HEADER VIRUS 09-FEB-23 8CII TITLE DELTA-RBD COMPLEX WITH BA.2-07 FAB, SARS1-34 FAB AND C1 NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S2'; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SARS1-34 FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SARS1-34 FAB LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: BA.2-07 FAB HEAVY CHAIN; COMPND 15 CHAIN: A; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: BA.2-07 FAB LIGHT CHAIN; COMPND 19 CHAIN: B; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 6; COMPND 22 MOLECULE: C1 NANOBODY; COMPND 23 CHAIN: C; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 23 MOL_ID: 5; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 28 MOL_ID: 6; SOURCE 29 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 30 ORGANISM_TAXID: 9844; SOURCE 31 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 32 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SARS-COV2, SPIKE, GLYCOPROTEIN, CORNOVAVIRUS, ANTIBODY, FAB, BA.4, KEYWDS 2 BA.5, BA.2, DELTA VARIANT, CROSS-PROTECTIVE, OMICRON VARIANT, KEYWDS 3 VACCINE, THERAPEUTIC, COMPLEX, NEUTRALISING, CONVALESCENT SERA, KEYWDS 4 VIRAL PROTEIN, IMMUNE SYSTEM, C1 NANOBODY, SARS1-34 FAB, BA.2-07 KEYWDS 5 FAB, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR H.M.E.DUYVESTEYN,J.REN,D.I.STUART,E.E.FRY REVDAT 1 21-FEB-24 8CII 0 JRNL AUTH H.M.E.DUYVESTEYN,G.SCREATON,J.REN,D.I.STUART,E.E.FRY JRNL TITL POTENT CROSS-REACTIVE MABS FROM BA.4/5 BREAKTHROUGH JRNL TITL 2 INFECTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, UCSF REMARK 3 CHIMERAX, COOT, PHENIX, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 72.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.700 REMARK 3 NUMBER OF PARTICLES : 120791 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8CII COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1292128199. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DELTA-RBD COMPLEX WITH BA.2-07 REMARK 245 FAB, SARS1-34 FAB AND C1 REMARK 245 NANOBODY; SARS1-34 FAB; BA.2-07 REMARK 245 FAB; C1 NANOBODY; DELTA-RBD REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 165000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H, L, A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS E 327 REMARK 465 HIS E 328 REMARK 465 HIS E 329 REMARK 465 HIS E 330 REMARK 465 HIS E 331 REMARK 465 HIS E 332 REMARK 465 LEU E 518 REMARK 465 HIS E 519 REMARK 465 ALA E 520 REMARK 465 PRO E 521 REMARK 465 ALA E 522 REMARK 465 THR E 523 REMARK 465 VAL E 524 REMARK 465 CYS E 525 REMARK 465 GLY E 526 REMARK 465 LYS E 527 REMARK 465 LYS E 528 REMARK 465 LYS H 138 REMARK 465 SER H 139 REMARK 465 THR H 140 REMARK 465 SER H 141 REMARK 465 GLY H 142 REMARK 465 GLY H 143 REMARK 465 SER H 224 REMARK 465 CYS H 225 REMARK 465 ASP H 226 REMARK 465 LYS H 227 REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 LYS A 142 REMARK 465 SER A 143 REMARK 465 THR A 144 REMARK 465 SER A 145 REMARK 465 GLY A 146 REMARK 465 GLY A 147 REMARK 465 SER A 228 REMARK 465 CYS A 229 REMARK 465 ASP A 230 REMARK 465 LYS A 231 REMARK 465 GLY B 212 REMARK 465 