HEADER TRANSCRIPTION 13-JAN-23 8C78 TITLE CRYSTAL STRUCTURE OF HUMAN BCL6 BTB DOMAIN IN COMPLEX WITH COMPOUND TITLE 2 CCT374705 COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET48B KEYWDS INHIBITOR, CANCER, LYMPHOMA, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.-V.LE BIHAN,R.L.M.VAN MONTFORT REVDAT 3 24-MAY-23 8C78 1 FORMUL REVDAT 2 10-MAY-23 8C78 1 JRNL REVDAT 1 26-APR-23 8C78 0 JRNL AUTH A.C.HARNDEN,O.A.DAVIS,G.M.BOX,A.HAYES,L.D.JOHNSON, JRNL AUTH 2 A.T.HENLEY,A.K.DE HAVEN BRANDON,M.VALENTI,K.J.CHEUNG, JRNL AUTH 3 A.BRENNAN,R.HUCKVALE,O.A.PIERRAT,R.TALBOT,M.D.BRIGHT, JRNL AUTH 4 H.A.AKPINAR,D.S.J.MILLER,D.TARANTINO,S.GOWAN,S.DE KLERK, JRNL AUTH 5 P.C.MCANDREW,Y.V.LE BIHAN,M.MENICONI,R.BURKE,V.KIRKIN, JRNL AUTH 6 R.L.M.VAN MONTFORT,F.I.RAYNAUD,O.W.ROSSANESE,B.R.BELLENIE, JRNL AUTH 7 S.HOELDER JRNL TITL DISCOVERY OF AN IN VIVO CHEMICAL PROBE FOR BCL6 INHIBITION JRNL TITL 2 BY OPTIMIZATION OF TRICYCLIC QUINOLINONES. JRNL REF J.MED.CHEM. V. 66 5892 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37026591 JRNL DOI 10.1021/ACS.JMEDCHEM.3C00155 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (3-FEB-2022) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21793 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 1034 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.81 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 436 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2724 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 412 REMARK 3 BIN R VALUE (WORKING SET) : 0.2725 REMARK 3 BIN FREE R VALUE : 0.2697 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 24 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1023 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.35200 REMARK 3 B22 (A**2) : -2.35200 REMARK 3 B33 (A**2) : 4.70400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.220 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.111 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.109 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.099 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.101 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1155 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1574 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 412 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 223 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1155 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 152 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 12 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1150 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.90 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.25 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.32 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|0 - 13} REMARK 3 ORIGIN FOR THE GROUP (A): -19.1660 30.1736 2.3832 REMARK 3 T TENSOR REMARK 3 T11: -0.0841 T22: 0.1331 REMARK 3 T33: -0.0430 T12: -0.0264 REMARK 3 T13: 0.0013 T23: 0.0951 REMARK 3 L TENSOR REMARK 3 L11: 6.2449 L22: 4.1228 REMARK 3 L33: 0.0629 L12: 3.0035 REMARK 3 L13: -2.2638 L23: 1.1747 REMARK 3 S TENSOR REMARK 3 S11: -0.0876 S12: 0.3174 S13: 0.2926 REMARK 3 S21: -0.1099 S22: 0.0610 S23: -0.1011 REMARK 3 S31: -0.1334 S32: 0.2892 S33: 0.0267 