HEADER PROTEIN BINDING 04-JAN-23 8C4J TITLE CDAA-COMPOUND 4 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DAC,CYCLIC-DI-AMP SYNTHASE,C-DI-AMP SYNTHASE,DIADENYLATE COMPND 5 CYCLASE CDAA; COMPND 6 EC: 2.7.7.85; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: NOT TRACEABLE N AND C-TERMINI HAVE NOT BEEN MODELED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: DACA, CDAA, LMO2120; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.NEUMANN,R.FICNER REVDAT 1 07-JUN-23 8C4J 0 JRNL AUTH P.NEUMANN,P.KLOSKOWSKI,R.FICNER JRNL TITL COMPUTER-AIDED DESIGN OF A CYCLIC DI-AMP SYNTHESIZING ENZYME JRNL TITL 2 CDAA INHIBITOR. JRNL REF MICROLIFE V. 4 AD021 2023 JRNL REFN ISSN 2633-6693 JRNL PMID 37223749 JRNL DOI 10.1093/FEMSML/UQAD021 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 30984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9400 - 4.0700 1.00 2854 150 0.1751 0.1828 REMARK 3 2 4.0700 - 3.2300 1.00 2744 145 0.1838 0.2071 REMARK 3 3 3.2300 - 2.8200 1.00 2689 142 0.2316 0.2689 REMARK 3 4 2.8200 - 2.5600 1.00 2666 141 0.2420 0.2710 REMARK 3 5 2.5600 - 2.3800 1.00 2668 141 0.2323 0.2920 REMARK 3 6 2.3800 - 2.2400 1.00 2662 140 0.2426 0.3001 REMARK 3 7 2.2400 - 2.1300 1.00 2621 137 0.2496 0.3153 REMARK 3 8 2.1300 - 2.0300 0.99 2639 139 0.2879 0.3343 REMARK 3 9 2.0300 - 1.9600 1.00 2615 138 0.3328 0.3735 REMARK 3 10 1.9600 - 1.8900 1.00 2654 141 0.3893 0.4288 REMARK 3 11 1.8900 - 1.8300 0.99 2619 139 0.4739 0.5070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.323 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2426 REMARK 3 ANGLE : 0.913 3279 REMARK 3 CHIRALITY : 0.065 395 REMARK 3 PLANARITY : 0.010 418 REMARK 3 DIHEDRAL : 12.850 911 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1367 -1.1819 -4.2903 REMARK 3 T TENSOR REMARK 3 T11: 0.8537 T22: 0.4415 REMARK 3 T33: 0.3838 T12: -0.0564 REMARK 3 T13: -0.0715 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 2.3017 L22: 3.4619 REMARK 3 L33: 2.9443 L12: -0.0429 REMARK 3 L13: 0.3869 L23: 0.1439 REMARK 3 S TENSOR REMARK 3 S11: 0.6211 S12: -0.8084 S13: -0.4347 REMARK 3 S21: 0.8193 S22: -0.2787 S23: 0.0797 REMARK 3 S31: 0.0224 S32: -0.2787 S33: -0.3825 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0514 -1.4080 -16.8215 REMARK 3 T TENSOR REMARK 3 T11: 0.4052 T22: 0.3256 REMARK 3 T33: 0.3635 T12: -0.0330 REMARK 3 T13: -0.0208 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.2478 L22: 6.1500 REMARK 3 L33: 6.5756 L12: -0.8183 REMARK 3 L13: -0.2487 L23: 0.6695 REMARK 3 S TENSOR REMARK 3 S11: -0.0281 S12: 0.0225 S13: -0.0105 REMARK 3 S21: -0.1834 S22: 0.1144 S23: -0.0417 REMARK 3 S31: -0.0844 S32: -0.3502 S33: -0.1129 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2171 4.3507 -19.5653 REMARK 3 T TENSOR REMARK 3 T11: 0.4375 T22: 0.3713 REMARK 3 T33: 0.4048 T12: -0.0092 REMARK 3 T13: 0.0619 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.1336 L22: 8.6362 REMARK 3 L33: 2.0190 L12: 0.2513 REMARK 