HEADER PROTEIN BINDING 21-DEC-22 8C1T TITLE CRYSTAL STRUCTURE OF TRICHOPLAX DLG PDZ1 DOMAIN IN COMPLEX WITH TITLE 2 TRICHOPLAX VANGL PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISKS LARGE-LIKE PROTEIN 1; COMPND 3 CHAIN: D, A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VANG-LIKE PROTEIN 1; COMPND 7 CHAIN: E, F, G, H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHOPLAX SP. H2; SOURCE 3 ORGANISM_TAXID: 287889; SOURCE 4 GENE: TRISPH2_000924; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: TRICHOPLAX SP. H2; SOURCE 10 ORGANISM_TAXID: 287889 KEYWDS PDZ DOMAIN, CELL POLARITY, DLG, VANGL, TRICHOPLAX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.C.MADDUMAGE,M.KVANSAKUL REVDAT 1 10-JAN-24 8C1T 0 JRNL AUTH J.C.MADDUMAGE,M.KVANSAKUL JRNL TITL CRYSTAL STRUCTURE OF TRICHOPLAX DLG PDZ1 DOMAIN IN COMPLEX JRNL TITL 2 WITH TRICHOPLAX VANGL PEPTIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 14431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 759 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.3600 - 3.7600 0.99 2752 161 0.1810 0.2093 REMARK 3 2 3.7600 - 2.9900 0.98 2760 144 0.1910 0.2380 REMARK 3 3 2.9900 - 2.6100 0.97 2703 184 0.2345 0.3081 REMARK 3 4 2.6100 - 2.3700 0.97 2752 129 0.2594 0.3565 REMARK 3 5 2.3700 - 2.2000 0.97 2705 141 0.2600 0.3427 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.328 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.031 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2933 REMARK 3 ANGLE : 0.948 3968 REMARK 3 CHIRALITY : 0.059 460 REMARK 3 PLANARITY : 0.006 532 REMARK 3 DIHEDRAL : 12.501 1068 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 12.5942 -9.1808 9.8165 REMARK 3 T TENSOR REMARK 3 T11: 0.1688 T22: 0.1891 REMARK 3 T33: 0.4016 T12: -0.0044 REMARK 3 T13: 0.0396 T23: 0.0425 REMARK 3 L TENSOR REMARK 3 L11: 0.1068 L22: 0.2200 REMARK 3 L33: 0.3330 L12: 0.1111 REMARK 3 L13: -0.0679 L23: -0.1258 REMARK 3 S TENSOR REMARK 3 S11: -0.0160 S12: -0.0006 S13: -0.0230 REMARK 3 S21: -0.0001 S22: -0.0208 S23: -0.0176 REMARK 3 S31: -0.0058 S32: -0.0031 S33: 0.0356 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 1 through 10 or REMARK 3 (resid 11 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 12 REMARK 3 through 23 or (resid 24 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 25 through 30 or (resid 31 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 32 through 50 or REMARK 3 (resid 51 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 52 REMARK 3 through 60 or (resid 61 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 62 through 78 or resid 80 REMARK 3 through 83 or (resid 84 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 85 through 89)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 1 through 10 or REMARK 3 (resid 11 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 12 REMARK 3 through 23 or (resid 24 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 25 through 78 or resid 80 REMARK 3 through 83 or (resid 84 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 85 through 89)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 1 through 23 or REMARK 3 (resid 24 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 25 REMARK 3 through 30 or (resid 31 