HEADER SUGAR BINDING PROTEIN 19-JAN-23 8C8F TITLE CRYSTAL STRUCTURE OF THE E. COLI MALTODEXTRIN-BINDING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTOSE/MALTODEXTRIN-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MMBP,MALTODEXTRIN-BINDING PROTEIN,MALTOSE-BINDING PROTEIN, COMPND 5 MBP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI BL21; SOURCE 3 ORGANISM_TAXID: 511693 KEYWDS MALTOSE BINDING PROTEIN, NATIVE MBP, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.MARQUEZ ESPINOZA,M.J.RODRIGUES,V.OLIERIC,E.FREISINGER REVDAT 2 19-JUN-24 8C8F 1 REMARK REVDAT 1 22-FEB-23 8C8F 0 JRNL AUTH A.MARQUEZ ESPINOZA,M.J.RODRIGUES,V.OLIERIC,E.FREISINGER JRNL TITL CRYSTAL STRUCTURE OF THE E. COLI MALTODEXTRIN-BINDING JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 104767 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.125 REMARK 3 R VALUE (WORKING SET) : 0.124 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5585 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7432 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.1630 REMARK 3 BIN FREE R VALUE SET COUNT : 406 REMARK 3 BIN FREE R VALUE : 0.1920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2853 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 392 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.031 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.032 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.020 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.965 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.978 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.974 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3044 ; 0.017 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2830 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4144 ; 1.983 ; 1.645 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6604 ; 1.670 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 391 ; 5.793 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;32.471 ;24.964 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 515 ;13.624 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;15.811 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 397 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3460 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 593 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1537 ; 1.986 ; 0.864 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1536 ; 1.984 ; 0.862 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1937 ; 2.532 ; 1.306 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1938 ; 2.533 ; 1.307 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1507 ; 2.608 ; 1.129 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1508 ; 2.617 ; 1.130 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2208 ; 3.064 ; 1.580 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3576 ; 3.243 ;11.644 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3479 ; 3.086 ;11.098 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5874 ; 3.570 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8C8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292128059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110383 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.150 REMARK 200 RESOLUTION RANGE LOW (A) : 56.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.17 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 7.4, 30 % PEG SMEAR REMARK 280 BROAD, 0.1 M NABR AND 0.1 M KSCN, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.48050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -24 REMARK 465 LYS A -23 REMARK 465 ILE A -22 REMARK 465 LYS A -21 REMARK 465 THR A -20 REMARK 465 GLY A -19 REMARK 465 ALA A -18 REMARK 465 ARG A -17 REMARK 465 ILE A -16 REMARK 465 LEU A -15 REMARK 465 ALA A -14 REMARK 465 LEU A -13 REMARK 465 SER A -12 REMARK 465 ALA A -11 REMARK 465 LEU A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 MET A -7 REMARK 465 MET A -6 REMARK 465 PHE A -5 REMARK 465 SER A -4 REMARK 465 ALA A -3 REMARK 465 SER A -2 REMARK 465 ALA A -1 REMARK 465 LEU A 0 REMARK 465 ALA A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 LYS A 143 CD CE NZ REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 ASN A 174 CG OD1 ND2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 LYS A 296 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 333 O HOH A 501 1.91 REMARK 500 O HOH A 753 O HOH A 816 1.91 REMARK 500 O HOH A 684 O HOH A 817 1.93 REMARK 500 O HOH A 501 O HOH A 573 1.98 REMARK 500 O HOH A 626 O HOH A 832 2.03 REMARK 500 O HOH A 565 O HOH A 789 2.08 REMARK 500 O HOH A 522 O HOH A 616 2.11 REMARK 500 O HOH A 731 O HOH A 801 2.15 REMARK 500 O HOH A 527 O HOH A 691 2.17 REMARK 500 O HOH A 541 O HOH A 698 2.17 REMARK 500 OE1 GLU A 39 O HOH A 502 2.17 REMARK 500 O HOH A 805 O HOH A 832 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 289 CD GLU A 289 OE1 0.066 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 67 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 123 78.15 -150.87 REMARK 500 ASN A 174 -101.99 48.35 REMARK 500 TYR A 284 -56.59 -121.