HEADER LIPID TRANSPORT 01-FEB-23 8CDY TITLE N-TERMINAL DOMAIN OF HUMAN APOLIPOPROTEIN E COMPND MOL_ID: 1; COMPND 2 MOLECULE: MALTODEXTRIN-BINDING PROTEIN,APOLIPOPROTEIN E; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: APO-E; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI, HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 562, 9606; SOURCE 5 GENE: MALE, NCTC8450_00456, NCTC9775_03059, APOE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS APOLIPOPROTEIN E, N-TERMINAL DOMAIN, LIPID TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR M.MAREK,M.NEMERGUT REVDAT 1 19-JUL-23 8CDY 0 JRNL AUTH M.NEMERGUT,S.M.MARQUES,L.UHRIK,T.VANOVA,M.NEZVEDOVA, JRNL AUTH 2 D.C.GADARA,D.JHA,J.TULIS,V.NOVAKOVA,J.PLANAS-IGLESIAS, JRNL AUTH 3 A.KUNKA,A.LEGRAND,H.HRIBKOVA,V.POSPISILOVA,J.SEDMIK,J.RASKA, JRNL AUTH 4 Z.PROKOP,J.DAMBORSKY,D.BOHACIAKOVA,Z.SPACIL,L.HERNYCHOVA, JRNL AUTH 5 D.BEDNAR,M.MAREK JRNL TITL DOMINO-LIKE EFFECT OF C112R MUTATION ON APOE4 AGGREGATION JRNL TITL 2 AND ITS REDUCTION BY ALZHEIMER'S DISEASE DRUG CANDIDATE. JRNL REF MOL NEURODEGENER V. 18 38 2023 JRNL REFN ISSN 1750-1326 JRNL PMID 37280636 JRNL DOI 10.1186/S13024-023-00620-9 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 13449 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 655 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5910 - 3.2458 1.00 2868 157 0.1899 0.1878 REMARK 3 2 3.2458 - 2.5764 1.00 2751 126 0.2381 0.3046 REMARK 3 3 2.5764 - 2.2508 1.00 2716 145 0.2192 0.2616 REMARK 3 4 2.2508 - 2.0450 0.96 2610 107 0.2313 0.2826 REMARK 3 5 2.0450 - 1.9000 0.70 1849 120 0.2967 0.2890 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1213 REMARK 3 ANGLE : 0.695 1631 REMARK 3 CHIRALITY : 0.035 178 REMARK 3 PLANARITY : 0.003 215 REMARK 3 DIHEDRAL : 8.062 1062 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.5898 42.0441 49.6247 REMARK 3 T TENSOR REMARK 3 T11: 0.3144 T22: 0.2995 REMARK 3 T33: 0.3089 T12: -0.0036 REMARK 3 T13: -0.0295 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.1447 L22: 1.7563 REMARK 3 L33: 0.3997 L12: -0.5248 REMARK 3 L13: 0.4155 L23: 0.0032 REMARK 3 S TENSOR REMARK 3 S11: -0.1442 S12: -0.0772 S13: -0.0296 REMARK 3 S21: 0.3228 S22: -0.0152 S23: -0.1396 REMARK 3 S31: -0.0899 S32: -0.0624 S33: -0.0134 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CDY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1292128363. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13501 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 42.