HEADER HYDROLASE 25-JAN-23 8CB1 TITLE CRYSTAL STRUCTURE OF HUMAN LYSOSOMAL ACID-ALPHA-GLUCOSIDASE, GAA, IN TITLE 2 COMPLEX WITH N-PNT-DNM 15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOSOMAL ALPHA-GLUCOSIDASE (76 KDA); COMPND 3 CHAIN: G; COMPND 4 SYNONYM: ACID MALTASE,AGLUCOSIDASE ALFA; COMPND 5 EC: 3.2.1.20; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: FULL-LENGTH RHGAA HAS BEEN TREATED WITH CHYMOTRYPSIN, COMPND 8 LEADING TO A SAMPLE STARTING AT RESIDUE GLN81. MISSING SURFACE LOOPS COMPND 9 HAVE EQUALLY BEEN REMOVED BY PROTEOLYTIC CLEAVAGE.; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: LYSOSOMAL ALPHA-GLUCOSIDASE (70 KDA); COMPND 12 CHAIN: A; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: FULL-LENGTH RHGAA HAS BEEN TREATED WITH CHYMOTRYPSIN, COMPND 15 LEADING TO A SAMPLE STARTING AT RESIDUE GLN81. MISSING SURFACE LOOPS COMPND 16 HAVE EQUALLY BEEN REMOVED BY PROTEOLYTIC CLEAVAGE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GAA; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: GAA; SOURCE 13 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS GAA, POMPE DISEASE, PHARMACOLOGICAL CHAPERONE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.SULZENBACHER,V.ROIG-ZAMBONI,H.OVERKLEEFT,M.ARTOLA REVDAT 2 15-NOV-23 8CB1 1 REMARK REVDAT 1 13-SEP-23 8CB1 0 JRNL AUTH D.VAN DER GRACHT,R.J.ROWLAND,V.ROIG-ZAMBONI,M.J.FERRAZ, JRNL AUTH 2 M.LOUWERSE,P.P.GEURINK,J.M.F.G.AERTS,G.SULZENBACHER, JRNL AUTH 3 G.J.DAVIES,H.S.OVERKLEEFT,M.ARTOLA JRNL TITL FLUORESCENCE POLARISATION ACTIVITY-BASED PROTEIN PROFILING JRNL TITL 2 FOR THE IDENTIFICATION OF DEOXYNOJIRIMYCIN-TYPE INHIBITORS JRNL TITL 3 SELECTIVE FOR LYSOSOMAL RETAINING ALPHA- AND JRNL TITL 4 BETA-GLUCOSIDASES. JRNL REF CHEM SCI V. 14 9136 2023 JRNL REFN ISSN 2041-6520 JRNL PMID 37655021 JRNL DOI 10.1039/D3SC01021J REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 7.1.015 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 123307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6501 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6660 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 312 REMARK 3 SOLVENT ATOMS : 785 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.074 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.056 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.830 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8CB1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292128136. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98011 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 129900 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 48.