data_8C78 # _entry.id 8C78 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8C78 pdb_00008c78 10.2210/pdb8c78/pdb WWPDB D_1292127933 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8C78 _pdbx_database_status.recvd_initial_deposition_date 2023-01-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Le Bihan, Y.-V.' 1 0000-0002-6850-9706 'van Montfort, R.L.M.' 2 0000-0002-5688-3450 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 66 _citation.language ? _citation.page_first 5892 _citation.page_last 5906 _citation.title 'Discovery of an In Vivo Chemical Probe for BCL6 Inhibition by Optimization of Tricyclic Quinolinones.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.3c00155 _citation.pdbx_database_id_PubMed 37026591 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Harnden, A.C.' 1 0000-0002-4092-705X primary 'Davis, O.A.' 2 ? primary 'Box, G.M.' 3 ? primary 'Hayes, A.' 4 ? primary 'Johnson, L.D.' 5 ? primary 'Henley, A.T.' 6 ? primary 'de Haven Brandon, A.K.' 7 ? primary 'Valenti, M.' 8 ? primary 'Cheung, K.J.' 9 ? primary 'Brennan, A.' 10 ? primary 'Huckvale, R.' 11 ? primary 'Pierrat, O.A.' 12 ? primary 'Talbot, R.' 13 ? primary 'Bright, M.D.' 14 ? primary 'Akpinar, H.A.' 15 ? primary 'Miller, D.S.J.' 16 ? primary 'Tarantino, D.' 17 ? primary 'Gowan, S.' 18 ? primary 'de Klerk, S.' 19 ? primary 'McAndrew, P.C.' 20 0000-0002-1366-088X primary 'Le Bihan, Y.V.' 21 0000-0002-6850-9706 primary 'Meniconi, M.' 22 ? primary 'Burke, R.' 23 ? primary 'Kirkin, V.' 24 ? primary 'van Montfort, R.L.M.' 25 ? primary 'Raynaud, F.I.' 26 0000-0003-0957-6279 primary 'Rossanese, O.W.' 27 ? primary 'Bellenie, B.R.' 28 0000-0001-9987-3079 primary 'Hoelder, S.' 29 0000-0001-8636-1488 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8C78 _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.588 _cell.length_a_esd ? _cell.length_b 67.588 _cell.length_b_esd ? _cell.length_c 167.162 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8C78 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-cell lymphoma 6 protein' 16498.953 1 ? ? ? ? 2 non-polymer syn ;(2~{S})-10-[(3-chloranyl-2-fluoranyl-pyridin-4-yl)amino]-2-cyclopropyl-3,3-bis(fluoranyl)-7-methyl-2,4-dihydro-1~{H}-[1,4]oxazepino[2,3-c]quinolin-6-one ; 450.841 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 water nat water 18.015 150 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6,B-cell lymphoma 5 protein,BCL-5,Protein LAZ-3,Zinc finger and BTB domain-containing protein 27,Zinc finger protein 51' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGLDYKDDDDKENLYFQGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQL KCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGLDYKDDDDKENLYFQGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQL KCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 LEU n 1 5 ASP n 1 6 TYR n 1 7 LYS n 1 8 ASP n 1 9 ASP n 1 10 ASP n 1 11 ASP n 1 12 LYS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 ALA n 1 21 ASP n 1 22 SER n 1 23 CYS n 1 24 ILE n 1 25 GLN n 1 26 PHE n 1 27 THR n 1 28 ARG n 1 29 HIS n 1 30 ALA n 1 31 SER n 1 32 ASP n 1 33 VAL n 1 34 LEU n 1 35 LEU n 1 36 ASN n 1 37 LEU n 1 38 ASN n 1 39 ARG n 1 40 LEU n 1 41 ARG n 1 42 SER n 1 43 ARG n 1 44 ASP n 1 45 ILE n 1 46 LEU n 1 47 THR n 1 48 ASP n 1 49 VAL n 1 50 VAL n 1 51 ILE n 1 52 VAL n 1 53 VAL n 1 54 SER n 1 55 ARG n 1 56 GLU n 1 57 GLN n 1 58 PHE n 1 59 ARG n 1 60 ALA n 1 61 HIS n 1 62 LYS n 1 63 THR n 1 64 VAL n 1 65 LEU n 1 66 MET n 1 67 ALA n 