GLU B 213 REMARK 465 CYS B 214 REMARK 465 GLN C 1 REMARK 465 LYS C 125 REMARK 465 HIS C 126 REMARK 465 HIS C 127 REMARK 465 HIS C 128 REMARK 465 HIS C 129 REMARK 465 HIS C 130 REMARK 465 HIS C 131 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN E 422 -53.74 -121.39 REMARK 500 ASP E 428 52.12 -90.10 REMARK 500 ALA H 91 -179.37 -171.96 REMARK 500 ASP H 110 137.93 -171.72 REMARK 500 ASP H 153 62.10 60.05 REMARK 500 ASP L 30 -141.00 55.25 REMARK 500 ALA L 84 -168.39 -164.32 REMARK 500 SER A 28 37.29 -148.87 REMARK 500 SER A 30 -5.58 74.91 REMARK 500 GLN A 62 37.75 -82.52 REMARK 500 HIS A 101 74.37 57.82 REMARK 500 ASP A 104 -73.25 -83.98 REMARK 500 SER A 105 -1.51 -150.47 REMARK 500 SER B 30 -120.39 54.53 REMARK 500 TYR B 32 46.29 -93.79 REMARK 500 ALA B 51 -17.63 74.11 REMARK 500 ALA B 84 -167.31 -161.26 REMARK 500 SER C 25 -65.17 -98.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8CBD RELATED DB: PDB REMARK 900 RELATED ID: 8CBE RELATED DB: PDB REMARK 900 RELATED ID: 8CBF RELATED DB: PDB REMARK 900 RELATED ID: EMD-16676 RELATED DB: EMDB REMARK 900 DELTA-RBD COMPLEX WITH BA.2-07 FAB, SARS1-34 FAB AND C1 NANOBODY DBREF 8CII E 327 528 UNP P0DTC2 SPIKE_SARS2 327 528 DBREF 8CII H 1 227 PDB 8CII 8CII 1 227 DBREF 8CII L 1 214 PDB 8CII 8CII 1 214 DBREF 8CII A 1 231 PDB 8CII 8CII 1 231 DBREF 8CII B 1 214 PDB 8CII 8CII 1 214 DBREF 8CII C 1 131 PDB 8CII 8CII 1 131 SEQADV 8CII HIS E 327 UNP P0DTC2 VAL 327 CONFLICT SEQADV 8CII HIS E 328 UNP P0DTC2 ARG 328 CONFLICT SEQADV 8CII HIS E 329 UNP P0DTC2 PHE 329 CONFLICT SEQADV 8CII HIS E 330 UNP P0DTC2 PRO 330 CONFLICT SEQADV 8CII HIS E 331 UNP P0DTC2 ASN 331 CONFLICT SEQADV 8CII HIS E 332 UNP P0DTC2 ILE 332 CONFLICT SEQADV 8CII ARG E 452 UNP P0DTC2 LEU 452 CONFLICT SEQADV 8CII LYS E 478 UNP P0DTC2 THR 478 CONFLICT SEQADV 8CII LYS E 527 UNP P0DTC2 PRO 527 CONFLICT SEQRES 1 E 202 HIS HIS HIS HIS HIS HIS THR ASN LEU CYS PRO PHE GLY SEQRES 2 E 202 GLU VAL PHE ASN ALA THR ARG PHE ALA SER VAL TYR ALA SEQRES 3 E 202 TRP ASN ARG LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SEQRES 4 E 202 SER VAL LEU TYR ASN SER ALA SER PHE SER THR PHE LYS SEQRES 5 E 202 CYS TYR GLY VAL SER PRO THR LYS LEU ASN ASP LEU CYS SEQRES 6 E 202 PHE THR ASN VAL TYR ALA ASP SER PHE VAL ILE ARG GLY SEQRES 7 E 202 ASP GLU VAL ARG GLN ILE ALA PRO GLY GLN THR GLY LYS SEQRES 8 E 202 ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE THR SEQRES 9 E 202 GLY CYS VAL ILE ALA TRP ASN SER ASN ASN LEU ASP SER SEQRES 10 E 202 LYS VAL GLY GLY ASN TYR ASN TYR ARG TYR ARG LEU PHE SEQRES 11 E 202 ARG LYS SER ASN LEU LYS PRO PHE GLU ARG ASP ILE SER SEQRES 12 E 202 THR GLU ILE TYR GLN ALA GLY SER LYS PRO CYS ASN GLY SEQRES 13 E 202 VAL GLU GLY PHE ASN CYS TYR PHE PRO LEU GLN SER TYR SEQRES 14 E 202 GLY PHE GLN PRO THR ASN GLY VAL GLY TYR GLN PRO TYR SEQRES 15 E 202 ARG VAL VAL VAL LEU SER PHE GLU LEU LEU HIS ALA PRO SEQRES 16 E 202 ALA THR VAL CYS GLY LYS LYS SEQRES 1 H 227 GLN VAL GLN LEU VAL GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 H 227 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER GLY SEQRES 3 