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.60 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : 2.06500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 5NN3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M AMMONIUM SULPHATE, 0.1 M HEPES, REMARK 280 2% V/V PEG400, PH 7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.37500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.58950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.30200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.58950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.37500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.30200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY G 116 REMARK 465 LEU G 117 REMARK 465 GLN G 118 REMARK 465 GLY G 119 REMARK 465 ALA G 120 REMARK 465 GLN G 121 REMARK 465 MET G 122 REMARK 465 THR G 197 REMARK 465 PRO G 198 REMARK 465 ARG G 199 REMARK 465 VAL G 200 REMARK 465 HIS G 201 REMARK 465 SER G 202 REMARK 465 ARG G 203 REMARK 465 ALA A 782 REMARK 465 LEU A 783 REMARK 465 GLY A 784 REMARK 465 SER A 785 REMARK 465 LEU A 786 REMARK 465 PRO A 787 REMARK 465 PRO A 788 REMARK 465 PRO A 789 REMARK 465 PRO A 790 REMARK 465 ALA A 791 REMARK 465 ALA A 792 REMARK 465 PRO A 793 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1322 O HOH A 1450 2.00 REMARK 500 OG1 THR A 551 OE1 GLN A 553 2.03 REMARK 500 OE1 GLU A 863 O HOH A 1101 2.05 REMARK 500 O HOH A 1415 O HOH A 1608 2.06 REMARK 500 O HOH A 1613 O HOH A 1699 2.12 REMARK 500 O HOH G 509 O HOH G 531 2.12 REMARK 500 O HOH G 478 O HOH A 1580 2.15 REMARK 500 O HOH A 1514 O HOH A 1690 2.16 REMARK 500 O HOH A 1694 O HOH A 1719 2.18 REMARK 500 OE1 GLN A 553 O HOH A 1102 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER G 135 -145.16 -119.86 REMARK 500 PHE A 241 85.72 -151.64 REMARK 500 LEU A 291 -153.22 -106.66 REMARK 500 ASP A 404 -156.75 -86.81 REMARK 500 ASP A 419 -101.59 -99.60 REMARK 500 ASN A 470 -167.30 -108.54 REMARK 500 VAL A 480 -148.44 -134.64 REMARK 500 SER A 566 -171.90 -172.95 REMARK 500 VAL A 639 67.76 -117.49 REMARK 500 CYS A 647 -3.60 77.37 REMARK 500 PHE A 649 -61.43 -90.53 REMARK 500 GLN A 682 26.50 -141.60 REMARK 500 VAL A 723 -66.32 -97.96 REMARK 500 ALA A 809 67.66 -153.81 REMARK 500 GLU A 863 -11.21 -154.39 REMARK 500 ALA A 872 56.97 -90.