1 68 CYS n 1 69 SER n 1 70 GLY n 1 71 LEU n 1 72 PHE n 1 73 TYR n 1 74 SER n 1 75 ILE n 1 76 PHE n 1 77 THR n 1 78 ASP n 1 79 GLN n 1 80 LEU n 1 81 LYS n 1 82 CYS n 1 83 ASN n 1 84 LEU n 1 85 SER n 1 86 VAL n 1 87 ILE n 1 88 ASN n 1 89 LEU n 1 90 ASP n 1 91 PRO n 1 92 GLU n 1 93 ILE n 1 94 ASN n 1 95 PRO n 1 96 GLU n 1 97 GLY n 1 98 PHE n 1 99 CYS n 1 100 ILE n 1 101 LEU n 1 102 LEU n 1 103 ASP n 1 104 PHE n 1 105 MET n 1 106 TYR n 1 107 THR n 1 108 SER n 1 109 ARG n 1 110 LEU n 1 111 ASN n 1 112 LEU n 1 113 ARG n 1 114 GLU n 1 115 GLY n 1 116 ASN n 1 117 ILE n 1 118 MET n 1 119 ALA n 1 120 VAL n 1 121 MET n 1 122 ALA n 1 123 THR n 1 124 ALA n 1 125 MET n 1 126 TYR n 1 127 LEU n 1 128 GLN n 1 129 MET n 1 130 GLU n 1 131 HIS n 1 132 VAL n 1 133 VAL n 1 134 ASP n 1 135 THR n 1 136 CYS n 1 137 ARG n 1 138 LYS n 1 139 PHE n 1 140 ILE n 1 141 LYS n 1 142 ALA n 1 143 SER n 1 144 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 144 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCL6, BCL5, LAZ3, ZBTB27, ZNF51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant AI _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET48b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BCL6_HUMAN _struct_ref.pdbx_db_accession P41182 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFC ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; _struct_ref.pdbx_align_begin 5 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8C78 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 144 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P41182 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8C78 GLY A 1 ? UNP P41182 ? ? 'expression tag' -14 1 1 8C78 PRO A 2 ? UNP P41182 ? ? 'expression tag' -13 2 1 8C78 GLY A 3 ? UNP P41182 ? ? 'expression tag' -12 3 1 8C78 LEU A 4 ? UNP P41182 ? ? 'expression tag' -11 4 1 8C78 ASP A 5 ? UNP P41182 ? ? 'expression tag' -10 5 1 8C78 TYR A 6 ? UNP P41182 ? ? 'expression tag' -9 6 1 8C78 LYS A 7 ? UNP P41182 ? ? 'expression tag' -8 7 1 8C78 ASP A 8 ? UNP P41182 ? ? 'expression tag' -7 8 1 8C78 ASP A 9 ? UNP P41182 ? ? 'expression tag' -6 9 1 8C78 ASP A 10 ? UNP P41182 ? ? 'expression tag' -5 10 1 8C78 ASP A 11 ? UNP P41182 ? ? 'expression tag' -4 11 1 8C78 LYS A 12 ? UNP P41182 ? ? 'expression tag' -3 12 1 8C78 GLU A 13 ? UNP P41182 ? ? 'expression tag' -2 13 1 8C78 ASN A 14 ? UNP P41182 ? ? 'expression tag' -1 14 1 8C78 LEU A 15 ? UNP P41182 ? ? 'expression tag' 0 15 1 8C78 TYR A 16 ? UNP P41182 ? ? 'expression tag' 1 16 1 8C78 PHE A 17 ? UNP P41182 ? ? 'expression tag' 2 17 1 8C78 GLN A 18 ? UNP P41182 ? ? 'expression tag' 3 18 1 8C78 GLY A 19 ? UNP P41182 ? ? 'expression tag' 4 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TWI non-polymer . ;(2~{S})-10-[(3-chloranyl-2-fluoranyl-pyridin-4-yl)amino]-2-cyclopropyl-3,3-bis(fluoranyl)-7-methyl-2,4-dihydro-1~{H}-[1,4]oxazepino[2,3-c]quinolin-6-one ; ? 'C21 H18 Cl F3 N4 O2' 450.841 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8C78 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.34 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 63.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1.5 microliter of BCL6-BTB at 10 mg/mL plus 1.5 microliter of a crystallisation solution consisting of 0.1 M Tris pH 7.5 and 0.80 M Na/K Tartrate, against 300 microliter of crystallisation solution. ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 XE 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-05-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 40.390 _reflns.entry_id 8C78 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 47.950 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21872 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 25.400 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 786 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.076 _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 554891 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.988 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.800 1.840 ? ? 35432 ? ? ? 1262 ? ? ? ? ? ? ? ? ? ? ? 28.100 ? ? 1.200 2.637 0.494 ? 1 1 0.725 ? ? 99.700 ? 2.590 ? ? ? ? ? ? ? ? ? 9.000 47.950 ? ? 5150 ? ? ? 243 ? ? ? ? ? ? ? ? ? ? ? 21.200 ? ? 122.800 0.023 0.006 ? 2 1 0.938 ? ? 99.500 ? 0.022 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] -2.3520 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -2.3520 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 4.7040 _refine.B_iso_max 91.340 _refine.B_iso_mean 44.7300 _refine.B_iso_min 28.220 _refine.correlation_coeff_Fo_to_Fc 0.9510 _refine.correlation_coeff_Fo_to_Fc_free 0.9500 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8C78 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8000 _refine.ls_d_res_low 47.9500 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21793 _refine.ls_number_reflns_R_free 1034 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_percent_reflns_R_free 4.7400 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2004 _refine.ls_R_factor_R_free 0.2321 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1988 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.1010 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.1090 _refine.pdbx_overall_SU_R_Blow_DPI 0.1110 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.0990 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 8C78 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.220 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.8000 _refine_hist.d_res_low 47.9500 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 1226 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 130 _refine_hist.pdbx_B_iso_mean_ligand 45.86 _refine_hist.pdbx_B_iso_mean_solvent 59.52 _refine_hist.pdbx_number_atoms_protein 1023 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 412 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 223 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1155 ? t_it 10.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 152 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 12 ? t_sum_occupancies 1.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1150 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.008 ? 1155 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.900 ? 1574 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.250 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 15.320 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.8000 _refine_ls_shell.d_res_low 1.8100 _refine_ls_shell.number_reflns_all 436 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.number_reflns_R_work 412 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free 5.5000 _refine_ls_shell.R_factor_all 0.2724 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2725 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 51 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2697 # _struct.entry_id 8C78 _struct.title 'Crystal structure of human BCL6 BTB domain in complex with compound CCT374705' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8C78 _struct_keywords.text 'Inhibitor, Cancer, Lymphoma, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 28 ? ARG A 43 ? ARG A 13 ARG A 28 1 ? 