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, PEG 6000, PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.78350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.28850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.51250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.28850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.78350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.51250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -375 REMARK 465 PRO A -374 REMARK 465 MET A -373 REMARK 465 LYS A -372 REMARK 465 ILE A -371 REMARK 465 GLU A -370 REMARK 465 GLU A -369 REMARK 465 GLY A -368 REMARK 465 LYS A -367 REMARK 465 LEU A -366 REMARK 465 VAL A -365 REMARK 465 ILE A -364 REMARK 465 TRP A -363 REMARK 465 ILE A -362 REMARK 465 ASN A -361 REMARK 465 GLY A -360 REMARK 465 ASP A -359 REMARK 465 LYS A -358 REMARK 465 GLY A -357 REMARK 465 TYR A -356 REMARK 465 ASN A -355 REMARK 465 GLY A -354 REMARK 465 LEU A -353 REMARK 465 ALA A -352 REMARK 465 GLU A -351 REMARK 465 VAL A -350 REMARK 465 GLY A -349 REMARK 465 LYS A -348 REMARK 465 LYS A -347 REMARK 465 PHE A -346 REMARK 465 GLU A -345 REMARK 465 LYS A -344 REMARK 465 ASP A -343 REMARK 465 THR A -342 REMARK 465 GLY A -341 REMARK 465 ILE A -340 REMARK 465 LYS A -339 REMARK 465 VAL A -338 REMARK 465 THR A -337 REMARK 465 VAL A -336 REMARK 465 GLU A -335 REMARK 465 HIS A -334 REMARK 465 PRO A -333 REMARK 465 ASP A -332 REMARK 465 LYS A -331 REMARK 465 LEU A -330 REMARK 465 GLU A -329 REMARK 465 GLU A -328 REMARK 465 LYS A -327 REMARK 465 PHE A -326 REMARK 465 PRO A -325 REMARK 465 GLN A -324 REMARK 465 VAL A -323 REMARK 465 ALA A -322 REMARK 465 ALA A -321 REMARK 465 THR A -320 REMARK 465 GLY A -319 REMARK 465 ASP A -318 REMARK 465 GLY A -317 REMARK 465 PRO A -316 REMARK 465 ASP A -315 REMARK 465 ILE A -314 REMARK 465 ILE A -313 REMARK 465 PHE A -312 REMARK 465 TRP A -311 REMARK 465 ALA A -310 REMARK 465 HIS A -309 REMARK 465 ASP A -308 REMARK 465 ARG A -307 REMARK 465 PHE A -306 REMARK 465 GLY A -305 REMARK 465 GLY A -304 REMARK 465 TYR A -303 REMARK 465 ALA A -302 REMARK 465 GLN A -301 REMARK 465 SER A -300 REMARK 465 GLY A -299 REMARK 465 LEU A -298 REMARK 465 LEU A -297 REMARK 465 ALA A -296 REMARK 465 GLU A -295 REMARK 465 ILE A -294 REMARK 465 THR A -293 REMARK 465 PRO A -292 REMARK 465 ALA A -291 REMARK 465 ALA A -290 REMARK 465 ALA A -289 REMARK 465 PHE A -288 REMARK 465 GLN A -287 REMARK 465 ASP A -286 REMARK 465 LYS A -285 REMARK 465 LEU A -284 REMARK 465 TYR A -283 REMARK 465 PRO A -282 REMARK 465 PHE A -281 REMARK 465 THR A -280 REMARK 465 TRP A -279 REMARK 465 ASP A -278 REMARK 465 ALA A -277 REMARK 465 VAL A -276 REMARK 465 ARG A -275 REMARK 465 TYR A -274 REMARK 465 ASN A -273 REMARK 465 GLY A -272 REMARK 465 LYS A -271 REMARK 465 LEU A -270 REMARK 465 ILE A -269 REMARK 465 ALA A -268 REMARK 465 TYR A -267 REMARK 465 PRO A -266 REMARK 465 ILE A -265 REMARK 465 ALA A -264 REMARK 465 VAL A -263 REMARK 465 GLU A -262 REMARK 465 ALA A -261 REMARK 465 LEU A -260 REMARK 465 SER A -259 REMARK 465 LEU A -258 REMARK 465 ILE A -257 REMARK 465 TYR A -256 REMARK 465 ASN A -255 REMARK 465 LYS A -254 REMARK 465 ASP A -253 REMARK 