data_8C0Y # _entry.id 8C0Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8C0Y pdb_00008c0y 10.2210/pdb8c0y/pdb WWPDB D_1292127474 ? ? EMDB EMD-16375 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-06-19 2 'Structure model' 1 1 2024-07-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8C0Y _pdbx_database_status.recvd_initial_deposition_date 2022-12-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody' _pdbx_database_related.db_id EMD-16375 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email martin.hallberg@ki.se _pdbx_contact_author.name_first 'B. Martin' _pdbx_contact_author.name_last Hallberg _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6781-0345 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Das, H.' 1 0000-0001-7495-7065 'Hallberg, B.M.' 2 0000-0002-6781-0345 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary 'Cell Rep Med' ? ? 2666-3791 ? ? 5 ? 101577 101577 'Structural basis of broad SARS-CoV-2 cross-neutralization by affinity-matured public antibodies.' 2024 ? 10.1016/j.xcrm.2024.101577 38761799 ? ? ? ? ? ? ? ? ? US ? ? 1 'Biochem Biophys Res Commun' BBRCA9 0146 1090-2104 ? ? 66 ? 1173 1179 'Delineation of the intimate details of the backbone conformation of pyridine nucleotide coenzymes in aqueous solution.' 1975 ? '10.1016/0006-291x(75)90482-9' ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sheward, D.J.' 1 ? primary 'Pushparaj, P.' 2 ? primary 'Das, H.' 3 ? primary 'Greaney, A.J.' 4 ? primary 'Kim, C.' 5 ? primary 'Kim, S.' 6 ? primary 'Hanke, L.' 7 ? primary 'Hyllner, E.' 8 ? primary 'Dyrdak, R.' 9 ? primary 'Lee, J.' 10 ? primary 'Dopico, X.C.' 11 ? primary 'Dosenovic, P.' 12 ? primary 'Peacock, T.P.' 13 ? primary 'McInerney, G.M.' 14 ? primary 'Albert, J.' 15 ? primary 'Corcoran, M.' 16 ? primary 'Bloom, J.D.' 17 ? primary 'Murrell, B.' 18 ? primary 'Karlsson Hedestam, G.B.' 19 ? primary 'Hallberg, B.M.' 20 ? 1 'Bose, K.S.' 21 ? 1 'Sarma, R.H.' 22 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Spike protein S2' ; 21942.738 1 ? ? ? ? 2 polymer man 'CAB-A17 antibody (variable)' 11395.632 1 ? ? ? ? 3 polymer man 'CAB-A17 antibody (variable)' 12839.197 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNSAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLR SYSFRPTYGVGHQPYRVVVLSFELLHAPATVCG ; ;NLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNSAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLR SYSFRPTYGVGHQPYRVVVLSFELLHAPATVCG ; A ? 2 'polypeptide(L)' no no ;EIVLTQSPGTLSLSPGERASLSCRASQSLSTYLAWYQQKPGQAPRLLIFGASSRASGIPDRFSGGGSGTDFTLTISRLEP EDFAVYYCQQYGSSPRTFGQGTKVEI ; ;EIVLTQSPGTLSLSPGERASLSCRASQSLSTYLAWYQQKPGQAPRLLIFGASSRASGIPDRFSGGGSGTDFTLTISRLEP EDFAVYYCQQYGSSPRTFGQGTKVEI ; D ? 3 'polypeptide(L)' no no ;DVHLVESGGGLIQPGGSLRLSCAASEFIVSANYMSWVRQAPGEGLQWVSVIYPGGSTFYAESVKGRFTISRDNSRNTLYL QMNSLRAEDTGVYYCARDYGDFYFDYWGQGTLVTVS ; ;DVHLVESGGGLIQPGGSLRLSCAASEFIVSANYMSWVRQAPGEGLQWVSVIYPGGSTFYAESVKGRFTISRDNSRNTLYL QMNSLRAEDTGVYYCARDYGDFYFDYWGQGTLVTVS ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 CYS n 1 4 PRO n 1 5 PHE n 1 6 ASP n 1 7 GLU n 1 8 VAL n 1 9 PHE n 1 10 ASN n 1 11 ALA n 1 12 THR n 1 13 ARG n 1 14 PHE n 1 15 ALA n 1 16 SER n 1 17 VAL n 1 18 TYR n 1 19 ALA n 1 20 TRP n 1 21 ASN n 1 22 ARG n 1 23 LYS n 1 24 ARG n 1 25 ILE n 1 26 SER n 1 27 ASN n 1 28 CYS n 1 29 VAL n 1 30 ALA n 1 31 ASP n 1 32 TYR n 1 33 SER n 1 34 VAL n 1 35 LEU n 1 36 TYR n 1 37 ASN n 1 38 SER n 1 39 ALA n 1 40 PRO n 1 41 PHE n 1 42 PHE n 1 43 THR n 1 44 PHE n 1 45 LYS n 1 46 CYS n 1 47 TYR n 1 48 GLY n 1 49 VAL n 1 50 SER n 1 51 PRO n 1 52 THR n 1 53 LYS n 1 54 LEU n 1 55 ASN n 1 56 ASP n 1 57 LEU n 1 58 CYS n 1 59 PHE n 1 60 THR n 1 61 ASN n 1 62 VAL n 1 63 TYR n 1 64 ALA n 1 65 ASP n 1 66 SER n 1 67 PHE n 1 68 VAL n 1 69 ILE n 1 70 ARG n 1 71 GLY n 1 72 ASP n 1 73 GLU n 1 74 VAL n 1 75 ARG n 1 76 GLN n 1 77 ILE n 1 78 ALA n 1 79 PRO n 1 80 GLY n 1 81 GLN n 1 82 THR n 1 83 GLY n 1 84 ASN n 1 85 ILE n 1 86 ALA n 1 87 ASP n 1 88 TYR n 1 89 ASN n 1 90 TYR n 1 91 LYS n 1 92 LEU n 1 93 PRO n 1 94 ASP n 1 95 ASP n 1 96 PHE n 1 97 THR n 1 98 GLY n 1 99 CYS n 1 100 VAL n 1 101 ILE n 1 102 