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1752 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A1753 DISTANCE = 5.86 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE G 304 REMARK 610 PGE A 1017 DBREF 8CB1 G 81 203 UNP P10253 LYAG_HUMAN 81 203 DBREF 8CB1 A 204 952 UNP P10253 LYAG_HUMAN 204 952 SEQADV 8CB1 ARG G 199 UNP P10253 HIS 199 CONFLICT SEQADV 8CB1 HIS A 223 UNP P10253 ARG 223 CONFLICT SEQADV 8CB1 ILE A 780 UNP P10253 VAL 780 CONFLICT SEQRES 1 G 123 GLN CYS ASP VAL PRO PRO ASN SER ARG PHE ASP CYS ALA SEQRES 2 G 123 PRO ASP LYS ALA ILE THR GLN GLU GLN CYS GLU ALA ARG SEQRES 3 G 123 GLY CYS CYS TYR ILE PRO ALA LYS GLN GLY LEU GLN GLY SEQRES 4 G 123 ALA GLN MET GLY GLN PRO TRP CYS PHE PHE PRO PRO SER SEQRES 5 G 123 TYR PRO SER TYR LYS LEU GLU ASN LEU SER SER SER GLU SEQRES 6 G 123 MET GLY TYR THR ALA THR LEU THR ARG THR THR PRO THR SEQRES 7 G 123 PHE PHE PRO LYS ASP ILE LEU THR LEU ARG LEU ASP VAL SEQRES 8 G 123 MET MET GLU THR GLU ASN ARG LEU HIS PHE THR ILE LYS SEQRES 9 G 123 ASP PRO ALA ASN ARG ARG TYR GLU VAL PRO LEU GLU THR SEQRES 10 G 123 PRO ARG VAL HIS SER ARG SEQRES 1 A 749 ALA PRO SER PRO LEU TYR SER VAL GLU PHE SER GLU GLU SEQRES 2 A 749 PRO PHE GLY VAL ILE VAL HIS ARG GLN LEU ASP GLY ARG SEQRES 3 A 749 VAL LEU LEU ASN THR THR VAL ALA PRO LEU PHE PHE ALA SEQRES 4 A 749 ASP GLN PHE LEU GLN LEU SER THR SER LEU PRO SER GLN SEQRES 5 A 749 TYR ILE THR GLY LEU ALA GLU HIS LEU SER PRO LEU MET SEQRES 6 A 749 LEU SER THR SER TRP THR ARG ILE THR LEU TRP ASN ARG SEQRES 7 A 749 ASP LEU ALA PRO THR PRO GLY ALA ASN LEU TYR GLY SER SEQRES 8 A 749 HIS PRO PHE TYR LEU ALA LEU GLU ASP GLY GLY SER ALA SEQRES 9 A 749 HIS GLY VAL PHE LEU LEU ASN SER ASN ALA MET ASP VAL SEQRES 10 A 749 VAL LEU GLN PRO SER PRO ALA LEU SER TRP ARG SER THR SEQRES 11 A 749 GLY GLY ILE LEU ASP VAL TYR ILE PHE LEU GLY PRO GLU SEQRES 12 A 749 PRO LYS SER VAL VAL GLN GLN TYR LEU ASP VAL VAL GLY SEQRES 13 A 749 TYR PRO PHE MET PRO PRO TYR TRP GLY LEU GLY PHE HIS SEQRES 14 A 749 LEU CYS ARG TRP GLY TYR SER SER THR ALA ILE THR ARG SEQRES 15 A 749 GLN VAL VAL GLU ASN MET THR ARG ALA HIS PHE PRO LEU SEQRES 16 A 749 ASP VAL GLN TRP ASN ASP LEU ASP TYR MET ASP SER ARG SEQRES 17 A 749 ARG ASP PHE THR PHE ASN LYS ASP GLY PHE ARG ASP PHE SEQRES 18 A 749 PRO ALA MET VAL GLN GLU LEU HIS GLN GLY GLY ARG ARG SEQRES 19 A 749 TYR MET MET ILE VAL ASP PRO ALA ILE SER SER SER GLY SEQRES 20 A 749 PRO ALA GLY SER TYR ARG PRO TYR ASP GLU GLY LEU ARG SEQRES 21 A 749 ARG GLY VAL PHE ILE THR ASN GLU THR GLY GLN PRO LEU SEQRES 22 A 749 ILE GLY LYS VAL TRP PRO GLY SER THR ALA PHE PRO ASP SEQRES 23 A 749 PHE THR ASN PRO THR ALA LEU ALA TRP TRP GLU ASP MET SEQRES 24 A 749 VAL ALA GLU PHE HIS ASP GLN VAL PRO PHE ASP GLY MET SEQRES 25 A 749 TRP ILE ASP MET ASN GLU PRO SER ASN PHE ILE ARG GLY SEQRES 26 A 749 SER GLU ASP GLY CYS PRO ASN ASN GLU LEU GLU ASN PRO SEQRES 27 A 749 PRO TYR VAL PRO GLY VAL VAL GLY GLY THR LEU GLN