H 227 ASP SER VAL THR SER TYR HIS TRP SER TRP ILE ARG GLN SEQRES 4 H 227 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY TYR ILE TYR SEQRES 5 H 227 TYR SER GLY PHE THR THR TYR ASN PRO SER LEU LYS SER SEQRES 6 H 227 ARG VAL THR MET SER LEU ASP THR SER LYS ASN GLN PHE SEQRES 7 H 227 SER LEU ARG LEU SER SER VAL THR ALA ALA ASP THR ALA SEQRES 8 H 227 VAL TYR TYR CYS VAL ARG LEU LEU SER GLY SER LEU TYR SEQRES 9 H 227 TRP ASN HIS TRP PHE ASP PRO TRP GLY GLN GLY THR LEU SEQRES 10 H 227 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 H 227 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 227 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 13 H 227 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 14 H 227 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 15 H 227 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 16 H 227 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 17 H 227 HIS LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU SEQRES 18 H 227 PRO LYS SER CYS ASP LYS SEQRES 1 L 214 ALA ILE GLN LEU THR GLN SER PRO SER THR LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 214 GLN SER ILE ASP ASN TRP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ASP GLY SER SEQRES 5 L 214 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO ASP ASP PHE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 L 214 ASN SER LEU PHE LEU THR PHE GLY GLY GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 A 231 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS GLU SEQRES 2 A 231 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 A 231 GLY SER PHE SER THR SER GLY ILE SER TRP VAL ARG GLN SEQRES 4 A 231 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY VAL ILE ILE SEQRES 5 A 231 PRO ILE GLN GLY THR GLY ASN TYR ALA GLN LYS PHE GLN SEQRES 6 A 231 GLY ARG VAL THR ILE THR ALA ASP GLU SER THR THR THR SEQRES 7 A 231 VAL TYR MET GLU LEU SER SER LEU ARG SER ASP ASP THR SEQRES 8 A 231 ALA LEU TYR TYR CYS ALA ARG ASP GLN HIS ILE TYR ASP SEQRES 9 A 231 SER SER GLY HIS GLY GLY LEU TRP PHE ASP PRO TRP GLY SEQRES 10 A 231 GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 11 A 231 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 12 A 231 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 13 A 231 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 14 A 231 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 15 A 231 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 16 A 231 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE SEQRES 17 A 231 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 18 A 231 LYS ARG VAL GLU PRO LYS SER CYS ASP LYS SEQRES 1 B 214 ALA ILE ARG MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 B 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 B 214 GLN SER ILE SER SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 B 214 PRO GLY LYS ALA PRO LYS VAL LEU ILE TYR GLY ALA SER SEQRES 5 B 214 SER LEU HIS SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG LEU SEQRES 7 B 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 B 214 HIS SER SER PRO ARG SER PHE GLY GLY GLY THR LYS VAL SEQRES 9 B 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 B 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 B 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 B 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 B 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 B 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 B 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 B 214 PHE ASN ARG GLY GLU CYS SEQRES 1 C 131 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 131 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 131 PHE THR ASN ASP PHE TYR SER ILE ALA TRP PHE ARG GLN SEQRES 4 C 131 ALA PRO GLY LYS GLU ARG GLU GLY VAL SER TRP LEU SER SEQRES 5 C 131 VAL SER ASP ASN THR PRO THR TYR VAL ASP SER VAL LYS SEQRES 6 C 131 ASP ARG PHE THR ILE SER ARG HIS ASN ALA ASN ASN THR SEQRES 7 C 131 VAL TYR LEU GLN MET ASN MET LEU LYS PRO GLU ASP THR SEQRES 8 C 131 ALA ILE TYR TYR CYS ALA ALA GLY ARG PHE ALA GLY ARG SEQRES 9 C 131 ASP THR TRP PRO SER SER TYR ASP TYR TRP GLY GLN GLY SEQRES 10 C 131 THR GLN VAL THR VAL SER SER LYS HIS HIS HIS HIS HIS SEQRES 11 C 131 HIS HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET FUC D 4 10 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 7 NAG 2(C8 H15 N O6) FORMUL 7 BMA C6 H12 O6 FORMUL 7 FUC C6 H12 O5 HELIX 1 AA1 PHE E 338 ASN E 343 1 6 HELIX 2 AA2 SER E 349 TRP E 353 5 5 HELIX 3 AA3 ASP E 364 ASN E 370 1 7 HELIX 4 AA4 SER E 383 LEU E 387 5 5 HELIX 5 AA5 GLU E 406 ILE E 410 5 5 HELIX 6 AA6 GLY E 416 ASN E 422 1 7 HELIX 7 AA7 SER E 438 SER E 443 1 6 HELIX 8 AA8 GLY E 502 GLN E 506 5 5 HELIX 9 AA9 SER H 28 TYR H 32 5 5 HELIX 10 AB1 PRO H 61 LYS H 64 5 4 HELIX 11 AB2 THR H 86 THR H 90 5 5 HELIX 12 AB3 SER H 165 ALA H 167 5 3 HELIX 13 AB4 PRO H 194 LEU H 198 5 5 HELIX 14 AB5 GLN L 79 PHE L 83 5 5 HELIX 15 AB6 SER L 121 GLY L 128 1 8 HELIX 16 AB7 LYS L 183 LYS L 188 1 6 HELIX 17 AB8 ILE A 52 GLY A 56 5 5 HELIX 18 AB9 ARG A 87 THR A 91 5 5 HELIX 19 AC1 SER A 169 ALA A 171 5 3 HELIX 20 AC2 PRO A 198 LEU A 202 5 5 HELIX 21 AC3 SER B 121 SER B 127 1 7 HELIX 22 AC4 LYS B 183 LYS B 188 1 6 HELIX 23 AC5 ASP C 62 LYS C 65 5 4 HELIX 24 AC6 LYS C 87 THR C 91 5 5 HELIX 25 AC7 TRP C 107 TYR C 111 5 5 SHEET 1 AA1 6 ASN E 354 ILE E 358 0 SHEET 2 AA1 6 ASN E 394 ILE E 402 -1 O VAL E 395 N ILE E 358 SHEET 3 AA1 6 TYR E 508 GLU E 516 -1 O VAL E 510 N PHE E 400 SHEET 4 AA1 6 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AA1 6 THR E 376 TYR E 380 -1 N LYS E 378 O VAL E 433 SHEET 6 AA1 6 ALA C 102 ARG C 104 -1 O ARG C 104 N PHE E 377 SHEET 1 AA2 2 ARG E 452 ARG E 454 0 SHEET 2 AA2 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AA3 2 TYR E 473 GLN E 474 0 SHEET 2 AA3 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AA4 4 GLN H 3 SER H 7 0 SHEET 2 AA4 4 THR H 17 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 AA4 4 GLN H 77 SER H 83 -1 O LEU H 82 N LEU H 18 SHEET 4 AA4 4 VAL H 67 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 AA5 6 LEU H 11 VAL H 12 0 SHEET 2 AA5 6 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA5 