16 HELX_P HELX_P2 AA2 HIS A 61 ? CYS A 68 ? HIS A 46 CYS A 53 1 ? 8 HELX_P HELX_P3 AA3 SER A 69 ? THR A 77 ? SER A 54 THR A 62 1 ? 9 HELX_P HELX_P4 AA4 LEU A 80 ? LEU A 84 ? LEU A 65 LEU A 69 5 ? 5 HELX_P HELX_P5 AA5 ASN A 94 ? SER A 108 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P6 AA6 ASN A 116 ? GLN A 128 ? ASN A 101 GLN A 113 1 ? 13 HELX_P HELX_P7 AA7 MET A 129 ? GLU A 144 ? MET A 114 GLU A 129 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 16 ? GLN A 18 ? TYR A 1 GLN A 3 AA1 2 ILE A 24 ? PHE A 26 ? ILE A 9 PHE A 11 AA2 1 GLU A 56 ? ALA A 60 ? GLU A 41 ALA A 45 AA2 2 VAL A 49 ? VAL A 53 ? VAL A 34 VAL A 38 AA2 3 VAL A 86 ? ASN A 88 ? VAL A 71 ASN A 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 17 ? N PHE A 2 O GLN A 25 ? O GLN A 10 AA2 1 2 O GLU A 56 ? O GLU A 41 N VAL A 53 ? N VAL A 38 AA2 2 3 N VAL A 52 ? N VAL A 37 O ILE A 87 ? O ILE A 72 # _atom_sites.entry_id 8C78 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014796 _atom_sites.fract_transf_matrix[1][2] 0.008542 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017084 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005982 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -14 ? ? ? A . n A 1 2 PRO 2 -13 ? ? ? A . n A 1 3 GLY 3 -12 ? ? ? A . n A 1 4 LEU 4 -11 ? ? ? A . n A 1 5 ASP 5 -10 ? ? ? A . n A 1 6 TYR 6 -9 ? ? ? A . n A 1 7 LYS 7 -8 ? ? ? A . n A 1 8 ASP 8 -7 ? ? ? A . n A 1 9 ASP 9 -6 ? ? ? A . n A 1 10 ASP 10 -5 ? ? ? A . n A 1 11 ASP 11 -4 ? ? ? A . n A 1 12 LYS 12 -3 ? ? ? A . n A 1 13 GLU 13 -2 ? ? ? A . n A 1 14 ASN 14 -1 ? ? ? A . n A 1 15 LEU 15 0 0 LEU LEU A . n A 1 16 TYR 16 1 1 TYR TYR A . n A 1 17 PHE 17 2 2 PHE PHE A . n A 1 18 GLN 18 3 3 GLN GLN A . n A 1 19 GLY 19 4 4 GLY GLY A . n A 1 20 ALA 20 5 5 ALA ALA A . n A 1 21 ASP 21 6 6 ASP ASP A . n A 1 22 SER 22 7 7 SER SER A . n A 1 23 CYS 23 8 8 CYS CYS A . n A 1 24 ILE 24 9 9 ILE ILE A . n A 1 25 GLN 25 10 10 GLN GLN A . n A 1 26 PHE 26 11 11 PHE PHE A . n A 1 27 THR 27 12 12 THR THR A . n A 1 28 ARG 28 13 13 ARG ARG A . n A 1 29 HIS 29 14 14 HIS HIS A . n A 1 30 ALA 30 15 15 ALA ALA A . n A 1 31 SER 31 16 16 SER SER A . n A 1 32 ASP 32 17 17 ASP ASP A . n A 1 33 VAL 33 18 18 VAL VAL A . n A 1 34 LEU 34 19 19 LEU LEU A . n A 1 35 LEU 35 20 20 LEU LEU A . n A 1 36 ASN 36 21 21 ASN ASN A . n A 1 37 LEU 37 22 22 LEU LEU A . n A 1 38 ASN 38 23 23 ASN ASN A . n A 1 39 ARG 39 24 24 ARG ARG A . n A 1 40 LEU 40 25 25 LEU LEU A . n A 1 41 ARG 41 26 26 ARG ARG A . n A 1 42 SER 42 27 27 SER SER A . n A 1 43 ARG 43 28 28 ARG ARG A . n A 1 44 ASP 44 29 29 ASP ASP A . n A 1 45 ILE 45 30 30 ILE ILE A . n A 1 46 LEU 46 31 31 LEU LEU A . n A 1 47 THR 47 32 32 THR THR A . n A 1 48 ASP 48 33 33 ASP ASP A . n A 1 49 VAL 49 34 34 VAL VAL A . n A 1 50 VAL 50 35 35 VAL VAL A . n A 1 51 ILE 51 36 36 ILE ILE A . n A 1 52 VAL 52 37 37 VAL VAL A . n A 1 53 VAL 53 38 38 VAL VAL A . n A 1 54 SER 54 39 39 SER SER A . n A 1 55 ARG 55 40 40 ARG ARG A . n A 1 56 GLU 56 41 41 GLU GLU A . n A 1 57 GLN 57 42 42 GLN GLN A . n A 1 58 PHE 58 43 43 PHE PHE A . n A 1 59 ARG 59 44 44 ARG ARG A . n A 1 60 ALA 60 45 45 ALA ALA A . n A 1 61 HIS 61 46 46 HIS HIS A . n A 1 62 LYS 62 47 47 LYS LYS A . n A 1 63 THR 63 48 48 THR THR A . n A 1 64 VAL 64 49 49 VAL VAL A . n A 1 65 LEU 