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|14 - 40} REMARK 3 ORIGIN FOR THE GROUP (A): -36.8669 22.2331 21.5060 REMARK 3 T TENSOR REMARK 3 T11: 0.0229 T22: -0.0044 REMARK 3 T33: -0.0086 T12: 0.0122 REMARK 3 T13: 0.0272 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 0.4938 L22: 1.8171 REMARK 3 L33: 2.1000 L12: 0.0578 REMARK 3 L13: 0.1134 L23: -1.3833 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: -0.0486 S13: 0.0934 REMARK 3 S21: 0.2334 S22: 0.0545 S23: 0.1496 REMARK 3 S31: -0.1768 S32: -0.1403 S33: -0.1073 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|41 - 46} REMARK 3 ORIGIN FOR THE GROUP (A): -39.3796 16.6821 27.9099 REMARK 3 T TENSOR REMARK 3 T11: 0.0303 T22: 0.0208 REMARK 3 T33: -0.0089 T12: -0.0421 REMARK 3 T13: 0.0376 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.4879 L22: 2.4723 REMARK 3 L33: 2.7390 L12: 0.2542 REMARK 3 L13: 0.4915 L23: -1.8570 REMARK 3 S TENSOR REMARK 3 S11: 0.0912 S12: -0.0293 S13: 0.0725 REMARK 3 S21: 0.1527 S22: -0.0500 S23: 0.2100 REMARK 3 S31: 0.0476 S32: -0.1133 S33: -0.0412 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|47 - 61} REMARK 3 ORIGIN FOR THE GROUP (A): -31.5486 9.5984 19.1244 REMARK 3 T TENSOR REMARK 3 T11: 0.0566 T22: -0.0467 REMARK 3 T33: 0.0129 T12: -0.0214 REMARK 3 T13: -0.0187 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 3.7351 L22: 3.1564 REMARK 3 L33: 0.2142 L12: 1.0326 REMARK 3 L13: -0.7085 L23: -1.1056 REMARK 3 S TENSOR REMARK 3 S11: -0.0706 S12: 0.1523 S13: -0.1084 REMARK 3 S21: 0.0335 S22: -0.0037 S23: -0.0667 REMARK 3 S31: 0.1457 S32: -0.0018 S33: 0.0743 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|62 - 70} REMARK 3 ORIGIN FOR THE GROUP (A): -39.7530 3.1850 17.7345 REMARK 3 T TENSOR REMARK 3 T11: 0.0440 T22: -0.0395 REMARK 3 T33: -0.0180 T12: -0.1172 REMARK 3 T13: -0.0915 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 3.2806 L22: 5.2080 REMARK 3 L33: 4.3626 L12: 3.2583 REMARK 3 L13: -0.7021 L23: 2.9553 REMARK 3 S TENSOR REMARK 3 S11: 0.1860 S12: 0.0849 S13: -0.2900 REMARK 3 S21: -0.4380 S22: -0.2535 S23: 0.0625 REMARK 3 S31: 0.2417 S32: -0.4889 S33: 0.0675 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|71 - 79} REMARK 3 ORIGIN FOR THE GROUP (A): -34.4567 7.0636 33.0087 REMARK 3 T TENSOR REMARK 3 T11: 0.1491 T22: -0.0645 REMARK 3 T33: -0.0721 T12: -0.1190 REMARK 3 T13: -0.0172 T23: 0.0638 REMARK 3 L TENSOR REMARK 3 L11: 4.4980 L22: 2.0110 REMARK 3 L33: 2.7266 L12: 1.6389 REMARK 3 L13: 2.2552 L23: 1.1240 REMARK 3 S TENSOR REMARK 3 S11: 0.0973 S12: -0.1377 S13: -0.0396 REMARK 3 S21: 0.5471 S22: -0.1719 S23: 0.3017 REMARK 3 S31: 0.1414 S32: -0.1284 S33: 0.0746 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|80 - 92} REMARK 3 ORIGIN FOR THE GROUP (A): -29.3224 19.0979 28.6671 REMARK 3 T TENSOR REMARK 3 T11: 0.0891 T22: -0.0261 REMARK 3 T33: -0.0167 T12: -0.0663 REMARK 3 T13: -0.0214 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.8850 L22: 2.1841 REMARK 3 L33: 2.7903 L12: 0.9633 REMARK 3 L13: 0.5546 L23: -2.4710 REMARK 3 S TENSOR REMARK 3 S11: 0.2768 S12: -0.0399 S13: 0.1413 REMARK 3 S21: 0.3017 S22: -0.2354 S23: 0.0090 REMARK 3 S31: -0.1261 S32: -0.0583 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|93 - 101} REMARK 3 ORIGIN FOR THE GROUP (A): -21.8462 22.6477 32.6015 