3 L13: 0.8726 L23: 0.8674 REMARK 3 S TENSOR REMARK 3 S11: -0.2681 S12: -0.0537 S13: -0.0139 REMARK 3 S21: -0.9053 S22: 0.2489 S23: -0.8135 REMARK 3 S31: -0.3690 S32: 0.1544 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2762 11.4176 -14.1055 REMARK 3 T TENSOR REMARK 3 T11: 0.6403 T22: 0.3959 REMARK 3 T33: 0.4543 T12: -0.0168 REMARK 3 T13: -0.0468 T23: -0.0477 REMARK 3 L TENSOR REMARK 3 L11: 3.7800 L22: 4.3782 REMARK 3 L33: 3.6142 L12: 2.1384 REMARK 3 L13: 1.3341 L23: -0.5449 REMARK 3 S TENSOR REMARK 3 S11: -0.1993 S12: 0.0708 S13: 0.2493 REMARK 3 S21: -0.0473 S22: 0.1316 S23: -0.1462 REMARK 3 S31: -0.4910 S32: 0.1571 S33: 0.0972 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 142 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8230 9.4434 -2.8357 REMARK 3 T TENSOR REMARK 3 T11: 0.6518 T22: 0.4733 REMARK 3 T33: 0.5001 T12: -0.0085 REMARK 3 T13: -0.0208 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 2.3022 L22: 6.3898 REMARK 3 L33: 7.6736 L12: -0.0196 REMARK 3 L13: 2.1979 L23: -0.3866 REMARK 3 S TENSOR REMARK 3 S11: -0.0743 S12: -0.3682 S13: 0.7704 REMARK 3 S21: 0.5015 S22: -0.1297 S23: -0.3763 REMARK 3 S31: -0.2601 S32: 0.0203 S33: 0.2484 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1699 -24.0754 -20.9303 REMARK 3 T TENSOR REMARK 3 T11: 0.3556 T22: 0.3070 REMARK 3 T33: 0.3405 T12: -0.0100 REMARK 3 T13: 0.0082 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 8.0177 L22: 8.3235 REMARK 3 L33: 7.2021 L12: 1.3013 REMARK 3 L13: 1.1234 L23: -0.4942 REMARK 3 S TENSOR REMARK 3 S11: -0.0680 S12: -0.0010 S13: -0.0090 REMARK 3 S21: -0.4544 S22: 0.1179 S23: 0.3951 REMARK 3 S31: 0.0680 S32: -0.6007 S33: -0.1086 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 45 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6061 -22.1741 -11.1173 REMARK 3 T TENSOR REMARK 3 T11: 0.3316 T22: 0.3526 REMARK 3 T33: 0.3607 T12: -0.0601 REMARK 3 T13: -0.0637 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.6514 L22: 9.5817 REMARK 3 L33: 4.0594 L12: -1.4356 REMARK 3 L13: -0.2590 L23: -1.5222 REMARK 3 S TENSOR REMARK 3 S11: -0.0467 S12: -0.1736 S13: -0.0001 REMARK 3 S21: 0.7852 S22: 0.1408 S23: -0.4682 REMARK 3 S31: -0.0368 S32: 0.0188 S33: -0.1284 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 102 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1587 -32.5637 -18.4023 REMARK 3 T TENSOR REMARK 3 T11: 0.3999 T22: 0.3349 REMARK 3 T33: 0.3927 T12: -0.0388 REMARK 3 T13: -0.0584 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 3.3946 L22: 6.4450 REMARK 3 L33: 5.7290 L12: 0.0785 REMARK 3 L13: -2.3151 L23: -1.0689 REMARK 3 S TENSOR REMARK 3 S11: 0.0181 S12: 0.0824 S13: -0.1898 REMARK 3 S21: -0.1079 S22: -0.0010 S23: -0.1805 REMARK 3 S31: 0.5011 S32: -0.0219 S33: -0.0418 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8C4J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292127751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-NOV-22 REMARK 200 