ALA n 1 103 TRP n 1 104 ASN n 1 105 SER n 1 106 ASN n 1 107 LYS n 1 108 LEU n 1 109 ASP n 1 110 SER n 1 111 LYS n 1 112 VAL n 1 113 SER n 1 114 GLY n 1 115 ASN n 1 116 TYR n 1 117 ASN n 1 118 TYR n 1 119 LEU n 1 120 TYR n 1 121 ARG n 1 122 LEU n 1 123 PHE n 1 124 ARG n 1 125 LYS n 1 126 SER n 1 127 ASN n 1 128 LEU n 1 129 LYS n 1 130 PRO n 1 131 PHE n 1 132 GLU n 1 133 ARG n 1 134 ASP n 1 135 ILE n 1 136 SER n 1 137 THR n 1 138 GLU n 1 139 ILE n 1 140 TYR n 1 141 GLN n 1 142 ALA n 1 143 GLY n 1 144 ASN n 1 145 LYS n 1 146 PRO n 1 147 CYS n 1 148 ASN n 1 149 GLY n 1 150 VAL n 1 151 ALA n 1 152 GLY n 1 153 PHE n 1 154 ASN n 1 155 CYS n 1 156 TYR n 1 157 PHE n 1 158 PRO n 1 159 LEU n 1 160 ARG n 1 161 SER n 1 162 TYR n 1 163 SER n 1 164 PHE n 1 165 ARG n 1 166 PRO n 1 167 THR n 1 168 TYR n 1 169 GLY n 1 170 VAL n 1 171 GLY n 1 172 HIS n 1 173 GLN n 1 174 PRO n 1 175 TYR n 1 176 ARG n 1 177 VAL n 1 178 VAL n 1 179 VAL n 1 180 LEU n 1 181 SER n 1 182 PHE n 1 183 GLU n 1 184 LEU n 1 185 LEU n 1 186 HIS n 1 187 ALA n 1 188 PRO n 1 189 ALA n 1 190 THR n 1 191 VAL n 1 192 CYS n 1 193 GLY n 2 1 GLU n 2 2 ILE n 2 3 VAL n 2 4 LEU n 2 5 THR n 2 6 GLN n 2 7 SER n 2 8 PRO n 2 9 GLY n 2 10 THR n 2 11 LEU n 2 12 SER n 2 13 LEU n 2 14 SER n 2 15 PRO n 2 16 GLY n 2 17 GLU n 2 18 ARG n 2 19 ALA n 2 20 SER n 2 21 LEU n 2 22 SER n 2 23 CYS n 2 24 ARG n 2 25 ALA n 2 26 SER n 2 27 GLN n 2 28 SER n 2 29 LEU n 2 30 SER n 2 31 THR n 2 32 TYR n 2 33 LEU n 2 34 ALA n 2 35 TRP n 2 36 TYR n 2 37 GLN n 2 38 GLN n 2 39 LYS n 2 40 PRO n 2 41 GLY n 2 42 GLN n 2 43 ALA n 2 44 PRO n 2 45 ARG n 2 46 LEU n 2 47 LEU n 2 48 ILE n 2 49 PHE n 2 50 GLY n 2 51 ALA n 2 52 SER n 2 53 SER n 2 54 ARG n 2 55 ALA n 2 56 SER n 2 57 GLY n 2 58 ILE n 2 59 PRO n 2 60 ASP n 2 61 ARG n 2 62 PHE n 2 63 SER n 2 64 GLY n 2 65 GLY n 2 66 GLY n 2 67 SER n 2 68 GLY n 2 69 THR n 2 70 ASP n 2 71 PHE n 2 72 THR n 2 73 LEU n 2 74 THR n 2 75 ILE n 2 76 SER n 2 77 ARG n 2 78 LEU n 2 79 GLU n 2 80 PRO n 2 81 GLU n 2 82 ASP n 2 83 PHE n 2 84 ALA n 2 85 VAL n 2 86 TYR n 2 87 TYR n 2 88 CYS n 2 89 GLN n 2 90 GLN n 2 91 TYR n 2 92 GLY n 2 93 SER n 2 94 SER n 2 95 PRO n 2 96 ARG n 2 97 THR n 2 98 PHE n 2 99 GLY n 2 100 GLN n 2 101 GLY n 2 102 THR n 2 103 LYS n 2 104 VAL n 2 105 GLU n 2 106 ILE n 3 1 ASP n 3 2 VAL n 3 3 HIS n 3 4 LEU n 3 5 VAL n 3 6 GLU n 3 7 SER n 3 8 GLY n 3 9 GLY n 3 10 GLY n 3 11 LEU n 3 12 ILE n 3 13 GLN n 3 14 PRO n 3 15 GLY n 3 16 GLY n 3 17 SER n 3 18 LEU n 3 19 ARG n 3 20 LEU n 3 21 SER n 3 22 CYS n 3 23 ALA n 3 24 ALA n 3 25 SER n 3 26 GLU n 3 27 PHE n 3 28 ILE n 3 29 VAL n 3 30 SER n 3 31 ALA n 3 32 ASN n 3 33 TYR n 3 34 MET n 3 35 SER n 3 36 TRP n 3 37 VAL n 3 38 ARG n 3 39 GLN n 3 40 ALA n 3 41 PRO n 3 42 GLY n 3 43 GLU n 3 44 GLY n 3 45 LEU n 3 46 GLN n 3 47 TRP n 3 48 VAL n 3 49 SER n 3 50 VAL n 3 51 ILE n 3 52 TYR n 3 53 PRO n 3 54 GLY n 3 55 GLY n 3 56 SER n 3 57 THR n 3 58 PHE n 3 59 TYR n 3 60 ALA n 3 61 GLU n 3 62 SER n 3 63 VAL n 3 64 LYS n 3 65 GLY n 3 66 ARG n 3 67 PHE n 3 68 THR n 3 69 ILE n 3 70 SER n 3 71 ARG n 3 72 ASP n 3 73 ASN n 3 74 SER n 3 75 ARG n 3 76 ASN n 3 77 THR n 3 78 LEU n 3 79 TYR n 3 80 LEU n 3 81 GLN n 3 82 MET n 3 83 ASN n 3 84 SER n 3 85 LEU n 3 86 ARG n 3 87 ALA n 3 88 GLU n 3 89 ASP n 3 90 THR n 3 91 GLY n 3 92 VAL n 3 93 TYR n 3 94 TYR n 3 95 CYS n 3 96 ALA n 3 97 ARG n 3 98 ASP n 3 99 TYR n 3 100 GLY n 3 101 ASP n 3 102 PHE n 3 103 TYR n 3 104 PHE n 3 105 ASP n 3 106 TYR n 3 107 TRP n 3 108 GLY n 3 109 GLN n 3 110 GLY n 3 111 THR n 3 112 LEU n 3 113 VAL n 3 114 THR n 3 115 VAL n 3 116 SER n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 193 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 106 human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 116 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 334 334 ASN ASN A . n A 1 2 LEU 2 335 335 LEU LEU A . n A 1 3 CYS 3 336 336 CYS CYS A . n A 1 4 PRO 4 337 337 PRO PRO A . n A 1 5 PHE 5 338 338 PHE PHE A . n A 1 6 ASP 6 339 339 ASP ASP A . n A 1 7 GLU 7 340 340 GLU GLU A . n A 1 8 VAL 8 341 341 VAL VAL A . n A 1 9 PHE 9 342 342 PHE PHE A . n A 1 10 ASN 10 343 343 ASN ASN A . n A 1 