6 ALA H 91 SER H 100 -1 N ALA H 91 O VAL H 118 SHEET 4 AA5 6 HIS H 33 GLN H 39 -1 N ILE H 37 O TYR H 94 SHEET 5 AA5 6 GLU H 46 ILE H 51 -1 O ILE H 51 N TRP H 34 SHEET 6 AA5 6 THR H 57 TYR H 59 -1 O THR H 58 N TYR H 50 SHEET 1 AA6 4 LEU H 11 VAL H 12 0 SHEET 2 AA6 4 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA6 4 ALA H 91 SER H 100 -1 N ALA H 91 O VAL H 118 SHEET 4 AA6 4 HIS H 107 TRP H 112 -1 O TRP H 108 N LEU H 99 SHEET 1 AA7 4 SER H 129 LEU H 133 0 SHEET 2 AA7 4 ALA H 145 TYR H 154 -1 O LEU H 150 N PHE H 131 SHEET 3 AA7 4 TYR H 185 VAL H 193 -1 O VAL H 193 N ALA H 145 SHEET 4 AA7 4 VAL H 172 THR H 174 -1 N HIS H 173 O VAL H 190 SHEET 1 AA8 4 SER H 129 LEU H 133 0 SHEET 2 AA8 4 ALA H 145 TYR H 154 -1 O LEU H 150 N PHE H 131 SHEET 3 AA8 4 TYR H 185 VAL H 193 -1 O VAL H 193 N ALA H 145 SHEET 4 AA8 4 VAL H 178 LEU H 179 -1 N VAL H 178 O SER H 186 SHEET 1 AA9 3 THR H 160 TRP H 163 0 SHEET 2 AA9 3 TYR H 203 HIS H 209 -1 O ASN H 206 N SER H 162 SHEET 3 AA9 3 THR H 214 VAL H 220 -1 O VAL H 220 N TYR H 203 SHEET 1 AB1 4 LEU L 4 SER L 7 0 SHEET 2 AB1 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB1 4 GLU L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AB1 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB2 6 THR L 10 ALA L 13 0 SHEET 2 AB2 6 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AB2 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB2 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB2 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AB2 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 AB3 4 SER L 114 PHE L 118 0 SHEET 2 AB3 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB3 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AB3 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB4 4 ALA L 153 LEU L 154 0 SHEET 2 AB4 4 ALA L 144 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB4 4 VAL L 191 HIS L 198 -1 O ALA L 193 N LYS L 149 SHEET 4 AB4 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AB5 4 LEU A 4 GLN A 6 0 SHEET 2 AB5 4 SER A 17 ALA A 24 -1 O LYS A 23 N VAL A 5 SHEET 3 AB5 4 THR A 78 SER A 84 -1 O MET A 81 N VAL A 20 SHEET 4 AB5 4 VAL A 68 ASP A 73 -1 N ASP A 73 O THR A 78 SHEET 1 AB6 6 GLU A 10 LYS A 12 0 SHEET 2 AB6 6 THR A 120 VAL A 124 1 O THR A 123 N LYS A 12 SHEET 3 AB6 6 ALA A 92 ASP A 99 -1 N ALA A 92 O VAL A 122 SHEET 4 AB6 6 ILE A 34 GLN A 39 -1 N VAL A 37 O TYR A 95 SHEET 5 AB6 6 LEU A 45 ILE A 51 -1 O MET A 48 N TRP A 36 SHEET 6 AB6 6 ASN A 59 TYR A 60 -1 O ASN A 59 N VAL A 50 SHEET 1 AB7 4 GLU A 10 LYS A 12 0 SHEET 2 AB7 4 THR A 120 VAL A 124 1 O THR A 123 N LYS A 12 SHEET 3 AB7 4 ALA A 92 ASP A 99 -1 N ALA A 92 O VAL A 122 SHEET 4 AB7 4 PHE A 113 TRP A 116 -1 O PRO A 115 N ARG A 98 SHEET 1 AB8 4 SER A 133 LEU A 137 0 SHEET 2 AB8 4 ALA A 149 TYR A 158 -1 O GLY A 152 N LEU A 137 SHEET 3 AB8 4 TYR A 189 VAL A 197 -1 O VAL A 197 N ALA A 149 SHEET 4 AB8 4 VAL A 176 THR A 178 -1 N HIS A 177 O VAL A 194 SHEET 1 AB9 4 SER A 133 LEU A 137 0 SHEET 2 AB9 4 ALA A 149 TYR A 158 -1 O GLY A 152 N LEU A 137 SHEET 3 AB9 4 TYR A 189 VAL A 197 -1 O