65 50 50 LEU LEU A . n A 1 66 MET 66 51 51 MET MET A . n A 1 67 ALA 67 52 52 ALA ALA A . n A 1 68 CYS 68 53 53 CYS CYS A . n A 1 69 SER 69 54 54 SER SER A . n A 1 70 GLY 70 55 55 GLY GLY A . n A 1 71 LEU 71 56 56 LEU LEU A . n A 1 72 PHE 72 57 57 PHE PHE A . n A 1 73 TYR 73 58 58 TYR TYR A . n A 1 74 SER 74 59 59 SER SER A . n A 1 75 ILE 75 60 60 ILE ILE A . n A 1 76 PHE 76 61 61 PHE PHE A . n A 1 77 THR 77 62 62 THR THR A . n A 1 78 ASP 78 63 63 ASP ASP A . n A 1 79 GLN 79 64 64 GLN GLN A . n A 1 80 LEU 80 65 65 LEU LEU A . n A 1 81 LYS 81 66 66 LYS LYS A . n A 1 82 CYS 82 67 67 CYS CYS A . n A 1 83 ASN 83 68 68 ASN ASN A . n A 1 84 LEU 84 69 69 LEU LEU A . n A 1 85 SER 85 70 70 SER SER A . n A 1 86 VAL 86 71 71 VAL VAL A . n A 1 87 ILE 87 72 72 ILE ILE A . n A 1 88 ASN 88 73 73 ASN ASN A . n A 1 89 LEU 89 74 74 LEU LEU A . n A 1 90 ASP 90 75 75 ASP ASP A . n A 1 91 PRO 91 76 76 PRO PRO A . n A 1 92 GLU 92 77 77 GLU GLU A . n A 1 93 ILE 93 78 78 ILE ILE A . n A 1 94 ASN 94 79 79 ASN ASN A . n A 1 95 PRO 95 80 80 PRO PRO A . n A 1 96 GLU 96 81 81 GLU GLU A . n A 1 97 GLY 97 82 82 GLY GLY A . n A 1 98 PHE 98 83 83 PHE PHE A . n A 1 99 CYS 99 84 84 CYS CYS A . n A 1 100 ILE 100 85 85 ILE ILE A . n A 1 101 LEU 101 86 86 LEU LEU A . n A 1 102 LEU 102 87 87 LEU LEU A . n A 1 103 ASP 103 88 88 ASP ASP A . n A 1 104 PHE 104 89 89 PHE PHE A . n A 1 105 MET 105 90 90 MET MET A . n A 1 106 TYR 106 91 91 TYR TYR A . n A 1 107 THR 107 92 92 THR THR A . n A 1 108 SER 108 93 93 SER SER A . n A 1 109 ARG 109 94 94 ARG ARG A . n A 1 110 LEU 110 95 95 LEU LEU A . n A 1 111 ASN 111 96 96 ASN ASN A . n A 1 112 LEU 112 97 97 LEU LEU A . n A 1 113 ARG 113 98 98 ARG ARG A . n A 1 114 GLU 114 99 99 GLU GLU A . n A 1 115 GLY 115 100 100 GLY GLY A . n A 1 116 ASN 116 101 101 ASN ASN A . n A 1 117 ILE 117 102 102 ILE ILE A . n A 1 118 MET 118 103 103 MET MET A . n A 1 119 ALA 119 104 104 ALA ALA A . n A 1 120 VAL 120 105 105 VAL VAL A . n A 1 121 MET 121 106 106 MET MET A . n A 1 122 ALA 122 107 107 ALA ALA A . n A 1 123 THR 123 108 108 THR THR A . n A 1 124 ALA 124 109 109 ALA ALA A . n A 1 125 MET 125 110 110 MET MET A . n A 1 126 TYR 126 111 111 TYR TYR A . n A 1 127 LEU 127 112 112 LEU LEU A . n A 1 128 GLN 128 113 113 GLN GLN A . n A 1 129 MET 129 114 114 MET MET A . n A 1 130 GLU 130 115 115 GLU GLU A . n A 1 131 HIS 131 116 116 HIS HIS A . n A 1 132 VAL 132 117 117 VAL VAL A . n A 1 133 VAL 133 118 118 VAL VAL A . n A 1 134 ASP 134 119 119 ASP ASP A . n A 1 135 THR 135 120 120 THR THR A . n A 1 136 CYS 136 121 121 CYS CYS A . n A 1 137 ARG 137 122 122 ARG ARG A . n A 1 138 LYS 138 123 123 LYS LYS A . n A 1 139 PHE 139 124 124 PHE PHE A . n A 1 140 ILE 140 125 125 ILE ILE A . n A 1 141 LYS 141 126 126 LYS LYS A . n A 1 142 ALA 142 127 127 ALA ALA A . n A 1 143 SER 143 128 128 SER SER A . n A 1 144 GLU 144 129 129 GLU GLU A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email swen.hoelder@icr.ac.uk _pdbx_contact_author.name_first Swen _pdbx_contact_author.name_last Hoelder _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8636-1488 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TWI 1 201 201 TWI 705 A . C 3 EDO 1 202 401 EDO EDO A . D 3 EDO 1 203 501 EDO EDO A . E 3 EDO 1 204 601 EDO EDO A . F 3 EDO 1 205 701 EDO EDO A . G 4 CL 1 206 1 CL CL A . H 4 CL 1 207 2 CL CL A . I 5 HOH 1 301 34 HOH HOH A . I 5 HOH 2 302 80 HOH HOH A . I 5 HOH 3 303 83 HOH HOH A . I 5 HOH 4 304 42 HOH HOH A . I 5 HOH 5 305 124 HOH HOH A . I 5 HOH 6 306 