11 ALA 11 344 344 ALA ALA A . n A 1 12 THR 12 345 345 THR THR A . n A 1 13 ARG 13 346 346 ARG ARG A . n A 1 14 PHE 14 347 347 PHE PHE A . n A 1 15 ALA 15 348 348 ALA ALA A . n A 1 16 SER 16 349 349 SER SER A . n A 1 17 VAL 17 350 350 VAL VAL A . n A 1 18 TYR 18 351 351 TYR TYR A . n A 1 19 ALA 19 352 352 ALA ALA A . n A 1 20 TRP 20 353 353 TRP TRP A . n A 1 21 ASN 21 354 354 ASN ASN A . n A 1 22 ARG 22 355 355 ARG ARG A . n A 1 23 LYS 23 356 356 LYS LYS A . n A 1 24 ARG 24 357 357 ARG ARG A . n A 1 25 ILE 25 358 358 ILE ILE A . n A 1 26 SER 26 359 359 SER SER A . n A 1 27 ASN 27 360 360 ASN ASN A . n A 1 28 CYS 28 361 361 CYS CYS A . n A 1 29 VAL 29 362 362 VAL VAL A . n A 1 30 ALA 30 363 363 ALA ALA A . n A 1 31 ASP 31 364 364 ASP ASP A . n A 1 32 TYR 32 365 365 TYR TYR A . n A 1 33 SER 33 366 366 SER SER A . n A 1 34 VAL 34 367 367 VAL VAL A . n A 1 35 LEU 35 368 368 LEU LEU A . n A 1 36 TYR 36 369 369 TYR TYR A . n A 1 37 ASN 37 370 ? ? ? A . n A 1 38 SER 38 371 ? ? ? A . n A 1 39 ALA 39 372 ? ? ? A . n A 1 40 PRO 40 373 373 PRO PRO A . n A 1 41 PHE 41 374 374 PHE PHE A . n A 1 42 PHE 42 375 375 PHE PHE A . n A 1 43 THR 43 376 376 THR THR A . n A 1 44 PHE 44 377 377 PHE PHE A . n A 1 45 LYS 45 378 378 LYS LYS A . n A 1 46 CYS 46 379 379 CYS CYS A . n A 1 47 TYR 47 380 380 TYR TYR A . n A 1 48 GLY 48 381 381 GLY GLY A . n A 1 49 VAL 49 382 382 VAL VAL A . n A 1 50 SER 50 383 383 SER SER A . n A 1 51 PRO 51 384 384 PRO PRO A . n A 1 52 THR 52 385 385 THR THR A . n A 1 53 LYS 53 386 386 LYS LYS A . n A 1 54 LEU 54 387 387 LEU LEU A . n A 1 55 ASN 55 388 388 ASN ASN A . n A 1 56 ASP 56 389 389 ASP ASP A . n A 1 57 LEU 57 390 390 LEU LEU A . n A 1 58 CYS 58 391 391 CYS CYS A . n A 1 59 PHE 59 392 392 PHE PHE A . n A 1 60 THR 60 393 393 THR THR A . n A 1 61 ASN 61 394 394 ASN ASN A . n A 1 62 VAL 62 395 395 VAL VAL A . n A 1 63 TYR 63 396 396 TYR TYR A . n A 1 64 ALA 64 397 397 ALA ALA A . n A 1 65 ASP 65 398 398 ASP ASP A . n A 1 66 SER 66 399 399 SER SER A . n A 1 67 PHE 67 400 400 PHE PHE A . n A 1 68 VAL 68 401 401 VAL VAL A . n A 1 69 ILE 69 402 402 ILE ILE A . n A 1 70 ARG 70 403 403 ARG ARG A . n A 1 71 GLY 71 404 404 GLY GLY A . n A 1 72 ASP 72 405 405 ASP ASP A . n A 1 73 GLU 73 406 406 GLU GLU A . n A 1 74 VAL 74 407 407 VAL VAL A . n A 1 75 ARG 75 408 408 ARG ARG A . n A 1 76 GLN 76 409 409 GLN GLN A . n A 1 77 ILE 77 410 410 ILE ILE A . n A 1 78 ALA 78 411 411 ALA ALA A . n A 1 79 PRO 79 412 412 PRO PRO A . n A 1 80 GLY 80 413 413 GLY GLY A . n A 1 81 GLN 81 414 414 GLN GLN A . n A 1 82 THR 82 415 415 THR THR A . n A 1 83 GLY 83 416 416 GLY GLY A . n A 1 84 ASN 84 417 417 ASN ASN A . n A 1 85 ILE 85 418 418 ILE ILE A . n A 1 86 ALA 86 419 419 ALA ALA A . n A 1 87 ASP 87 420 420 ASP ASP A . n A 1 88 TYR 88 421 421 TYR TYR A . n A 1 89 ASN 89 422 422 ASN ASN A . n A 1 90 TYR 90 423 423 TYR TYR A . n A 1 91 LYS 91 424 424 LYS LYS A . n A 1 92 LEU 92 425 425 LEU LEU A . n A 1 93 PRO 93 426 426 PRO PRO A . n A 1 94 ASP 94 427 427 ASP ASP A . n A 1 95 ASP 95 428 428 ASP ASP A . n A 1 96 PHE 96 429 429 PHE PHE A . n A 1 97 THR 97 430 430 THR THR A . n A 1 98 GLY 98 431 431 GLY GLY A . n A 1 99 CYS 99 432 432 CYS CYS A . n A 1 100 VAL 100 433 433 VAL VAL A . n A 1 101 ILE 101 434 434 ILE ILE A . n A 1 102 ALA 102 435 435 ALA ALA A . n A 1 103 TRP 103 436 436 TRP TRP A . n A 1 104 ASN 104 437 437 ASN ASN A . n A 1 105 SER 105 438 438 SER SER A . n A 1 106 ASN 106 439 439 ASN ASN A . n A 1 107 LYS 107 440 440 LYS LYS A . n A 1 108 LEU 108 441 441 LEU LEU A . n A 1 109 ASP 109 442 442 ASP ASP A . n A 1 110 SER 110 443 443 SER SER A . n A 1 111 LYS 111 444 444 LYS LYS A . n A 1 112 VAL 112 445 445 VAL VAL A . n A 1 113 SER 113 446 446 SER SER A . n A 1 114 GLY 114 447 447 GLY GLY A . n A 1 115 ASN 115 448 448 ASN ASN A . n A 1 116 TYR 116 449 449 TYR TYR A . n A 1 117 ASN 117 450 450 ASN ASN A . n A 1 118 TYR 118 451 451 TYR TYR A . n A 1 119 LEU 119 452 452 LEU LEU A . n A 1 120 TYR 120 453 453 TYR TYR A . n A 1 121 ARG 121 454 454 ARG ARG A . n A 1 122 LEU 122 455 455 LEU LEU A . n A 1 123 PHE 123 456 456 PHE PHE A . n A 1 124 ARG 124 457 