU GLU PRO THR ASN SEQRES 6 B 121 HIS ALA VAL ILE GLN THR LEU MET ASN SER MET ASP PRO SEQRES 7 B 121 GLU SER THR PRO PRO THR CYS CYS VAL PRO THR ARG LEU SEQRES 8 B 121 SER PRO ILE SER ILE LEU PHE ILE ASP SER ALA ASN ASN SEQRES 9 B 121 VAL VAL TYR LYS GLN TYR GLU ASP MET VAL VAL GLU SER SEQRES 10 B 121 CYS GLY CYS ARG SEQRES 1 C 69 GLU THR GLY CYS ASN LYS ALA LEU CYS ALA SER ASP VAL SEQRES 2 C 69 SER LYS CYS LEU ILE GLN GLU LEU CYS GLN CYS ARG PRO SEQRES 3 C 69 GLY GLU GLY ASN CYS SER CYS CYS LYS GLU CYS MET LEU SEQRES 4 C 69 CYS LEU GLY ALA LEU TRP ASP GLU CYS CYS ASP CYS VAL SEQRES 5 C 69 GLY MET CYS ASN PRO ARG ASN TYR SER GLY THR LEU GLU SEQRES 6 C 69 VAL LEU PHE GLN SEQRES 1 D 69 GLU THR GLY CYS ASN LYS ALA LEU CYS ALA SER ASP VAL SEQRES 2 D 69 SER LYS CYS LEU ILE GLN GLU LEU CYS GLN CYS ARG PRO SEQRES 3 D 69 GLY GLU GLY ASN CYS SER CYS CYS LYS GLU CYS MET LEU SEQRES 4 D 69 CYS LEU GLY ALA LEU TRP ASP GLU CYS CYS ASP CYS VAL SEQRES 5 D 69 GLY MET CYS ASN PRO ARG ASN TYR SER GLY THR LEU GLU SEQRES 6 D 69 VAL LEU PHE GLN HET CA A 601 1 HET CA B 601 1 HET CA D 101 1 HETNAM CA CALCIUM ION FORMUL 5 CA 3(CA 2+) FORMUL 8 HOH *70(H2 O) HELIX 1 AA1 LYS A 410 GLY A 413 5 4 HELIX 2 AA2 ARG A 438 GLU A 442 5 5 HELIX 3 AA3 THR A 444 ASP A 457 1 14 HELIX 4 AA4 LYS B 410 GLY B 413 5 4 HELIX 5 AA5 ARG B 438 GLU B 442 5 5 HELIX 6 AA6 THR B 444 ASP B 457 1 14 HELIX 7 AA7 ASN C 27 GLN C 41 1 15 HELIX 8 AA8 CYS C 55 GLY C 64 1 10 HELIX 9 AA9 LEU C 66 CYS C 71 1 6 HELIX 10 AB1 ASP C 72 GLY C 75 5 4 HELIX 11 AB2 ASN D 27 GLN D 41 1 15 HELIX 12 AB3 CYS D 55 GLY D 64 1 10 HELIX 13 AB4 LEU D 66 CYS D 71 1 6 HELIX 14 AB5 ASP D 72 VAL D 74 5 3 SHEET 1 AA1 2 SER A 401 LYS A 403 0 SHEET 2 AA1 2 HIS A 428 GLU A 430 -1 O HIS A 428 N LYS A 403 SHEET 1 AA2 2 HIS A 406 ASN A 408 0 SHEET 2 AA2 2 GLU A 423 GLU A 425 -1 O TYR A 424 N VAL A 407 SHEET 1 AA3 3 ILE A 418 ALA A 420 0 SHEET 2 AA3 3 CYS A 466 ILE A 479 -1 O LEU A 477 N ALA A 420 SHEET 3 AA3 3 VAL A 485 CYS A 500 -1 O GLU A 496 N ARG A 470 SHEET 1 AA4 2 SER B 401 LYS B 403 0 SHEET 2 AA4 2 HIS B 428 GLU B 430 -1 O HIS B 428 N LYS B 403 SHEET 1 AA5 2 HIS B 406 ASN B 408 0 SHEET 2 AA5 2 GLU B 423 GLU B 425 -1 O TYR B 424 N VAL B 407 SHEET 1 AA6 3 ILE B 418 ALA B 420 0 SHEET 2 AA6 3 CYS B 466 ILE B 