HEADER RNA BINDING PROTEIN 21-JAN-23 8C9F TITLE PRIESTIA MEGATERIUM INACTIVE HIGH MOTIF MUTANT OF TYPE1 ISOLEUCYL-TRNA TITLE 2 SYNTHETASE COMPLEXED WITH AN ISOLEUCYL-ADENYLATE ANALOGUE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOLEUCINE--TRNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ISOLEUCYL-TRNA SYNTHETASE,ILERS; COMPND 5 EC: 6.1.1.5; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PRIESTIA MEGATERIUM; SOURCE 3 ORGANISM_TAXID: 1404; SOURCE 4 STRAIN: DSM-32; SOURCE 5 VARIANT: DE BARY 1884; SOURCE 6 ATCC: 14581; SOURCE 7 CELL: BACTERIAL; SOURCE 8 GENE: ILES, BG04_1180; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: B; SOURCE 12 EXPRESSION_SYSTEM_VARIANT: BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_CELL: BACTERIAL; SOURCE 14 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 15 EXPRESSION_SYSTEM_PLASMID: PET28B(+) KEYWDS ANTIBIOTIC, MUPIROCIN-SENSITIVE, ILERS1, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BRKIC,M.LEIBUNDGUT,J.JABLONSKA,V.ZANKI,Z.CAR,V.PETROVIC PEROKOVIC, AUTHOR 2 N.BAN,I.GRUIC-SOVULJ REVDAT 3 27-MAR-24 8C9F 1 JRNL REVDAT 2 13-SEP-23 8C9F 1 JRNL REVDAT 1 16-AUG-23 8C9F 0 JRNL AUTH A.BRKIC,M.LEIBUNDGUT,J.JABLONSKA,V.ZANKI,Z.CAR, JRNL AUTH 2 V.PETROVIC PEROKOVIC,A.MARSAVELSKI,N.BAN,I.GRUIC-SOVULJ JRNL TITL ANTIBIOTIC HYPER-RESISTANCE IN A CLASS I AMINOACYL-TRNA JRNL TITL 2 SYNTHETASE WITH ALTERED ACTIVE SITE SIGNATURE MOTIF. JRNL REF NAT COMMUN V. 14 5498 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37679387 JRNL DOI 10.1038/S41467-023-41244-3 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 25630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.140 REMARK 3 FREE R VALUE TEST SET COUNT : 1830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8100 - 7.2800 1.00 2156 153 0.1872 0.2213 REMARK 3 2 7.2800 - 5.7800 0.99 2032 159 0.2602 0.3203 REMARK 3 3 5.7800 - 5.0500 0.99 2017 159 0.2473 0.2452 REMARK 3 4 5.0500 - 4.5900 0.99 1994 153 0.2208 0.2891 REMARK 3 5 4.5900 - 4.2600 0.97 1965 154 0.2156 0.2395 REMARK 3 6 4.2600 - 4.0100 0.97 1934 142 0.2488 0.2479 REMARK 3 7 4.0100 - 3.8100 0.95 1890 145 0.2663 0.2936 REMARK 3 8 3.8100 - 3.6400 0.94 1869 143 0.2684 0.3225 REMARK 3 9 3.6400 - 3.5000 0.90 1797 142 0.2959 0.3287 REMARK 3 10 3.5000 - 3.3800 0.85 1703 132 0.3191 0.3625 REMARK 3 11 3.3800 - 3.2800 0.81 1596 124 0.3547 0.4496 REMARK 3 12 3.2800 - 3.1800 0.75 1484 109 0.3682 0.4106 REMARK 3 13 3.1800 - 3.1000 0.69 1363 115 0.3888 0.4301 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.475 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.003 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 110.3 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 153.