HEADER CHAPERONE 11-FEB-23 8CJ2 TITLE UREA-BASED FOLDAMER INHIBITOR C3U_5 CHIMERA IN COMPLEX WITH ASF1 TITLE 2 HISTONE CHAPERONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE CHAPERONE ASF1A; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: ANTI-SILENCING FUNCTION PROTEIN 1 HOMOLOG A,HASF1A,CCG1- COMPND 5 INTERACTING FACTOR A,HCIA; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: HISTONE CHAPERONE THAT FACILITATES HISTONE DEPOSITION COMPND 8 AND HISTONE EXCHANGE AND REMOVAL DURING NUCLEOSOME ASSEMBLY AND COMPND 9 DISASSEMBLY; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: C3U_5 CHIMERA INHIBITOR OF HISTONE CHAPERONE ASF1; COMPND 12 CHAIN: E, F, G, H; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: SEQUENCE OF A SHORT PEPTIDE-OLIGOUREA CHIMERA KNOWN TO COMPND 15 BIND ASF1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ASF1A, CGI-98, HSPC146; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM30; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS INHIBITOR, ASF1, HISTONE, PROTEIN-PROTEIN INTERACTION, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.PERRIN,B.LI,J.MBIANDA,V.ROPARS,P.LEGRAND,C.DOUAT,F.OCHSENBEIN, AUTHOR 2 G.GUICHARD REVDAT 4 10-JUL-24 8CJ2 1 COMPND FORMUL LINK REVDAT 3 15-NOV-23 8CJ2 1 LINK ATOM REVDAT 2 19-JUL-23 8CJ2 1 JRNL REVDAT 1 05-JUL-23 8CJ2 0 JRNL AUTH M.E.PERRIN,B.LI,J.MBIANDA,M.BAKAIL,C.ANDRE,G.MOAL,P.LEGRAND, JRNL AUTH 2 V.ROPARS,C.DOUAT,F.OCHSENBEIN,G.GUICHARD JRNL TITL UNEXPECTED BINDING MODES OF INHIBITORS TO THE HISTONE JRNL TITL 2 CHAPERONE ASF1 REVEALED BY A FOLDAMER SCANNING APPROACH. JRNL REF CHEM.COMMUN.(CAMB.) V. 59 8696 2023 JRNL REFN ESSN 1364-548X JRNL PMID 37347155 JRNL DOI 10.1039/D3CC01891A REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 51870 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2593 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.14 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.24 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1038 REMARK 3 BIN R VALUE (WORKING SET) : 0.2988 REMARK 3 BIN FREE R VALUE : 0.3164 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.91 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 51 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5339 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 349 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.03230 REMARK 3 B22 (A**2) : -5.03230 REMARK 3 B33 (A**2) : 10.06460 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.260 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.183 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.151 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.184 