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: -0.0453 REMARK 3 T33: -0.0414 T12: -0.1359 REMARK 3 T13: -0.1199 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.1161 L22: 0.7122 REMARK 3 L33: 2.5387 L12: 0.0624 REMARK 3 L13: 0.4412 L23: 0.4076 REMARK 3 S TENSOR REMARK 3 S11: 0.2303 S12: -0.0846 S13: 0.3329 REMARK 3 S21: 0.3097 S22: -0.3292 S23: -0.4363 REMARK 3 S31: -0.2447 S32: -0.2745 S33: 0.0989 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|102 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): -23.3199 10.6850 31.1831 REMARK 3 T TENSOR REMARK 3 T11: 0.0848 T22: -0.0479 REMARK 3 T33: 0.0023 T12: -0.0590 REMARK 3 T13: -0.1104 T23: 0.1053 REMARK 3 L TENSOR REMARK 3 L11: 1.0467 L22: 1.6008 REMARK 3 L33: 2.9433 L12: 1.6847 REMARK 3 L13: 0.9533 L23: 0.5581 REMARK 3 S TENSOR REMARK 3 S11: 0.3510 S12: -0.0630 S13: -0.3641 REMARK 3 S21: 0.2535 S22: -0.4020 S23: -0.3295 REMARK 3 S31: 0.1255 S32: -0.0511 S33: 0.0510 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {A|115 - 129} REMARK 3 ORIGIN FOR THE GROUP (A): -13.4259 14.7825 31.8396 REMARK 3 T TENSOR REMARK 3 T11: 0.0024 T22: -0.0685 REMARK 3 T33: 0.0879 T12: -0.0063 REMARK 3 T13: -0.1511 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 3.5532 L22: 5.8423 REMARK 3 L33: 1.1555 L12: 2.1094 REMARK 3 L13: 3.2608 L23: 0.1632 REMARK 3 S TENSOR REMARK 3 S11: -0.0784 S12: 0.3736 S13: -0.0919 REMARK 3 S21: 0.3114 S22: 0.0196 S23: -0.5219 REMARK 3 S31: -0.1273 S32: -0.0263 S33: 0.0588 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8C78 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292127933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21872 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.40 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 28.10 REMARK 200 R MERGE FOR SHELL (I) : 2.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 MICROLITER OF BCL6-BTB AT 10 MG/ML REMARK 280 PLUS 1.5 MICROLITER OF A CRYSTALLISATION SOLUTION CONSISTING OF REMARK 280 0.1 M TRIS PH 7.5 AND 0.80 M NA/K TARTRATE, AGAINST 300 REMARK 280 MICROLITER OF CRYSTALLISATION SOLUTION., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.72067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 111.44133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.58100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 139.30167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.86033 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.72067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 111.44133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 139.30167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 83.58100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.86033 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 -33.79400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 58.53292 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.86033 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 324 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -14 REMARK 465 PRO A -13 REMARK 465 GLY A -12 REMARK 465 LEU A -11 REMARK 465 ASP A -10 REMARK 465 TYR A -9 REMARK 465 LYS A -8 REMARK 465 ASP A -7 REMARK 465 ASP A -6 REMARK 465 ASP A -5 REMARK 465 ASP A -4 REMARK 465 LYS A -3 REMARK 465 GLU A -2 REMARK 465 ASN A -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 13 NE CZ NH1 NH2 REMARK 470 GLN A 64 CD OE1 NE2 REMARK 470 ARG A 94 NH2 REMARK 470 ARG A 98 CD NE CZ NH1 NH2 REMARK 470 LYS A 123 CD CE NZ REMARK 470 LYS A 126 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -123.74 55.33 REMARK 500 SER A 93 -1.73 78.54 REMARK 500 SER A 93 -0.17 77.89 REMARK 500 GLN A 113 62.59 61.