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 7680 REMARK 3 ANGLE : 0.430 10431 REMARK 3 CHIRALITY : 0.040 1128 REMARK 3 PLANARITY : 0.003 1335 REMARK 3 DIHEDRAL : 11.910 2819 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 155) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4850 -23.3132 -8.8623 REMARK 3 T TENSOR REMARK 3 T11: 0.4528 T22: 0.5166 REMARK 3 T33: 1.0136 T12: 0.0113 REMARK 3 T13: -0.5945 T23: 0.1512 REMARK 3 L TENSOR REMARK 3 L11: 0.6098 L22: 0.4382 REMARK 3 L33: 2.0547 L12: 0.0962 REMARK 3 L13: -0.1286 L23: 0.6520 REMARK 3 S TENSOR REMARK 3 S11: -0.2626 S12: -0.3060 S13: -0.1374 REMARK 3 S21: 0.7916 S22: -0.4105 S23: -0.9715 REMARK 3 S31: 0.3199 S32: -0.0830 S33: -0.8225 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): -83.6458 -24.1827 -39.9227 REMARK 3 T TENSOR REMARK 3 T11: 1.0248 T22: 1.2627 REMARK 3 T33: 0.7212 T12: 0.0756 REMARK 3 T13: -0.1801 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 0.6689 L22: 0.8573 REMARK 3 L33: 0.2973 L12: -0.0186 REMARK 3 L13: -0.4270 L23: 0.0798 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: 0.5571 S13: -0.1159 REMARK 3 S21: -0.7589 S22: -0.0901 S23: 0.2256 REMARK 3 S31: 0.1541 S32: -0.0180 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 410 THROUGH 584 ) OR (RESID REMARK 3 156 THROUGH 180)) REMARK 3 ORIGIN FOR THE GROUP (A): -69.6748 -23.8560 -6.9727 REMARK 3 T TENSOR REMARK 3 T11: 0.8927 T22: 0.9120 REMARK 3 T33: 0.5755 T12: -0.0519 REMARK 3 T13: -0.0372 T23: -0.0463 REMARK 3 L TENSOR REMARK 3 L11: 0.9474 L22: 0.6564 REMARK 3 L33: 0.3023 L12: -0.1118 REMARK 3 L13: -0.1132 L23: 0.1327 REMARK 3 S TENSOR REMARK 3 S11: -0.0217 S12: -0.3350 S13: 0.0960 REMARK 3 S21: 0.7895 S22: -0.0530 S23: -0.0599 REMARK 3 S31: -0.0735 S32: -0.2458 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 633 THROUGH 791 ) OR (RESID 1 REMARK 3 THROUGH 19)) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1009 2.9380 -8.7945 REMARK 3 T TENSOR REMARK 3 T11: 0.7086 T22: 0.7685 REMARK 3 T33: 2.5292 T12: -0.3236 REMARK 3 T13: -1.0791 T23: 0.1446 REMARK 3 L TENSOR REMARK 3 L11: 0.6060 L22: 0.5122 REMARK 3 L33: 1.3023 L12: 0.2384 REMARK 3 L13: 0.0627 L23: 0.1741 REMARK 3 S TENSOR REMARK 3 S11: -0.0537 S12: -0.4341 S13: 0.1058 REMARK 3 S21: 0.5816 S22: -0.1441 S23: -1.4365 REMARK 3 S31: -0.1089 S32: 0.5699 S33: -0.9032 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 792 THROUGH 881 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.7649 23.7474 -23.5667 REMARK 3 T TENSOR REMARK 3 T11: 1.3181 T22: 1.6478 REMARK 3 T33: 2.4153 T12: -0.0897 REMARK 3 T13: -0.4049 T23: 0.2897 REMARK 3 L TENSOR REMARK 3 L11: 0.0055 L22: 0.1178 REMARK 3 L33: 0.0345 L12: -0.0340 REMARK 3 L13: -0.0047 L23: -0.0635 REMARK 3 S TENSOR REMARK 3 S11: 0.2456 S12: 0.6366 S13: 0.1039 REMARK 3 S21: 0.0873 S22: 0.2014 S23: -0.6910 REMARK 3 S31: -0.5277 S32: 0.7308 S33: 0.0003 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 882 THROUGH 921 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5537 15.0673 -10.2297 REMARK 3 T TENSOR REMARK 3 T11: 1.5294 T22: 1.5228 REMARK 3 T33: 2.7788 T12: -0.4116 REMARK 3 T13: -0.5859 T23: 0.4250 REMARK 3 L TENSOR REMARK 3 L11: 0.0068 L22: 0.0194 REMARK 3 L33: 0.0063 L12: 0.0182 REMARK 3 L13: -0.0054 L23: -0.0062 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: -0.0774 S13: 0.5421 REMARK 3 S21: 0.3733 S22: -0.1877 S23: -0.4018 REMARK 3 S31: 0.0291 S32: 0.0321 S33: -0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 585 THROUGH 632 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8692 -14.3399 -25.3017 REMARK 3 T TENSOR REMARK 3 T11: 0.7451 T22: 0.7853 REMARK 3 T33: 1.1952 T12: -0.0031 REMARK 3 T13: -0.0711 T23: 0.0718 REMARK 3 L TENSOR REMARK 3 L11: 0.0346 L22: 0.1059 REMARK 3 L33: 0.1158 L12: -0.0250 REMARK 3 L13: -0.0432 L23: -0.0751 REMARK 3 S TENSOR REMARK 3 S11: 0.2497 S12: 0.3425 S13: -0.0318 REMARK 3 S21: -0.6960 S22: -0.3070 S23: -0.3954 REMARK 3 S31: -0.3026 S32: -0.2945 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8C9F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292128101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8-8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000305674358714 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20190806 REMARK 200 DATA SCALING SOFTWARE : XSCALE 20190806 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28199 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 48.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 200 DATA REDUNDANCY : 20.70 REMARK 200 R MERGE (I) : 0.12240 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 21.80 REMARK 200 R MERGE FOR SHELL (I) : 3.73100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER CCP4INTERFACE 7.0.077 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: SINGLE TETRAGONAL CRYSTALS. SUSCEPTIBLE TO CRACKING UPON REMARK 200 TEMPERATURE CHANGE. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5 MM ILE-AMS AND 20 MG/ML MUT-GMHH REMARK 280 -PMILERS1 WERE MIXED IN 1:1 RATIO WITH THE WELL SOLUTION REMARK 280 CONTAINING: 300 MM LITHIUM SULFATE, 150 MM SODIUM SULFATE, AND REMARK 280 15 - 25 % PEG3350, 25 MM HEPES-KOH PH=7.5 AT 20 OC, 50 MM NACL. REMARK 280 THE DROP VOLUME OF 2 MICROLITERS, WAS EQUILIBRATED TOWARDS 300 REMARK 280 MICROLITERS OF THE WELL SOLUTION AT 4 DEGREES., PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.46000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 108.92000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 108.92000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 54.46000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -156.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 6 -138.45 46.66 REMARK 500 ALA A 59 36.75 -99.11 REMARK 500 ALA A 279 -60.87 -93.00 REMARK 500 VAL A 537 -56.95 -125.03 REMARK 500 GLU A 862 55.88 -93.77 REMARK 500 ALA A 867 -118.31 52.17 REMARK 500 GLU A 868 35.99 -140.03 REMARK 500 ALA A 869 -68.16 -94.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 887 SG REMARK 620 2 CYS A 890 SG 108.0 REMARK 620 3 CYS A 907 SG 113.0 107.2 REMARK 620 4 CYS A 910 SG 111.0 106.2 111.1 REMARK 620 N 1 2 3 DBREF1 8C9F A 1 921 UNP A0A0B6A6A8_PRIM2 DBREF2 8C9F A A0A0B6A6A8 1 921 SEQADV 8C9F GLY A 64 UNP A0A0B6A6A HIS 64 ENGINEERED MUTATION SEQADV 8C9F HIS A 66 UNP A0A0B6A6A GLY 66 ENGINEERED MUTATION SEQRES 1 A 921 MET GLU TYR LYS ASP THR LEU LEU MET PRO LYS THR GLU SEQRES 2 A 921 PHE PRO MET ARG GLY ASN LEU PRO ASN ARG GLU PRO LYS SEQRES 3 A 921 MET GLN GLU GLN TRP ALA GLU MET ASN ILE TYR GLU LYS SEQRES 4 A 921 VAL GLN LYS ARG THR GLU GLY ARG PRO LEU PHE VAL LEU SEQRES 5 A 921 HIS ASP GLY PRO PRO TYR ALA ASN GLY ASP ILE GLY MET SEQRES 6 A 921 HIS HIS ALA LEU ASN LYS ILE LEU LYS ASP PHE ILE VAL SEQRES 7 A 921 ARG TYR LYS SER MET SER GLY PHE CYS ALA PRO TYR VAL SEQRES 8 A 921 PRO GLY TRP ASP THR HIS GLY LEU PRO ILE GLU THR ALA SEQRES 9 A 921 LEU THR LYS ASN LYS LYS VAL ASN ARG LYS GLU MET THR SEQRES 10 A 921 VAL ALA GLU PHE ARG LYS LEU CYS GLU GLN TYR ALA TRP SEQRES 11 A 921 GLU GLN VAL ASN GLY GLN ARG GLU GLN PHE LYS ARG LEU SEQRES 12 A 921 GLY VAL ARG GLY ASP TRP ASP ASN PRO TYR VAL THR LEU SEQRES 13 A 921 GLN PRO GLN TYR GLU ALA GLN GLN ILE LYS VAL PHE GLY SEQRES 14 A 921 ASP MET ALA LYS LYS GLY TYR ILE TYR LYS GLY LEU LYS SEQRES 15 A 921 PRO VAL TYR TRP SER PRO SER SER GLU SER ALA LEU ALA SEQRES 16 A 921 GLU ALA GLU ILE GLU TYR TYR ASP LYS ARG SER ALA SER SEQRES 17 A 921 ILE TYR VAL ALA PHE ASN VAL LYS ASP GLY LYS GLY VAL SEQRES 18 A 921 LEU GLU GLN ASP GLU LYS PHE ILE ILE TRP THR THR THR SEQRES 19 A 921 PRO TRP THR MET PRO ALA ASN GLN GLY ILE ALA VAL ASN SEQRES 20 A 921 PRO GLU LEU GLN TYR SER VAL VAL GLU ALA ASP GLY ALA SEQRES 21 A 921 LYS TYR VAL VAL ALA THR GLU LEU ILE GLU THR VAL ALA SEQRES 22 A 921 LYS GLU ILE GLU TRP ALA ASP TYR LYS THR LEU ARG THR SEQRES 23 A 921 VAL LYS GLY SER GLU LEU GLU ARG VAL VAL ALA GLU HIS SEQRES 24 A 921 PRO ILE TYR LYS ARG ASP SER LEU VAL VAL LEU GLY ASP SEQRES 25 A 921 HIS VAL THR THR ASP ALA GLY THR GLY CYS VAL HIS THR SEQRES 26 A 921 ALA PRO GLY HIS GLY GLU ASP ASP PHE ILE VAL GLY GLN SEQRES 27 A 921 LYS TYR GLY LEU GLU VAL LEU CYS PRO VAL ASP SER LYS SEQRES 28 A 921 GLY HIS MET THR ASN GLU ALA PRO GLY PHE GLU GLY LEU SEQRES 29 A 921 PHE TYR ASP LYS ALA ASN LYS PRO ILE THR ASP LYS LEU SEQRES 30 A 921 GLU GLU GLU GLY ALA LEU LEU LYS LEU SER PHE ILE THR SEQRES 31 A 921 HIS SER TYR PRO HIS ASP TRP ARG THR LYS LYS PRO THR SEQRES 32 A 921 ILE PHE ARG ALA THR ALA GLN TRP PHE ALA SER ILE LYS SEQRES 33 A 921 ASP PHE ARG GLU ASP LEU LEU LYS ALA VAL GLU LYS THR SEQRES 34 A 921 LYS TRP VAL PRO THR TRP GLY GLU THR ARG LEU TYR ASN SEQRES 35 A 921 MET VAL ARG ASP ARG GLY ASP TRP CYS ILE SER ARG GLN SEQRES 36 A 921 ARG ALA TRP GLY VAL PRO ILE PRO VAL PHE TYR ALA GLU SEQRES 37 A 921 ASN GLU GLU PRO ILE ILE THR ASP GLU THR ILE GLU HIS SEQRES 38 A 921 VAL SER ASN LEU PHE ARG GLU HIS GLY SER ASN VAL TRP SEQRES 39 A 921 PHE GLU ARG GLU ALA LYS ASP LEU LEU PRO GLU GLY PHE SEQRES 40 A 921 THR HIS GLU GLY SER PRO ASN GLY ARG PHE THR LYS GLU SEQRES 41 A 921 THR ASP ILE MET ASP VAL TRP PHE ASP SER GLY SER SER SEQRES 42 A 921 HIS GLN ALA VAL LEU GLU GLU ARG GLU ASP LEU GLN ARG SEQRES 43 A 921 PRO ALA ASP LEU TYR LEU GLU GLY SER ASP GLN TYR ARG SEQRES 44 A 921 GLY TRP PHE ASN SER SER LEU SER THR SER VAL ALA VAL SEQRES 45 A 921 THR GLY GLU ALA PRO TYR LYS GLY VAL LEU SER HIS GLY SEQRES 46 A 921 PHE ALA LEU ASP GLY GLU GLY ARG LYS MET SER LYS SER SEQRES 47 A 921 LEU GLY ASN VAL VAL ILE PRO GLU LYS VAL MET LYS GLN SEQRES 48 A 921 LEU GLY ALA ASP ILE LEU ARG LEU TRP VAL ALA SER VAL SEQRES 49 A 921 ASP TYR GLN ALA ASP VAL ARG VAL SER ASP ASN ILE LEU SEQRES 50 A 921 LYS GLN VAL ALA GLU VAL TYR ARG LYS ILE ARG ASN THR SEQRES 51 A 921 PHE ARG PHE LEU LEU GLY ASN LEU ALA ASP PHE ASN PRO SEQRES 52 A 921 THR THR ASP ALA VAL ALA VAL GLU ASP LEU ARG GLU VAL SEQRES 53 A 921 ASP ARG TYR MET LEU VAL LYS LEU ASN LYS LEU ILE ASP SEQRES 54 A 921 LYS VAL LYS LYS SER TYR ASP SER TYR GLU PHE SER SER SEQRES 55 A 921 ILE TYR HIS ALA VAL HIS ASN PHE CYS THR ILE ASP MET SEQRES 56 A 921 SER SER PHE TYR LEU ASP PHE ALA LYS ASP VAL LEU TYR SEQRES 57 A 921 ILE GLU ALA GLU ASN ASN VAL GLU ARG ARG SER ILE GLN SEQRES 58 A 921 THR VAL LEU TYR GLU THR LEU LEU SER LEU THR LYS LEU SEQRES 59 A 921 VAL SER PRO ILE LEU SER HIS THR ALA ASP GLU VAL TRP SEQRES 60 A 921 VAL HIS ILE PRO ASN VAL THR GLU GLU SER VAL GLN LEU SEQRES 61 A 921 VAL ASP MET PRO GLU VAL GLN GLU ILE GLU GLY ALA ASP SEQRES 62 A 921 GLN LEU VAL GLU LYS TRP ASP ALA PHE MET GLU LEU ARG SEQRES 63 A 921 ASP GLU VAL LEU LYS ALA LEU GLU GLN ALA ARG ASN GLU SEQRES 64 A 921 LYS VAL ILE GLY LYS SER LEU GLU ALA LYS LEU THR LEU SEQRES 65 A 921 TYR PRO THR ALA ASP THR LYS GLU LEU LEU ALA SER ILE SEQRES 66 A 921 SER GLU ASN VAL GLY GLN LEU PHE ILE VAL SER ASP LEU SEQRES 67 A 921 GLU VAL ALA GLU GLY GLU ALA PRO ALA GLU ALA GLN LYS SEQRES 68 A 921 PHE SER TYR ALA SER ILE VAL VAL SER LYS ALA GLU GLY SEQRES 69 A 921 GLU LYS CYS GLU ARG CYS TRP VAL VAL SER PRO THR VAL SEQRES 70 A 921 GLY GLU ASP GLN ASP HIS PRO THR LEU CYS THR ARG CYS SEQRES 71 A 921 ALA ASP VAL VAL LYS ASN HIS TYR VAL GLN GLN HET ZN A1001 1 HET ILA A1002 31 HET ILA A1003 31 HET SO4 A1004 5 HET SO4 A1005 5 HET SO4 A1006 5 HET SO4 A1007 5 HET CL A1008 1 HET SO4 A1009 5 HET SO4 A1010 5 HET SO4 A1011 5 HET CL A1012 1 HET CL A1013 1 HET CL A1014 1 HET LI A1015 1 HET LI A1016 1 HET NA A1017 1 HET NA A1018 1 HET NA A1019 1 HET NA A1020 1 HETNAM ZN ZINC ION HETNAM ILA N-[ISOLEUCINYL]-N'-[ADENOSYL]-DIAMINOSUFONE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM LI LITHIUM ION HETNAM NA SODIUM ION FORMUL 2 ZN ZN 2+ FORMUL 3 ILA 2(C16 H26 N8 O6 S) FORMUL 5 SO4 7(O4 S 2-) FORMUL 9 CL 4(CL 1-) FORMUL 16 LI 2(LI 1+) FORMUL 18 NA 4(NA 1+) HELIX 1 AA1 ASN A 19 ASN A 35 1 17 HELIX 2 AA2 ASN A 35 THR A 44 1 10 HELIX 3 AA3 GLY A 64 MET A 83 1 20 HELIX 4 AA4 GLY A 98 LYS A 109 1 12 HELIX 5 AA5 ASN A 112 MET A 116 5 5 HELIX 6 AA6 THR A 117 GLY A 144 1 28 HELIX 7 AA7 GLN A 157 LYS A 174 1 18 HELIX 8 AA8 ALA A 195 ALA A 197 5 3 HELIX 9 AA9 THR A 234 ASN A 241 5 8 HELIX 10 AB1 LEU A 268 GLU A 277 1 10 HELIX 11 AB2 SER A 290 GLU A 293 5 4 HELIX 12 AB3 GLY A 330 TYR A 340 1 11 HELIX 13 AB4 ALA A 358 GLU A 362 5 5 HELIX 14 AB5 ALA A 369 GLU A 380 1 12 HELIX 15 AB6 ILE A 415 ASP A 417 5 3 HELIX 16 AB7 PHE A 418 THR A 429 1 12 HELIX 17 AB8 THR A 434 ASP A 446 1 13 HELIX 18 AB9 THR A 475 GLY A 490 1 16 HELIX 19 AC1 SER A 491 ARG A 497 5 7 HELIX 20 AC2 GLU A 498 LEU A 503 1 6 HELIX 21 AC3 ASP A 525 SER A 532 1 8 HELIX 22 AC4 SER A 532 VAL A 537 1 6 HELIX 23 AC5 ASP A 556 ARG A 559 5 4 HELIX 24 AC6 GLY A 560 THR A 573 1 14 HELIX 25 AC7 ILE A 604 LEU A 612 1 9 HELIX 26 AC8 ALA A 614 SER A 623 1 10 HELIX 27 AC9 SER A 633 LEU A 658 1 26 HELIX 28 AD1 ARG A 674 TYR A 698 1 25 HELIX 29 AD2 GLU A 699 ILE A 713 1 15 HELIX 30 AD3 PHE A 718 LYS A 724 1 7 HELIX 31 AD4 ASN A 734 SER A 756 1 23 HELIX 32 AD5 SER A 760 HIS A 769 1 10 HELIX 33 AD6 SER A 777 VAL A 781 5 5 HELIX 34 AD7 GLY A 791 LYS A 820 1 30 HELIX 35 AD8 THR A 835 ILE A 845 1 11 HELIX 36 AD9 ASN A 848 PHE A 853 1 6 HELIX 37 AE1 CYS A 907 ASN A 916 1 10 SHEET 1 AA1 4 LEU A 52 HIS A 53 0 SHEET 2 AA1 4 LEU A 550 GLY A 554 1 O LEU A 550 N HIS A 53 SHEET 3 AA1 4 GLY A 580 HIS A 584 1 O LEU A 582 N TYR A 551 SHEET 4 AA1 4 LYS A 430 VAL A 432 1 N VAL A 432 O VAL A 581 SHEET 1 AA2 2 GLY A 93 TRP A 94 0 SHEET 2 AA2 2 TYR A 153 VAL A 154 1 O TYR A 153 N TRP A 94 SHEET 1 AA3 4 SER A 192 ALA A 193 0 SHEET 2 AA3 4 ILE A 177 SER A 187 -1 N SER A 187 O SER A 192 SHEET 3 AA3 4 ILE A 404 ALA A 413 -1 O PHE A 412 N TYR A 178 SHEET 4 AA3 4 TRP A 450 CYS A 451 -1 O TRP A 450 N ALA A 413 SHEET 1 AA4 9 LYS A 282 LYS A 288 0 SHEET 2 AA4 9 TYR A 252 ALA A 257 -1 N SER A 253 O VAL A 287 SHEET 3 AA4 9 LYS A 261 ALA A 265 -1 O TYR A 262 N GLU A 256 SHEET 4 AA4 9 GLU A 226 THR A 232 1 N LYS A 227 O VAL A 263 SHEET 5 AA4 9 ILE A 199 ASP A 217 -1 N PHE A 213 O PHE A 228 SHEET 6 AA4 9 VAL A 296 GLU A 298 -1 O GLU A 298 N ASN A 214 SHEET 7 AA4 9 ASP A 305 LEU A 310 -1 O SER A 306 N ALA A 297 SHEET 8 AA4 9 GLY A 243 VAL A 246 1 N ILE A 244 O VAL A 309 SHEET 9 AA4 9 VAL A 323 THR A 325 -1 O THR A 325 N GLY A 243 SHEET 1 AA5 6 LYS A 282 LYS A 288 0 SHEET 2 AA5 6 TYR A 252 ALA A 257 -1 N SER A 253 O VAL A 287 SHEET 3 AA5 6 LYS A 261 ALA A 265 -1 O TYR A 262 N GLU A 256 SHEET 4 AA5 6 GLU A 226 THR A 232 1 N LYS A 227 O VAL A 263 SHEET 5 AA5 6 ILE A 199 ASP A 217 -1 N PHE A 213 O PHE A 228 SHEET 6 AA5 6 LEU A 383 ASP A 396 -1 O LEU A 384 N TYR A 210 SHEET 1 AA6 2 SER A 453 ARG A 454 0 SHEET 2 AA6 2 ILE A 523 MET A 524 -1 O ILE A 523 N ARG A 454 SHEET 1 AA7 3 PRO A 472 ILE A 473 0 SHEET 2 AA7 3 PHE A 465 TYR A 466 -1 N PHE A 465 O ILE A 473 SHEET 3 AA7 3 THR A 518 LYS A 519 -1 O THR A 518 N TYR A 466 SHEET 1 AA8 2 ALA A 587 ASP A 589 0 SHEET 2 AA8 2 VAL A 630 VAL A 632 1 O VAL A 632 N LEU A 588 SHEET 1 AA9 4 LEU A 858 VAL A 860 0 SHEET 2 AA9 4 ALA A 828 PRO A 834 1 N LEU A 832 O GLU A 859 SHEET 3 AA9 4 ALA A 875 LYS A 881 -1 O SER A 876 N TYR A 833 SHEET 4 AA9 4 LYS A 871 PHE A 872 -1 N PHE A 872 O ALA A 875 SHEET 1 AB1 2 GLU A 885 LYS A 886 0 SHEET 2 AB1 2 VAL A 893 SER A 894 -1 O SER A 894 N GLU A 885 LINK OE1 GLU A 115 NA NA A1020 1555 1555 2.57 LINK O PHE A 388 LI LI A1015 1555 1555 2.53 LINK OE1 GLU A 642 LI LI A1016 1555 1555 2.45 LINK SG CYS A 887 ZN ZN A1001 1555 1555 2.33 LINK SG CYS A 890 ZN ZN A1001 1555 1555 2.32 LINK SG CYS A 907 ZN ZN A1001 1555 1555 2.33 LINK SG CYS A 910 ZN ZN A1001 1555 1555 2.33 CISPEP 1 VAL A 432 PRO A 433 0 3.62 CISPEP 2 ARG A 546 PRO A 547 0 3.61 CRYST1 127.040 127.040 163.380 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007872 0.004545 0.000000 0.00000 SCALE2 0.000000 0.009089 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006121 0.00000