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.153 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5549 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7541 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1979 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1004 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5549 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 686 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4193 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.92 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.53 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.57 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|* E|*} REMARK 3 ORIGIN FOR THE GROUP (A): -36.4438 -20.6198 20.5012 REMARK 3 T TENSOR REMARK 3 T11: 0.0755 T22: -0.1149 REMARK 3 T33: -0.1045 T12: -0.0894 REMARK 3 T13: -0.0354 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 1.5676 L22: 0.8866 REMARK 3 L33: 2.8289 L12: 0.003 REMARK 3 L13: 0.5809 L23: -0.1419 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: 0.1461 S13: 0.1304 REMARK 3 S21: 0.1461 S22: -0.0214 S23: -0.1762 REMARK 3 S31: 0.1304 S32: -0.1762 S33: -0.0293 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|* F|*} REMARK 3 ORIGIN FOR THE GROUP (A): -46.3887 -43.1708 33.2506 REMARK 3 T TENSOR REMARK 3 T11: 0.0341 T22: -0.1107 REMARK 3 T33: -0.0972 T12: -0.0866 REMARK 3 T13: 0.0074 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 1.173 L22: 2.0594 REMARK 3 L33: 2.6123 L12: -0.4861 REMARK 3 L13: 0.2415 L23: -0.0862 REMARK 3 S TENSOR REMARK 3 S11: -0.058 S12: -0.2903 S13: 0.0287 REMARK 3 S21: -0.2903 S22: 0.1281 S23: -0.1029 REMARK 3 S31: 0.0287 S32: -0.1029 S33: -0.0702 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {C|* G|*} REMARK 3 ORIGIN FOR THE GROUP (A): -18.7741 -2.1997 16.9345 REMARK 3 T TENSOR REMARK 3 T11: 0.1104 T22: -0.1317 REMARK 3 T33: 0.0154 T12: -0.1487 REMARK 3 T13: -0.1779 T23: 0.0947 REMARK 3 L TENSOR REMARK 3 L11: 3.8593 L22: 3.0105 REMARK 3 L33: 4.4148 L12: 0.6967 REMARK 3 L13: -0.7442 L23: 0.339 REMARK 3 S TENSOR REMARK 3 S11: 0.1565 S12: 0.54 S13: -0.2697 REMARK 3 S21: 0.54 S22: -0.2813 S23: 0.0691 REMARK 3 S31: -0.2697 S32: 0.0691 S33: 0.1248 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {D|* H|*} REMARK 3 ORIGIN FOR THE GROUP (A): 3.5028 -17.8721 29.9202 REMARK 3 T TENSOR REMARK 3 T11: 0.1753 T22: -0.1125 REMARK 3 T33: 0.1056 T12: -0.1552 REMARK 3 T13: 0.0394 T23: -0.007 REMARK 3 L TENSOR REMARK 3 L11: 1.8441 L22: 3.0506 REMARK 3 L33: 3.6526 L12: -0.0486 REMARK 3 L13: -0.1216 L23: 0.6065 REMARK 3 S TENSOR REMARK 3 S11: -0.1523 S12: -0.5164 S13: -0.232 REMARK 3 S21: -0.5164 S22: 0.189 S23: 0.2567 REMARK 3 S31: -0.232 S32: 0.2567 S33: -0.0368 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CJ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1292127600. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : 0.97857 REMARK 200 OPTICS : KB MIRROS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51901 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.127 REMARK 200 RESOLUTION RANGE LOW (A) : 49.335 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 21.23 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1190 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 18.79 REMARK 200 R MERGE FOR SHELL (I) : 1.54500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.007 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M AMMONIUM SULFATE 0.085 M NAOAC REMARK 280 PH 4.6 25.5% PEG 2000 MME 15% (V/V) GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.37333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.18667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 112.37333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.18667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 155 REMARK 465 ASN A 156 REMARK 465 ASP B 155 REMARK 465 ASN B 156 REMARK 465 ASP C 155 REMARK 465 ASN C 156 REMARK 465 ASP D 155 REMARK 465 ASN D 156 REMARK 465 ACE H 0 REMARK 465 GLU H 1 REMARK 465 LYS H 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 322 O HOH D 308 1.69 REMARK 500 O HOH C 322 O HOH C 344 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 OUR E 5 CA - C - N ANGL. DEV. = 26.6 DEGREES REMARK 500 URL E 6 CA - C - N ANGL. DEV. = 25.6 DEGREES REMARK 500 QQ8 E 7 CA - C - N ANGL. DEV. = 17.2 DEGREES REMARK 500 OUR F 5 CA - C - N ANGL. DEV. = 26.5 DEGREES REMARK 500 URL F 6 CA - C - N ANGL. DEV. = 25.1 DEGREES REMARK 500 QQ8 F 7 CA - C - N ANGL. DEV. = 17.9 DEGREES REMARK 500 OUR G 5 CA - C - N ANGL. DEV. = 26.9 DEGREES REMARK 500 URL G 6 CA - C - N ANGL. DEV. = 26.4 DEGREES REMARK 500 QQ8 G 7 CA - C - N ANGL. DEV. = 17.7 DEGREES REMARK 500 OUR H 5 CA - C - N ANGL. DEV. = 27.9 DEGREES REMARK 500 URL H 6 CA - C - N ANGL. DEV. = 24.3 DEGREES REMARK 500 QQ8 H 7 CA - C - N ANGL. DEV. = 22.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 QQ8 E 7 41.19 -79.09 REMARK 500 QQ8 F 7 39.66 -80.11 REMARK 500 QQ8 G 7 40.67 -81.18 REMARK 500 QQ8 H 7 12.19 -53.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 OUR E 5 URL E 6 132.45 REMARK 500 URL E 6 QQ8 E 7 121.19 REMARK 500 QQ8 E 7 ARG E 8 142.07 REMARK 500 OUR F 5 URL F 6 130.21 REMARK 500 URL F 6 QQ8 F 7 120.07 REMARK 500 QQ8 F 7 ARG F 8 143.24 REMARK 500 OUR G 5 URL G 6 131.22 REMARK 500 URL G 6 QQ8 G 7 123.82 REMARK 500 QQ8 G 7 ARG G 8 143.08 REMARK 500 OUR H 5 URL H 6 130.92 REMARK 500 URL H 6 QQ8 H 7 136.02 REMARK 500 QQ8 H 7 ARG H 8 140.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 OUR E 5 -28.35 REMARK 500 URL E 6 -34.23 REMARK 500 QQ8 E 7 -19.82 REMARK 500 OUR F 5 -29.45 REMARK 500 URL F 6 -35.29 REMARK 500 QQ8 F 7 -20.67 REMARK 500 OUR G 5 -27.91 REMARK 500 URL G 6 -33.99 REMARK 500 QQ8 G 7 -18.64 REMARK 500 OUR H 5 -28.33 REMARK 500 URL H 6 -26.42 REMARK 500 QQ8 H 7 -23.77 REMARK 500 REMARK 500 REMARK: NULL DBREF 8CJ2 A 1 156 UNP Q9Y294 ASF1A_HUMAN 1 156 DBREF 8CJ2 B 1 156 UNP Q9Y294 ASF1A_HUMAN 1 156 DBREF 8CJ2 C 1 156 UNP Q9Y294 ASF1A_HUMAN 1 156 DBREF 8CJ2 D 1 156 UNP Q9Y294 ASF1A_HUMAN 1 156 DBREF 8CJ2 E 0 10 PDB 8CJ2 8CJ2 0 10 DBREF 8CJ2 F 0 10 PDB 8CJ2 8CJ2 0 10 DBREF 8CJ2 G 0 10 PDB 8CJ2 8CJ2 0 10 DBREF 8CJ2 H 0 10 PDB 8CJ2 8CJ2 0 10 SEQRES 1 A 156 MET ALA LYS VAL GLN VAL ASN ASN VAL VAL VAL LEU ASP SEQRES 2 A 156 ASN PRO SER PRO PHE TYR ASN PRO PHE GLN PHE GLU ILE SEQRES 3 A 156 THR PHE GLU CYS ILE GLU ASP LEU SER GLU ASP LEU GLU SEQRES 4 A 156 TRP LYS ILE ILE TYR VAL GLY SER ALA GLU SER GLU GLU SEQRES 5 A 156 TYR ASP GLN VAL LEU ASP SER VAL LEU VAL GLY PRO VAL SEQRES 6 A 156 PRO ALA GLY ARG HIS MET PHE VAL PHE GLN ALA ASP ALA SEQRES 7 A 156 PRO ASN PRO GLY LEU ILE PRO ASP ALA ASP ALA VAL GLY SEQRES 8 A 156 VAL THR VAL VAL LEU ILE THR CYS THR TYR ARG GLY GLN SEQRES 9 A 156 GLU PHE ILE ARG VAL GLY TYR TYR VAL ASN ASN GLU TYR SEQRES 10 A 156 THR GLU THR GLU LEU ARG GLU ASN PRO PRO VAL LYS PRO SEQRES 11 A 156 ASP PHE SER LYS LEU GLN ARG ASN ILE LEU ALA SER ASN SEQRES 12 A 156 PRO ARG VAL THR ARG PHE HIS ILE ASN TRP GLU ASP ASN SEQRES 1 B 156 MET ALA LYS VAL GLN VAL ASN ASN VAL VAL VAL LEU ASP SEQRES 2 B 156 ASN PRO SER PRO PHE TYR ASN PRO PHE GLN PHE GLU ILE SEQRES 3 B 156 THR PHE GLU CYS ILE GLU ASP LEU SER GLU ASP LEU GLU SEQRES 4 B 156 TRP LYS ILE ILE TYR VAL GLY SER ALA GLU SER GLU GLU SEQRES 5 B 156 TYR ASP GLN VAL LEU ASP SER VAL LEU VAL GLY PRO VAL SEQRES 6 B 156 PRO ALA GLY ARG HIS MET PHE VAL PHE GLN ALA ASP ALA SEQRES 7 B 156 PRO ASN PRO GLY LEU ILE PRO ASP ALA ASP ALA VAL GLY SEQRES 8 B 156 VAL THR VAL VAL LEU ILE THR CYS THR TYR ARG GLY GLN SEQRES 9 B 156 GLU PHE ILE ARG VAL GLY TYR TYR VAL ASN ASN GLU TYR SEQRES 10 B 156 THR GLU THR GLU LEU ARG GLU ASN PRO PRO VAL LYS PRO SEQRES 11 B 156 ASP PHE SER LYS LEU GLN ARG ASN ILE LEU ALA SER ASN SEQRES 12 B 156 PRO ARG VAL THR ARG PHE HIS ILE ASN TRP GLU ASP ASN SEQRES 1 C 156 MET ALA LYS VAL GLN VAL ASN ASN VAL VAL VAL LEU ASP SEQRES 2 C 156 ASN PRO SER PRO PHE TYR ASN PRO PHE GLN PHE GLU ILE SEQRES 3 C 156 THR PHE GLU CYS ILE GLU ASP LEU SER GLU ASP LEU GLU SEQRES 4 C 156 TRP LYS ILE ILE TYR VAL GLY SER ALA GLU SER GLU GLU SEQRES 5 C 156 TYR ASP GLN VAL LEU ASP SER VAL LEU VAL GLY PRO VAL SEQRES 6 C 156 PRO ALA GLY ARG HIS MET PHE VAL PHE GLN ALA ASP ALA SEQRES 7 C 156 PRO ASN PRO GLY LEU ILE PRO ASP ALA ASP ALA VAL GLY SEQRES 8 C 156 VAL THR VAL VAL LEU ILE THR CYS THR TYR ARG GLY GLN SEQRES 9 C 156 GLU PHE ILE ARG VAL GLY TYR TYR VAL ASN ASN GLU TYR SEQRES 10 C 156 THR GLU THR GLU LEU ARG GLU ASN PRO PRO VAL LYS PRO SEQRES 11 C 156 ASP PHE SER LYS LEU GLN ARG ASN ILE LEU ALA SER ASN SEQRES 12 C 156 PRO ARG VAL THR ARG PHE HIS ILE ASN TRP GLU ASP ASN SEQRES 1 D 156 MET ALA LYS VAL GLN VAL ASN ASN VAL VAL VAL LEU ASP SEQRES 2 D 156 ASN PRO SER PRO PHE TYR ASN PRO PHE GLN PHE GLU ILE SEQRES 3 D 156 THR PHE GLU CYS ILE GLU ASP LEU SER GLU ASP LEU GLU SEQRES 4 D 156 TRP LYS ILE ILE TYR VAL GLY SER ALA GLU SER GLU GLU SEQRES 5 D 156 TYR ASP GLN VAL LEU ASP SER VAL LEU VAL GLY PRO VAL SEQRES 6 D 156 PRO ALA GLY ARG HIS MET PHE VAL PHE GLN ALA ASP ALA SEQRES 7 D 156 PRO ASN PRO GLY LEU ILE PRO ASP ALA ASP ALA VAL GLY SEQRES 8 D 156 VAL THR VAL VAL LEU ILE THR CYS THR TYR ARG GLY GLN SEQRES 9 D 156 GLU PHE ILE ARG VAL GLY TYR TYR VAL ASN ASN GLU TYR SEQRES 10 D 156 THR GLU THR GLU LEU ARG GLU ASN PRO PRO VAL LYS PRO SEQRES 11 D 156 ASP PHE SER LYS LEU GLN ARG ASN ILE LEU ALA SER ASN SEQRES 12 D 156 PRO ARG VAL THR ARG PHE HIS ILE ASN TRP GLU ASP ASN SEQRES 1 E 11 ACE GLU LYS ALN ALA OUR URL QQ8 ARG ILE 66N SEQRES 1 F 11 ACE GLU LYS ALN ALA OUR URL QQ8 ARG ILE 66N SEQRES 1 G 11 ACE GLU LYS ALN ALA OUR URL QQ8 ARG ILE 66N SEQRES 1 H 11 ACE GLU LYS ALN ALA OUR URL QQ8 ARG ILE 66N HET ACE E 0 3 HET ALN E 3 15 HET OUR E 5 13 HET URL E 6 10 HET QQ8 E 7 11 HET 66N E 10 6 HET ACE F 0 3 HET ALN F 3 15 HET OUR F 5 13 HET URL F 6 10 HET QQ8 F 7 11 HET 66N F 10 6 HET ACE G 0 3 HET ALN G 3 15 HET OUR G 5 13 HET URL G 6 10 HET QQ8 G 7 11 HET 66N G 10 6 HET ALN H 3 15 HET OUR H 5 13 HET URL H 6 10 HET QQ8 H 7 11 HET 66N H 10 6 HET GOL A 201 6 HET GOL A 202 6 HET GOL A 203 6 HET GOL B 201 6 HET GOL B 202 6 HET GOL B 203 6 HET GOL B 204 6 HET GOL C 201 6 HET GOL D 201 6 HET GOL D 202 6 HET GOL D 203 6 HET GOL E 101 6 HET GOL F 101 6 HET GOL F 102 6 HET SO4 G 101 5 HETNAM ACE ACETYL GROUP HETNAM ALN NAPHTHALEN-2-YL-3-ALANINE HETNAM OUR [AZANYL-[[(4~{S})-4-AZANYL-5-(CARBOXYAMINO) HETNAM 2 OUR PENTYL]AMINO]METHYLIDENE]AZANIUM HETNAM URL [(2~{S})-2-AZANYL-4-METHYL-PENTYL]CARBAMIC ACID HETNAM QQ8 (4~{S})-4-AZANYL-5-FORMAMIDO-PENTANAMIDE HETNAM 66N L-ALANINAMIDE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ACE 3(C2 H4 O) FORMUL 5 ALN 4(C13 H13 N O2) FORMUL 5 OUR 4(C7 H18 N5 O2 1+) FORMUL 5 URL 4(C7 H16 N2 O2) FORMUL 