457 ARG ARG A . n A 1 125 LYS 125 458 458 LYS LYS A . n A 1 126 SER 126 459 459 SER SER A . n A 1 127 ASN 127 460 460 ASN ASN A . n A 1 128 LEU 128 461 461 LEU LEU A . n A 1 129 LYS 129 462 462 LYS LYS A . n A 1 130 PRO 130 463 463 PRO PRO A . n A 1 131 PHE 131 464 464 PHE PHE A . n A 1 132 GLU 132 465 465 GLU GLU A . n A 1 133 ARG 133 466 466 ARG ARG A . n A 1 134 ASP 134 467 467 ASP ASP A . n A 1 135 ILE 135 468 468 ILE ILE A . n A 1 136 SER 136 469 469 SER SER A . n A 1 137 THR 137 470 470 THR THR A . n A 1 138 GLU 138 471 471 GLU GLU A . n A 1 139 ILE 139 472 472 ILE ILE A . n A 1 140 TYR 140 473 473 TYR TYR A . n A 1 141 GLN 141 474 474 GLN GLN A . n A 1 142 ALA 142 475 475 ALA ALA A . n A 1 143 GLY 143 476 476 GLY GLY A . n A 1 144 ASN 144 477 477 ASN ASN A . n A 1 145 LYS 145 478 478 LYS LYS A . n A 1 146 PRO 146 479 479 PRO PRO A . n A 1 147 CYS 147 480 480 CYS CYS A . n A 1 148 ASN 148 481 481 ASN ASN A . n A 1 149 GLY 149 482 482 GLY GLY A . n A 1 150 VAL 150 483 483 VAL VAL A . n A 1 151 ALA 151 484 484 ALA ALA A . n A 1 152 GLY 152 485 485 GLY GLY A . n A 1 153 PHE 153 486 486 PHE PHE A . n A 1 154 ASN 154 487 487 ASN ASN A . n A 1 155 CYS 155 488 488 CYS CYS A . n A 1 156 TYR 156 489 489 TYR TYR A . n A 1 157 PHE 157 490 490 PHE PHE A . n A 1 158 PRO 158 491 491 PRO PRO A . n A 1 159 LEU 159 492 492 LEU LEU A . n A 1 160 ARG 160 493 493 ARG ARG A . n A 1 161 SER 161 494 494 SER SER A . n A 1 162 TYR 162 495 495 TYR TYR A . n A 1 163 SER 163 496 496 SER SER A . n A 1 164 PHE 164 497 497 PHE PHE A . n A 1 165 ARG 165 498 498 ARG ARG A . n A 1 166 PRO 166 499 499 PRO PRO A . n A 1 167 THR 167 500 500 THR THR A . n A 1 168 TYR 168 501 501 TYR TYR A . n A 1 169 GLY 169 502 502 GLY GLY A . n A 1 170 VAL 170 503 503 VAL VAL A . n A 1 171 GLY 171 504 504 GLY GLY A . n A 1 172 HIS 172 505 505 HIS HIS A . n A 1 173 GLN 173 506 506 GLN GLN A . n A 1 174 PRO 174 507 507 PRO PRO A . n A 1 175 TYR 175 508 508 TYR TYR A . n A 1 176 ARG 176 509 509 ARG ARG A . n A 1 177 VAL 177 510 510 VAL VAL A . n A 1 178 VAL 178 511 511 VAL VAL A . n A 1 179 VAL 179 512 512 VAL VAL A . n A 1 180 LEU 180 513 513 LEU LEU A . n A 1 181 SER 181 514 514 SER SER A . n A 1 182 PHE 182 515 515 PHE PHE A . n A 1 183 GLU 183 516 516 GLU GLU A . n A 1 184 LEU 184 517 517 LEU LEU A . n A 1 185 LEU 185 518 518 LEU LEU A . n A 1 186 HIS 186 519 519 HIS HIS A . n A 1 187 ALA 187 520 520 ALA ALA A . n A 1 188 PRO 188 521 521 PRO PRO A . n A 1 189 ALA 189 522 522 ALA ALA A . n A 1 190 THR 190 523 523 THR THR A . n A 1 191 VAL 191 524 524 VAL VAL A . n A 1 192 CYS 192 525 525 CYS CYS A . n A 1 193 GLY 193 526 526 GLY GLY A . n B 2 1 GLU 1 1 1 GLU GLU D . n B 2 2 ILE 2 2 2 ILE ILE D . n B 2 3 VAL 3 3 3 VAL VAL D . n B 2 4 LEU 4 4 4 LEU LEU D . n B 2 5 THR 5 5 5 THR THR D . n B 2 6 GLN 6 6 6 GLN GLN D . n B 2 7 SER 7 7 7 SER SER D . n B 2 8 PRO 8 8 8 PRO PRO D . n B 2 9 GLY 9 9 9 GLY GLY D . n B 2 10 THR 10 10 10 THR THR D . n B 2 11 LEU 11 11 11 LEU LEU D . n B 2 12 SER 12 12 12 SER SER D . n B 2 13 LEU 13 13 13 LEU LEU D . n B 2 14 SER 14 14 14 SER SER D . n B 2 15 PRO 15 15 15 PRO PRO D . n B 2 16 GLY 16 16 16 GLY GLY D . n B 2 17 GLU 17 17 17 GLU GLU D . n B 2 18 ARG 18 18 18 ARG ARG D . n B 2 19 ALA 19 19 19 ALA ALA D . n B 2 20 SER 20 20 20 SER SER D . n B 2 21 LEU 21 21 21 LEU LEU D . n B 2 22 SER 22 22 22 SER SER D . n B 2 23 CYS 23 23 23 CYS CYS D . n B 2 24 ARG 24 24 24 ARG ARG D . n B 2 25 ALA 25 25 25 ALA ALA D . n B 2 26 SER 26 26 26 SER SER D . n B 2 27 GLN 27 27 27 GLN GLN D . n B 2 28 SER 28 28 28 SER SER D . n B 2 29 LEU 29 29 29 LEU LEU D . n B 2 30 SER 30 30 30 SER SER D . n B 2 31 THR 31 31 31 THR THR D . n B 2 32 TYR 32 32 32 TYR TYR D . n B 2 33 LEU 33 33 33 LEU LEU D . n B 2 34 ALA 34 34 34 ALA ALA D . n B 2 35 TRP 35 35 35 TRP TRP D . n B 2 36 TYR 36 36 36 TYR TYR D . n B 2 37 GLN 37 37 37 GLN GLN D . n B 2 38 GLN 38 38 38 GLN GLN D . n B 2 39 LYS 39 39 39 LYS LYS D . n B 2 40 PRO 40 40 40 PRO PRO D . n B 2 41 GLY 41 41 41 GLY GLY D . n B 2 42 GLN 42 42 42 GLN GLN D . n B 2 43 ALA 43 43 43 ALA ALA D . n B 2 44 PRO 44 44 44 PRO PRO D . n B 2 45 ARG 45 