14 HOH HOH A . I 5 HOH 7 307 9 HOH HOH A . I 5 HOH 8 308 47 HOH HOH A . I 5 HOH 9 309 15 HOH HOH A . I 5 HOH 10 310 44 HOH HOH A . I 5 HOH 11 311 126 HOH HOH A . I 5 HOH 12 312 22 HOH HOH A . I 5 HOH 13 313 56 HOH HOH A . I 5 HOH 14 314 99 HOH HOH A . I 5 HOH 15 315 25 HOH HOH A . I 5 HOH 16 316 12 HOH HOH A . I 5 HOH 17 317 11 HOH HOH A . I 5 HOH 18 318 77 HOH HOH A . I 5 HOH 19 319 81 HOH HOH A . I 5 HOH 20 320 7 HOH HOH A . I 5 HOH 21 321 104 HOH HOH A . I 5 HOH 22 322 17 HOH HOH A . I 5 HOH 23 323 27 HOH HOH A . I 5 HOH 24 324 115 HOH HOH A . I 5 HOH 25 325 112 HOH HOH A . I 5 HOH 26 326 78 HOH HOH A . I 5 HOH 27 327 101 HOH HOH A . I 5 HOH 28 328 159 HOH HOH A . I 5 HOH 29 329 49 HOH HOH A . I 5 HOH 30 330 63 HOH HOH A . I 5 HOH 31 331 93 HOH HOH A . I 5 HOH 32 332 8 HOH HOH A . I 5 HOH 33 333 76 HOH HOH A . I 5 HOH 34 334 156 HOH HOH A . I 5 HOH 35 335 102 HOH HOH A . I 5 HOH 36 336 37 HOH HOH A . I 5 HOH 37 337 3 HOH HOH A . I 5 HOH 38 338 2 HOH HOH A . I 5 HOH 39 339 51 HOH HOH A . I 5 HOH 40 340 121 HOH HOH A . I 5 HOH 41 341 39 HOH HOH A . I 5 HOH 42 342 10 HOH HOH A . I 5 HOH 43 343 136 HOH HOH A . I 5 HOH 44 344 16 HOH HOH A . I 5 HOH 45 345 74 HOH HOH A . I 5 HOH 46 346 13 HOH HOH A . I 5 HOH 47 347 70 HOH HOH A . I 5 HOH 48 348 20 HOH HOH A . I 5 HOH 49 349 157 HOH HOH A . I 5 HOH 50 350 53 HOH HOH A . I 5 HOH 51 351 33 HOH HOH A . I 5 HOH 52 352 61 HOH HOH A . I 5 HOH 53 353 26 HOH HOH A . I 5 HOH 54 354 1 HOH HOH A . I 5 HOH 55 355 19 HOH HOH A . I 5 HOH 56 356 31 HOH HOH A . I 5 HOH 57 357 90 HOH HOH A . I 5 HOH 58 358 114 HOH HOH A . I 5 HOH 59 359 54 HOH HOH A . I 5 HOH 60 360 35 HOH HOH A . I 5 HOH 61 361 18 HOH HOH A . I 5 HOH 62 362 65 HOH HOH A . I 5 HOH 63 363 89 HOH HOH A . I 5 HOH 64 364 72 HOH HOH A . I 5 HOH 65 365 5 HOH HOH A . I 5 HOH 66 366 111 HOH HOH A . I 5 HOH 67 367 4 HOH HOH A . I 5 HOH 68 368 119 HOH HOH A . I 5 HOH 69 369 135 HOH HOH A . I 5 HOH 70 370 147 HOH HOH A . I 5 HOH 71 371 6 HOH HOH A . I 5 HOH 72 372 88 HOH HOH A . I 5 HOH 73 373 85 HOH HOH A . I 5 HOH 74 374 86 HOH HOH A . I 5 HOH 75 375 71 HOH HOH A . I 5 HOH 76 376 97 HOH HOH A . I 5 HOH 77 377 45 HOH HOH A . I 5 HOH 78 378 32 HOH HOH A . I 5 HOH 79 379 161 HOH HOH A . I 5 HOH 80 380 164 HOH HOH A . I 5 HOH 81 381 62 HOH HOH A . I 5 HOH 82 382 28 HOH HOH A . I 5 HOH 83 383 57 HOH HOH A . I 5 HOH 84 384 92 HOH HOH A . I 5 HOH 85 385 144 HOH HOH A . I 5 HOH 86 386 132 HOH HOH A . I 5 HOH 87 387 107 HOH HOH A . I 5 HOH 88 388 68 HOH HOH A . I 5 HOH 89 389 163 HOH HOH A . I 5 HOH 90 390 67 HOH HOH A . I 5 HOH 91 391 152 HOH HOH A . I 5 HOH 92 392 154 HOH HOH A . I 5 HOH 93 393 24 HOH HOH A . I 5 HOH 94 394 46 HOH HOH A . I 5 HOH 95 395 109 HOH HOH A . I 5 HOH 96 396 95 HOH HOH A . I 5 HOH 97 397 36 HOH HOH A . I 5 HOH 98 398 137 HOH HOH A . I 5 HOH 99 399 153 HOH HOH A . I 5 HOH 100 400 122 HOH HOH A . I 5 HOH 101 401 73 HOH HOH A . I 5 HOH 102 402 100 HOH HOH A . I 5 HOH 103 403 60 HOH HOH A . I 5 HOH 104 404 48 HOH HOH A . I 5 HOH 105 405 40 HOH HOH A . I 5 HOH 106 406 127 HOH HOH A . I 5 HOH 107 407 41 HOH HOH A . I 5 HOH 108 408 38 HOH HOH A . I 5 HOH 109 409 43 HOH HOH A . I 5 HOH 110 410 21 HOH HOH A . I 5 HOH 111 411 158 HOH HOH A . I 5 HOH 112 412 59 HOH HOH A . I 5 HOH 113 413 52 HOH HOH A . I 5 HOH 114 414 105 HOH HOH A . I 5 HOH 115 415 160 HOH HOH A . I 5 HOH 116 416 66 HOH HOH A . I 5 HOH 117 417 91 HOH HOH A . I 5 HOH 118 418 58 HOH HOH A . I 5 HOH 119 419 131 HOH HOH A . I 5 HOH 120 420 69 HOH HOH A . I 5 