5 QQ8 4(C6 H13 N3 O3) FORMUL 5 66N 4(C3 H8 N2 O) FORMUL 9 GOL 14(C3 H8 O3) FORMUL 23 SO4 O4 S 2- FORMUL 24 HOH *349(H2 O) HELIX 1 AA1 SER A 50 GLU A 52 5 3 HELIX 2 AA2 ASN A 80 ILE A 84 5 5 HELIX 3 AA3 PRO A 85 VAL A 90 1 6 HELIX 4 AA4 GLU A 119 ASN A 125 1 7 HELIX 5 AA5 ASP A 131 SER A 133 5 3 HELIX 6 AA6 SER B 50 GLU B 52 5 3 HELIX 7 AA7 ASN B 80 ILE B 84 5 5 HELIX 8 AA8 PRO B 85 ALA B 89 5 5 HELIX 9 AA9 GLU B 119 ASN B 125 1 7 HELIX 10 AB1 ASP B 131 SER B 133 5 3 HELIX 11 AB2 SER C 50 GLU C 52 5 3 HELIX 12 AB3 ASN C 80 ILE C 84 5 5 HELIX 13 AB4 PRO C 85 VAL C 90 1 6 HELIX 14 AB5 GLU C 119 ASN C 125 1 7 HELIX 15 AB6 ASP C 131 SER C 133 5 3 HELIX 16 AB7 SER D 50 GLU D 52 5 3 HELIX 17 AB8 ASN D 80 ILE D 84 5 5 HELIX 18 AB9 PRO D 85 VAL D 90 1 6 HELIX 19 AC1 GLU D 119 ASN D 125 1 7 HELIX 20 AC2 ASP D 131 SER D 133 5 3 SHEET 1 AA1 6 VAL A 4 VAL A 11 0 SHEET 2 AA1 6 PHE A 22 CYS A 30 -1 O GLU A 25 N VAL A 10 SHEET 3 AA1 6 GLY A 68 ALA A 76 -1 O PHE A 74 N PHE A 24 SHEET 4 AA1 6 GLY C 68 ALA C 76 1 O VAL C 73 N VAL A 73 SHEET 5 AA1 6 PHE C 22 CYS C 30 -1 N PHE C 28 O HIS C 70 SHEET 6 AA1 6 VAL C 4 VAL C 11 -1 N ASN C 8 O THR C 27 SHEET 1 AA2 6 SER A 16 PRO A 17 0 SHEET 2 AA2 6 LEU A 135 ILE A 139 -1 O ARG A 137 N SER A 16 SHEET 3 AA2 6 GLN A 104 TYR A 117 -1 N GLU A 116 O GLN A 136 SHEET 4 AA2 6 GLY A 91 TYR A 101 -1 N ILE A 97 O VAL A 109 SHEET 5 AA2 6 LEU A 38 VAL A 45 -1 N VAL A 45 O VAL A 94 SHEET 6 AA2 6 ASP A 54 VAL A 62 -1 O GLN A 55 N TYR A 44 SHEET 1 AA3 4 SER A 16 PRO A 17 0 SHEET 2 AA3 4 LEU A 135 ILE A 139 -1 O ARG A 137 N SER A 16 SHEET 3 AA3 4 GLN A 104 TYR A 117 -1 N GLU A 116 O GLN A 136 SHEET 4 AA3 4 ARG A 145 ARG A 148 -1 O THR A 147 N ARG A 108 SHEET 1 AA4 3 VAL B 4 VAL B 11 0 SHEET 2 AA4 3 PHE B 22 CYS B 30 -1 O THR B 27 N ASN B 8 SHEET 3 AA4 3 GLY B 68 ALA B 76 -1 O PHE B 72 N ILE B 26 SHEET 1 AA5 6 SER B 16 PRO B 17 0 SHEET 2 AA5 6 LEU B 135 ILE B 139 -1 O ARG B 137 N SER B 16 SHEET 3 AA5 6 GLN B 104 TYR B 117 -1 N GLU B 116 O GLN B 136 SHEET 4 AA5 6 GLY B 91 TYR B 101 -1 N ILE B 97 O VAL B 109 SHEET 5 AA5 6 LEU B 38 VAL B 45 -1 N GLU B 39 O THR B 100 SHEET 6 AA5 6 ASP B 54 VAL B 62 -1 O GLN B 55 N TYR B 44 SHEET 1 AA6 4 SER B 16 PRO B 17 0 SHEET 2 AA6 4 LEU B 135 ILE B 139 -1 O ARG B 137 N SER B 16 SHEET 3 AA6 4 GLN B 104 TYR B 117 -1 N GLU B 116 O GLN B 136 SHEET 4 AA6 4 ARG B 145 ARG B 148 -1 O ARG B 145 N GLY B 110 SHEET 1 AA7 6 SER C 16 PRO C 17 0 SHEET 2 AA7 6 LEU C 135 ILE C 139 -1 O ARG C 137 N SER C 16 SHEET 3 AA7 6 GLN C 104 TYR C 117 -1 N GLU C 116 O GLN C 136 SHEET 4 AA7 6 GLY C 91 TYR C 101 -1 N ILE C 97 O VAL C 109 SHEET 5 AA7 6 LEU C 38 VAL C 45 -1 N VAL C 45 O VAL C 94 SHEET 6 AA7 6 