data_8C4N # _entry.id 8C4N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8C4N pdb_00008c4n 10.2210/pdb8c4n/pdb WWPDB D_1292127753 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8C4N _pdbx_database_status.recvd_initial_deposition_date 2023-01-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Neumann, P.' 1 0000-0003-0129-8112 'Ficner, R.' 2 0000-0002-1739-6086 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Microlife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2633-6693 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 4 _citation.language ? _citation.page_first uqad021 _citation.page_last uqad021 _citation.title 'Computer-aided design of a cyclic di-AMP synthesizing enzyme CdaA inhibitor.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/femsml/uqad021 _citation.pdbx_database_id_PubMed 37223749 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Neumann, P.' 1 0000-0003-0129-8112 primary 'Kloskowski, P.' 2 ? primary 'Ficner, R.' 3 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8C4N _cell.details ? _cell.formula_units_Z ? _cell.length_a 41.610 _cell.length_a_esd ? _cell.length_b 64.720 _cell.length_b_esd ? _cell.length_c 129.920 _cell.length_c_esd ? _cell.volume 349874.456 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8C4N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Diadenylate cyclase' 19369.102 2 2.7.7.85 ? ? ? 2 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 water nat water 18.015 62 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DAC,Cyclic-di-AMP synthase,c-di-AMP synthase,Diadenylate cyclase CdaA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVI IKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDVSEEELHKILLKELVT VTAKKPSIFSKWKGGKSE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVI IKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDVSEEELHKILLKELVT VTAKKPSIFSKWKGGKSE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 TYR n 1 7 GLY n 1 8 SER n 1 9 ARG n 1 10 ILE n 1 11 GLU n 1 12 ARG n 1 13 GLU n 1 14 GLN n 1 15 HIS n 1 16 HIS n 1 17 LEU n 1 18 ILE n 1 19 GLU n 1 20 SER n 1 21 ILE n 1 22 GLU n 1 23 LYS n 1 24 SER n 1 25 THR n 1 26 GLN n 1 27 TYR n 1 28 MET n 1 29 ALA n 1 30 LYS n 1 31 ARG n 1 32 ARG n 1 33 ILE n 1 34 GLY n 1 35 ALA n 1 36 LEU n 1 37 ILE n 1 38 SER n 1 39 VAL n 1 40 ALA n 1 41 ARG n 1 42 ASP n 1 43 THR n 1 44 GLY n 1 45 MET n 1 46 ASP n 1 47 ASP n 1 48 TYR n 1 49 ILE n 1 50 GLU n 1 51 THR n 1 52 GLY n 1 53 ILE n 1 54 PRO n 1 55 LEU n 1 56 ASN n 1 57 ALA n 1 58 LYS n 1 59 ILE n 1 60 SER n 1 61 SER n 1 62 GLN n 1 63 LEU n 1 64 LEU n 1 65 ILE n 1 66 ASN n 1 67 ILE n 1 68 PHE n 1 69 ILE n 1 70 PRO n 1 71 ASN n 1 72 THR n 1 73 PRO n 1 74 LEU n 1 75 HIS n 1 76 ASP n 1 77 GLY n 1 78 ALA n 1 79 VAL n 1 80 ILE n 1 81 ILE n 1 82 LYS n 1 83 GLY n 1 84 ASN n 1 85 GLU n 1 86 ILE n 1 87 ALA n 1 88 SER n 1 89 ALA n 1 90 ALA n 1 91 SER n 1 92 TYR n 1 93 LEU n 1 94 PRO n 1 95 LEU n 1 96 SER n 1 97 ASP n 1 98 SER n 1 99 PRO n 1 100 PHE n 1 101 LEU n 1 102 SER n 1 103 LYS n 1 104 GLU n 1 105 LEU n 1 106 GLY n 1 107 THR n 1 108 ARG n 1 109 HIS n 1 110 ARG n 1 111 ALA n 1 112 ALA n 1 113 LEU n 1 114 GLY n 1 115 ILE n 1 116 SER n 1 117 GLU n 1 118 VAL n 1 119 THR n 1 120 ASP n 1 121 SER n 1 122 ILE n 1 123 THR n 1 124 ILE n 1 125 VAL n 1 126 VAL n 1 127 SER n 1 128 GLU n 1 129 GLU n 1 130 THR n 1 131 GLY n 1 132 GLY n 1 133 ILE n 1 134 SER n 1 135 LEU n 1 136 THR n 1 137 LYS n 1 138 GLY n 1 139 GLY n 1 140 GLU n 1 141 LEU n 1 142 PHE n 1 143 ARG n 1 144 ASP n 1 145 VAL n 1 146 SER n 1 147 GLU n 1 148 GLU n 1 149 GLU n 1 150 LEU n 1 151 HIS n 1 152 LYS n 1 153 ILE n 1 154 LEU n 1 155 LEU n 1 156 LYS n 1 157 GLU n 1 158 LEU n 1 159 VAL n 1 160 THR n 1 161 VAL n 1 162 THR n 1 163 ALA n 1 164 LYS n 1 165 LYS n 1 166 PRO n 1 167 SER n 1 168 ILE n 1 169 PHE n 1 170 SER n 1 