TEMPERATURE (KELVIN) : 180 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8266 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31111 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 3.12200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.7 M NACL, 0.1M NA-HEPES PH 8.5 AND 3 REMARK 280 % DMSO, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.41000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.84000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.27500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.84000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.41000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.27500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 TYR A 1 REMARK 465 GLY A 2 REMARK 465 VAL A 156 REMARK 465 THR A 157 REMARK 465 ALA A 158 REMARK 465 LYS A 159 REMARK 465 LYS A 160 REMARK 465 PRO A 161 REMARK 465 SER A 162 REMARK 465 ILE A 163 REMARK 465 PHE A 164 REMARK 465 SER A 165 REMARK 465 LYS A 166 REMARK 465 TRP A 167 REMARK 465 LYS A 168 REMARK 465 GLY A 169 REMARK 465 GLY A 170 REMARK 465 LYS A 171 REMARK 465 SER A 172 REMARK 465 GLU A 173 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 TYR B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 ARG B 4 REMARK 465 ALA B 158 REMARK 465 LYS B 159 REMARK 465 LYS B 160 REMARK 465 PRO B 161 REMARK 465 SER B 162 REMARK 465 ILE B 163 REMARK 465 PHE B 164 REMARK 465 SER B 165 REMARK 465 LYS B 166 REMARK 465 TRP B 167 REMARK 465 LYS B 168 REMARK 465 GLY B 169 REMARK 465 GLY B 170 REMARK 465 LYS B 171 REMARK 465 SER B 172 REMARK 465 GLU B 173 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 3 CB OG REMARK 470 THR B 157 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 36 -129.78 -123.31 REMARK 500 ARG B 36 -114.41 -118.52 REMARK 500 REMARK 500 REMARK: NULL DBREF 8C4J A 1 173 UNP Q8Y5E4 DACA_LISMO 101 273 DBREF 8C4J B 1 173 UNP Q8Y5E4 DACA_LISMO 101 273 SEQADV 8C4J GLY A -4 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J PRO A -3 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J LEU A -2 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J GLY A -1 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J SER A 0 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J GLY B -4 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J PRO B -3 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J LEU B -2 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J GLY B -1 UNP Q8Y5E4 EXPRESSION TAG SEQADV 8C4J SER B 0 UNP Q8Y5E4 EXPRESSION TAG SEQRES 1 A 178 GLY PRO LEU GLY SER TYR GLY SER ARG ILE GLU ARG GLU SEQRES 2 A 178 GLN HIS HIS LEU ILE GLU SER ILE GLU LYS SER THR GLN SEQRES 3 A 178 TYR MET ALA LYS ARG ARG ILE GLY ALA LEU ILE SER VAL SEQRES 4 A 178 ALA ARG ASP THR GLY MET ASP ASP TYR ILE GLU THR GLY SEQRES 5 A 178 ILE PRO LEU ASN ALA LYS ILE SER SER GLN LEU LEU ILE SEQRES 6 A 178 ASN ILE PHE ILE PRO ASN THR PRO LEU HIS ASP GLY ALA SEQRES 7 A 178 VAL ILE ILE