45 45 ARG ARG D . n B 2 46 LEU 46 46 46 LEU LEU D . n B 2 47 LEU 47 47 47 LEU LEU D . n B 2 48 ILE 48 48 48 ILE ILE D . n B 2 49 PHE 49 49 49 PHE PHE D . n B 2 50 GLY 50 50 50 GLY GLY D . n B 2 51 ALA 51 51 51 ALA ALA D . n B 2 52 SER 52 52 52 SER SER D . n B 2 53 SER 53 53 53 SER SER D . n B 2 54 ARG 54 54 54 ARG ARG D . n B 2 55 ALA 55 55 55 ALA ALA D . n B 2 56 SER 56 56 56 SER SER D . n B 2 57 GLY 57 57 57 GLY GLY D . n B 2 58 ILE 58 58 58 ILE ILE D . n B 2 59 PRO 59 59 59 PRO PRO D . n B 2 60 ASP 60 60 60 ASP ASP D . n B 2 61 ARG 61 61 61 ARG ARG D . n B 2 62 PHE 62 62 62 PHE PHE D . n B 2 63 SER 63 63 63 SER SER D . n B 2 64 GLY 64 64 64 GLY GLY D . n B 2 65 GLY 65 65 65 GLY GLY D . n B 2 66 GLY 66 66 66 GLY GLY D . n B 2 67 SER 67 67 67 SER SER D . n B 2 68 GLY 68 68 68 GLY GLY D . n B 2 69 THR 69 69 69 THR THR D . n B 2 70 ASP 70 70 70 ASP ASP D . n B 2 71 PHE 71 71 71 PHE PHE D . n B 2 72 THR 72 72 72 THR THR D . n B 2 73 LEU 73 73 73 LEU LEU D . n B 2 74 THR 74 74 74 THR THR D . n B 2 75 ILE 75 75 75 ILE ILE D . n B 2 76 SER 76 76 76 SER SER D . n B 2 77 ARG 77 77 77 ARG ARG D . n B 2 78 LEU 78 78 78 LEU LEU D . n B 2 79 GLU 79 79 79 GLU GLU D . n B 2 80 PRO 80 80 80 PRO PRO D . n B 2 81 GLU 81 81 81 GLU GLU D . n B 2 82 ASP 82 82 82 ASP ASP D . n B 2 83 PHE 83 83 83 PHE PHE D . n B 2 84 ALA 84 84 84 ALA ALA D . n B 2 85 VAL 85 85 85 VAL VAL D . n B 2 86 TYR 86 86 86 TYR TYR D . n B 2 87 TYR 87 87 87 TYR TYR D . n B 2 88 CYS 88 88 88 CYS CYS D . n B 2 89 GLN 89 89 89 GLN GLN D . n B 2 90 GLN 90 90 90 GLN GLN D . n B 2 91 TYR 91 91 91 TYR TYR D . n B 2 92 GLY 92 92 92 GLY GLY D . n B 2 93 SER 93 93 93 SER SER D . n B 2 94 SER 94 94 94 SER SER D . n B 2 95 PRO 95 95 95 PRO PRO D . n B 2 96 ARG 96 96 96 ARG ARG D . n B 2 97 THR 97 97 97 THR THR D . n B 2 98 PHE 98 98 98 PHE PHE D . n B 2 99 GLY 99 99 99 GLY GLY D . n B 2 100 GLN 100 100 100 GLN GLN D . n B 2 101 GLY 101 101 101 GLY GLY D . n B 2 102 THR 102 102 102 THR THR D . n B 2 103 LYS 103 103 103 LYS LYS D . n B 2 104 VAL 104 104 104 VAL VAL D . n B 2 105 GLU 105 105 105 GLU GLU D . n B 2 106 ILE 106 106 106 ILE ILE D . n C 3 1 ASP 1 1 1 ASP ASP B . n C 3 2 VAL 2 2 2 VAL VAL B . n C 3 3 HIS 3 3 3 HIS HIS B . n C 3 4 LEU 4 4 4 LEU LEU B . n C 3 5 VAL 5 5 5 VAL VAL B . n C 3 6 GLU 6 6 6 GLU GLU B . n C 3 7 SER 7 7 7 SER SER B . n C 3 8 GLY 8 8 8 GLY GLY B . n C 3 9 GLY 9 9 9 GLY GLY B . n C 3 10 GLY 10 10 10 GLY GLY B . n C 3 11 LEU 11 11 11 LEU LEU B . n C 3 12 ILE 12 12 12 ILE ILE B . n C 3 13 GLN 13 13 13 GLN GLN B . n C 3 14 PRO 14 14 14 PRO PRO B . n C 3 15 GLY 15 15 15 GLY GLY B . n C 3 16 GLY 16 16 16 GLY GLY B . n C 3 17 SER 17 17 17 SER SER B . n C 3 18 LEU 18 18 18 LEU LEU B . n C 3 19 ARG 19 19 19 ARG ARG B . n C 3 20 LEU 20 20 20 LEU LEU B . n C 3 21 SER 21 21 21 SER SER B . n C 3 22 CYS 22 22 22 CYS CYS B . n C 3 23 ALA 23 23 23 ALA ALA B . n C 3 24 ALA 24 24 24 ALA ALA B . n C 3 25 SER 25 25 25 SER SER B . n C 3 26 GLU 26 26 26 GLU GLU B . n C 3 27 PHE 27 27 27 PHE PHE B . n C 3 28 ILE 28 28 28 ILE ILE B . n C 3 29 VAL 29 29 29 VAL VAL B . n C 3 30 SER 30 30 30 SER SER B . n C 3 31 ALA 31 31 31 ALA ALA B . n C 3 32 ASN 32 32 32 ASN ASN B . n C 3 33 TYR 33 33 33 TYR TYR B . n C 3 34 MET 34 34 34 MET MET B . n C 3 35 SER 35 35 35 SER SER B . n C 3 36 TRP 36 36 36 TRP TRP B . n C 3 37 VAL 37 37 37 VAL VAL B . n C 3 38 ARG 38 38 38 ARG ARG B . n C 3 39 GLN 39 39 39 GLN GLN B . n C 3 40 ALA 40 40 40 ALA ALA B . n C 3 41 PRO 41 41 41 PRO PRO B . n C 3 42 GLY 42 42 42 GLY GLY B . n C 3 43 GLU 43 43 43 GLU GLU B . n C 3 44 GLY 44 44 44 GLY GLY B . n C 3 45 LEU 45 45 45 LEU LEU B . n C 3 46 GLN 46 46 46 GLN GLN B . n C 3 47 TRP 47 47 47 TRP TRP B . n C 3 48 VAL 48 48 48 VAL VAL B . n C 3 49 SER 49 49 49 SER SER B . n C 3 50 VAL 50 50 50 VAL VAL B . n C 3 51 ILE 51 51 51 ILE ILE B . n C 3 52 TYR 52 52 52 TYR TYR B . n C 3 53 PRO 53 53 53 PRO PRO B . n C 3 54 GLY 54 54 54 GLY GLY B . n C 3 55 GLY 55 55 55 GLY GLY B . n C 3 56 SER 56 56 56 SER SER B . n C 3 57 THR 57 57 57 THR THR B . n C 3 58 PHE 58 58 58 PHE PHE B . n C 3 59 TYR 59 59 59 TYR TYR B . n C 3 60 ALA 60 60 60 ALA