479 -1 O LEU B 477 N ALA B 420 SHEET 3 AA6 3 VAL B 485 CYS B 500 -1 O LYS B 488 N ILE B 476 SSBOND 1 CYS A 400 CYS A 466 1555 1555 2.03 SSBOND 2 CYS A 429 CYS A 498 1555 1555 2.03 SSBOND 3 CYS A 433 CYS A 500 1555 1555 2.03 SSBOND 4 CYS A 465 CYS B 465 1555 1555 2.03 SSBOND 5 CYS B 400 CYS B 466 1555 1555 2.03 SSBOND 6 CYS B 429 CYS B 498 1555 1555 2.03 SSBOND 7 CYS B 433 CYS B 500 1555 1555 2.03 SSBOND 8 CYS C 26 CYS C 73 1555 1555 2.03 SSBOND 9 CYS C 31 CYS C 70 1555 1555 2.03 SSBOND 10 CYS C 38 CYS C 62 1555 1555 2.03 SSBOND 11 CYS C 44 CYS C 59 1555 1555 2.03 SSBOND 12 CYS C 46 CYS C 55 1555 1555 2.03 SSBOND 13 CYS C 53 CYS C 56 1555 1555 2.03 SSBOND 14 CYS C 71 CYS C 77 1555 1555 2.03 SSBOND 15 CYS D 26 CYS D 73 1555 1555 2.03 SSBOND 16 CYS D 31 CYS D 70 1555 1555 2.03 SSBOND 17 CYS D 38 CYS D 62 1555 1555 2.03 SSBOND 18 CYS D 44 CYS D 59 1555 1555 2.03 SSBOND 19 CYS D 46 CYS D 55 1555 1555 2.03 SSBOND 20 CYS D 53 CYS D 56 1555 1555 2.03 SSBOND 21 CYS D 71 CYS D 77 1555 1555 2.04 LINK O GLY A 413 CA CA A 601 1555 1555 2.57 LINK OD2 ASP A 416 CA CA A 601 1555 1555 2.46 LINK CA CA A 601 O HOH A 712 1555 1555 2.65 LINK CA CA A 601 O HOH A 720 1555 1555 2.72 LINK CA CA A 601 O HOH A 728 1555 1555 2.60 LINK CA CA A 601 O HOH C 102 1555 1555 2.55 LINK CA CA A 601 O HOH C 103 1555 1555 2.86 LINK O HOH A 725 CA CA B 601 4545 1555 2.82 LINK O GLY B 413 CA CA B 601 1555 1555 2.72 LINK OD2 ASP B 416 CA CA B 601 1555 1555 2.66 LINK CA CA B 601 O HOH B 723 1555 1555 2.77 LINK CA CA B 601 O HOH D 206 1555 1555 2.57 LINK O ALA D 65 CA CA D 101 1555 1555 2.68 LINK OE2 GLU D 69 CA CA D 101 1555 1555 2.73 LINK CA CA D 101 O HOH D 209 1555 1555 2.58 CISPEP 1 ALA A 420 PRO A 421 0 -1.91 CISPEP 2 PHE A 435 PRO A 436 0 -2.88 CISPEP 3 ALA B 420 PRO B 421 0 -0.26 CISPEP 4 PHE B 435 PRO B 436 0 -4.35 CRYST1 57.480 89.263 97.782 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017397 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010227 0.00000 MTRIX1 1 -0.655691 -0.754807 -0.018298 -23.27205 1 MTRIX2 1 -0.754891 0.654916 0.034992 -11.23296 1 MTRIX3 1 -0.014428 0.036757 -0.999220 20.31344 1 MTRIX1 2 -0.657771 -0.750859 -0.059563 -22.17725 1 MTRIX2 2 -0.753096 0.657028 0.034071 -10.78281 1 MTRIX3 2 0.013552 0.067268 -0.997643 21.32467 1