HOH 121 421 128 HOH HOH A . I 5 HOH 122 422 167 HOH HOH A . I 5 HOH 123 423 94 HOH HOH A . I 5 HOH 124 424 108 HOH HOH A . I 5 HOH 125 425 87 HOH HOH A . I 5 HOH 126 426 75 HOH HOH A . I 5 HOH 127 427 96 HOH HOH A . I 5 HOH 128 428 134 HOH HOH A . I 5 HOH 129 429 142 HOH HOH A . I 5 HOH 130 430 143 HOH HOH A . I 5 HOH 131 431 155 HOH HOH A . I 5 HOH 132 432 120 HOH HOH A . I 5 HOH 133 433 129 HOH HOH A . I 5 HOH 134 434 117 HOH HOH A . I 5 HOH 135 435 113 HOH HOH A . I 5 HOH 136 436 139 HOH HOH A . I 5 HOH 137 437 116 HOH HOH A . I 5 HOH 138 438 125 HOH HOH A . I 5 HOH 139 439 166 HOH HOH A . I 5 HOH 140 440 141 HOH HOH A . I 5 HOH 141 441 123 HOH HOH A . I 5 HOH 142 442 140 HOH HOH A . I 5 HOH 143 443 130 HOH HOH A . I 5 HOH 144 444 146 HOH HOH A . I 5 HOH 145 445 145 HOH HOH A . I 5 HOH 146 446 133 HOH HOH A . I 5 HOH 147 447 148 HOH HOH A . I 5 HOH 148 448 162 HOH HOH A . I 5 HOH 149 449 150 HOH HOH A . I 5 HOH 150 450 168 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5400 ? 1 MORE -53 ? 1 'SSA (A^2)' 13620 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5000000000 0.8660254038 0.0000000000 -33.7940000000 0.8660254038 -0.5000000000 0.0000000000 58.5329249910 0.0000000000 0.0000000000 -1.0000000000 27.8603333333 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 324 ? I HOH . 2 1 A HOH 358 ? I HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-04-26 2 'Structure model' 1 1 2023-05-10 3 'Structure model' 2 0 2023-05-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Non-polymer description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_chem_comp.formula' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -19.1660 30.1736 2.3832 -0.0841 ? -0.0264 ? 0.0013 ? 0.1331 ? 0.0951 ? -0.0430 ? 6.2449 ? 3.0035 ? -2.2638 ? 4.1228 ? 1.1747 ? 0.0629 ? -0.0876 ? 0.3174 ? 0.2926 ? -0.1099 ? 0.0610 ? -0.1011 ? -0.1334 ? 0.2892 ? 0.0267 ? 2 'X-RAY DIFFRACTION' ? refined -36.8669 22.2331 21.5060 0.0229 ? 0.0122 ? 0.0272 ? -0.0044 ? 0.0199 ? -0.0086 ? 0.4938 ? 0.0578 ? 0.1134 ? 1.8171 ? -1.3833 ? 2.1000 ? 0.0528 ? -0.0486 ? 0.0934 ? 0.2334 ? 0.0545 ? 0.1496 ? -0.1768 ? -0.1403 ? -0.1073 ? 3 'X-RAY DIFFRACTION' ? refined -39.3796 16.6821 27.9099 0.0303 ? -0.0421 ? 0.0376 ? 0.0208 ? 0.0201 ? -0.0089 ? 0.4879 ? 0.2542 ? 0.4915 ? 2.4723 ? -1.8570 ? 2.7390 ? 0.0912 ? -0.0293 ? 0.0725 ? 0.1527 ? -0.0500 ? 0.2100 ? 0.0476 ? -0.1133 ? -0.0412 ? 4 'X-RAY DIFFRACTION' ? refined -31.5486 9.5984 19.1244 0.0566 ? -0.0214 ? -0.0187 ? -0.0467 ? -0.0018 ? 0.0129 ? 3.7351 ? 1.0326 ? -0.7085 ? 3.1564 ? -1.1056 ? 0.2142 ? -0.0706 ? 0.1523 ? -0.1084 ? 0.0335 ? -0.0037 ? -0.0667 ? 0.1457 ? -0.0018 ? 0.0743 ? 5 'X-RAY DIFFRACTION' ? refined -39.7530 3.1850 17.7345 0.0440 ? -0.1172 ? -0.0915 ? -0.0395 ? 0.0330 ? -0.0180 ? 3.2806 ? 3.2583 ? -0.7021 ? 5.2080 ? 2.9553 ? 4.3626 ? 0.1860 ? 0.0849 ? -0.2900 ? -0.4380 ? -0.2535 ? 0.0625 ? 0.2417 ? -0.4889 ? 0.0675 ? 6 'X-RAY DIFFRACTION' ? refined -34.4567 7.0636 33.0087 0.1491 ? -0.1190 ? -0.0172 ? -0.0645 ? 0.0638 ? -0.0721 ? 4.4980 ? 1.6389 ? 2.2552 ? 2.0110 ? 1.1240 ? 2.7266 ? 0.0973 ? -0.1377 ? -0.0396 ? 0.5471 ? -0.1719 ? 0.3017 ? 0.1414 ? -0.1284 ? 0.0746 ? 7 'X-RAY DIFFRACTION' ? refined -29.3224 19.0979 28.6671 0.0891 ? -0.0663 ? -0.0214 ? -0.0261 ? 0.0052 ? -0.0167 ? 0.8850 ? 0.9633 ? 0.5546 ? 2.1841 ? -2.4710 ? 2.7903 ? 0.2768 ? -0.0399 ? 0.1413 ? 0.3017 ? -0.2354 ? 0.0090 ? -0.1261 ? -0.0583 ? -0.0414 ? 8 'X-RAY DIFFRACTION' ? refined -21.8462 22.6477 32.6015 0.1381 ? -0.1359 ? -0.1199 ? -0.0453 ? 