ALA SEQRES 28 A 749 ALA THR ILE CYS ALA SER SER HIS GLN PHE LEU SER THR SEQRES 29 A 749 HIS TYR ASN LEU HIS ASN LEU TYR GLY LEU THR GLU ALA SEQRES 30 A 749 ILE ALA SER HIS ARG ALA LEU VAL LYS ALA ARG GLY THR SEQRES 31 A 749 ARG PRO PHE VAL ILE SER ARG SER THR PHE ALA GLY HIS SEQRES 32 A 749 GLY ARG TYR ALA GLY HIS TRP THR GLY ASP VAL TRP SER SEQRES 33 A 749 SER TRP GLU GLN LEU ALA SER SER VAL PRO GLU ILE LEU SEQRES 34 A 749 GLN PHE ASN LEU LEU GLY VAL PRO LEU VAL GLY ALA ASP SEQRES 35 A 749 VAL CYS GLY PHE LEU GLY ASN THR SER GLU GLU LEU CYS SEQRES 36 A 749 VAL ARG TRP THR GLN LEU GLY ALA PHE TYR PRO PHE MET SEQRES 37 A 749 ARG ASN HIS ASN SER LEU LEU SER LEU PRO GLN GLU PRO SEQRES 38 A 749 TYR SER PHE SER GLU PRO ALA GLN GLN ALA MET ARG LYS SEQRES 39 A 749 ALA LEU THR LEU ARG TYR ALA LEU LEU PRO HIS LEU TYR SEQRES 40 A 749 THR LEU PHE HIS GLN ALA HIS VAL ALA GLY GLU THR VAL SEQRES 41 A 749 ALA ARG PRO LEU PHE LEU GLU PHE PRO LYS ASP SER SER SEQRES 42 A 749 THR TRP THR VAL ASP HIS GLN LEU LEU TRP GLY GLU ALA SEQRES 43 A 749 LEU LEU ILE THR PRO VAL LEU GLN ALA GLY LYS ALA GLU SEQRES 44 A 749 VAL THR GLY TYR PHE PRO LEU GLY THR TRP TYR ASP LEU SEQRES 45 A 749 GLN THR VAL PRO ILE GLU ALA LEU GLY SER LEU PRO PRO SEQRES 46 A 749 PRO PRO ALA ALA PRO ARG GLU PRO ALA ILE HIS SER GLU SEQRES 47 A 749 GLY GLN TRP VAL THR LEU PRO ALA PRO LEU ASP THR ILE SEQRES 48 A 749 ASN VAL HIS LEU ARG ALA GLY TYR ILE ILE PRO LEU GLN SEQRES 49 A 749 GLY PRO GLY LEU THR THR THR GLU SER ARG GLN GLN PRO SEQRES 50 A 749 MET ALA LEU ALA VAL ALA LEU THR LYS GLY GLY GLU ALA SEQRES 51 A 749 ARG GLY GLU LEU PHE TRP ASP ASP GLY GLU SER LEU GLU SEQRES 52 A 749 VAL LEU GLU ARG GLY ALA TYR THR GLN VAL ILE PHE LEU SEQRES 53 A 749 ALA ARG ASN ASN THR ILE VAL ASN GLU LEU VAL ARG VAL SEQRES 54 A 749 THR SER GLU GLY ALA GLY LEU GLN LEU GLN LYS VAL THR SEQRES 55 A 749 VAL LEU GLY VAL ALA THR ALA PRO GLN GLN VAL LEU SER SEQRES 56 A 749 ASN GLY VAL PRO VAL SER ASN PHE THR TYR SER PRO ASP SEQRES 57 A 749 THR LYS VAL LEU ASP ILE CSO VAL SER LEU LEU MET GLY SEQRES 58 A 749 GLU GLN PHE LEU VAL SER TRP CYS MODRES 8CB1 CSO A 938 CYS MODIFIED RESIDUE HET CSO A 938 7 HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET FUC F 3 10 HET CL G 301 1 HET CL G 302 1 HET GOL G 303 6 HET PGE G 304 7 HET EDO G 305 4 HET EDO G 306 4 HET U4X A1001 32 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 A1004 5 HET SO4 A1005 5 HET CL A1006 1 HET CL A1007 1 HET CL A1008 1 HET CL A1009 1 HET CL A1010 1 HET CL A1011 1 HET CL A1012 1 HET CL A1013 1 HET GOL A1014 6 HET GOL A1015 6 HET GOL A1016 6 HET PGE A1017 7 HET PGE A1018 10 HET EDO