HEADER IMMUNE SYSTEM 13-FEB-23 8CJV TITLE STRUCTURE OF BOVINE CD46 ECTODOMAIN (SCR 1-4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE COFACTOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: CD46, MCP; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS HOST CELL RECEPTOR, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.AITKENHEAD,D.I.STUART,K.EL OMARI REVDAT 3 06-NOV-24 8CJV 1 REMARK REVDAT 2 09-AUG-23 8CJV 1 JRNL REVDAT 1 12-JUL-23 8CJV 0 JRNL AUTH H.AITKENHEAD,D.I.STUART,K.EL OMARI JRNL TITL STRUCTURE OF BOVINE CD46 ECTODOMAIN. JRNL REF VIRUSES V. 15 2023 JRNL REFN ESSN 1999-4915 JRNL PMID 37515111 JRNL DOI 10.3390/V15071424 REMARK 2 REMARK 2 RESOLUTION. 2.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 43.9 REMARK 3 NUMBER OF REFLECTIONS : 10871 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.254 REMARK 3 R VALUE (WORKING SET) : 0.253 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 88.1700 - 4.5100 0.99 6053 317 0.2481 0.2762 REMARK 3 2 4.5100 - 3.5800 0.51 2966 155 0.2462 0.2951 REMARK 3 3 3.5800 - 3.1300 0.17 1015 39 0.3218 0.3192 REMARK 3 4 3.1300 - 2.8400 0.05 309 17 0.3067 0.4328 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.392 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 3597 REMARK 3 ANGLE : 1.840 4913 REMARK 3 CHIRALITY : 0.099 542 REMARK 3 PLANARITY : 0.013 648 REMARK 3 DIHEDRAL : 12.056 1329 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -86.9408 12.1576 -7.4847 REMARK 3 T TENSOR REMARK 3 T11: 0.7258 T22: 0.8687 REMARK 3 T33: 0.9549 T12: 0.6113 REMARK 3 T13: 0.3959 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 0.5897 L22: 0.3641 REMARK 3 L33: 0.8680 L12: 0.4189 REMARK 3 L13: 0.6785 L23: 0.4176 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.4126 S13: 0.5757 REMARK 3 S21: 0.5689 S22: -0.0299 S23: 1.4548 REMARK 3 S31: -0.6431 S32: -1.0718 S33: 2.6508 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.0002 -1.3797 -17.5865 REMARK 3 T TENSOR REMARK 3 T11: -0.0090 T22: 0.0703 REMARK 3 T33: -0.2231 T12: 0.0420 REMARK 3 T13: 0.1882 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 0.4756 L22: 0.1558 REMARK 3 L33: 0.4373 L12: -0.0672 REMARK 3 L13: -0.0797 L23: -0.0575 REMARK 3 S TENSOR REMARK 3 S11: 0.1760 S12: 0.1530 S13: 0.1686 REMARK 3 S21: -0.0886 S22: -0.0763 S23: -0.0643 REMARK 3 S31: -0.1238 S32: 0.0721 S33: 0.1414 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6449 -22.8176 -16.4753 REMARK 3 T TENSOR REMARK 3 T11: 0.5923 T22: 1.0674 REMARK 3 T33: 1.1259 T12: 0.5536 REMARK 3 T13: -0.0219 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 1.5481 L22: 0.1598 REMARK 3 L33: 0.0795 L12: 0.1481 REMARK 3 L13: 0.2497 L23: 0.1000 REMARK 3 S TENSOR REMARK 3 S11: 0.0805 S12: 0.4373 S13: 0.3881 REMARK 3 S21: -0.2650 S22: -0.3004 S23: -1.1053 REMARK 3 S31: 0.2417 S32: 0.6335 S33: 0.1251 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.6523 7.3373 6.6966 REMARK 3 T TENSOR REMARK 3 T11: 0.3047 T22: 0.9420 REMARK 3 T33: 0.7654 T12: -0.2361 REMARK 3 T13: -0.1601 T23: -0.1054 REMARK 3 L TENSOR REMARK 3 L11: 0.9577 L22: 2.1659 REMARK 3 L33: 2.6502 L12: -0.0568 REMARK 3 L13: -0.1077 L23: -0.3691 REMARK 3 S TENSOR REMARK 3 S11: 0.1829 S12: -0.2237 S13: 0.8182 REMARK 3 S21: 0.5529 S22: -0.0794 S23: -1.4328 REMARK 3 S31: -0.5865 S32: 1.1786 S33: 1.9118 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -72.0889 -5.4488 -2.3693 REMARK 3 T TENSOR REMARK 3 T11: 0.1967 T22: 