0.0202 ? -0.0414 ? 1.1161 ? 0.0624 ? 0.4412 ? 0.7122 ? 0.4076 ? 2.5387 ? 0.2303 ? -0.0846 ? 0.3329 ? 0.3097 ? -0.3292 ? -0.4363 ? -0.2447 ? -0.2745 ? 0.0989 ? 9 'X-RAY DIFFRACTION' ? refined -23.3199 10.6850 31.1831 0.0848 ? -0.0590 ? -0.1104 ? -0.0479 ? 0.1053 ? 0.0023 ? 1.0467 ? 1.6847 ? 0.9533 ? 1.6008 ? 0.5581 ? 2.9433 ? 0.3510 ? -0.0630 ? -0.3641 ? 0.2535 ? -0.4020 ? -0.3295 ? 0.1255 ? -0.0511 ? 0.0510 ? 10 'X-RAY DIFFRACTION' ? refined -13.4259 14.7825 31.8396 0.0024 ? -0.0063 ? -0.1511 ? -0.0685 ? 0.0882 ? 0.0879 ? 3.5532 ? 2.1094 ? 3.2608 ? 5.8423 ? 0.1632 ? 1.1555 ? -0.0784 ? 0.3736 ? -0.0919 ? 0.3114 ? 0.0196 ? -0.5219 ? -0.1273 ? -0.0263 ? 0.0588 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 0 ? ? ? A 13 ? ? '{A|0 - 13}' 2 'X-RAY DIFFRACTION' 2 ? ? A 14 ? ? ? A 40 ? ? '{A|14 - 40}' 3 'X-RAY DIFFRACTION' 3 ? ? A 41 ? ? ? A 46 ? ? '{A|41 - 46}' 4 'X-RAY DIFFRACTION' 4 ? ? A 47 ? ? ? A 61 ? ? '{A|47 - 61}' 5 'X-RAY DIFFRACTION' 5 ? ? A 62 ? ? ? A 70 ? ? '{A|62 - 70}' 6 'X-RAY DIFFRACTION' 6 ? ? A 71 ? ? ? A 79 ? ? '{A|71 - 79}' 7 'X-RAY DIFFRACTION' 7 ? ? A 80 ? ? ? A 92 ? ? '{A|80 - 92}' 8 'X-RAY DIFFRACTION' 8 ? ? A 93 ? ? ? A 101 ? ? '{A|93 - 101}' 9 'X-RAY DIFFRACTION' 9 ? ? A 102 ? ? ? A 114 ? ? '{A|102 - 114}' 10 'X-RAY DIFFRACTION' 10 ? ? A 115 ? ? ? A 129 ? ? '{A|115 - 129}' # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.7 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? '2.10.4 (3-FEB-2022)' 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 5 # _pdbx_entry_details.entry_id 8C78 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 39 ? ? 55.33 -123.74 2 1 SER A 93 ? A 78.54 -1.73 3 1 SER A 93 ? B 77.89 -0.17 4 1 GLN A 113 ? ? 61.94 62.59 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 13 ? NE ? A ARG 28 NE 2 1 Y 1 A ARG 13 ? CZ ? A ARG 28 CZ 3 1 Y 1 A ARG 13 ? NH1 ? A ARG 28 NH1 4 1 Y 1 A ARG 13 ? NH2 ? A ARG 28 NH2 5 1 Y 1 A GLN 64 ? CD ? A GLN 79 CD 6 1 Y 1 A GLN 64 ? OE1 ? A GLN 79 OE1 7 1 Y 1 A GLN 64 ? NE2 ? A GLN 79 NE2 8 1 Y 1 A ARG 94 ? NH2 ? A ARG 109 NH2 9 1 Y 1 A ARG 98 ? CD ? A ARG 113 CD 10 1 Y 1 A ARG 98 ? NE ? A ARG 113 NE 11 1 Y 1 A ARG 98 ? CZ ? A ARG 113 CZ 12 1 Y 1 A ARG 98 ? NH1 ? A ARG 113 NH1 13 1 Y 1 A ARG 98 ? NH2 ? A ARG 113 NH2 14 1 Y 1 A LYS 123 ? CD ? A LYS 138 CD 15 1 Y 1 A LYS 123 ? CE ? A LYS 138 CE 16 1 Y 1 A LYS 123 ? NZ ? A LYS 138 NZ 17 1 Y 1 A LYS 126 ? CE ? A LYS 141 CE 18 1 Y 1 A LYS 126 ? NZ ? A LYS 141 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -14 ? A GLY 1 2 1 Y 1 A PRO -13 ? A PRO 2 3 1 Y 1 A GLY -12 ? A GLY 3 4 1 Y 1 A LEU -11 ? A LEU 4 5 1 Y 1 A ASP -10 ? A ASP 5 6 1 Y 1 A TYR -9 ? A TYR 6 7 1 Y 1 A LYS -8 ? A LYS 7 8 1 Y 1 A ASP -7 ? A ASP 8 9 1 Y 1 A ASP -6 ? A ASP 9 10 1 Y 1 A ASP -5 ? A ASP 10 11 1 Y 1 A ASP -4 ? A ASP 11 12 1 Y 1 A LYS -3 ? A LYS 12 13 1 Y 1 A GLU -2 ? A GLU 13 14 1 Y 1 A ASN -1 ? A ASN 14 # _pdbx_audit_support.funding_organization 'Cancer Research UK' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number C309/A11566 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id TWI _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id TWI _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2~{S})-10-[(3-chloranyl-2-fluoranyl-pyridin-4-yl)amino]-2-cyclopropyl-3,3-bis(fluoranyl)-7-methyl-2,4-dihydro-1~{H}-[1,4]oxazepino[2,3-c]quinolin-6-one ; TWI 3 1,2-ETHANEDIOL EDO 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BIM _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #