data_8CKK # _entry.id 8CKK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8CKK pdb_00008ckk 10.2210/pdb8ckk/pdb WWPDB D_1292127724 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8CKK _pdbx_database_status.recvd_initial_deposition_date 2023-02-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email yvonne.jones@strubi.ox.ac.uk _pdbx_contact_author.name_first E.Yvonne _pdbx_contact_author.name_last Jones _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-3834-1893 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nagy, G.N.' 1 0000-0003-1761-5610 'Duman, R.' 2 ? 'Harlos, K.' 3 ? 'El Omari, K.' 4 ? 'Wagner, A.' 5 ? 'Jones, E.Y.' 6 0000-0002-3834-1893 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Semaphorin-5A TSR 3-4 domains in complex with nitrate' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nagy, G.N.' 1 0000-0003-1761-5610 primary 'Duman, R.' 2 ? primary 'Harlos, K.' 3 ? primary 'El Omari, K.' 4 ? primary 'Wagner, A.' 5 ? primary 'Jones, E.Y.' 6 0000-0002-3834-1893 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Semaphorin-5A 14054.702 2 ? ? ? ;N-terminal 'ET' peptide and C-terminal 'GTLEVLFQ' peptides are recombinant additions encoded by the expression vector. ; 2 non-polymer syn alpha-D-mannopyranose 180.156 4 ? ? ? ? 3 non-polymer syn 'NITRATE ION' 62.005 17 ? ? ? ? 4 water nat water 18.015 169 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Semaphorin-F,Sema F' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ETGPHMFWTGWGPWERCTAQCGGGIQARRRICENGPDCAGCNVEYQSCNTNPCPELKKTTPWTPWTPVNISDNGGHYEQR FRYTCKARLADPNLLEVGRQRIEMRYCSSDGTSGCSTGTLEVLFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;ETGPHMFWTGWGPWERCTAQCGGGIQARRRICENGPDCAGCNVEYQSCNTNPCPELKKTTPWTPWTPVNISDNGGHYEQR FRYTCKARLADPNLLEVGRQRIEMRYCSSDGTSGCSTGTLEVLFQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 alpha-D-mannopyranose MAN 3 'NITRATE ION' NO3 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 THR n 1 3 GLY n 1 4 PRO n 1 5 HIS n 1 6 MET n 1 7 PHE n 1 8 TRP n 1 9 THR n 1 10 GLY n 1 11 TRP n 1 12 GLY n 1 13 PRO n 1 14 TRP n 1 15 GLU n 1 16 ARG n 1 17 CYS n 1 18 THR n 1 19 ALA n 1 20 GLN n 1 21 CYS n 1 22 GLY n 1 23 GLY n 1 24 GLY n 1 25 ILE n 1 26 GLN n 1 27 ALA n 1 28 ARG n 1 29 ARG n 1 30 ARG n 1 31 ILE n 1 32 CYS n 1 33 GLU n 1 34 ASN n 1 35 GLY n 1 36 PRO n 1 37 ASP n 1 38 CYS n 1 39 ALA n 1 40 GLY n 1 41 CYS n 1 42 ASN n 1 43 VAL n 1 44 GLU n 1 45 TYR n 1 46 GLN n 1 47 SER n 1 48 CYS n 1 49 ASN n 1 50 THR n 1 51 ASN n 1 52 PRO n 1 53 CYS n 1 54 PRO n 1 55 GLU n 1 56 LEU n 1 57 LYS n 1 58 LYS n 1 59 THR n 1 60 THR n 1 61 PRO n 1 62 TRP n 1 63 THR n 1 64 PRO n 1 65 TRP n 1 66 THR n 1 67 PRO n 1 68 VAL n 1 69 ASN n 1 70 ILE n 1 71 SER n 1 72 ASP n 1 73 ASN n 1 74 GLY n 1 75 GLY n 1 76 HIS n 1 77 TYR n 1 78 GLU n 1 79 GLN n 1 80 ARG n 1 81 PHE n 1 82 ARG n 1 83 TYR n 1 84 THR n 1 85 CYS n 1 86 LYS n 1 87 ALA n 1 88 ARG n 1 89 LEU n 1 90 ALA n 1 91 ASP n 1 92 PRO n 1 93 ASN n 1 94 LEU n 1 95 LEU n 1 96 GLU n 1 97 VAL n 1 98 GLY n 1 99 ARG n 1 100 GLN n 1 101 ARG n 1 102 ILE n 1 103 GLU n 1 104 MET n 1 105 ARG n 1 106 TYR n 1 107 CYS n 1 108 SER n 1 109 SER n 1 110 ASP n 1 111 GLY n 1 112 THR n 1 113 SER n 1 114 GLY n 1 115 CYS n 1 116 SER n 1 117 THR n 1 118 GLY n 1 119 THR n 1 120 LEU n 1 121 GLU n 1 122 VAL n 1 123 LEU n 