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 32 through 50 or (resid 51 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 52 through 60 or REMARK 3 (resid 61 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 62 REMARK 3 through 78 or resid 80 through 83 or REMARK 3 (resid 84 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 85 REMARK 3 through 89)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 4 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "D" and (resid 1 through 10 or REMARK 3 (resid 11 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 12 REMARK 3 through 30 or (resid 31 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 32 through 50 or (resid 51 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 52 through 60 or REMARK 3 (resid 61 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 62 REMARK 3 through 89)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "E" and (resid 116 through 122 or REMARK 3 (resid 123 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG1 or REMARK 3 name CG2)))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "F" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "G" and (resid 48 through 54 or REMARK 3 (resid 55 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG1 or REMARK 3 name CG2)))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8C1T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1292127636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14440 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 44.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3RL7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M SODIUM MALONATE DIBASIC REMARK 280 MONOHYDRATE, PH 6.1 , 20% GLUCOSE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY D -4 REMARK 465 PRO D -3 REMARK 465 LEU D -2 REMARK 465 GLY D -1 REMARK 465 ALA D 79 REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 GLY C -4 REMARK 465 PRO C -3 REMARK 465 LEU C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 ASN H 116 REMARK 465 PRO H 117 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN D 24 CG OD1 ND2 REMARK 470 THR D 31 CG2 REMARK 470 VAL D 57 CG1 REMARK 470 VAL D 71 CG2 REMARK 470 LYS D 84 CG CD CE NZ REMARK 470 THR A 31 CG2 REMARK 470 VAL A 57 CG2 REMARK 470 VAL A 71 CG1 REMARK 470 THR B 31 OG1 CG2 REMARK 470 LYS B 51 CG CD CE NZ REMARK 470 VAL B 57 CG1 REMARK 470 ASP B 61 CG OD1 OD2 REMARK 470 VAL B 71 CG2 REMARK 470 SER C 11 OG REMARK 470 THR C 31 CG2 REMARK 470 VAL C 57 CG2 REMARK 470 VAL C 71 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 30 HH TYR A 34 1.50 REMARK 500 OG1 THR A 36 OE2 GLU F 292 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP C 28 CB - CG - OD1 ANGL. DEV. = -12.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN D 1 117.27 -171.57 REMARK 500 ASP D 60 -128.35 50.66 REMARK 500 ASP A 60 -138.93 52.03 REMARK 500 ASN B 24 76.53 -150.63 REMARK 500 PHE B 27 -131.21 50.66 REMARK 500 ASP B 61 16.24 59.90 REMARK 500 PHE C 27 -120.32 60.58 REMARK 500 ASP C 60 -111.38 50.00 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8C1T D 1 89 UNP A0A369SI82_9METZ DBREF2 8C1T D A0A369SI82 155 243 DBREF1 8C1T A 1 89 UNP A0A369SI82_9METZ DBREF2 8C1T A A0A369SI82 155 243 DBREF1 8C1T B 1 89 UNP A0A369SI82_9METZ DBREF2 8C1T B A0A369SI82 155 243 