171 LYS n 1 172 TRP n 1 173 LYS n 1 174 GLY n 1 175 GLY n 1 176 LYS n 1 177 SER n 1 178 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 178 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dacA, cdaA, lmo2120' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Listeria monocytogenes' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1639 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DACA_LISMO _struct_ref.pdbx_db_accession Q8Y5E4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVIIKGNE IASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDVSEEELHKILLKELVTVTAKK PSIFSKWKGGKSE ; _struct_ref.pdbx_align_begin 101 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8C4N A 6 ? 178 ? Q8Y5E4 101 ? 273 ? 1 173 2 1 8C4N B 6 ? 178 ? Q8Y5E4 101 ? 273 ? 1 173 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8C4N GLY A 1 ? UNP Q8Y5E4 ? ? 'expression tag' -4 1 1 8C4N PRO A 2 ? UNP Q8Y5E4 ? ? 'expression tag' -3 2 1 8C4N LEU A 3 ? UNP Q8Y5E4 ? ? 'expression tag' -2 3 1 8C4N GLY A 4 ? UNP Q8Y5E4 ? ? 'expression tag' -1 4 1 8C4N SER A 5 ? UNP Q8Y5E4 ? ? 'expression tag' 0 5 2 8C4N GLY B 1 ? UNP Q8Y5E4 ? ? 'expression tag' -4 6 2 8C4N PRO B 2 ? UNP Q8Y5E4 ? ? 'expression tag' -3 7 2 8C4N LEU B 3 ? UNP Q8Y5E4 ? ? 'expression tag' -2 8 2 8C4N GLY B 4 ? UNP Q8Y5E4 ? ? 'expression tag' -1 9 2 8C4N SER B 5 ? UNP Q8Y5E4 ? ? 'expression tag' 0 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8C4N _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '3.7 M NaCl, 0.1M Na-HEPES pH 8.5 and 3 % DMSO' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 180 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-10-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97702 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97702 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'P13 (MX1)' _diffrn_source.pdbx_synchrotron_site 'PETRA III, EMBL c/o DESY' # _reflns.B_iso_Wilson_estimate 38.47 _reflns.entry_id 8C4N _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.75 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 68334 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.13 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.054000000000000006 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.9990000000000001 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.75 1.8 ? ? ? ? ? ? 6024 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3.125 ? ? 1 1 0.5760000000000001 ? ? ? ? 2.8930000000000002 ? ? ? ? ? ? ? ? ? 1.80 1.86 ? ? ? ? ? ? 5354 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? ? 2 1 0.705 ? ? ? ? 1.966 ? ? ? ? ? ? ? ? ? 1.86 1.97 ? ? ? ? ? ? 9042 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? ? 3 1 0.855 ? ? ? ? 1.2109999999999999 ? ? ? ? ? ? ? ? ? 1.97 8.0 ? ? ? ? ? ? 47197 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.049 ? ? 4 1 0.9990000000000001 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? ? 8.00 14.0 ? ? ? ? ? ? 585 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.031 ? ? 5 1 0.9990000000000001 ? ? ? ? 0.027999999999999997 ? ? ? ? ? ? ? ? ? 14.00 17.0 ? ? ? ? ? ? 60 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.028999999999999998 ? ? 6 1 0.9990000000000001 ? ? ? ? 0.026000000000000002 ? ? ? ? ? ? ? ? ? 17.00 50.0 ? ? ? ? ? ? 72 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 0.037000000000000005 ? ? 7 1 0.998 ? ? ? ? 0.033 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 58.78 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8C4N _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.75 _refine.ls_d_res_low 45.85 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 68209 _refine.ls_number_reflns_R_free 3422 _refine.ls_number_reflns_R_work 64787 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.82 _refine.ls_percent_reflns_R_free 5.