ASP C 54 VAL C 62 -1 O GLN C 55 N TYR C 44 SHEET 1 AA8 4 SER C 16 PRO C 17 0 SHEET 2 AA8 4 LEU C 135 ILE C 139 -1 O ARG C 137 N SER C 16 SHEET 3 AA8 4 GLN C 104 TYR C 117 -1 N GLU C 116 O GLN C 136 SHEET 4 AA8 4 ARG C 145 ARG C 148 -1 O THR C 147 N ARG C 108 SHEET 1 AA9 3 VAL D 4 VAL D 11 0 SHEET 2 AA9 3 PHE D 22 CYS D 30 -1 O GLU D 25 N VAL D 10 SHEET 3 AA9 3 GLY D 68 ALA D 76 -1 O PHE D 74 N PHE D 24 SHEET 1 AB1 6 SER D 16 PRO D 17 0 SHEET 2 AB1 6 LEU D 135 ILE D 139 -1 O ARG D 137 N SER D 16 SHEET 3 AB1 6 GLN D 104 TYR D 117 -1 N GLU D 116 O GLN D 136 SHEET 4 AB1 6 GLY D 91 TYR D 101 -1 N ILE D 97 O VAL D 109 SHEET 5 AB1 6 LEU D 38 VAL D 45 -1 N VAL D 45 O VAL D 94 SHEET 6 AB1 6 ASP D 54 VAL D 62 -1 O GLN D 55 N TYR D 44 SHEET 1 AB2 4 SER D 16 PRO D 17 0 SHEET 2 AB2 4 LEU D 135 ILE D 139 -1 O ARG D 137 N SER D 16 SHEET 3 AB2 4 GLN D 104 TYR D 117 -1 N GLU D 116 O GLN D 136 SHEET 4 AB2 4 ARG D 145 ARG D 148 -1 O THR D 147 N ARG D 108 LINK C ACE E 0 N GLU E 1 1555 1555 1.34 LINK C LYS E 2 N ALN E 3 1555 1555 1.33 LINK C ALN E 3 N ALA E 4 1555 1555 1.33 LINK C ALA E 4 N OUR E 5 1555 1555 1.34 LINK C OUR E 5 N URL E 6 1555 1555 1.34 LINK C URL E 6 N QQ8 E 7 1555 1555 1.33 LINK C QQ8 E 7 N ARG E 8 1555 1555 1.33 LINK C ILE E 9 N11 66N E 10 1555 1555 1.33 LINK C ACE F 0 N GLU F 1 1555 1555 1.33 LINK C LYS F 2 N ALN F 3 1555 1555 1.33 LINK C ALN F 3 N ALA F 4 1555 1555 1.33 LINK C ALA F 4 N OUR F 5 1555 1555 1.33 LINK C OUR F 5 N URL F 6 1555 1555 1.34 LINK C URL F 6 N QQ8 F 7 1555 1555 1.34 LINK C QQ8 F 7 N ARG F 8 1555 1555 1.34 LINK C ILE F 9 N11 66N F 10 1555 1555 1.33 LINK C ACE G 0 N GLU G 1 1555 1555 1.34 LINK C LYS G 2 N ALN G 3 1555 1555 1.33 LINK C ALN G 3 N ALA G 4 1555 1555 1.34 LINK C ALA G 4 N OUR G 5 1555 1555 1.34 LINK C OUR G 5 N URL G 6 1555 1555 1.34 LINK C URL G 6 N QQ8 G 7 1555 1555 1.33 LINK C QQ8 G 7 N ARG G 8 1555 1555 1.34 LINK C ILE G 9 N11 66N G 10 1555 1555 1.34 LINK C ALN H 3 N ALA H 4 1555 1555 1.34 LINK C ALA H 4 N OUR H 5 1555 1555 1.34 LINK C OUR H 5 N URL H 6 1555 1555 1.34 LINK C URL H 6 N QQ8 H 7 1555 1555 1.34 LINK C QQ8 H 7 N ARG H 8 1555 1555 1.34 LINK C ILE H 9 N11 66N H 10 1555 1555 1.33 CISPEP 1 ASN A 14 PRO A 15 0 -1.86 CISPEP 2 GLY A 63 PRO A 64 0 4.77 CISPEP 3 ASN B 14 PRO B 15 0 -1.40 CISPEP 4 GLY B 63 PRO B 64 0 0.58 CISPEP 5 ASN C 14 PRO C 15 0 -1.51 CISPEP 6 GLY C 63 PRO C 64 0 -2.25 CISPEP 7 ASN D 14 PRO D 15 0 0.83 CISPEP 8 GLY D 63 PRO D 64 0 -1.88 CRYST1 98.670 98.670 168.560 90.00 90.00 120.00 P 62 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010135 0.005851 0.000000 0.00000 SCALE2 0.000000 0.011703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005933 0.00000