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASP A 185 -13.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 885 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A 886 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A 887 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A 888 DISTANCE = 6.73 ANGSTROMS REMARK 525 HOH A 889 DISTANCE = 7.39 ANGSTROMS REMARK 525 HOH A 890 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH A 891 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH A 892 DISTANCE = 7.77 ANGSTROMS DBREF 8C8F A -24 371 UNP P0AEY0 MALE_ECO57 1 396 SEQRES 1 A 396 MET LYS ILE LYS THR GLY ALA ARG ILE LEU ALA LEU SER SEQRES 2 A 396 ALA LEU THR THR MET MET PHE SER ALA SER ALA LEU ALA SEQRES 3 A 396 LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP ILE ASN GLY SEQRES 4 A 396 ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL GLY LYS LYS SEQRES 5 A 396 PHE GLU LYS ASP THR GLY ILE LYS VAL THR VAL GLU HIS SEQRES 6 A 396 PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN VAL ALA ALA SEQRES 7 A 396 THR GLY ASP GLY PRO ASP ILE ILE PHE TRP ALA HIS ASP SEQRES 8 A 396 ARG PHE GLY GLY TYR ALA GLN SER GLY LEU LEU ALA GLU SEQRES 9 A 396 ILE THR PRO ASP LYS ALA PHE GLN ASP LYS LEU TYR PRO SEQRES 10 A 396 PHE THR TRP ASP ALA VAL ARG TYR ASN GLY LYS LEU ILE SEQRES 11 A 396 ALA TYR PRO ILE ALA VAL GLU ALA LEU SER LEU ILE TYR SEQRES 12 A 396 ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS THR TRP GLU SEQRES 13 A 396 GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS ALA LYS GLY SEQRES 14 A 396 LYS SER ALA LEU MET PHE ASN LEU GLN GLU PRO TYR PHE SEQRES 15 A 396 THR TRP PRO LEU ILE ALA ALA ASP GLY GLY TYR ALA PHE SEQRES 16 A 396 LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS ASP VAL GLY SEQRES 17 A 396 VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU THR PHE LEU SEQRES 18 A 396 VAL ASP LEU ILE LYS ASN LYS HIS MET ASN ALA ASP THR SEQRES 19 A 396 ASP TYR SER ILE ALA GLU ALA ALA PHE ASN LYS GLY GLU SEQRES 20 A 396 THR ALA MET THR ILE ASN GLY PRO TRP ALA TRP SER ASN SEQRES 21 A 396 ILE ASP THR SER LYS VAL ASN TYR GLY VAL THR VAL LEU SEQRES 22 A 396 PRO THR PHE LYS GLY GLN PRO SER LYS PRO PHE VAL GLY SEQRES 23 A 396 VAL LEU SER ALA GLY ILE ASN ALA ALA SER PRO ASN LYS SEQRES 24 A 396 GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR LEU LEU THR SEQRES 25 A 396 ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP LYS PRO LEU SEQRES 26 A 396 GLY ALA VAL ALA LEU LYS SER TYR GLU GLU GLU LEU ALA SEQRES 27 A 396 LYS ASP PRO ARG ILE ALA ALA THR MET GLU ASN ALA GLN SEQRES 28 A 396 LYS GLY GLU ILE MET PRO ASN ILE PRO GLN MET SER ALA SEQRES 29 A 396 PHE TRP TYR ALA VAL ARG THR ALA VAL ILE ASN ALA ALA SEQRES 30 A 396 SER GLY ARG GLN THR VAL ASP GLU ALA LEU LYS ASP ALA SEQRES 31 A 396 GLN THR ARG ILE THR LYS HET PEG A 401 7 HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 PEG C4 H10 O3 FORMUL 3 HOH *392(H2 O) HELIX 1 AA1 GLY A 17 GLY A 33 1 17 HELIX 2 AA2 LYS A 43 ALA A 53 1 11 HELIX 3 AA3 HIS A 65 SER A 74 1 10 HELIX 4 AA4 ASP A 83 ASP A 88 1 6 HELIX 5 AA5 TYR A 91 VAL A 98 1 8 HELIX 6 AA6 THR A 129 GLU A 131 5 3 HELIX 7 AA7 GLU A 132 ALA A 142 1 11 HELIX 8 AA8 GLU A 154 ASP A 165 1 12 HELIX 9 AA9 ASN A 186 ASN A 202 1 17 HELIX 10 AB1 ASP A 210 LYS A 220 1 11 HELIX 11 AB2 GLY A 229 ILE A 236 5 8 HELIX 12 AB3 ASN A 273 TYR A 284 1 12 HELIX 13 AB4 THR A 287 LYS A 298 1 12 HELIX 14 AB5 LEU A 305 ALA A 313 1 9 HELIX 15 AB6 ASP A 315 GLY A 328 1 14 HELIX 16 AB7 GLN A 336 GLY A 354 1 19 HELIX 17 AB8 THR A 357 THR A 370 1 14 SHEET 1 AA1 6 VAL A 36 GLU A 39 0 SHEET 2 AA1 6 LEU A 8 TRP A 11 1 N ILE A 10 O GLU A 39 SHEET 3 AA1 6 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 4 AA1 6 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 5 AA1 6 TYR A 107 GLU A 112 -1 N ILE A 109 O LEU A 263 SHEET 6 AA1 6 ALA A 302 VAL A 303 -1 O ALA A 302 N VAL A 111 SHEET 1 AA2 5 VAL A 36 GLU A 39 0 SHEET 2 AA2 5 LEU A 8 TRP A 11 1 N ILE A 10 O GLU A 39 SHEET 3 AA2 5 ILE A 60 ALA A 64 1 O PHE A 62 N TRP A 11 SHEET 4 AA2 5 PHE A 259 ILE A 267 -1 O GLY A 266 N ILE A 61 SHEET 5 AA2 5 GLU A 329 ILE A 330 1 O GLU A 329 N VAL A 260 SHEET 1 AA3 2 ARG A 99 TYR A 100 0 SHEET 2 AA3 2 LYS A 103 LEU A 104 -1 O LYS A 103 N TYR A 100 SHEET 1 AA4 3 MET A 225 ASN A 228 0 SHEET 2 AA4 3 SER A 115 ASN A 119 -1 N ILE A 117 O THR A 226 SHEET 3 AA4 3 TYR A 243 THR A 246 -1 O THR A 246 N LEU A 116 SHEET 1 AA5 2 LYS A 171 GLU A 173 0 SHEET 2 AA5 2 LYS A 176 ASP A 178 -1 O LYS A 176 N GLU A 173 SHEET 1 AA6 2 THR A 250 PHE A 251 0 SHEET 2 AA6 2 GLN A 254 PRO A 255 -1 O GLN A 254 N PHE A 251 CRYST1 43.709 64.961 57.090 90.00 101.05 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022879 0.000000 0.004467 0.00000 SCALE2 0.000000 0.015394 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017847 0.00000