465 LEU A -252 REMARK 465 LEU A -251 REMARK 465 PRO A -250 REMARK 465 ASN A -249 REMARK 465 PRO A -248 REMARK 465 PRO A -247 REMARK 465 LYS A -246 REMARK 465 THR A -245 REMARK 465 TRP A -244 REMARK 465 GLU A -243 REMARK 465 GLU A -242 REMARK 465 ILE A -241 REMARK 465 PRO A -240 REMARK 465 ALA A -239 REMARK 465 LEU A -238 REMARK 465 ASP A -237 REMARK 465 LYS A -236 REMARK 465 GLU A -235 REMARK 465 LEU A -234 REMARK 465 LYS A -233 REMARK 465 ALA A -232 REMARK 465 LYS A -231 REMARK 465 GLY A -230 REMARK 465 LYS A -229 REMARK 465 SER A -228 REMARK 465 ALA A -227 REMARK 465 LEU A -226 REMARK 465 MET A -225 REMARK 465 PHE A -224 REMARK 465 ASN A -223 REMARK 465 LEU A -222 REMARK 465 GLN A -221 REMARK 465 GLU A -220 REMARK 465 PRO A -219 REMARK 465 TYR A -218 REMARK 465 PHE A -217 REMARK 465 THR A -216 REMARK 465 TRP A -215 REMARK 465 PRO A -214 REMARK 465 LEU A -213 REMARK 465 ILE A -212 REMARK 465 ALA A -211 REMARK 465 ALA A -210 REMARK 465 ASP A -209 REMARK 465 GLY A -208 REMARK 465 GLY A -207 REMARK 465 TYR A -206 REMARK 465 ALA A -205 REMARK 465 PHE A -204 REMARK 465 LYS A -203 REMARK 465 TYR A -202 REMARK 465 GLU A -201 REMARK 465 ASN A -200 REMARK 465 GLY A -199 REMARK 465 LYS A -198 REMARK 465 TYR A -197 REMARK 465 ASP A -196 REMARK 465 ILE A -195 REMARK 465 LYS A -194 REMARK 465 ASP A -193 REMARK 465 VAL A -192 REMARK 465 GLY A -191 REMARK 465 VAL A -190 REMARK 465 ASP A -189 REMARK 465 ASN A -188 REMARK 465 ALA A -187 REMARK 465 GLY A -186 REMARK 465 ALA A -185 REMARK 465 LYS A -184 REMARK 465 ALA A -183 REMARK 465 GLY A -182 REMARK 465 LEU A -181 REMARK 465 THR A -180 REMARK 465 PHE A -179 REMARK 465 LEU A -178 REMARK 465 VAL A -177 REMARK 465 ASP A -176 REMARK 465 LEU A -175 REMARK 465 ILE A -174 REMARK 465 LYS A -173 REMARK 465 ASN A -172 REMARK 465 LYS A -171 REMARK 465 HIS A -170 REMARK 465 MET A -169 REMARK 465 ASN A -168 REMARK 465 ALA A -167 REMARK 465 ASP A -166 REMARK 465 THR A -165 REMARK 465 ASP A -164 REMARK 465 TYR A -163 REMARK 465 SER A -162 REMARK 465 ILE A -161 REMARK 465 ALA A -160 REMARK 465 GLU A -159 REMARK 465 ALA A -158 REMARK 465 ALA A -157 REMARK 465 PHE A -156 REMARK 465 ASN A -155 REMARK 465 LYS A -154 REMARK 465 GLY A -153 REMARK 465 GLU A -152 REMARK 465 THR A -151 REMARK 465 ALA A -150 REMARK 465 MET A -149 REMARK 465 THR A -148 REMARK 465 ILE A -147 REMARK 465 ASN A -146 REMARK 465 GLY A -145 REMARK 465 PRO A -144 REMARK 465 TRP A -143 REMARK 465 ALA A -142 REMARK 465 TRP A -141 REMARK 465 SER A -140 REMARK 465 ASN A -139 REMARK 465 ILE A -138 REMARK 465 ASP A -137 REMARK 465 THR A -136 REMARK 465 SER A -135 REMARK 465 ALA A -134 REMARK 465 VAL A -133 REMARK 465 ASN A -132 REMARK 465 TYR A -131 REMARK 465 GLY A -130 REMARK 465 VAL A -129 REMARK 465 THR A -128 REMARK 465 VAL A -127 REMARK 465 LEU A -126 REMARK 465 PRO A -125 REMARK 465 THR A -124 REMARK 