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2232 _refine.ls_R_factor_R_free 0.2546 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2215 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.31 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 38.4753 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2657 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 45.85 _refine_hist.number_atoms_solvent 62 _refine_hist.number_atoms_total 2566 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2455 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0067 ? 2556 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8999 ? 3463 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0612 ? 415 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0070 ? 432 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 7.4532 ? 360 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.75 1.78 . . 141 2633 99.53 . . . . 0.5147 . . . . . . . . . . . 0.5327 'X-RAY DIFFRACTION' 1.78 1.80 . . 144 2764 99.73 . . . . 0.4988 . . . . . . . . . . . 0.5213 'X-RAY DIFFRACTION' 1.80 1.83 . . 137 2633 99.86 . . . . 0.4625 . . . . . . . . . . . 0.4483 'X-RAY DIFFRACTION' 1.83 1.86 . . 146 2727 99.79 . . . . 0.4546 . . . . . . . . . . . 0.4828 'X-RAY DIFFRACTION' 1.86 1.89 . . 145 2713 99.69 . . . . 0.4281 . . . . . . . . . . . 0.4479 'X-RAY DIFFRACTION' 1.89 1.93 . . 142 2668 99.93 . . . . 0.4144 . . . . . . . . . . . 0.4597 'X-RAY DIFFRACTION' 1.93 1.96 . . 144 2731 99.83 . . . . 0.3781 . . . . . . . . . . . 0.3767 'X-RAY DIFFRACTION' 1.96 2.00 . . 137 2673 99.68 . . . . 0.3489 . . . . . . . . . . . 0.3425 'X-RAY DIFFRACTION' 2.00 2.05 . . 139 2713 99.86 . . . . 0.2940 . . . . . . . . . . . 0.3283 'X-RAY DIFFRACTION' 2.05 2.09 . . 143 2738 99.93 . . . . 0.2775 . . . . . . . . . . . 0.3494 'X-RAY DIFFRACTION' 2.09 2.15 . . 141 2676 100.00 . . . . 0.2561 . . . . . . . . . . . 0.3454 'X-RAY DIFFRACTION' 2.15 2.20 . . 147 2727 99.69 . . . . 0.2493 . . . . . . . . . . . 0.3093 'X-RAY DIFFRACTION' 2.20 2.27 . . 140 2664 99.64 . . . . 0.2346 . . . . . . . . . . . 0.2620 'X-RAY DIFFRACTION' 2.27 2.34 . . 141 2721 99.72 . . . . 0.2433 . . . . . . . . . . . 0.2856 'X-RAY DIFFRACTION' 2.34 2.43 . . 136 2709 99.89 . . . . 0.2266 . . . . . . . . . . . 0.2800 'X-RAY DIFFRACTION' 2.43 2.52 . . 144 2660 99.89 . . . . 0.2289 . . . . . . . . . . . 0.3004 'X-RAY DIFFRACTION' 2.52 2.64 . . 144 2737 99.97 . . . . 0.2448 . . . . . . . . . . . 0.2956 'X-RAY DIFFRACTION' 2.64 2.78 . . 147 2704 99.96 . . . . 0.2462 . . . . . . . . . . . 0.2674 'X-RAY DIFFRACTION' 2.78 2.95 . . 143 2717 99.93 . . . . 0.2531 . . . . . . . . . . . 0.3657 'X-RAY DIFFRACTION' 2.95 3.18 . . 139 2677 99.89 . . . . 0.2280 . . . . . . . . . . . 0.2912 'X-RAY DIFFRACTION' 3.18 3.50 . . 150 2715 99.97 . . . . 0.2075 . . . . . . . . . . . 0.1894 'X-RAY DIFFRACTION' 3.50 4.01 . . 138 2682 99.82 . . . . 0.1838 . . . . . . . . . . . 0.2149 'X-RAY DIFFRACTION' 4.01 5.05 . . 149 2711 99.86 . . . . 0.1586 . . . . . . . . . . . 0.1839 'X-RAY DIFFRACTION' 5.05 45.85 . . 145 2694 99.82 . . . . 0.1914 . . . . . . . . . . . 0.2099 # _struct.entry_id 8C4N _struct.title 'CdaA-AMP complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8C4N _struct_keywords.text 'Complex, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 9 ? ARG A 31 ? ARG A 4 ARG A 26 1 ? 23 HELX_P HELX_P2 AA2 MET A 45 ? GLU A 50 ? MET A 40 GLU A 45 1 ? 6 HELX_P HELX_P3 AA3 SER A 60 ? ILE A 69 ? SER A 55 ILE A 64 1 ? 10 HELX_P HELX_P4 AA4 GLY A 106 ? THR A 119 ? GLY A 101 THR A 114 1 ? 14 HELX_P HELX_P5 AA5 SER A 146 ? VAL A 159 ? SER A 141 VAL A 154 1 ? 14 HELX_P HELX_P6 AA6 ILE B 10 ? ARG B 31 ? ILE B 5 ARG B 26 1 ? 22 HELX_P HELX_P7 AA7 MET B 45 ? ILE B 49 ? MET B 40 ILE B 44 5 ? 5 HELX_P HELX_P8 AA8 SER B 60 ? PHE B 68 ? SER B 55 PHE B 63 1 ? 9 HELX_P HELX_P9 AA9 GLY B 106 ? GLU B 117 ? GLY B 101 GLU B 112 1 ? 12 HELX_P HELX_P10 AB1 SER B 146 ? VAL B 159 ? SER B 141 VAL B 154 1 ? 14 HELX_P HELX_P11 AB2 THR B 160 ? LYS B 164 ? THR B 155 LYS B 159 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 56 O ? ? ? 1_555 D NA . NA ? ? A ASN 51 A NA 202 1_555 ? ? ? ? ? ? ? 2.709 ? ? metalc2 metalc ? ? D NA . NA ? ? ? 1_555 B ASN 56 O ? ? A NA 202 B ASN 51 1_555 ? ? ? ? ? ? ? 2.505 ? ? metalc3 metalc ? ? D NA . NA ? ? ? 1_555 I HOH . O ? ? A NA 202 B HOH 323 1_555 ? ? ? ? ? ? ? 2.913 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 53 ? LYS A 58 ? ILE A 48 LYS A 53 AA1 2 GLU A 85 ? SER A 91 ? GLU A 80 SER A 86 AA1 3 ALA A 78 ? LYS A 82 ? ALA A 73 LYS A 77 AA1 4 ALA A 35 ? VAL A 39 ? ALA A 30 VAL A 34 AA1 5 ILE A 122 ? VAL A 126 ? ILE A 117 VAL A 121 AA1 6 ILE A 133 ? LYS A 137 ? ILE A 128 LYS A 132 AA1 7 GLU A 140 ? PHE A 142 ? GLU A 135 PHE A 137 AA2 1 ILE B 53 ? LYS B 58 ? ILE B 48 LYS B 53 AA2 2 GLU B 85 ? SER B 91 ? GLU B 80 SER B 86 AA2 3 ALA B 78 ? LYS B 82 ? ALA B 73 LYS B 77 AA2 4 ALA B 35 ? VAL B 39 ? ALA B 30 VAL B 34 AA2 5 ILE B 122 ? VAL B 126 ? ILE B 117 VAL B 121 AA2 6 ILE B 133 ? LYS B 137 ? ILE B 128 LYS B 132 AA2 7 GLU B 140 ? PHE B 142 ? GLU B 135 PHE B 137 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 53 ? N ILE A 48 O ALA A 89 ? O ALA A 84 AA1 2 3 O SER A 91 ? O SER A 86 N ALA A 78 ? N ALA A 73 AA1 3 4 O VAL A 79 ? O VAL A 74 N SER A 38 ? N SER A 33 AA1 4 5 N VAL A 39 ? N VAL A 34 O ILE A 122 ? O ILE A 117 AA1 5 6 N VAL A 125 ? N VAL A 120 O SER A 134 ? O SER A 129 AA1 6 7 N LEU A 135 ? N LEU A 130 O PHE A 142 ? O PHE A 137 AA2 1 2 N ILE B 53 ? N ILE B 48 O ALA B 89 ? O ALA B 84 AA2 2 3 O SER B 91 ? O SER B 86 N ALA B 78 ? N ALA B 73 AA2 3 4 O VAL B 79 ? O VAL B 74 N SER B 38 ? N SER B 33 AA2 4 5 N VAL B 39 ? N VAL B 34 O ILE B 122 ? O ILE B 117 AA2 5 6 N VAL B 125 ? N VAL B 120 O SER B 134 ? O SER B 129 AA2 6 7 N LEU B 135 ? N LEU B 130 O PHE B 142 ? O PHE B 137 # _atom_sites.entry_id 8C4N _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.024033 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015451 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007697 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 LEU 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 TYR 6 1 ? ? ? A . n A 1 7 GLY 7 2 ? ? ? A . n A 1 8 SER 8 3 ? ? ? A . n A 1 9 ARG 9 4 4 ARG ARG A . n A 1 10 ILE 10 5 5 ILE ILE A . n A 1 11 GLU 11 6 6 GLU GLU A . n A 1 12 ARG 12 7 7 ARG ARG A . n A 1 13 GLU 13 8 8 GLU GLU A . n A 1 14 GLN 14 9 9 GLN GLN A . n A 1 15 HIS 15 10 10 HIS HIS A . n A 1 16 HIS 16 11 11 HIS HIS A . n A 1 17 LEU 17 12 12 LEU LEU A . n A 1 18 ILE 18 13 13 ILE ILE A . n A 1 19 GLU 19 14 14 GLU GLU A . n A 1 20 SER 20 15 15 SER SER A . n A 1 21 ILE 21 16 16 ILE ILE A . n A 1 22 GLU 22 17 17 GLU GLU A . n A 1 23 LYS 23 18 18 LYS LYS A . n A 1 24 SER 24 19 19 SER SER A . n A 1 25 THR 25 20 20 THR THR A . n A 1 26 GLN 26 21 21 GLN GLN A . n A 1 27 TYR 27 22 22 TYR TYR A . n A 1 28 MET 28 23 23 MET MET A . n A 1 29 ALA 29 24 24 ALA ALA A . n A 1 30 LYS 30 25 25 LYS LYS A . n A 1 31 ARG 31 26 26 ARG ARG A . n A 1 32 ARG 32 27 27 ARG ARG A . n A 1 33 ILE 33 28 28 ILE ILE A . n A 1 34 GLY 34 29 29 GLY GLY A . n A 1 35 ALA 35 30 30 ALA ALA A . n A 1 36 LEU 36 31 31 LEU LEU A . n A 1 37 ILE 37 32 32 ILE ILE A . n A 1 38 SER 38 33 33 SER SER A . n A 1 39 VAL 39 34 34 VAL VAL A . n A 1 40 ALA 40 35 35 ALA ALA A . n A 1 41 ARG 41 36 36 ARG ARG A . n A 1 42 ASP 42 37 37 ASP ASP A . n A 1 43 THR 43 38 38 THR THR A . n A 1 44 GLY 44 39 39 GLY GLY A . n A 1 45 MET 45 40 40 MET MET A . n A 1 46 ASP 46 41 41 ASP ASP A . n A 1 47 ASP 47 42 42 ASP ASP A . n A 1 48 TYR 48 43 43 TYR TYR A . n A 1 49 ILE 49 44 44 ILE ILE A . n A 1 50 GLU 50 45 45 GLU GLU A . n A 1 51 THR 51 46 46 THR THR A . n A 1 52 GLY 52 47 47 GLY GLY A . n A 1 