LYS GLY ASN GLU ILE ALA SER ALA ALA SER SEQRES 8 A 178 TYR LEU PRO LEU SER ASP SER PRO PHE LEU SER LYS GLU SEQRES 9 A 178 LEU GLY THR ARG HIS ARG ALA ALA LEU GLY ILE SER GLU SEQRES 10 A 178 VAL THR ASP SER ILE THR ILE VAL VAL SER GLU GLU THR SEQRES 11 A 178 GLY GLY ILE SER LEU THR LYS GLY GLY GLU LEU PHE ARG SEQRES 12 A 178 ASP VAL SER GLU GLU GLU LEU HIS LYS ILE LEU LEU LYS SEQRES 13 A 178 GLU LEU VAL THR VAL THR ALA LYS LYS PRO SER ILE PHE SEQRES 14 A 178 SER LYS TRP LYS GLY GLY LYS SER GLU SEQRES 1 B 178 GLY PRO LEU GLY SER TYR GLY SER ARG ILE GLU ARG GLU SEQRES 2 B 178 GLN HIS HIS LEU ILE GLU SER ILE GLU LYS SER THR GLN SEQRES 3 B 178 TYR MET ALA LYS ARG ARG ILE GLY ALA LEU ILE SER VAL SEQRES 4 B 178 ALA ARG ASP THR GLY MET ASP ASP TYR ILE GLU THR GLY SEQRES 5 B 178 ILE PRO LEU ASN ALA LYS ILE SER SER GLN LEU LEU ILE SEQRES 6 B 178 ASN ILE PHE ILE PRO ASN THR PRO LEU HIS ASP GLY ALA SEQRES 7 B 178 VAL ILE ILE LYS GLY ASN GLU ILE ALA SER ALA ALA SER SEQRES 8 B 178 TYR LEU PRO LEU SER ASP SER PRO PHE LEU SER LYS GLU SEQRES 9 B 178 LEU GLY THR ARG HIS ARG ALA ALA LEU GLY ILE SER GLU SEQRES 10 B 178 VAL THR ASP SER ILE THR ILE VAL VAL SER GLU GLU THR SEQRES 11 B 178 GLY GLY ILE SER LEU THR LYS GLY GLY GLU LEU PHE ARG SEQRES 12 B 178 ASP VAL SER GLU GLU GLU LEU HIS LYS ILE LEU LEU LYS SEQRES 13 B 178 GLU LEU VAL THR VAL THR ALA LYS LYS PRO SER ILE PHE SEQRES 14 B 178 SER LYS TRP LYS GLY GLY LYS SER GLU HET TI5 A 201 8 HET CL A 202 1 HET TI5 B 201 8 HET CL B 202 1 HET CL B 203 1 HETNAM TI5 5-METHYLPYRIMIDIN-4-AMINE HETNAM CL CHLORIDE ION FORMUL 3 TI5 2(C5 H7 N3) FORMUL 4 CL 3(CL 1-) FORMUL 8 HOH *85(H2 O) HELIX 1 AA1 ARG A 4 ARG A 26 1 23 HELIX 2 AA2 MET A 40 GLU A 45 1 6 HELIX 3 AA3 SER A 55 ILE A 64 1 10 HELIX 4 AA4 GLY A 101 THR A 114 1 14 HELIX 5 AA5 SER A 141 VAL A 154 1 14 HELIX 6 AA6 GLU B 6 ARG B 26 1 21 HELIX 7 AA7 SER B 55 ILE B 64 1 10 HELIX 8 AA8 GLY B 101 THR B 114 1 14 HELIX 9 AA9 SER B 141 VAL B 154 1 14 SHEET 1 AA1 7 ILE A 48 LYS A 53 0 SHEET 2 AA1 7 GLU A 80 SER A 86 -1 O ALA A 84 N ILE A 48 SHEET 3 AA1 7 ALA A 73 LYS A 77 -1 N ALA A 73 O SER A 86 SHEET 4 AA1 7 ALA A 30 VAL A 34 1 N SER A 33 O VAL A 74 SHEET 5 AA1 7 ILE A 117 VAL A 121 -1 O ILE A 117 N VAL A 34 SHEET 6 AA1 7 ILE A 128 LYS A 132 -1 O SER A 129 N VAL A 120 SHEET 7 AA1 7 GLU A 135 PHE A 137 -1 O PHE A 137 N LEU A 130 SHEET 1 AA2 7 ILE B 48 LYS B 53 0 SHEET 2 AA2 7 GLU B 80 SER B 86 -1 O ALA B 84 N ILE B 48 SHEET 3 AA2 7 ALA B 73 LYS B 77 -1 N ALA B 73 O SER B 86 SHEET 4 AA2 7 ALA B 30 VAL B 34 1 N LEU B 31 O VAL B 74 SHEET 5 AA2 7 ILE B 117 VAL B 121 -1 O ILE B 119 N ILE B 32 SHEET 6 AA2 7 ILE B 128 LYS B 132 -1 O SER B 129 N VAL B 120 SHEET 7 AA2 7 GLU B 135 PHE B 137 -1 O PHE B 137 N LEU B 130 CRYST1 40.820 64.550 129.680 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024498 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015492 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007711 0.00000