465 PHE A -123 REMARK 465 LYS A -122 REMARK 465 GLY A -121 REMARK 465 GLN A -120 REMARK 465 PRO A -119 REMARK 465 SER A -118 REMARK 465 LYS A -117 REMARK 465 PRO A -116 REMARK 465 PHE A -115 REMARK 465 VAL A -114 REMARK 465 GLY A -113 REMARK 465 VAL A -112 REMARK 465 LEU A -111 REMARK 465 SER A -110 REMARK 465 ALA A -109 REMARK 465 GLY A -108 REMARK 465 ILE A -107 REMARK 465 ASN A -106 REMARK 465 ALA A -105 REMARK 465 ALA A -104 REMARK 465 SER A -103 REMARK 465 PRO A -102 REMARK 465 ASN A -101 REMARK 465 LYS A -100 REMARK 465 GLU A -99 REMARK 465 LEU A -98 REMARK 465 ALA A -97 REMARK 465 LYS A -96 REMARK 465 GLU A -95 REMARK 465 PHE A -94 REMARK 465 LEU A -93 REMARK 465 GLU A -92 REMARK 465 ASN A -91 REMARK 465 TYR A -90 REMARK 465 LEU A -89 REMARK 465 LEU A -88 REMARK 465 THR A -87 REMARK 465 ASP A -86 REMARK 465 GLU A -85 REMARK 465 GLY A -84 REMARK 465 LEU A -83 REMARK 465 GLU A -82 REMARK 465 ALA A -81 REMARK 465 VAL A -80 REMARK 465 ASN A -79 REMARK 465 LYS A -78 REMARK 465 ASP A -77 REMARK 465 LYS A -76 REMARK 465 PRO A -75 REMARK 465 LEU A -74 REMARK 465 GLY A -73 REMARK 465 ALA A -72 REMARK 465 VAL A -71 REMARK 465 ALA A -70 REMARK 465 LEU A -69 REMARK 465 LYS A -68 REMARK 465 SER A -67 REMARK 465 TYR A -66 REMARK 465 GLU A -65 REMARK 465 GLU A -64 REMARK 465 GLU A -63 REMARK 465 LEU A -62 REMARK 465 ALA A -61 REMARK 465 LYS A -60 REMARK 465 ASP A -59 REMARK 465 PRO A -58 REMARK 465 ARG A -57 REMARK 465 ILE A -56 REMARK 465 ALA A -55 REMARK 465 ALA A -54 REMARK 465 THR A -53 REMARK 465 MET A -52 REMARK 465 GLU A -51 REMARK 465 ASN A -50 REMARK 465 ALA A -49 REMARK 465 GLN A -48 REMARK 465 LYS A -47 REMARK 465 GLY A -46 REMARK 465 GLU A -45 REMARK 465 ILE A -44 REMARK 465 MET A -43 REMARK 465 PRO A -42 REMARK 465 ASN A -41 REMARK 465 ILE A -40 REMARK 465 PRO A -39 REMARK 465 GLN A -38 REMARK 465 MET A -37 REMARK 465 SER A -36 REMARK 465 ALA A -35 REMARK 465 PHE A -34 REMARK 465 TRP A -33 REMARK 465 TYR A -32 REMARK 465 ALA A -31 REMARK 465 VAL A -30 REMARK 465 ARG A -29 REMARK 465 THR A -28 REMARK 465 ALA A -27 REMARK 465 VAL A -26 REMARK 465 ILE A -25 REMARK 465 ASN A -24 REMARK 465 ALA A -23 REMARK 465 ALA A -22 REMARK 465 SER A -21 REMARK 465 GLY A -20 REMARK 465 ARG A -19 REMARK 465 GLN A -18 REMARK 465 THR A -17 REMARK 465 VAL A -16 REMARK 465 ASP A -15 REMARK 465 ALA A -14 REMARK 465 ALA A -13 REMARK 465 LEU A -12 REMARK 465 ALA A -11 REMARK 465 ALA A -10 REMARK 465 ALA A -9 REMARK 465 GLN A -8 REMARK 465 THR A -7 REMARK 465 ASN A -6 REMARK 465 ALA A -5 REMARK 465 ALA A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 LYS A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 GLU A 7 REMARK 465 THR A 8 REMARK 465 GLU A 9 REMARK 465 PRO A 10 REMARK 465 GLU A 11 REMARK 465 PRO A 12 REMARK 465 GLU A 13 REMARK 465 LEU A 14 REMARK 465 ARG A 15 REMARK 465 GLN A 16 REMARK 