DBREF1 8C1T C 1 89 UNP A0A369SI82_9METZ DBREF2 8C1T C A0A369SI82 155 243 DBREF1 8C1T E 116 123 UNP A0A369S4B9_9METZ DBREF2 8C1T E A0A369S4B9 484 491 DBREF1 8C1T F 288 295 UNP A0A369S4B9_9METZ DBREF2 8C1T F A0A369S4B9 484 491 DBREF1 8C1T G 48 55 UNP A0A369S4B9_9METZ DBREF2 8C1T G A0A369S4B9 484 491 DBREF1 8C1T H 116 123 UNP A0A369S4B9_9METZ DBREF2 8C1T H A0A369S4B9 484 491 SEQADV 8C1T GLY D -4 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T PRO D -3 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T LEU D -2 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY D -1 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T SER D 0 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY A -4 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T PRO A -3 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T LEU A -2 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY A -1 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T SER A 0 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY B -4 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T PRO B -3 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T LEU B -2 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY B -1 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T SER B 0 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY C -4 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T PRO C -3 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T LEU C -2 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T GLY C -1 UNP A0A369SI8 EXPRESSION TAG SEQADV 8C1T SER C 0 UNP A0A369SI8 EXPRESSION TAG SEQRES 1 D 94 GLY PRO LEU GLY SER GLN TYR LEU ASP ILE VAL LEU LEU SEQRES 2 D 94 ARG GLY SER SER GLY LEU GLY PHE SER ILE ALA GLY GLY SEQRES 3 D 94 THR ASP ASN PRO HIS PHE ASP ASN ASP THR SER ILE TYR SEQRES 4 D 94 ILE THR LYS VAL ILE PRO GLY GLY ALA ALA GLU ALA ASP SEQRES 5 D 94 GLY ARG LEU LYS VAL TYR ASP THR ILE VAL ALA VAL ASP SEQRES 6 D 94 ASP GLN LEU MET GLU ASP VAL ALA HIS GLN VAL CYS VAL SEQRES 7 D 94 ASP ALA LEU LYS SER ALA GLY SER GLU VAL LYS LEU ARG SEQRES 8 D 94 VAL LYS ARG SEQRES 1 A 94 GLY PRO LEU GLY SER GLN TYR LEU ASP ILE VAL LEU LEU SEQRES 2 A 94 ARG GLY SER SER GLY LEU GLY PHE SER ILE ALA GLY GLY SEQRES 3 A 94 THR ASP ASN PRO HIS PHE ASP ASN ASP THR SER ILE TYR SEQRES 4 A 94 ILE THR LYS VAL ILE PRO GLY GLY ALA ALA GLU ALA ASP SEQRES 5 A 94 GLY ARG LEU LYS VAL TYR ASP THR ILE VAL ALA VAL ASP SEQRES 6 A 94 ASP GLN LEU MET GLU ASP VAL ALA HIS GLN VAL CYS VAL SEQRES 7 A 94 ASP ALA LEU LYS SER ALA GLY SER GLU VAL LYS LEU ARG SEQRES 8 A 94 VAL LYS ARG SEQRES 1 B 94 GLY PRO LEU GLY SER GLN TYR LEU ASP ILE VAL LEU LEU SEQRES 2 B 94 ARG GLY SER SER GLY LEU GLY PHE SER ILE ALA GLY GLY SEQRES 3 B 94 THR ASP ASN PRO HIS PHE ASP ASN ASP THR SER ILE TYR SEQRES 4 B 94 ILE THR LYS VAL ILE PRO GLY GLY ALA ALA GLU ALA ASP SEQRES 5 B 94 GLY ARG LEU LYS VAL TYR ASP THR ILE VAL ALA VAL ASP SEQRES 6 B 94 ASP GLN LEU MET GLU ASP VAL ALA HIS GLN VAL CYS VAL SEQRES 7 B 94 ASP ALA LEU LYS SER ALA GLY SER GLU VAL LYS LEU ARG SEQRES 8 B 94 VAL LYS ARG SEQRES 1 C 94 GLY PRO LEU GLY SER GLN TYR LEU ASP ILE VAL LEU LEU SEQRES 2 C 94 ARG GLY SER SER GLY LEU GLY PHE SER ILE ALA GLY GLY SEQRES 3 C 94 THR ASP ASN PRO HIS PHE ASP ASN ASP THR SER ILE TYR SEQRES 