ALA B . n C 3 61 GLU 61 61 61 GLU GLU B . n C 3 62 SER 62 62 62 SER SER B . n C 3 63 VAL 63 63 63 VAL VAL B . n C 3 64 LYS 64 64 64 LYS LYS B . n C 3 65 GLY 65 65 65 GLY GLY B . n C 3 66 ARG 66 66 66 ARG ARG B . n C 3 67 PHE 67 67 67 PHE PHE B . n C 3 68 THR 68 68 68 THR THR B . n C 3 69 ILE 69 69 69 ILE ILE B . n C 3 70 SER 70 70 70 SER SER B . n C 3 71 ARG 71 71 71 ARG ARG B . n C 3 72 ASP 72 72 72 ASP ASP B . n C 3 73 ASN 73 73 73 ASN ASN B . n C 3 74 SER 74 74 74 SER SER B . n C 3 75 ARG 75 75 75 ARG ARG B . n C 3 76 ASN 76 76 76 ASN ASN B . n C 3 77 THR 77 77 77 THR THR B . n C 3 78 LEU 78 78 78 LEU LEU B . n C 3 79 TYR 79 79 79 TYR TYR B . n C 3 80 LEU 80 80 80 LEU LEU B . n C 3 81 GLN 81 81 81 GLN GLN B . n C 3 82 MET 82 82 82 MET MET B . n C 3 83 ASN 83 83 83 ASN ASN B . n C 3 84 SER 84 84 84 SER SER B . n C 3 85 LEU 85 85 85 LEU LEU B . n C 3 86 ARG 86 86 86 ARG ARG B . n C 3 87 ALA 87 87 87 ALA ALA B . n C 3 88 GLU 88 88 88 GLU GLU B . n C 3 89 ASP 89 89 89 ASP ASP B . n C 3 90 THR 90 90 90 THR THR B . n C 3 91 GLY 91 91 91 GLY GLY B . n C 3 92 VAL 92 92 92 VAL VAL B . n C 3 93 TYR 93 93 93 TYR TYR B . n C 3 94 TYR 94 94 94 TYR TYR B . n C 3 95 CYS 95 95 95 CYS CYS B . n C 3 96 ALA 96 96 96 ALA ALA B . n C 3 97 ARG 97 97 97 ARG ARG B . n C 3 98 ASP 98 98 98 ASP ASP B . n C 3 99 TYR 99 99 99 TYR TYR B . n C 3 100 GLY 100 100 100 GLY GLY B . n C 3 101 ASP 101 101 101 ASP ASP B . n C 3 102 PHE 102 102 102 PHE PHE B . n C 3 103 TYR 103 103 103 TYR TYR B . n C 3 104 PHE 104 104 104 PHE PHE B . n C 3 105 ASP 105 105 105 ASP ASP B . n C 3 106 TYR 106 106 106 TYR TYR B . n C 3 107 TRP 107 107 107 TRP TRP B . n C 3 108 GLY 108 108 108 GLY GLY B . n C 3 109 GLN 109 109 109 GLN GLN B . n C 3 110 GLY 110 110 110 GLY GLY B . n C 3 111 THR 111 111 111 THR THR B . n C 3 112 LEU 112 112 112 LEU LEU B . n C 3 113 VAL 113 113 113 VAL VAL B . n C 3 114 THR 114 114 114 THR THR B . n C 3 115 VAL 115 115 115 VAL VAL B . n C 3 116 SER 116 116 116 SER SER B . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8C0Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8C0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8C0Y _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8C0Y _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 3323 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.498 ? 4511 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.565 ? 462 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.042 ? 474 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.007 ? 587 ? f_plane_restr ? ? # _struct.entry_id 8C0Y _struct.title 'SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8C0Y _struct_keywords.text 'Antibody, Spike, Complex, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG ; 334 2 PDB 8C0Y 8C0Y ? 2 ? 1 3 PDB 8C0Y 8C0Y ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8C0Y A 1 ? 193 ? P0DTC2 334 ? 526 ? 334 526 2 2 8C0Y D 1 ? 106 ? 8C0Y 1 ? 106 ? 1 106 3 3 8C0Y B 1 ? 116 ? 8C0Y 1 ? 116 ? 1 116 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8C0Y ASP A 6 ? UNP P0DTC2 GLY 339 variant 339 1 1 8C0Y PRO A 40 ? UNP P0DTC2 SER 373 variant 373 2 1 8C0Y PHE A 42 ? UNP P0DTC2 SER 375 variant 375 3 1 8C0Y ASN A 84 ? UNP P0DTC2 LYS 417 variant 417 4 1 8C0Y LYS A 107 ? UNP P0DTC2 ASN 440 variant 440 5 1 8C0Y SER A 113 ? UNP P0DTC2 GLY 446 variant 446 6 1 8C0Y ASN A 144 ? UNP P0DTC2 SER 477 variant 477 7 1 8C0Y LYS A 145 ? UNP P0DTC2 THR 478 variant 478 8 1 8C0Y ALA A 151 ? UNP P0DTC2 GLU 484 variant 484 9 1 8C0Y ARG A 160 ? UNP P0DTC2 GLN 493 variant 493 10 1 8C0Y SER A 163 ? UNP P0DTC2 GLY 496 variant 496 11 1 8C0Y ARG A 165 ? UNP P0DTC2 GLN 498 variant 498 12 1 8C0Y TYR A 168 ? UNP P0DTC2 ASN 501 variant 501 13 1 8C0Y HIS A 172 ? UNP P0DTC2 TYR 505 variant 505 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 4 ? ASN A 10 ? PRO A 337 ASN A 343 1 ? 7 HELX_P HELX_P2 AA2 SER A 16 ? TRP A 20 ? SER A 349 TRP A 353 5 ? 5 HELX_P HELX_P3 AA3 ASP A 31 ? LEU A 35 ? ASP A 364 LEU A 368 5 ? 5 HELX_P HELX_P4 AA4 SER A 50 ? LEU A 54 ? SER A 383 LEU A 387 5 ? 5 HELX_P HELX_P5 AA5 ASP A 72 ? ILE A 77 ? ASP A 405 ILE A 410 5 ? 