465 GLN A 17 REMARK 465 THR A 18 REMARK 465 GLU A 19 REMARK 465 TRP A 20 REMARK 465 GLN A 21 REMARK 465 SER A 22 REMARK 465 ALA A 166 REMARK 465 ARG A 167 REMARK 465 GLU A 168 REMARK 465 GLY A 169 REMARK 465 ALA A 170 REMARK 465 GLU A 171 REMARK 465 ARG A 172 REMARK 465 GLY A 173 REMARK 465 LEU A 174 REMARK 465 SER A 175 REMARK 465 ALA A 176 REMARK 465 ILE A 177 REMARK 465 ARG A 178 REMARK 465 GLU A 179 REMARK 465 ARG A 180 REMARK 465 LEU A 181 REMARK 465 GLY A 182 REMARK 465 PRO A 183 REMARK 465 LEU A 184 REMARK 465 VAL A 185 REMARK 465 GLU A 186 REMARK 465 GLN A 187 REMARK 465 GLY A 188 REMARK 465 ARG A 189 REMARK 465 VAL A 190 REMARK 465 ARG A 191 REMARK 465 ALA A 192 REMARK 465 ALA A 193 REMARK 465 THR A 194 REMARK 465 VAL A 195 REMARK 465 GLY A 196 REMARK 465 SER A 197 REMARK 465 LEU A 198 REMARK 465 ALA A 199 REMARK 465 GLY A 200 REMARK 465 GLN A 201 REMARK 465 PRO A 202 REMARK 465 LEU A 203 REMARK 465 GLN A 204 REMARK 465 GLU A 205 REMARK 465 ARG A 206 REMARK 465 ALA A 207 REMARK 465 GLN A 208 REMARK 465 ALA A 209 REMARK 465 TRP A 210 REMARK 465 GLY A 211 REMARK 465 GLU A 212 REMARK 465 ARG A 213 REMARK 465 LEU A 214 REMARK 465 ARG A 215 REMARK 465 ALA A 216 REMARK 465 ARG A 217 REMARK 465 MET A 218 REMARK 465 GLU A 219 REMARK 465 GLU A 220 REMARK 465 MET A 221 REMARK 465 GLY A 222 REMARK 465 SER A 223 REMARK 465 ARG A 224 REMARK 465 THR A 225 REMARK 465 ARG A 226 REMARK 465 ASP A 227 REMARK 465 ARG A 228 REMARK 465 LEU A 229 REMARK 465 ASP A 230 REMARK 465 GLU A 231 REMARK 465 VAL A 232 REMARK 465 LYS A 233 REMARK 465 GLU A 234 REMARK 465 GLN A 235 REMARK 465 VAL A 236 REMARK 465 ALA A 237 REMARK 465 GLU A 238 REMARK 465 VAL A 239 REMARK 465 ARG A 240 REMARK 465 ALA A 241 REMARK 465 LYS A 242 REMARK 465 LEU A 243 REMARK 465 GLU A 244 REMARK 465 GLU A 245 REMARK 465 GLN A 246 REMARK 465 ALA A 247 REMARK 465 GLN A 248 REMARK 465 GLN A 249 REMARK 465 ILE A 250 REMARK 465 ARG A 251 REMARK 465 LEU A 252 REMARK 465 GLN A 253 REMARK 465 ALA A 254 REMARK 465 GLU A 255 REMARK 465 ALA A 256 REMARK 465 ALA A 257 REMARK 465 GLN A 258 REMARK 465 ALA A 259 REMARK 465 ARG A 260 REMARK 465 LEU A 261 REMARK 465 LYS A 262 REMARK 465 SER A 263 REMARK 465 ARG A 264 REMARK 465 PHE A 265 REMARK 465 GLU A 266 REMARK 465 PRO A 267 REMARK 465 LEU A 268 REMARK 465 ALA A 269 REMARK 465 GLU A 270 REMARK 465 ASP A 271 REMARK 465 MET A 272 REMARK 465 GLN A 273 REMARK 465 ARG A 274 REMARK 465 GLN A 275 REMARK 465 TRP A 276 REMARK 465 ALA A 277 REMARK 465 GLY A 278 REMARK 465 GLN A 279 REMARK 465 VAL A 280 REMARK 465 GLU A 281 REMARK 465 LYS A 282 REMARK 465 VAL A 283 REMARK 465 GLN A 284 REMARK 465 ALA A 285 REMARK 465 ALA A 286 REMARK 465 GLU A 287 REMARK 465 GLY A 288 REMARK 465 THR A 289 REMARK 465 SER A 290 REMARK 465 ALA A 291 REMARK 465 ALA A 292 REMARK 465 PRO A 293 REMARK 465 VAL A 294 REMARK 465 PRO A 295 REMARK 465 SER A 296 REMARK 465 ASP A 297 REMARK 465 ASN A 298 REMARK 465 HIS A 299 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 85 -166.92 -119.69 REMARK 500 ALA A 86 4.25 -63.58 REMARK 500 GLU A 87 -51.33 64.51 REMARK 500 GLU A 88 -74.99 -21.82 REMARK 500 LEU A 126 -124.97 57.