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 8C78 A 5 129 UNP P41182 BCL6_HUMAN 5 129 SEQADV 8C78 GLY A -14 UNP P41182 EXPRESSION TAG SEQADV 8C78 PRO A -13 UNP P41182 EXPRESSION TAG SEQADV 8C78 GLY A -12 UNP P41182 EXPRESSION TAG SEQADV 8C78 LEU A -11 UNP P41182 EXPRESSION TAG SEQADV 8C78 ASP A -10 UNP P41182 EXPRESSION TAG SEQADV 8C78 TYR A -9 UNP P41182 EXPRESSION TAG SEQADV 8C78 LYS A -8 UNP P41182 EXPRESSION TAG SEQADV 8C78 ASP A -7 UNP P41182 EXPRESSION TAG SEQADV 8C78 ASP A -6 UNP P41182 EXPRESSION TAG SEQADV 8C78 ASP A -5 UNP P41182 EXPRESSION TAG SEQADV 8C78 ASP A -4 UNP P41182 EXPRESSION TAG SEQADV 8C78 LYS A -3 UNP P41182 EXPRESSION TAG SEQADV 8C78 GLU A -2 UNP P41182 EXPRESSION TAG SEQADV 8C78 ASN A -1 UNP P41182 EXPRESSION TAG SEQADV 8C78 LEU A 0 UNP P41182 EXPRESSION TAG SEQADV 8C78 TYR A 1 UNP P41182 EXPRESSION TAG SEQADV 8C78 PHE A 2 UNP P41182 EXPRESSION TAG SEQADV 8C78 GLN A 3 UNP P41182 EXPRESSION TAG SEQADV 8C78 GLY A 4 UNP P41182 EXPRESSION TAG SEQRES 1 A 144 GLY PRO GLY LEU ASP TYR LYS ASP ASP ASP ASP LYS GLU SEQRES 2 A 144 ASN LEU TYR PHE GLN GLY ALA ASP SER CYS ILE GLN PHE SEQRES 3 A 144 THR ARG HIS ALA SER ASP VAL LEU LEU ASN LEU ASN ARG SEQRES 4 A 144 LEU ARG SER ARG ASP ILE LEU THR ASP VAL VAL ILE VAL SEQRES 5 A 144 VAL SER ARG GLU GLN PHE ARG ALA HIS LYS THR VAL LEU SEQRES 6 A 144 MET ALA CYS SER GLY LEU PHE TYR SER ILE PHE THR ASP SEQRES 7 A 144 GLN LEU LYS CYS ASN LEU SER VAL ILE ASN LEU ASP PRO SEQRES 8 A 144 GLU ILE ASN PRO GLU GLY PHE CYS ILE LEU LEU ASP PHE SEQRES 9 A 144 MET TYR THR SER ARG LEU ASN LEU ARG GLU GLY ASN ILE SEQRES 10 A 144 MET ALA VAL MET ALA THR ALA MET TYR LEU GLN MET GLU SEQRES 11 A 144 HIS VAL VAL ASP THR CYS ARG LYS PHE ILE LYS ALA SER SEQRES 12 A 144 GLU HET TWI A 201 31 HET EDO A 202 4 HET EDO A 203 4 HET EDO A 204 4 HET EDO A 205 4 HET CL A 206 1 HET CL A 207 1 HETNAM TWI (2~{S})-10-[(3-CHLORANYL-2-FLUORANYL-PYRIDIN-4-YL) HETNAM 2 TWI AMINO]-2-CYCLOPROPYL-3,3-BIS(FLUORANYL)-7-METHYL-2,4- HETNAM 3 TWI DIHYDRO-1~{H}-[1,4]OXAZEPINO[2,3-C]QUINOLIN-6-ONE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 TWI C21 H18 CL F3 N4 O2 FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 CL 2(CL 1-) FORMUL 9 HOH *150(H2 O) HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 CYS A 53 1 8 HELIX 3 AA3 SER A 54 THR A 62 1 9 HELIX 4 AA4 LEU A 65 LEU A 69 5 5 HELIX 5 AA5 ASN A 79 SER A 93 1 15 HELIX 6 AA6 ASN A 101 GLN A 113 1 13 HELIX 7 AA7 MET A 114 GLU A 129 1 16 SHEET 1 AA1 2 TYR A 1 GLN A 3 0 SHEET 2 AA1 2 ILE A 9 PHE A 11 -1 O GLN A 10 N PHE A 2 SHEET 1 AA2 3 GLU A 41 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 38 -1 N VAL A 38 O GLU A 41 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 CRYST1 67.588 67.588 167.162 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014796 0.008542 0.000000 0.00000 SCALE2 0.000000 0.017084 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005982 0.00000