0.3661 REMARK 3 T33: 0.0606 T12: -0.0486 REMARK 3 T13: -0.1037 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.4178 L22: 1.1301 REMARK 3 L33: 1.2315 L12: 0.8085 REMARK 3 L13: -0.0170 L23: -0.1098 REMARK 3 S TENSOR REMARK 3 S11: 0.1704 S12: 0.1879 S13: -0.2730 REMARK 3 S21: -0.0956 S22: 0.0042 S23: -0.0670 REMARK 3 S31: 0.4215 S32: -0.0505 S33: -0.3342 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 169 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A):-109.6705 -13.7841 0.6328 REMARK 3 T TENSOR REMARK 3 T11: 0.7187 T22: 2.2237 REMARK 3 T33: 2.4852 T12: 0.1499 REMARK 3 T13: 0.2544 T23: 0.1789 REMARK 3 L TENSOR REMARK 3 L11: -0.0004 L22: 0.0011 REMARK 3 L33: -0.0010 L12: 0.0019 REMARK 3 L13: -0.0009 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.1957 S12: -0.3892 S13: -0.7985 REMARK 3 S21: 0.4790 S22: -0.0494 S23: 1.0864 REMARK 3 S31: 0.1300 S32: -1.2136 S33: 0.2908 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5510 -52.2874 -3.4344 REMARK 3 T TENSOR REMARK 3 T11: 0.6139 T22: 0.6429 REMARK 3 T33: 0.7953 T12: 0.3343 REMARK 3 T13: -0.0238 T23: -0.1167 REMARK 3 L TENSOR REMARK 3 L11: 0.4828 L22: 0.0269 REMARK 3 L33: 2.8311 L12: -0.0657 REMARK 3 L13: 0.4146 L23: -0.1509 REMARK 3 S TENSOR REMARK 3 S11: -0.0460 S12: -0.1962 S13: -0.6133 REMARK 3 S21: -0.0158 S22: 0.4287 S23: 0.0256 REMARK 3 S31: 0.9167 S32: 0.2551 S33: 0.2244 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CJV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1292128550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10884 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.840 REMARK 200 RESOLUTION RANGE LOW (A) : 91.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 25.60 REMARK 200 R MERGE (I) : 0.48700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 20.50 REMARK 200 R MERGE FOR SHELL (I) : 2.22500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.5MG/ML IN 0.1M SODIUM CACODYLATE REMARK 280 TETRAHYDRATE PH 6.4, 14% PEG SMEAR BROAD, 0.2M CACL2, 5% REMARK 280 GLYCEROL ., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.09650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 64.86550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 64.86550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.04825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 64.86550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 64.86550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 90.14475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 64.86550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.86550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.04825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 64.86550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.86550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 90.14475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.09650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 40 REMARK 465 GLY A 295 REMARK 465 GLY A 296 REMARK 465 THR A 297 REMARK 465 GLY A 298 REMARK 465 GLY A 299 REMARK 465 SER A 300 REMARK 465 GLY A 301 REMARK 465 GLY A 302 REMARK 465 SER A 303 REMARK 465 GLY A 304 REMARK 465 LEU A 305 REMARK 465 ASN A 306 REMARK 465 ASP A 307 REMARK 465 ILE A 308 REMARK 465 PHE A 309 REMARK 465 GLU A 310 REMARK 465 ALA A 311 REMARK 465 GLN A 312 REMARK 465 LYS A 313 REMARK 465 ILE A 314 REMARK 465 GLU A 315 REMARK 465 TRP A 316 REMARK 465 HIS A 317 REMARK 465 GLU