4 C 94 ILE THR LYS VAL ILE PRO GLY GLY ALA ALA GLU ALA ASP SEQRES 5 C 94 GLY ARG LEU LYS VAL TYR ASP THR ILE VAL ALA VAL ASP SEQRES 6 C 94 ASP GLN LEU MET GLU ASP VAL ALA HIS GLN VAL CYS VAL SEQRES 7 C 94 ASP ALA LEU LYS SER ALA GLY SER GLU VAL LYS LEU ARG SEQRES 8 C 94 VAL LYS ARG SEQRES 1 E 8 ASN PRO ASN PRO GLU THR SER VAL SEQRES 1 F 8 ASN PRO ASN PRO GLU THR SER VAL SEQRES 1 G 8 ASN PRO ASN PRO GLU THR SER VAL SEQRES 1 H 8 ASN PRO ASN PRO GLU THR SER VAL HET MLA B 101 9 HET MLA B 102 9 HET MLA C 101 9 HETNAM MLA MALONIC ACID HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 9 MLA 3(C3 H4 O4) FORMUL 12 HOH *135(H2 O) HELIX 1 AA1 GLY D 42 GLY D 48 1 7 HELIX 2 AA2 ALA D 68 SER D 78 1 11 HELIX 3 AA3 GLY A 42 GLY A 48 1 7 HELIX 4 AA4 ALA A 68 SER A 78 1 11 HELIX 5 AA5 GLY B 42 GLY B 48 1 7 HELIX 6 AA6 ALA B 68 SER B 78 1 11 HELIX 7 AA7 GLY C 42 GLY C 48 1 7 HELIX 8 AA8 ALA C 68 SER C 78 1 11 SHEET 1 AA1 4 TYR D 2 LEU D 8 0 SHEET 2 AA1 4 GLU D 82 LYS D 88 -1 O LEU D 85 N ILE D 5 SHEET 3 AA1 4 THR D 55 VAL D 59 -1 N THR D 55 O LYS D 88 SHEET 4 AA1 4 GLN D 62 LEU D 63 -1 O GLN D 62 N VAL D 59 SHEET 1 AA2 3 ILE D 33 VAL D 38 0 SHEET 2 AA2 3 PHE D 16 GLY D 20 -1 N SER D 17 O THR D 36 SHEET 3 AA2 3 THR E 121 VAL E 123 -1 O VAL E 123 N PHE D 16 SHEET 1 AA3 4 GLN A 1 LEU A 8 0 SHEET 2 AA3 4 GLU A 82 ARG A 89 -1 O LEU A 85 N ILE A 5 SHEET 3 AA3 4 THR A 55 VAL A 59 -1 N VAL A 57 O ARG A 86 SHEET 4 AA3 4 GLN A 62 LEU A 63 -1 O GLN A 62 N VAL A 59 SHEET 1 AA4 3 ILE A 33 VAL A 38 0 SHEET 2 AA4 3 PHE A 16 GLY A 20 -1 N SER A 17 O THR A 36 SHEET 3 AA4 3 THR F 293 SER F 294 -1 O THR F 293 N ILE A 18 SHEET 1 AA5 4 GLN B 1 LEU B 8 0 SHEET 2 AA5 4 GLU B 82 ARG B 89 -1 O LEU B 85 N ILE B 5 SHEET 3 AA5 4 THR B 55 VAL B 59 -1 N VAL B 57 O ARG B 86 SHEET 4 AA5 4 GLN B 62 LEU B 63 -1 O GLN B 62 N VAL B 59 SHEET 1 AA6 3 ILE B 33 VAL B 38 0 SHEET 2 AA6 3 PHE B 16 GLY B 20 -1 N ALA B 19 O TYR B 34 SHEET 3 AA6 3 GLU G 52 SER G 54 -1 O THR G 53 N ILE B 18 SHEET 1 AA7 4 TYR C 2 LEU C 8 0 SHEET 2 AA7 4 GLU C 82 LYS C 88 -1 O LEU C 85 N ILE C 5 SHEET 3 AA7 4 THR C 55 VAL C 59 -1 N VAL C 57 O ARG C 86 SHEET 4 AA7 4 GLN C 62 LEU C 63 -1 O GLN C 62 N VAL C 59 SHEET 1 AA8 3 ILE C 33 VAL C 38 0 SHEET 2 AA8 3 PHE C 16 GLY C 20 -1 N ALA C 19 O TYR C 34 SHEET 3 AA8 3 GLU H 120 SER H 122 -1 O THR H 121 N ILE C 18 CRYST1 34.696 47.953 50.830 85.25 72.08 69.17 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028822 -0.010966 -0.009653 0.00000 SCALE2 0.000000 0.022312 0.000668 0.00000 SCALE3 0.000000 0.000000 0.020686 0.00000 MTRIX1 1 -0.926750 0.214977 0.308090 11.91042 1 MTRIX2 1 -0.034758 0.767506 -0.640099 -9.76434 1 MTRIX3 1 -0.374067 -0.603920 -0.703814 14.98388 1 MTRIX1 2 -0.927877 0.229921 0.293566 29.36127 1 MTRIX2 2 0.010241 -0.771268 0.636428 -8.07453 1 MTRIX3 2 0.372746 0.593533 0.713287 4.30316 1 MTRIX1 3 0.999868 0.016193 0.001424 17.51088 1 MTRIX2 3 0.016151 -0.999536 0.025806 -18.01066 1 MTRIX3 3 0.001841 -0.025780 -0.999666 19.05273 1 MTRIX1 4 0.999829 0.000343 -0.018464 -16.65541 1 MTRIX2 4 0.000675 -0.999838 0.017972 -18.37656 1 MTRIX3 4 -0.018454 -0.017981 -0.999668 20.22610 1 MTRIX1 5 -0.730186 -0.330123 -0.598203 33.08928 1 MTRIX2 5 0.158646 -0.933518 0.321520 -30.00291 1 MTRIX3 5 -0.664575 0.139867 0.734015 27.45925 1