53 ILE 53 48 48 ILE ILE A . n A 1 54 PRO 54 49 49 PRO PRO A . n A 1 55 LEU 55 50 50 LEU LEU A . n A 1 56 ASN 56 51 51 ASN ASN A . n A 1 57 ALA 57 52 52 ALA ALA A . n A 1 58 LYS 58 53 53 LYS LYS A . n A 1 59 ILE 59 54 54 ILE ILE A . n A 1 60 SER 60 55 55 SER SER A . n A 1 61 SER 61 56 56 SER SER A . n A 1 62 GLN 62 57 57 GLN GLN A . n A 1 63 LEU 63 58 58 LEU LEU A . n A 1 64 LEU 64 59 59 LEU LEU A . n A 1 65 ILE 65 60 60 ILE ILE A . n A 1 66 ASN 66 61 61 ASN ASN A . n A 1 67 ILE 67 62 62 ILE ILE A . n A 1 68 PHE 68 63 63 PHE PHE A . n A 1 69 ILE 69 64 64 ILE ILE A . n A 1 70 PRO 70 65 65 PRO PRO A . n A 1 71 ASN 71 66 66 ASN ASN A . n A 1 72 THR 72 67 67 THR THR A . n A 1 73 PRO 73 68 68 PRO PRO A . n A 1 74 LEU 74 69 69 LEU LEU A . n A 1 75 HIS 75 70 70 HIS HIS A . n A 1 76 ASP 76 71 71 ASP ASP A . n A 1 77 GLY 77 72 72 GLY GLY A . n A 1 78 ALA 78 73 73 ALA ALA A . n A 1 79 VAL 79 74 74 VAL VAL A . n A 1 80 ILE 80 75 75 ILE ILE A . n A 1 81 ILE 81 76 76 ILE ILE A . n A 1 82 LYS 82 77 77 LYS LYS A . n A 1 83 GLY 83 78 78 GLY GLY A . n A 1 84 ASN 84 79 79 ASN ASN A . n A 1 85 GLU 85 80 80 GLU GLU A . n A 1 86 ILE 86 81 81 ILE ILE A . n A 1 87 ALA 87 82 82 ALA ALA A . n A 1 88 SER 88 83 83 SER SER A . n A 1 89 ALA 89 84 84 ALA ALA A . n A 1 90 ALA 90 85 85 ALA ALA A . n A 1 91 SER 91 86 86 SER SER A . n A 1 92 TYR 92 87 87 TYR TYR A . n A 1 93 LEU 93 88 88 LEU LEU A . n A 1 94 PRO 94 89 89 PRO PRO A . n A 1 95 LEU 95 90 90 LEU LEU A . n A 1 96 SER 96 91 91 SER SER A . n A 1 97 ASP 97 92 92 ASP ASP A . n A 1 98 SER 98 93 93 SER SER A . n A 1 99 PRO 99 94 94 PRO PRO A . n A 1 100 PHE 100 95 95 PHE PHE A . n A 1 101 LEU 101 96 96 LEU LEU A . n A 1 102 SER 102 97 97 SER SER A . n A 1 103 LYS 103 98 98 LYS LYS A . n A 1 104 GLU 104 99 99 GLU GLU A . n A 1 105 LEU 105 100 100 LEU LEU A . n A 1 106 GLY 106 101 101 GLY GLY A . n A 1 107 THR 107 102 102 THR THR A . n A 1 108 ARG 108 103 103 ARG ARG A . n A 1 109 HIS 109 104 104 HIS HIS A . n A 1 110 ARG 110 105 105 ARG ARG A . n A 1 111 ALA 111 106 106 ALA ALA A . n A 1 112 ALA 112 107 107 ALA ALA A . n A 1 113 LEU 113 108 108 LEU LEU A . n A 1 114 GLY 114 109 109 GLY GLY A . n A 1 115 ILE 115 110 110 ILE ILE A . n A 1 116 SER 116 111 111 SER SER A . n A 1 117 GLU 117 112 112 GLU GLU A . n A 1 118 VAL 118 113 113 VAL VAL A . n A 1 119 THR 119 114 114 THR THR A . n A 1 120 ASP 120 115 115 ASP ASP A . n A 1 121 SER 121 116 116 SER SER A . n A 1 122 ILE 122 117 117 ILE ILE A . n A 1 123 THR 123 118 118 THR THR A . n A 1 124 ILE 124 119 119 ILE ILE A . n A 1 125 VAL 125 120 120 VAL VAL A . n A 1 126 VAL 126 121 121 VAL VAL A . n A 1 127 SER 127 122 122 SER SER A . n A 1 128 GLU 128 123 123 GLU GLU A . n A 1 129 GLU 129 124 124 GLU GLU A . n A 1 130 THR 130 125 125 THR THR A . n A 1 131 GLY 131 126 126 GLY GLY A . n A 1 132 GLY 132 127 127 GLY GLY A . n A 1 133 ILE 133 128 128 ILE ILE A . n A 1 134 SER 134 129 129 SER SER A . n A 1 135 LEU 135 130 130 LEU LEU A . n A 1 136 THR 136 131 131 THR THR A . n A 1 137 LYS 137 132 132 LYS LYS A . n A 1 138 GLY 138 133 133 GLY GLY A . n A 1 139 GLY 139 134 134 GLY GLY A . n A 1 140 GLU 140 135 135 GLU GLU A . n A 1 141 LEU 141 136 136 LEU LEU A . n A 1 142 PHE 142 137 137 PHE PHE A . n A 1 143 ARG 143 138 138 ARG ARG A . n A 1 144 ASP 144 139 139 ASP ASP A . n A 1 145 VAL 145 140 140 VAL VAL A . n A 1 146 SER 146 141 141 SER SER A . n A 1 147 GLU 147 142 142 GLU GLU A . n A 1 148 GLU 148 143 143 GLU GLU A . n A 1 149 GLU 149 144 144 GLU GLU A . n A 1 150 LEU 150 145 145 LEU LEU A . n A 1 151 HIS 151 146 146 HIS HIS A . n A 1 152 LYS 152 147 147 LYS LYS A . n A 1 153 ILE 153 148 148 ILE ILE A . n A 1 154 LEU 154 149 149 LEU LEU A . n A 1 155 LEU 155 150 150 LEU LEU A . n A 1 156 LYS 156 151 151 LYS LYS A . n A 1 157 GLU 157 152 152 GLU GLU A . n A 1 158 LEU 158 153 153 LEU LEU A . n A 1 159 VAL 159 154 154 VAL VAL A . n A 1 160 THR 160 155 155 THR THR A . n A 1 161 VAL 161 156 ? ? ? A . n A 1 162 THR 162 157 ? ? ? A . n A 1 163 ALA 163 158 ? ? ? A . n A 1 164 LYS 164 159 ? ? ? A . n A 1 165 LYS 165 160 ? ? ? A . n A 1 166 PRO 166 161 ? ? ? A . n A 1 167 SER 167 162 ? ? ? A . n A 1 168 ILE 168 163 ? ? ? A . n A 1 169 PHE 169 164 ? ? ? A . n A 1 170 SER 170 165 ? ? ? A . n A 1 171 LYS 171 166 ? ? ? A . n A 1 172 TRP 172 167 ? ? ? A . n A 1 173 LYS 173 168 ? ? ? A . n A 1 174 GLY 174 169 ? ? ? A . n A 1 175 GLY 175 170 ? ? ? A . n A 1 176 LYS 176 171 ? ? ? A . n A 1 177 SER 177 172 ? ? ? A . n A 1 178 GLU 178 173 ? ? ? A . n B 1 1 GLY 1 -4 ? ? ? B . n B 1 2 PRO 2 -3 ? ? ? B . n B 1 3 LEU 3 -2 ? ? ? B . n B 1 4 GLY 4 -1 ? ? ? B . n B 1 5 SER 5 0 ? ? ? B . n B 1 6 TYR 6 1 ? ? ? B . n B 1 7 GLY 7 2 ? ? ? B . n B 1 8 SER 8 3 3 SER SER B . n B 1 9 ARG 9 4 4 ARG ARG B . n B 1 10 ILE 10 5 5 ILE ILE B . n B 1 11 GLU 11 6 6 GLU GLU B . n B 1 12 ARG 12 7 7 ARG ARG B . n B 1 13 GLU 13 8 8 GLU GLU B . n B 1 14 GLN 14 9 9 GLN GLN B . n B 1 15 HIS 15 10 10 HIS HIS B . n B 1 16 HIS 16 11 11 HIS HIS B . n B 1 17 LEU 17 12 12 LEU LEU B . n B 1 18 ILE 18 13 13 ILE ILE B . n B 1 19 GLU 19 14 14 GLU GLU B . n B 1 20 SER 20 15 15 SER SER B . n B 1 21 ILE 21 16 16 ILE ILE B . n B 1 22 GLU 22 17 17 GLU GLU B . n B 1 23 LYS 23 18 18 LYS LYS B . n B 1 24 SER 24 19 19 SER SER B . n B 1 25 THR 25 20 20 THR THR B . n B 1 26 GLN 26 21 21 GLN GLN B . n B 1 27 TYR 27 22 22 TYR TYR B . n B 1 28 MET 28 23 23 MET MET B . n B 1 29 ALA 29 24 24 ALA ALA B . n B 1 30 LYS 30 25 25 LYS LYS B . n B 1 31 ARG 31 26 26 ARG ARG B . n B 1 32 ARG 32 27 27 ARG ARG B . n B 1 33 ILE 33 28 28 ILE ILE B . n B 1 34 GLY 34 29 29 GLY GLY B . n B 1 35 ALA 35 30 30 ALA ALA B . n B 1 36 LEU 36 31 31 LEU LEU B . n B 1 37 ILE 37 32 32 ILE ILE B . n B 1 38 SER 38 33 33 SER SER B . n B 1 39 VAL 39 34 34 VAL VAL B . n B 1 40 ALA 40 35 35 ALA ALA B . n B 1 41 ARG 41 36 36 ARG ARG B . n B 1 42 ASP 42 37 37 ASP ASP B . n B 1 43 THR 43 38 38 THR THR B . n B 1 44 GLY 44 39 39 GLY GLY B . n B 1 45 MET 45 40 40 MET MET B . n B 1 46 ASP 46 41 41 ASP ASP B . n B 1 47 ASP 47 42 42 ASP ASP B . n B 1 48 TYR 48 43 43 TYR TYR B . n B 1 49 ILE 49 44 44 ILE ILE B . n B 1 50 GLU 50 45 45 GLU GLU B . n B 1 51 THR 51 46 46 THR THR B . n B 1 52 GLY 52 47 47 GLY GLY B . n B 1 53 ILE 53 48 48 ILE ILE B . n B 1 54 PRO 54 49 49 PRO PRO B . n B 1 55 LEU 55 50 50 LEU LEU B . n B 1 56 ASN 56 51 51 ASN ASN B . n B 1 57 ALA 57 52 52 ALA ALA B . n B 1 58 LYS 58 53 53 LYS LYS B . n B 1 59 ILE 59 54 54 ILE ILE B . n B 1 60 SER 60 55 55 SER SER B . n B 1 61 SER 61 56 56 SER SER B . n B 1 62 GLN 62 57 57 GLN GLN B . n B 1 63 LEU 63 58 58 LEU LEU B . n B 1 64 LEU 64 59 59 LEU LEU B . n B 1 65 ILE 65 60 60 ILE ILE B . n B 1 66 ASN 66 61 61 ASN ASN B . n B 1 67 ILE 67 62 62 ILE ILE B . n B 1 68 PHE 68 63 63 PHE PHE B . n B 1 69 ILE 69 64 64 ILE ILE B . n B 1 70 PRO 70 65 65 PRO PRO B . n B 1 71 ASN 71 66 66 ASN ASN B . n B 1 72 THR 72 67 67 THR THR B . n B 1 73 PRO 73 68 68 PRO PRO B . n B 1 74 LEU 74 69 69 LEU LEU B . n B 1 75 HIS 75 70 70 HIS HIS B . n B 1 76 ASP 76 71 71 ASP ASP B . n B 1 77 GLY 77 72 72 GLY GLY B . n B 1 78 ALA 78 73 73 ALA ALA B . n B 1 79 VAL 79 74 74 VAL VAL B . n B 1 80 ILE 80 75 75 ILE ILE B . n B 1 81 ILE 81 76 76 ILE ILE B . n B 1 82 LYS 82 77 77 LYS LYS B . n B 1 83 GLY 83 78 78 GLY GLY B . n B 1 84 ASN 84 79 79 ASN ASN B . n B 1 85 GLU 85 80 80 GLU GLU B . n B 1 86 ILE 86 81 81 ILE ILE B . n B 1 87 ALA 87 82 82 ALA ALA B . n B 1 88 SER 88 83 83 SER SER B . n B 1 89 ALA 89 84 84 ALA ALA B . n B 1 90 ALA 90 85 85 ALA ALA B . n B 1 91 SER 91 86 86 SER SER B . n B 1 92 TYR 92 87 87 TYR TYR B . n B 1 93 LEU 93 88 88 LEU LEU B . n B 1 94 PRO 94 89 89 PRO PRO B . n B 1 95 LEU 95 90 90 LEU LEU B . n B 1 96 SER 96 91 91 SER SER B . n B 1 97 ASP 97 92 92 ASP ASP B . n B 1 98 SER 98 93 93 SER SER B . n B 1 99 PRO 99 94 94 PRO PRO B . n B 1 100 PHE 100 95 95 PHE PHE B . n B 1 101 LEU 101 96 96 LEU LEU B . n B 1 102 SER 102 97 97 SER SER B . n B 1 103 LYS 103 98 98 LYS LYS B . n B 1 104 GLU 104 99 99 GLU GLU B . n B 1 105 LEU 105 100 100 LEU LEU B . n B 1 106 GLY 106 101 101 GLY GLY B . n B 1 107 THR 107 102 102 THR THR B . n B 1 108 ARG 108 103 103 ARG ARG B . n B 1 109 HIS 109 104 104 HIS HIS B . n B 1 110 ARG 110 105 105 ARG ARG B . n B 1 111 ALA 111 106 106 ALA ALA B . n B 1 112 ALA 112 107 107 ALA ALA B . n B 1 113 LEU 113 108 108 LEU LEU B . n B 1 114 GLY 114 109 109 GLY GLY B . n B 1 115 ILE 115 110 110 ILE ILE B . n B 1 116 SER 116 111 111 SER SER B . n B 1 117 GLU 117 112 112 GLU GLU B . n B 1 118 VAL 118 113 113 VAL VAL B . n B 1 119 THR 119 114 114 THR THR B . n B 1 120 ASP 120 115 115 ASP ASP B . n B 1 121 SER 121 116 116 SER SER B . n B 1 122 ILE 122 117 117 ILE ILE B . n B 1 123 THR 123 118 118 THR THR B . n B 1 124 ILE 124 119 119 ILE ILE B . n B 1 125 VAL 125 120 120 VAL VAL B . n B 1 126 VAL 126 121 121 VAL VAL B . n B 1 127 SER 127 122 122 SER SER B . n B 1 128 GLU 128 123 123 GLU GLU B . n B 1 129 GLU 129 124 124 GLU GLU B . n B 1 130 THR 130 125 125 THR THR B . n B 1 131 GLY 131 126 126 GLY GLY B . n B 1 132 GLY 132 127 127 GLY GLY B . n B 1 133 ILE 133 128 128 ILE ILE B . n B 1 134 SER 134 129 129 SER SER B . n B 1 135 LEU 135 130 130 LEU LEU B . n B 1 136 THR 136 131 131 THR THR B . n B 1 137 LYS 137 132 132 LYS LYS B . n B 1 138 GLY 138 133 133 GLY GLY B . n B 1 139 GLY 139 134 134 GLY GLY B . n B 1 140 GLU 140 135 135 GLU GLU B . n B 1 141 LEU 141 136 136 LEU LEU B . n B 1 142 PHE 142 137 137 PHE PHE B . n B 1 143 ARG 143 138 138 ARG ARG B . n B 1 144 ASP 144 139 139 ASP ASP B . n B 1 145 VAL 145 140 140 VAL VAL B . n B 1 146 SER 146 141 141 SER SER B . n B 1 147 GLU 147 142 142 GLU GLU B . n B 1 148 GLU 148 143 143 GLU GLU B . n B 1 149 GLU 149 144 144 GLU GLU B . n B 1 150 LEU 150 145 145 LEU LEU B . n B 1 151 HIS 151 146 146 HIS HIS B . n B 1 152 LYS 152 147 147 LYS LYS B . n B 1 153 ILE 153 148 148 ILE ILE B . n B 1 154 LEU 154 149 149 LEU LEU B . n B 1 155 LEU 155 150 150 LEU LEU B . n B 1 156 LYS 156 151 151 LYS LYS B . n B 1 157 GLU 157 152 152 GLU GLU B . n B 1 158 LEU 158 153 153 LEU LEU B . n B 1 159 VAL 159 154 154 VAL VAL B . n B 1 160 THR 160 155 155 THR THR B . n B 1 161 VAL 161 156 156 VAL VAL B . n B 1 162 THR 162 157 157 THR THR B . n B 1 163 ALA 163 158 158 ALA ALA B . n B 1 164 LYS 164 159 159 LYS LYS B . n B 1 165 LYS 165 160 160 LYS LYS B . n B 1 166 PRO 166 161 161 PRO PRO B . n B 1 167 SER 167 162 162 SER SER B . n B 1 168 ILE 168 163 163 ILE ILE B . n B 1 169 PHE 169 164 164 PHE PHE B . n B 1 170 SER 170 165 165 SER SER B . n B 1 171 LYS 171 166 166 LYS LYS B . n B 1 172 TRP 172 167 167 TRP TRP B . n B 1 173 LYS 173 168 168 LYS LYS B . n B 1 174 GLY 174 169 ? ? ? B . n B 1 175 GLY 175 170 ? ? ? B . n B 1 176 LYS 176 171 ? ? ? B . n B 1 177 SER 177 172 ? ? ? B . n B 1 178 GLU 178 173 ? ? ? B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email rficner@gwdg.de _pdbx_contact_author.name_first Ralf _pdbx_contact_author.name_last FIcner _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1739-6086 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMP 1 201 201 AMP AMP A . D 3 NA 1 202 1 NA NA A . E 2 AMP 1 201 201 AMP AMP B . F 4 CL 1 202 3 CL CL B . G 4 CL 1 203 4 CL CL B . H 5 HOH 1 301 25 HOH HOH A . H 5 HOH 2 302 10 HOH HOH A . H 5 HOH 3 303 37 HOH HOH A . H 5 HOH 4 304 23 HOH HOH A . H 5 HOH 5 305 5 HOH HOH A . H 5 HOH 6 306 6 HOH HOH A . H 5 HOH 7 307 14 HOH HOH A . H 5 HOH 8 308 2 HOH HOH A . H 5 HOH 9 309 45 HOH HOH A . H 5 HOH 10 310 48 HOH HOH A . H 5 HOH 11 311 18 HOH HOH A . H 5 HOH 12 312 58 HOH HOH A . H 5 HOH 13 313 19 HOH HOH A . H 5 HOH 14 314 11 HOH HOH A . H 5 HOH 15 315 60 HOH HOH A . H 5 HOH 16 316 46 HOH HOH A . H 5 HOH 17 317 62 HOH HOH A . H 5 HOH 18 318 53 HOH HOH A . H 5 HOH 19 319 24 HOH HOH A . H 5 HOH 20 320 36 HOH HOH A . H 5 HOH 21 321 51 HOH HOH A . H 5 HOH 22 322 50 HOH HOH A . H 5 HOH 23 323 21 HOH HOH A . H 5 HOH 24 324 9 HOH HOH A . H 5 HOH 25 325 13 HOH HOH A . H 5 HOH 26 326 49 HOH HOH A . H 5 HOH 27 327 40 HOH HOH A . H 5 HOH 28 328 56 HOH HOH A . H 5 HOH 29 329 7 HOH HOH A . H 5 HOH 30 330 33 HOH HOH A . H 5 HOH 31 331 57 HOH HOH A . H 5 HOH 32 332 54 HOH HOH A . I 5 HOH 1 301 26 HOH HOH B . I 5 HOH 2 302 16 HOH HOH B . I 5 HOH 3 303 43 HOH HOH B . I 5 HOH 4 304 20 HOH HOH B . I 5 HOH 5 305 29 HOH HOH B . I 5 HOH 6 306 1 HOH HOH B . I 5 HOH 7 307 4 HOH HOH B . I 5 HOH 8 308 8 HOH HOH B . I 5 HOH 9 309 30 HOH HOH B . I 5 HOH 10 310 3 HOH HOH B . I 5 HOH 11 311 28 HOH HOH B . I 5 HOH 12 312 32 HOH HOH B . I 5 HOH 13 313 39 HOH HOH B . I 5 HOH 14 314 61 HOH HOH B . I 5 HOH 15 315 47 HOH HOH B . I 5 HOH 16 316 35 HOH HOH B . I 5 HOH 17 317 22 HOH HOH B . I 5 HOH 18 318 44 HOH HOH B . I 5 HOH 19 319 38 HOH HOH B . I 5 HOH 20 320 55 HOH HOH B . I 5 HOH 21 321 34 HOH HOH B . I 5 HOH 22 322 31 HOH HOH B . I 5 HOH 23 323 15 HOH HOH B . I 5 HOH 24 324 27 HOH HOH B . I 5 HOH 25 325 12 HOH HOH B . I 5 HOH 26 326 42 HOH HOH B . I 5 HOH 27 327 59 HOH HOH B . I 5 HOH 28 328 17 HOH HOH B . I 5 HOH 29 329 41 HOH HOH B . I 5 HOH 30 330 52 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,H 2 1 B,E,F,G,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASN 56 ? A ASN 51 ? 1_555 NA ? D NA . ? A NA 202 ? 1_555 O ? B ASN 56 ? B ASN 51 ? 1_555 74.7 ? 2 O ? A ASN 56 ? A ASN 51 ? 1_555 NA ? D NA . ? A NA 202 ? 1_555 O ? I HOH . ? B HOH 323 ? 1_555 66.3 ? 3 O ? B ASN 56 ? B ASN 51 ? 1_555 NA ? D NA . ? A NA 202 ? 1_555 O ? I HOH . ? B HOH 323 ? 1_555 68.4 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-06-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1-4487 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_entry_details.entry_id 8C4N _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 36 ? ? -132.14 -133.93 2 1 ARG B 36 ? ? -121.14 -134.24 3 1 SER B 165 ? ? -79.08 22.85 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A LEU -2 ? A LEU 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A TYR 1 ? A TYR 6 7 1 Y 1 A GLY 2 ? A GLY 7 8 1 Y 1 A SER 3 ? A SER 8 9 1 Y 1 A VAL 156 ? A VAL 161 10 1 Y 1 A THR 157 ? A THR 162 11 1 Y 1 A ALA 158 ? A ALA 163 12 1 Y 1 A LYS 159 ? A LYS 164 13 1 Y 1 A LYS 160 ? A LYS 165 14 1 Y 1 A PRO 161 ? A PRO 166 15 1 Y 1 A SER 162 ? A SER 167 16 1 Y 1 A ILE 163 ? A ILE 168 17 1 Y 1 A PHE 164 ? A PHE 169 18 1 Y 1 A SER 165 ? A SER 170 19 1 Y 1 A LYS 166 ? A LYS 171 20 1 Y 1 A TRP 167 ? A TRP 172 21 1 Y 1 A LYS 168 ? A LYS 173 22 1 Y 1 A GLY 169 ? A GLY 174 23 1 Y 1 A GLY 170 ? A GLY 175 24 1 Y 1 A LYS 171 ? A LYS 176 25 1 Y 1 A SER 172 ? A SER 177 26 1 Y 1 A GLU 173 ? A GLU 178 27 1 Y 1 B GLY -4 ? B GLY 1 28 1 Y 1 B PRO -3 ? B PRO 2 29 1 Y 1 B LEU -2 ? B LEU 3 30 1 Y 1 B GLY -1 ? B GLY 4 31 1 Y 1 B SER 0 ? B SER 5 32 1 Y 1 B TYR 1 ? B TYR 6 33 1 Y 1 B GLY 2 ? B GLY 7 34 1 Y 1 B GLY 169 ? B GLY 174 35 1 Y 1 B GLY 170 ? B GLY 175 36 1 Y 1 B LYS 171 ? B LYS 176 37 1 Y 1 B SER 172 ? B SER 177 38 1 Y 1 B GLU 173 ? B GLU 178 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'German Research Foundation (DFG)' Germany SPP1879 1 'German Research Foundation (DFG)' Germany SFB860 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id AMP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id AMP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ADENOSINE MONOPHOSPHATE' AMP 3 'SODIUM ION' NA 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6hvl _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 #