A 318 REMARK 465 GLY A 319 REMARK 465 ARG A 320 REMARK 465 THR A 321 REMARK 465 LYS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 GLU B 40 REMARK 465 VAL B 235 REMARK 465 LYS B 236 REMARK 465 CYS B 237 REMARK 465 VAL B 238 REMARK 465 TYR B 239 REMARK 465 PRO B 240 REMARK 465 ALA B 241 REMARK 465 ILE B 242 REMARK 465 GLU B 243 REMARK 465 HIS B 244 REMARK 465 GLY B 245 REMARK 465 THR B 246 REMARK 465 ILE B 247 REMARK 465 VAL B 248 REMARK 465 SER B 249 REMARK 465 GLY B 250 REMARK 465 PHE B 251 REMARK 465 GLY B 252 REMARK 465 PRO B 253 REMARK 465 LYS B 254 REMARK 465 TYR B 255 REMARK 465 TYR B 256 REMARK 465 TYR B 257 REMARK 465 LYS B 258 REMARK 465 ALA B 259 REMARK 465 THR B 260 REMARK 465 VAL B 261 REMARK 465 VAL B 262 REMARK 465 LEU B 263 REMARK 465 LYS B 264 REMARK 465 CYS B 265 REMARK 465 ASN B 266 REMARK 465 GLU B 267 REMARK 465 GLY B 268 REMARK 465 PHE B 269 REMARK 465 ASN B 270 REMARK 465 LEU B 271 REMARK 465 TYR B 272 REMARK 465 GLY B 273 REMARK 465 ASN B 274 REMARK 465 SER B 275 REMARK 465 VAL B 276 REMARK 465 VAL B 277 REMARK 465 VAL B 278 REMARK 465 CYS B 279 REMARK 465 GLY B 280 REMARK 465 GLU B 281 REMARK 465 ASN B 282 REMARK 465 SER B 283 REMARK 465 THR B 284 REMARK 465 TRP B 285 REMARK 465 GLU B 286 REMARK 465 PRO B 287 REMARK 465 GLU B 288 REMARK 465 LEU B 289 REMARK 465 PRO B 290 REMARK 465 LYS B 291 REMARK 465 CYS B 292 REMARK 465 ILE B 293 REMARK 465 LYS B 294 REMARK 465 GLY B 295 REMARK 465 GLY B 296 REMARK 465 THR B 297 REMARK 465 GLY B 298 REMARK 465 GLY B 299 REMARK 465 SER B 300 REMARK 465 GLY B 301 REMARK 465 GLY B 302 REMARK 465 SER B 303 REMARK 465 GLY B 304 REMARK 465 LEU B 305 REMARK 465 ASN B 306 REMARK 465 ASP B 307 REMARK 465 ILE B 308 REMARK 465 PHE B 309 REMARK 465 GLU B 310 REMARK 465 ALA B 311 REMARK 465 GLN B 312 REMARK 465 LYS B 313 REMARK 465 ILE B 314 REMARK 465 GLU B 315 REMARK 465 TRP B 316 REMARK 465 HIS B 317 REMARK 465 GLU B 318 REMARK 465 GLY B 319 REMARK 465 ARG B 320 REMARK 465 THR B 321 REMARK 465 LYS B 322 REMARK 465 HIS B 323 REMARK 465 HIS B 324 REMARK 465 HIS B 325 REMARK 465 HIS B 326 REMARK 465 HIS B 327 REMARK 465 HIS B 328 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 104 CB - CG - CD ANGL. DEV. = 17.0 DEGREES REMARK 500 LEU A 142 CA - CB - CG ANGL. DEV. = -17.7 DEGREES REMARK 500 CYS A 171 CA - CB - SG ANGL. DEV. = 8.6 DEGREES REMARK 500 CYS B 89 CA - CB - SG ANGL. DEV. = 6.9 DEGREES REMARK 500 LEU B 110 CB - CG - CD2 ANGL. DEV. = -13.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 287 -158.38 -83.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 8CJV A 43 295 UNP Q6VE48 MCP_BOVIN 43 295 DBREF 8CJV B 43 295 UNP Q6VE48 MCP_BOVIN 43 295 SEQADV 8CJV GLU A 40 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV THR A 41 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 42 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ARG A 73 UNP Q6VE48 HIS 73 CONFLICT SEQADV 8CJV ALA A 126 UNP Q6VE48 GLU 126 CONFLICT SEQADV 8CJV ASN A 185 UNP Q6VE48 SER 185 CONFLICT SEQADV 8CJV GLY A 296 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV THR A 297 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 298 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 299 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV SER A 300 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 301 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 302 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV SER A 303 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 304 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV LEU A 305 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ASN A 306 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ASP A 307 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ILE A 308 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV PHE A 309 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU A 310 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ALA A 311 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLN A 312 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV LYS A 313 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ILE A 314 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU A 315 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV TRP A 316 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 317 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU A 318 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY A 319 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ARG A 320 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV THR A 321 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV LYS A 322 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 323 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 324 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 325 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 326 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 327 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS A 328 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU B 40 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV THR B 41 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 42 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ARG B 73 UNP Q6VE48 HIS 73 CONFLICT SEQADV 8CJV ALA B 126 UNP Q6VE48 GLU 126 CONFLICT SEQADV 8CJV ASN B 185 UNP Q6VE48 SER 185 CONFLICT SEQADV 8CJV GLY B 296 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV THR B 297 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 298 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 299 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV SER B 300 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 301 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 302 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV SER B 303 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 304 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV LEU B 305 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ASN B 306 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ASP B 307 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ILE B 308 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV PHE B 309 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU B 310 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ALA B 311 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLN B 312 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV LYS B 313 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ILE B 314 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU B 315 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV TRP B 316 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 317 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLU B 318 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV GLY B 319 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV ARG B 320 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV THR B 321 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV LYS B 322 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 323 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 324 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 325 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 326 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 327 UNP Q6VE48 EXPRESSION TAG SEQADV 8CJV HIS B 328 UNP Q6VE48 EXPRESSION TAG SEQRES 1 A 289 GLU THR GLY CYS ASP ASP PRO PRO ARG PHE VAL SER MET SEQRES 2 A 289 LYS PRO GLN GLY THR LEU LYS PRO SER TYR SER PRO GLY SEQRES 3 A 289 GLU GLN ILE VAL TYR GLU CYS ARG LEU GLY PHE GLN PRO SEQRES 4 A 289 VAL THR PRO GLY GLN VAL LEU ALA LEU VAL CYS GLN ASP SEQRES 5 A 289 ASN ASN THR TRP SER SER LEU GLN GLU GLY CYS LYS LYS SEQRES 6 A 289 ARG ARG CYS PRO THR LEU ALA ASP PRO THR ASN GLY GLN SEQRES 7 A 289 VAL ILE LEU VAL ASN GLY SER THR ALA PHE GLY SER GLU SEQRES 8 A 289 VAL HIS TYR VAL CYS ASN ASN GLY TYR TYR LEU LEU GLY SEQRES 9 A 289 THR ASN ILE SER TYR CYS GLU VAL SER SER GLY THR GLY SEQRES 10 A 289 VAL ASN TRP SER ASP ASN PRO PRO THR CYS GLU LYS ILE SEQRES 11 A 289 LEU CYS GLN PRO PRO PRO GLU ILE GLN ASN GLY LYS TYR SEQRES 12 A 289 THR ASN ASN HIS LYS ASP VAL PHE GLU TYR ASN GLU VAL SEQRES 13 A 289 VAL THR TYR SER CYS ASP PRO SER ASN GLY PRO ASP GLU SEQRES 14 A 289 TYR SER LEU VAL GLY GLU SER LYS LEU THR CYS ILE GLY SEQRES 15 A 289 ASN GLY GLU TRP SER SER GLN PRO PRO GLN CYS LYS VAL SEQRES 16 A 289 VAL LYS CYS VAL TYR PRO ALA ILE GLU HIS GLY THR ILE SEQRES 17 A 289 VAL SER GLY PHE GLY PRO LYS TYR TYR TYR LYS ALA THR SEQRES 18 A 289 VAL VAL LEU LYS CYS ASN GLU GLY PHE ASN LEU TYR GLY SEQRES 19 A 289 ASN SER VAL VAL VAL CYS GLY GLU ASN SER THR TRP GLU SEQRES 20 A 289 PRO GLU LEU PRO LYS CYS ILE LYS GLY GLY THR GLY GLY SEQRES 21 A 289 SER GLY GLY SER GLY LEU ASN ASP ILE PHE GLU ALA GLN SEQRES 22 A 289 LYS ILE GLU TRP HIS GLU GLY ARG THR LYS HIS HIS HIS SEQRES 23 A 289 HIS HIS HIS SEQRES 1 B 289 GLU THR GLY CYS ASP ASP PRO PRO ARG PHE VAL SER MET SEQRES 2 B 289 LYS PRO GLN GLY THR LEU LYS PRO SER TYR SER PRO GLY SEQRES 3 B 289 GLU GLN ILE VAL TYR GLU CYS ARG LEU GLY PHE GLN PRO SEQRES 4 B 289 VAL THR PRO GLY GLN VAL LEU ALA LEU VAL CYS GLN ASP SEQRES 5 B 289 ASN ASN THR TRP SER SER LEU GLN GLU GLY CYS LYS LYS SEQRES 6 B 289 ARG ARG CYS PRO THR LEU ALA ASP PRO THR ASN GLY GLN SEQRES 7 B 289 VAL ILE LEU VAL ASN GLY SER THR ALA PHE GLY SER GLU SEQRES 8 B 289 VAL HIS TYR VAL CYS ASN ASN GLY TYR TYR LEU LEU GLY SEQRES 9 B 289 THR ASN ILE SER TYR CYS GLU VAL SER SER GLY THR GLY SEQRES 10 B 289 VAL ASN TRP SER ASP ASN PRO PRO THR CYS GLU LYS ILE SEQRES 11 B 289 LEU CYS GLN PRO PRO PRO GLU ILE GLN ASN GLY LYS TYR SEQRES 12 B 289 THR ASN ASN HIS LYS ASP VAL PHE GLU TYR ASN GLU VAL SEQRES 13 B 289 VAL THR TYR SER CYS ASP PRO SER ASN GLY PRO ASP GLU SEQRES 14 B 289 TYR SER LEU VAL GLY GLU SER LYS LEU THR CYS ILE GLY SEQRES 15 B 289 ASN GLY GLU TRP SER SER GLN PRO PRO GLN CYS LYS VAL SEQRES 16 B 289 VAL LYS CYS VAL TYR PRO ALA ILE GLU HIS GLY THR ILE SEQRES 17 B 289 VAL SER GLY PHE GLY PRO LYS TYR TYR TYR LYS ALA THR SEQRES 18 B 289 VAL VAL LEU LYS CYS ASN GLU GLY PHE ASN LEU TYR GLY SEQRES 19 B 289 ASN SER VAL VAL VAL CYS GLY GLU ASN SER THR TRP GLU SEQRES 20 B 289 PRO GLU LEU PRO LYS CYS ILE LYS GLY GLY THR GLY GLY SEQRES 21 B 289 SER GLY GLY SER GLY