6 HELX_P HELX_P6 AA6 GLY A 83 ? ASN A 89 ? GLY A 416 ASN A 422 1 ? 7 HELX_P HELX_P7 AA7 GLU B 79 ? PHE B 83 ? GLU D 79 PHE D 83 5 ? 5 HELX_P HELX_P8 AA8 ILE C 28 ? ASN C 32 ? ILE B 28 ASN B 32 5 ? 5 HELX_P HELX_P9 AA9 ARG C 86 ? THR C 90 ? ARG B 86 THR B 90 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 28 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? A CYS 46 SG ? ? ? 1_555 A CYS 99 SG ? ? A CYS 379 A CYS 432 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 192 SG ? ? A CYS 391 A CYS 525 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf4 disulf ? ? A CYS 147 SG ? ? ? 1_555 A CYS 155 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 88 SG ? ? D CYS 23 D CYS 88 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf6 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 95 SG ? ? B CYS 22 B CYS 95 1_555 ? ? ? ? ? ? ? 2.032 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 94 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 94 _struct_mon_prot_cis.auth_asym_id D _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 95 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 95 _struct_mon_prot_cis.pdbx_auth_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.28 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 4 ? AA6 ? 6 ? AA7 ? 4 ? AA8 ? 6 ? AA9 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA8 5 6 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 21 ? ILE A 25 ? ASN A 354 ILE A 358 AA1 2 ASN A 61 ? ARG A 70 ? ASN A 394 ARG A 403 AA1 3 PRO A 174 ? GLU A 183 ? PRO A 507 GLU A 516 AA1 4 GLY A 98 ? ASN A 104 ? GLY A 431 ASN A 437 AA1 5 PHE A 42 ? TYR A 47 ? PHE A 375 TYR A 380 AA2 1 CYS A 58 ? PHE A 59 ? CYS A 391 PHE A 392 AA2 2 VAL A 191 ? CYS A 192 ? VAL A 524 CYS A 525 AA3 1 LEU A 119 ? ARG A 121 ? LEU A 452 ARG A 454 AA3 2 LEU A 159 ? SER A 161 ? LEU A 492 SER A 494 AA4 1 TYR A 140 ? GLN A 141 ? TYR A 473 GLN A 474 AA4 2 CYS A 155 ? TYR A 156 ? CYS A 488 TYR A 489 AA5 1 LEU B 4 ? GLN B 6 ? LEU D 4 GLN D 6 AA5 2 SER B 20 ? ALA B 25 ? SER D 20 ALA D 25 AA5 3 ASP B 70 ? ILE B 75 ? ASP D 70 ILE D 75 AA5 4 PHE B 62 ? SER B 67 ? PHE D 62 SER D 67 AA6 1 THR B 10 ? SER B 12 ? THR D 10 SER D 12 AA6 2 THR B 102 ? GLU B 105 ? THR D 102 GLU D 105 AA6 3 VAL B 85 ? GLN B 90 ? VAL D 85 GLN D 90 AA6 4 LEU B 33 ? GLN B 38 ? LEU D 33 GLN D 38 AA6 5 ARG B 45 ? PHE B 49 ? ARG D 45 PHE D 49 AA6 6 SER B 53 ? ARG B 54 ? SER D 53 ARG D 54 AA7 1 LEU C 4 ? SER C 7 ? LEU B 4 SER B 7 AA7 2 LEU C 18 ? ALA C 24 ? LEU B 18 ALA B 24 AA7 3 THR C 77 ? MET C 82 ? THR B 77 MET B 82 AA7 4 PHE C 67 ? ASP C 72 ? PHE B 67 ASP B 72 AA8 1 LEU C 11 ? ILE C 12 ? LEU B 11 ILE B 12 AA8 2 THR C 111 ? VAL C 115 ? THR B 111 VAL B 115 AA8 3 GLY C 91 ? ASP C 98 ? GLY B 91 ASP B 98 AA8 4 MET C 34 ? GLN C 39 ? MET B 34 GLN B 39 AA8 5 LEU C 45 ? ILE C 51 ? LEU B 45 ILE B 51 AA8 6 THR C 57 ? TYR C 59 ? THR B 57 TYR B 59 AA9 1 LEU C 11 ? ILE C 12 ? LEU B 11 ILE B 12 AA9 2 THR C 111 ? VAL C 115 ? THR B 111 VAL B 115 AA9 3 GLY C 91 ? ASP C 98 ? GLY B 91 ASP B 98 AA9 4 PHE C 104 ? TRP C 107 ? PHE B 104 TRP B 107 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 23 ? N LYS A 356 O ALA A 64 ? O ALA A 397 AA1 2 3 N ILE A 69 ? N ILE A 402 O TYR A 175 ? O TYR A 508 AA1 3 4 O VAL A 178 ? O VAL A 511 N ILE A 101 ? N ILE A 434 AA1 4 5 O VAL A 100 ? O VAL A 433 N LYS A 45 ? N LYS A 378 AA2 1 2 N PHE A 59 ? N PHE A 392 O VAL A 191 ? O VAL A 524 AA3 1 2 N TYR A 120 ? N TYR A 453 O ARG A 160 ? O ARG A 493 AA4 1 2 N TYR A 140 ? N TYR A 473 O TYR A 156 ? O TYR A 489 AA5 1 2 N THR B 5 ? N THR D 5 O ARG B 24 ? O ARG D 24 AA5 2 3 N CYS B 23 ? N CYS D 23 O PHE B 71 ? O PHE D 71 AA5 3 4 O THR B 74 ? O THR D 74 N SER B 63 ? N SER D 63 AA6 1 2 N LEU B 11 ? N LEU D 11 O GLU B 105 ? O GLU D 105 AA6 2 3 O THR B 102 ? O THR D 102 N TYR B 86 ? N TYR D 86 AA6 3 4 O VAL B 85 ? O VAL D 85 N GLN B 38 ? N GLN D 38 AA6 4 5 N GLN B 37 ? N GLN D 37 O ARG B 45 ? O ARG D 45 AA6 5 6 N PHE B 49 ? N PHE D 49 O SER B 53 ? O SER D 53 AA7 1 2 N SER C 7 ? N SER B 7 O SER C 21 ? O SER B 21 AA7 2 3 N LEU C 20 ? N LEU B 20 O LEU C 80 ? O LEU B 80 AA7 3 4 O GLN C 81 ? O GLN B 81 N THR C 