A1019 4 HET EDO A1020 4 HET EDO A1021 4 HETNAM CSO S-HYDROXYCYSTEINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM U4X (2R,3R,4R,5S)-2-(HYDROXYMETHYL)-1-[5-(PHENANTHREN-9- HETNAM 2 U4X YLMETHOXY)PENTYL]PIPERIDINE-3,4,5-TRIOL HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CSO C3 H7 N O3 S FORMUL 3 NAG 10(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 8 CL 10(CL 1-) FORMUL 10 GOL 4(C3 H8 O3) FORMUL 11 PGE 3(C6 H14 O4) FORMUL 12 EDO 5(C2 H6 O2) FORMUL 14 U4X C26 H33 N O5 FORMUL 15 SO4 4(O4 S 2-) FORMUL 35 HOH *785(H2 O) HELIX 1 AA1 PRO G 85 ARG G 89 5 5 HELIX 2 AA2 THR G 99 ARG G 106 1 8 HELIX 3 AA3 THR A 235 ALA A 237 5 3 HELIX 4 AA4 GLU A 346 GLY A 359 1 14 HELIX 5 AA5 PRO A 365 GLY A 370 5 6 HELIX 6 AA6 SER A 380 ALA A 394 1 15 HELIX 7 AA7 ASP A 404 MET A 408 5 5 HELIX 8 AA8 ASP A 423 GLY A 434 1 12 HELIX 9 AA9 TYR A 455 GLY A 465 1 11 HELIX 10 AB1 ASN A 492 VAL A 510 1 19 HELIX 11 AB2 THR A 567 HIS A 572 1 6 HELIX 12 AB3 LEU A 574 GLY A 592 1 19 HELIX 13 AB4 GLY A 605 TYR A 609 5 5 HELIX 14 AB5 SER A 620 LEU A 637 1 18 HELIX 15 AB6 SER A 654 ALA A 666 1 13 HELIX 16 AB7 GLU A 683 PHE A 687 5 5 HELIX 17 AB8 SER A 688 GLY A 720 1 33 HELIX 18 AB9 PRO A 726 PHE A 731 1 6 HELIX 19 AC1 ASP A 734 TRP A 738 5 5 HELIX 20 AC2 GLN A 776 VAL A 778 5 3 HELIX 21 AC3 THR A 832 ARG A 837 1 6 HELIX 22 AC4 GLU A 866 GLY A 871 1 6 SHEET 1 AA1 2 CYS G 109 TYR G 110 0 SHEET 2 AA1 2 CYS G 127 PHE G 128 -1 O PHE G 128 N CYS G 109 SHEET 1 AA2 8 LYS G 137 SER G 143 0 SHEET 2 AA2 8 GLY G 147 THR G 153 -1 O THR G 151 N GLU G 139 SHEET 3 AA2 8 THR G 166 THR G 175 -1 O VAL G 171 N TYR G 148 SHEET 4 AA2 8 ARG G 178 LYS G 184 -1 O HIS G 180 N MET G 172 SHEET 5 AA2 8 LEU A 337 PHE A 342 -1 O VAL A 339 N PHE G 181 SHEET 6 AA2 8 ALA A 307 LEU A 312 -1 N GLY A 309 O PHE A 342 SHEET 7 AA2 8 PHE A 297 LEU A 301 -1 N ALA A 300 O HIS A 308 SHEET 8 AA2 8 ILE A 257 GLY A 259 -1 N THR A 258 O LEU A 299 SHEET 1 AA3 3 TYR A 209 SER A 214 0 SHEET 2 AA3 3 GLY A 219 ARG A 224 -1 O ILE A 221 N GLU A 212 SHEET 3 AA3 3 VAL A 230 ASN A 233 -1 O LEU A 232 N VAL A 222 SHEET 1 AA4 5 PHE A 240 ALA A 242 0 SHEET 2 AA4 5 PHE A 245 SER A 251 -1 O PHE A 245 N ALA A 242 SHEET 3 AA4 5 ALA A 327 SER A 332 -1 O TRP A 330 N LEU A 248 SHEET 4 AA4 5 MET A 318 GLN A 323 -1 N GLN A 323 O ALA A 327 SHEET 5 AA4 5 THR A 274 LEU A 278 -1 N ILE A 276 O VAL A 320 SHEET 1 AA5 8 VAL A 642 GLY A 643 0 SHEET 2 AA5 8 GLY A 611 TRP A 613 1 N HIS A 612 O GLY A 643 SHEET 3 AA5 8 VAL A 597 SER A 599 1 N VAL A 597 O GLY A 611 SHEET 4 AA5 8 MET A 515 ILE A 517 1 N ILE A 517 O ILE A 598 SHEET 5 AA5 8 ARG A 437 VAL A 442 1 N VAL A 442 O TRP A 516 SHEET 6 AA5 8 VAL A 400 ASN A 403 1 N GLN A 401 O ARG A 437 SHEET 7 AA5 8 HIS A 372 LEU A 373 1 N LEU A 373 O TRP A 402 SHEET 8 AA5 8 ARG A 672 ASN A 673 1 O ASN A 673 N HIS A 372 SHEET 1 AA6 3 ILE A 446 SER A 447 0 SHEET 2 AA6 3 GLY A 483 ALA A 486 -1 O ALA A 486 N ILE A 446 SHEET 3 AA6 3 GLY A 478 VAL A 480 -1 N GLY A 478 O THR A 485 SHEET 1 AA7 6 ALA A 724 ARG A 725 0 SHEET 2 AA7 6 LEU A 744 TRP A 746 -1 O LEU A 745 N ARG A 725 SHEET 3 AA7 6 LEU A 750 THR A 753 -1 O ILE A 752 N LEU A 744 SHEET 4 AA7 6 ASN A 815 ARG A 819 -1 O HIS A 817 N LEU A 751 SHEET 5 AA7 6 GLY A 770 ASP A 774 -1 N TYR A 773 O LEU A 818 SHEET 6 AA7 6 ALA A 797 SER A 800 -1 O ILE A 798 N TRP A 772 SHEET 1 AA8 2 GLU A 762 PHE A 767 0 SHEET 2 AA8 2 GLN A 803 PRO A 808 -1 O LEU A 807 N VAL A 763 SHEET 1 AA911 VAL A 921 PRO A 922 0 SHEET 2 AA911 VAL A 916 SER A 918 -1 N SER A 918 O VAL A 921 SHEET 3 AA911 LEU A 948 TRP A 951 -1 O SER A 950 N LEU A 917 SHEET 4 AA911 THR A 884 ARG A 891 -1 N ILE A 885 O VAL A 949 SHEET 5 AA911 THR A 874 ARG A 881 -1 N ILE A 877 O GLU A 888 SHEET 6 AA911 ALA A 853 TRP A 859 -1 N TRP A 859 O THR A 874 SHEET 7 AA911 TYR A 822 GLN A 827 1 N ILE A 823 O ARG A 854 SHEET 8 AA911 MET A 841 ALA A 846 -1 O ALA A 846 N TYR A 822 SHEET 9 AA911 GLN A 900 LEU A 907 1 O GLN A 900 N MET A 841 SHEET 10 AA911 VAL A 934 LEU A 942 -1 O LEU A 935 N VAL A 906 SHEET 11 AA911 PHE A 926 SER A 929 -1 N THR A 927 O ASP A 936 SSBOND 1 CYS G 82 CYS G 109 1555 1555 2.11 SSBOND 2 CYS G 92 CYS G 108 1555 1555 1.94 SSBOND 3 CYS G 103 CYS G 127 1555 1555 2.15 SSBOND 4 CYS A 533 CYS A 558 1555 1555 2.17 SSBOND 5 CYS A 647 CYS A 658 1555 1555 2.02 LINK ND2 ASN G 140 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 233 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 390 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN A 470 C1 NAG E 1 1555 1555 1.46 LINK ND2 ASN A 652 C1 NAG F 1 1555 1555 1.42 LINK C ILE A 937 N CSO A 938 1555 1555 1.33 LINK C CSO A 938 N VAL A 939 1555 1555 1.34 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.46 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.42 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.45 LINK O6 NAG F 1 C1 FUC F 3 1555 1555 1.45 CISPEP 1 GLU A 216 PRO A 217 0 0.17 CISPEP 2 ALA A 261 GLU A 262 0 4.52 CISPEP 3 SER A 325 PRO A 326 0 2.19 CISPEP 4 GLY A 344 PRO A 345 0 4.74 CISPEP 5 GLU A 521 PRO A 522 0 -3.78 CRYST1 96.750 102.604 129.179 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010336 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009746 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007741 0.00000