LEU ASN ASP ILE PHE GLU ALA GLN SEQRES 22 B 289 LYS ILE GLU TRP HIS GLU GLY ARG THR LYS HIS HIS HIS SEQRES 23 B 289 HIS HIS HIS HET NAG A 401 14 HET NAG A 402 14 HET NAG B 401 14 HET NAG B 402 14 HET NAG B 403 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 5(C8 H15 N O6) SHEET 1 AA1 3 MET A 52 PRO A 54 0 SHEET 2 AA1 3 GLN A 67 CYS A 72 -1 O GLU A 71 N LYS A 53 SHEET 3 AA1 3 LEU A 85 VAL A 88 -1 O LEU A 85 N TYR A 70 SHEET 1 AA2 2 PHE A 76 PRO A 78 0 SHEET 2 AA2 2 CYS A 102 LYS A 104 -1 O LYS A 103 N GLN A 77 SHEET 1 AA3 4 GLY A 116 ILE A 119 0 SHEET 2 AA3 4 GLU A 130 CYS A 135 -1 O HIS A 132 N ILE A 119 SHEET 3 AA3 4 ILE A 146 GLU A 150 -1 O SER A 147 N VAL A 131 SHEET 4 AA3 4 ASN A 158 TRP A 159 -1 O ASN A 158 N GLU A 150 SHEET 1 AA4 2 TYR A 139 LEU A 142 0 SHEET 2 AA4 2 THR A 165 LYS A 168 -1 O GLU A 167 N TYR A 140 SHEET 1 AA5 3 GLY A 180 TYR A 182 0 SHEET 2 AA5 3 VAL A 195 CYS A 200 -1 O SER A 199 N LYS A 181 SHEET 3 AA5 3 LYS A 216 THR A 218 -1 O LEU A 217 N VAL A 196 SHEET 1 AA6 2 SER A 210 LEU A 211 0 SHEET 2 AA6 2 CYS A 232 LYS A 233 -1 O LYS A 233 N SER A 210 SHEET 1 AA7 2 LYS A 236 CYS A 237 0 SHEET 2 AA7 2 TYR A 255 TYR A 256 -1 O TYR A 255 N CYS A 237 SHEET 1 AA8 4 GLY A 245 ILE A 247 0 SHEET 2 AA8 4 THR A 260 CYS A 265 -1 O LYS A 264 N THR A 246 SHEET 3 AA8 4 VAL A 276 CYS A 279 -1 O VAL A 277 N VAL A 261 SHEET 4 AA8 4 TRP A 285 GLU A 286 -1 O GLU A 286 N VAL A 278 SHEET 1 AA9 2 ASN A 270 LEU A 271 0 SHEET 2 AA9 2 CYS A 292 ILE A 293 -1 O ILE A 293 N ASN A 270 SHEET 1 AB1 3 MET B 52 PRO B 54 0 SHEET 2 AB1 3 GLN B 67 CYS B 72 -1 O GLU B 71 N LYS B 53 SHEET 3 AB1 3 ALA B 86 VAL B 88 -1 O LEU B 87 N ILE B 68 SHEET 1 AB2 2 PHE B 76 PRO B 78 0 SHEET 2 AB2 2 CYS B 102 LYS B 104 -1 O LYS B 103 N GLN B 77 SHEET 1 AB3 4 GLY B 116 ILE B 119 0 SHEET 2 AB3 4 GLU B 130 CYS B 135 -1 O HIS B 132 N ILE B 119 SHEET 3 AB3 4 ILE B 146 GLU B 150 -1 O SER B 147 N VAL B 131 SHEET 4 AB3 4 ASN B 158 TRP B 159 -1 O ASN B 158 N GLU B 150 SHEET 1 AB4 2 TYR B 139 LEU B 142 0 SHEET 2 AB4 2 THR B 165 LYS B 168 -1 O THR B 165 N LEU B 142 SHEET 1 AB5 3 GLY B 180 TYR B 182 0 SHEET 2 AB5 3 VAL B 195 CYS B 200 -1 O SER B 199 N LYS B 181 SHEET 3 AB5 3 LYS B 216 THR B 218 -1 O LEU B 217 N VAL B 196 SHEET 1 AB6 2 SER B 210 VAL B 212 0 SHEET 2 AB6 2 GLN B 231 LYS B 233 -1 O GLN B 231 N VAL B 212 SSBOND 1 CYS A 43 CYS A 89 1555 1555 2.04 SSBOND 2 CYS A 72 CYS A 102 1555 1555 2.05 SSBOND 3 CYS A 107 CYS A 149 1555 1555 2.04 SSBOND 4 CYS A 135 CYS A 166 1555 1555 2.03 SSBOND 5 CYS A 171 CYS A 219 1555 1555 2.03 SSBOND 6 CYS A 200 CYS A 232 1555 1555 2.03 SSBOND 7 CYS A 237 CYS A 279 1555 1555 2.06 SSBOND 8 CYS A 265 CYS A 292 1555 1555 2.05 SSBOND 9 CYS B 43 CYS B 89 1555 1555 2.04 SSBOND 10 CYS B 72 CYS B 102 1555 1555 2.10 SSBOND 11 CYS B 107 CYS B 149 1555 1555 2.07 SSBOND 12 CYS B 135 CYS B 166 1555 1555 2.05 SSBOND 13 CYS B 171 CYS B 219 1555 1555 2.03 SSBOND 14 CYS B 200 CYS B 232 1555 1555 2.04 LINK ND2 ASN A 122 C1 NAG A 401 1555 1555 1.43 LINK ND2 ASN A 145 C1 NAG A 402 1555 1555 1.39 LINK ND2 ASN B 92 C1 NAG B 402 1555 1555 1.45 LINK ND2 ASN B 122 C1 NAG B 401 1555 1555 1.48 LINK ND2 ASN B 145 C1 NAG B 403 1555 1555 1.42 CISPEP 1 GLU A 286 PRO A 287 0 3.26 CRYST1 129.731 129.731 120.193 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007708 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007708 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008320 0.00000