68 ? N THR B 68 AA8 1 2 N ILE C 12 ? N ILE B 12 O THR C 114 ? O THR B 114 AA8 2 3 O VAL C 113 ? O VAL B 113 N GLY C 91 ? N GLY B 91 AA8 3 4 O TYR C 94 ? O TYR B 94 N VAL C 37 ? N VAL B 37 AA8 4 5 N TRP C 36 ? N TRP B 36 O VAL C 48 ? O VAL B 48 AA8 5 6 N VAL C 50 ? N VAL B 50 O PHE C 58 ? O PHE B 58 AA9 1 2 N ILE C 12 ? N ILE B 12 O THR C 114 ? O THR B 114 AA9 2 3 O VAL C 113 ? O VAL B 113 N GLY C 91 ? N GLY B 91 AA9 3 4 N ARG C 97 ? N ARG B 97 O ASP C 105 ? O ASP B 105 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 359 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OD1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASN _pdbx_validate_close_contact.auth_seq_id_2 394 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 343 ? ? -96.58 32.82 2 1 ASN A 481 ? ? 56.44 18.22 3 1 THR A 523 ? ? -141.04 33.22 4 1 ARG D 18 ? ? -176.91 148.12 5 1 ALA D 19 ? ? -174.07 148.06 6 1 ALA D 51 ? ? 72.29 -8.93 7 1 GLU B 26 ? ? 57.42 12.99 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 96 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.079 _pdbx_validate_planes.type 'SIDE CHAIN' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8C0Y _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 142 _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol OTHER # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 7KSG _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 7KSG _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8C0Y _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.68 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 199751 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'SARS-CoV2 Omicron BA.1 Spike in complex with CAB-A17 antibody' ? ? ? '1, 2, 3' 2 1 RECOMBINANT COMPLEX 'SARS-CoV-2 Omicron RBD' ? ? ? 1 3 1 RECOMBINANT COMPLEX 'CAB-A17 Antibody (Fab)' ? ? ? '2, 3' # _em_imaging.entry_id 8C0Y _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 300 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min 300 _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 165000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'ZEMLIN TABLEAU' _em_imaging.c2_aperture_diameter 20 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_vitrification.entry_id 8C0Y _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8C0Y _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 370 ? A ASN 37 2 1 Y 1 A SER 371 ? A SER 38 3 1 Y 1 A ALA 372 ? A ALA 39 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2022-12-19 _em_admin.deposition_site PDBE _em_admin.entry_id 8C0Y _em_admin.last_update 2024-07-03 _em_admin.map_release_date 2024-06-19 _em_admin.title 'SARS-CoV2 Omicron BA.1 RBD in complex with CAB-A17 antibody' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_molwt.entity_assembly_id _em_entity_assembly_molwt.experimental_flag _em_entity_assembly_molwt.id _em_entity_assembly_molwt.units _em_entity_assembly_molwt.value 1 YES 1 MEGADALTONS 0.0846 1 NO 2 MEGADALTONS 0.0957 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 2 2697049 'Severe acute respiratory syndrome coronavirus 2' ? ? ? ? ? ? ? 3 2 10665 'Enterobacteria phage T4' ? ? ? ? ? ? ? 3 3 9606 'Homo sapiens' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 2 9606 'Homo sapiens' ? ? ? 3 2 9606 'Homo sapiens' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 1.5 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 54.6 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 25652 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 10 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 2.7 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? Warp 1.0.7 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot 0.9 OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX 1.19 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 3.3.1 CLASSIFICATION ? 12 1 ? ? cryoSPARC 3.3.1 RECONSTRUCTION ? 13 1 ? ? cryoSPARC 3.3.1 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 1.5 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7KSG _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8C0Y _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_