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 87 GLU A 88 145.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 364 DISTANCE = 6.20 ANGSTROMS DBREF1 8CDY A -372 -7 UNP A0A376KDN7_ECOLX DBREF2 8CDY A A0A376KDN7 27 392 DBREF 8CDY A 1 299 UNP P02649 APOE_HUMAN 19 317 SEQADV 8CDY GLY A -375 UNP A0A376KDN EXPRESSION TAG SEQADV 8CDY PRO A -374 UNP A0A376KDN EXPRESSION TAG SEQADV 8CDY MET A -373 UNP A0A376KDN EXPRESSION TAG SEQADV 8CDY ALA A -291 UNP A0A376KDN ASP 108 CONFLICT SEQADV 8CDY ALA A -290 UNP A0A376KDN LYS 109 CONFLICT SEQADV 8CDY ALA A -134 UNP A0A376KDN LYS 265 CONFLICT SEQADV 8CDY ALA A -11 UNP A0A376KDN LYS 388 CONFLICT SEQADV 8CDY ALA A -10 UNP A0A376KDN ASP 389 CONFLICT SEQADV 8CDY ASN A -6 UNP A0A376KDN LINKER SEQADV 8CDY ALA A -5 UNP A0A376KDN LINKER SEQADV 8CDY ALA A -4 UNP A0A376KDN LINKER SEQADV 8CDY ALA A -3 UNP A0A376KDN LINKER SEQADV 8CDY ALA A -2 UNP A0A376KDN LINKER SEQADV 8CDY HIS A -1 UNP A0A376KDN LINKER SEQADV 8CDY MET A 0 UNP A0A376KDN LINKER SEQADV 8CDY ARG A 112 UNP P02649 CYS 130 CONFLICT SEQADV 8CDY ALA A 257 UNP P02649 PHE 275 CONFLICT SEQADV 8CDY ARG A 264 UNP P02649 TRP 282 CONFLICT SEQADV 8CDY ALA A 269 UNP P02649 VAL 287 CONFLICT SEQADV 8CDY GLN A 279 UNP P02649 LEU 297 CONFLICT SEQADV 8CDY GLU A 287 UNP P02649 VAL 305 CONFLICT SEQRES 1 A 675 GLY PRO MET LYS ILE GLU GLU GLY LYS LEU VAL ILE TRP SEQRES 2 A 675 ILE ASN GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU VAL SEQRES 3 A 675 GLY LYS LYS PHE GLU LYS ASP THR GLY ILE LYS VAL THR SEQRES 4 A 675 VAL GLU HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO GLN SEQRES 5 A 675 VAL ALA ALA THR GLY ASP GLY PRO ASP ILE ILE PHE TRP SEQRES 6 A 675 ALA HIS ASP ARG PHE GLY GLY TYR ALA GLN SER GLY LEU SEQRES 7 A 675 LEU ALA GLU ILE THR PRO ALA ALA ALA PHE GLN ASP LYS SEQRES 8 A 675 LEU TYR PRO PHE THR TRP ASP ALA VAL ARG TYR ASN GLY SEQRES 9 A 675 LYS LEU ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SER SEQRES 10 A 675 LEU ILE TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO LYS SEQRES 11 A 675 THR TRP GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU LYS SEQRES 12 A 675 ALA LYS GLY LYS SER ALA LEU MET PHE ASN LEU GLN GLU SEQRES 13 A 675 PRO TYR PHE THR TRP PRO LEU ILE ALA ALA ASP GLY GLY SEQRES 14 A 675 TYR ALA PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE LYS SEQRES 15 A 675 ASP VAL GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY LEU SEQRES 16 A 675 THR PHE LEU VAL ASP LEU ILE LYS ASN LYS HIS MET ASN SEQRES 17 A 675 ALA ASP THR ASP TYR SER ILE ALA GLU ALA