VAL A 197 N ALA A 149 SHEET 4 AB9 4 VAL A 182 LEU A 183 -1 N VAL A 182 O SER A 190 SHEET 1 AC1 3 THR A 164 TRP A 167 0 SHEET 2 AC1 3 TYR A 207 HIS A 213 -1 O ASN A 210 N SER A 166 SHEET 3 AC1 3 THR A 218 VAL A 224 -1 O VAL A 224 N TYR A 207 SHEET 1 AC2 4 MET B 4 SER B 7 0 SHEET 2 AC2 4 VAL B 19 ALA B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AC2 4 ASP B 70 ILE B 75 -1 O LEU B 73 N ILE B 21 SHEET 4 AC2 4 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AC3 6 SER B 10 ALA B 13 0 SHEET 2 AC3 6 THR B 102 ILE B 106 1 O GLU B 105 N LEU B 11 SHEET 3 AC3 6 THR B 85 GLN B 90 -1 N TYR B 86 O THR B 102 SHEET 4 AC3 6 LEU B 33 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 AC3 6 LYS B 45 TYR B 49 -1 O LYS B 45 N GLN B 37 SHEET 6 AC3 6 SER B 53 LEU B 54 -1 O SER B 53 N TYR B 49 SHEET 1 AC4 4 SER B 114 PHE B 118 0 SHEET 2 AC4 4 THR B 129 PHE B 139 -1 O LEU B 135 N PHE B 116 SHEET 3 AC4 4 TYR B 173 SER B 182 -1 O LEU B 179 N VAL B 132 SHEET 4 AC4 4 SER B 159 VAL B 163 -1 N SER B 162 O SER B 176 SHEET 1 AC5 4 ALA B 153 LEU B 154 0 SHEET 2 AC5 4 ALA B 144 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AC5 4 VAL B 191 HIS B 198 -1 O THR B 197 N LYS B 145 SHEET 4 AC5 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SHEET 1 AC6 4 LEU C 4 SER C 7 0 SHEET 2 AC6 4 SER C 17 ALA C 24 -1 O SER C 21 N SER C 7 SHEET 3 AC6 4 THR C 78 ASN C 84 -1 O VAL C 79 N CYS C 22 SHEET 4 AC6 4 PHE C 68 HIS C 73 -1 N SER C 71 O TYR C 80 SHEET 1 AC7 6 GLY C 10 VAL C 12 0 SHEET 2 AC7 6 THR C 118 VAL C 122 1 O THR C 121 N VAL C 12 SHEET 3 AC7 6 ALA C 92 GLY C 99 -1 N TYR C 94 O THR C 118 SHEET 4 AC7 6 SER C 33 GLN C 39 -1 N PHE C 37 O TYR C 95 SHEET 5 AC7 6 GLU C 46 SER C 52 -1 O LEU C 51 N ILE C 34 SHEET 6 AC7 6 PRO C 58 TYR C 60 -1 O THR C 59 N TRP C 50 SHEET 1 AC8 4 GLY C 10 VAL C 12 0 SHEET 2 AC8 4 THR C 118 VAL C 122 1 O THR C 121 N VAL C 12 SHEET 3 AC8 4 ALA C 92 GLY C 99 -1 N TYR C 94 O THR C 118 SHEET 4 AC8 4 TYR C 113 TRP C 114 -1 O TYR C 113 N ALA C 98 SSBOND 1 CYS E 336 CYS E 361 1555 1555 2.03 SSBOND 2 CYS E 379 CYS E 432 1555 1555 2.03 SSBOND 3 CYS E 480 CYS E 488 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 5 CYS H 149 CYS H 205 1555 1555 2.03 SSBOND 6 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 7 CYS L 134 CYS L 194 1555 1555 2.04 SSBOND 8 CYS A 22 CYS A 96 1555 1555 2.03 SSBOND 9 CYS A 153 CYS A 209 1555 1555 2.03 SSBOND 10 CYS B 23 CYS B 88 1555 1555 2.03 SSBOND 11 CYS B 134 CYS B 194 1555 1555 2.03 SSBOND 12 CYS C 22 CYS C 96 1555 1555 2.03 LINK ND2 ASN E 343 C1 NAG D 1 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O6 NAG D 1 C1 FUC D 4 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 CISPEP 1 ASP H 110 PRO H 111 0 -4.24 CISPEP 2 PHE H 155 PRO H 156 0 -7.51 CISPEP 3 GLU H 157 PRO H 158 0 -1.53 CISPEP 4 SER L 7 PRO L 8 0 -1.43 CISPEP 5 TYR L 140 PRO L 141 0 4.90 CISPEP 6 PHE A 159 PRO A 160 0 -8.09 CISPEP 7 GLU A 161 PRO A 162 0 1.09 CISPEP 8 SER B 7 PRO B 8 0 -2.28 CISPEP 9 SER B 94 PRO B 95 0 -2.75 CISPEP 10 TYR B 140 PRO B 141 0 4.83 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000