ALA PHE ASN SEQRES 18 A 675 LYS GLY GLU THR ALA MET THR ILE ASN GLY PRO TRP ALA SEQRES 19 A 675 TRP SER ASN ILE ASP THR SER ALA VAL ASN TYR GLY VAL SEQRES 20 A 675 THR VAL LEU PRO THR PHE LYS GLY GLN PRO SER LYS PRO SEQRES 21 A 675 PHE VAL GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SER SEQRES 22 A 675 PRO ASN LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN TYR SEQRES 23 A 675 LEU LEU THR ASP GLU GLY LEU GLU ALA VAL ASN LYS ASP SEQRES 24 A 675 LYS PRO LEU GLY ALA VAL ALA LEU LYS SER TYR GLU GLU SEQRES 25 A 675 GLU LEU ALA LYS ASP PRO ARG ILE ALA ALA THR MET GLU SEQRES 26 A 675 ASN ALA GLN LYS GLY GLU ILE MET PRO ASN ILE PRO GLN SEQRES 27 A 675 MET SER ALA PHE TRP TYR ALA VAL ARG THR ALA VAL ILE SEQRES 28 A 675 ASN ALA ALA SER GLY ARG GLN THR VAL ASP ALA ALA LEU SEQRES 29 A 675 ALA ALA ALA GLN THR ASN ALA ALA ALA ALA HIS MET LYS SEQRES 30 A 675 VAL GLU GLN ALA VAL GLU THR GLU PRO GLU PRO GLU LEU SEQRES 31 A 675 ARG GLN GLN THR GLU TRP GLN SER GLY GLN ARG TRP GLU SEQRES 32 A 675 LEU ALA LEU GLY ARG PHE TRP ASP TYR LEU ARG TRP VAL SEQRES 33 A 675 GLN THR LEU SER GLU GLN VAL GLN GLU GLU LEU LEU SER SEQRES 34 A 675 SER GLN VAL THR GLN GLU LEU ARG ALA LEU MET ASP GLU SEQRES 35 A 675 THR MET LYS GLU LEU LYS ALA TYR LYS SER GLU LEU GLU SEQRES 36 A 675 GLU GLN LEU THR PRO VAL ALA GLU GLU THR ARG ALA ARG SEQRES 37 A 675 LEU SER LYS GLU LEU GLN ALA ALA GLN ALA ARG LEU GLY SEQRES 38 A 675 ALA ASP MET GLU ASP VAL ARG GLY ARG LEU VAL GLN TYR SEQRES 39 A 675 ARG GLY GLU VAL GLN ALA MET LEU GLY GLN SER THR GLU SEQRES 40 A 675 GLU LEU ARG VAL ARG LEU ALA SER HIS LEU ARG LYS LEU SEQRES 41 A 675 ARG LYS ARG LEU LEU ARG ASP ALA ASP ASP LEU GLN LYS SEQRES 42 A 675 ARG LEU ALA VAL TYR GLN ALA GLY ALA ARG GLU GLY ALA SEQRES 43 A 675 GLU ARG GLY LEU SER ALA ILE ARG GLU ARG LEU GLY PRO SEQRES 44 A 675 LEU VAL GLU GLN GLY ARG VAL ARG ALA ALA THR VAL GLY SEQRES 45 A 675 SER LEU ALA GLY GLN PRO LEU GLN GLU ARG ALA GLN ALA SEQRES 46 A 675 TRP GLY GLU ARG LEU ARG ALA ARG MET GLU GLU MET GLY SEQRES 47 A 675 SER ARG THR ARG ASP ARG LEU ASP GLU VAL LYS GLU GLN SEQRES 48 A 675 VAL ALA GLU VAL ARG ALA LYS LEU GLU GLU GLN ALA GLN SEQRES 49 A 675 GLN ILE ARG LEU GLN ALA GLU ALA ALA GLN ALA ARG LEU SEQRES 50 A 675 LYS SER ARG PHE GLU PRO LEU ALA GLU ASP MET GLN ARG SEQRES 51 A 675 GLN TRP ALA GLY GLN VAL GLU LYS VAL GLN ALA ALA GLU SEQRES 52 A 675 GLY THR SER ALA ALA PRO VAL PRO SER ASP ASN HIS FORMUL 2 HOH *64(H2 O) HELIX 1 AA1 GLN A 24 LEU A 43 1 20 HELIX 2 AA2 SER A 44 SER A 53 1 10 HELIX 3 AA3 SER A 54 GLU A 79 1 26 HELIX 4 AA4 GLU A 87 ALA A 124 1 38 HELIX 5 AA5 THR A 130 GLN A 163 1 34 CRYST1 45.567 53.025 72.577 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021946 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018859 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013778 0.00000