1 124 PHE n 1 125 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 125 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SEMA5A, SEMAF' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293T _entity_src_gen.pdbx_host_org_atcc CRL-3216 _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pHL-sec _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 649 ? ? ? A . n A 1 2 THR 2 650 ? ? ? A . n A 1 3 GLY 3 651 651 GLY GLY A . n A 1 4 PRO 4 652 652 PRO PRO A . n A 1 5 HIS 5 653 653 HIS HIS A . n A 1 6 MET 6 654 654 MET MET A . n A 1 7 PHE 7 655 655 PHE PHE A . n A 1 8 TRP 8 656 656 TRP TRP A . n A 1 9 THR 9 657 657 THR THR A . n A 1 10 GLY 10 658 658 GLY GLY A . n A 1 11 TRP 11 659 659 TRP TRP A . n A 1 12 GLY 12 660 660 GLY GLY A . n A 1 13 PRO 13 661 661 PRO PRO A . n A 1 14 TRP 14 662 662 TRP TRP A . n A 1 15 GLU 15 663 663 GLU GLU A . n A 1 16 ARG 16 664 664 ARG ARG A . n A 1 17 CYS 17 665 665 CYS CYS A . n A 1 18 THR 18 666 666 THR THR A . n A 1 19 ALA 19 667 667 ALA ALA A . n A 1 20 GLN 20 668 668 GLN GLN A . n A 1 21 CYS 21 669 669 CYS CYS A . n A 1 22 GLY 22 670 670 GLY GLY A . n A 1 23 GLY 23 671 671 GLY GLY A . n A 1 24 GLY 24 672 672 GLY GLY A . n A 1 25 ILE 25 673 673 ILE ILE A . n A 1 26 GLN 26 674 674 GLN GLN A . n A 1 27 ALA 27 675 675 ALA ALA A . n A 1 28 ARG 28 676 676 ARG ARG A . n A 1 29 ARG 29 677 677 ARG ARG A . n A 1 30 ARG 30 678 678 ARG ARG A . n A 1 31 ILE 31 679 679 ILE ILE A . n A 1 32 CYS 32 680 680 CYS CYS A . n A 1 33 GLU 33 681 681 GLU GLU A . n A 1 34 ASN 34 682 682 ASN ASN A . n A 1 35 GLY 35 683 683 GLY GLY A . n A 1 36 PRO 36 684 684 PRO PRO A . n A 1 37 ASP 37 685 685 ASP ASP A . n A 1 38 CYS 38 686 686 CYS CYS A . n A 1 39 ALA 39 687 687 ALA ALA A . n A 1 40 GLY 40 688 688 GLY GLY A . n A 1 41 CYS 41 689 689 CYS CYS A . n A 1 42 ASN 42 690 690 ASN ASN A . n A 1 43 VAL 43 691 691 VAL VAL A . n A 1 44 GLU 44 692 692 GLU GLU A . n A 1 45 TYR 45 693 693 TYR TYR A . n A 1 46 GLN 46 694 694 GLN GLN A . n A 1 47 SER 47 695 695 SER SER A . n A 1 48 CYS 48 696 696 CYS CYS A . n A 1 49 ASN 49 697 697 ASN ASN A . n A 1 50 THR 50 698 698 THR THR A . n A 1 51 ASN 51 699 699 ASN ASN A . n A 1 52 PRO 52 700 700 PRO PRO A . n A 1 53 CYS 53 701 701 CYS CYS A . n A 1 54 PRO 54 702 702 PRO PRO A . n A 1 55 GLU 55 703 703 GLU GLU A . n A 1 56 LEU 56 704 704 LEU LEU A . n A 1 57 LYS 57 705 705 LYS LYS A . n A 1 58 LYS 58 706 706 LYS LYS A . n A 1 59 THR 59 707 707 THR THR A . n A 1 60 THR 60 708 708 THR THR A . n A 1 61 PRO 61 709 709 PRO PRO A . n A 1 62 TRP 62 710 710 TRP TRP A . n A 1 63 THR 63 711 711 THR THR A . n A 1 64 PRO 64 712 712 PRO PRO A . n A 1 65 TRP 65 713 713 TRP TRP A . n A 1 66 THR 66 714 714 THR THR A . n A 1 67 PRO 67 715 715 PRO PRO A . n A 1 68 VAL 68 716 716 VAL VAL A . n A 1 69 ASN 69 717 717 ASN ASN A . n A 1 70 ILE 70 718 718 ILE ILE A . n A 1 71 SER 71 719 719 SER SER A . n A 1 72 ASP 72 720 720 ASP ASP A . n A 1 73 ASN 73 721 721 ASN ASN A . n A 1 74 GLY 74 722 722 GLY GLY A . n A 1 75 GLY 75 723 723 GLY GLY A . n A 1 76 HIS 76 724 724 HIS HIS A . n A 1 77 TYR 77 725 725 TYR TYR A . n A 1 78 GLU 78 726 726 GLU GLU A . n A 1 79 GLN 79 727 727 GLN GLN A . n A 1 80 ARG 80 728 728 ARG ARG A . n A 1 81 PHE 81 729 729 PHE PHE A . n A 1 82 ARG 82 730 730 ARG ARG A . n A 1 83 TYR 83 731 731 TYR TYR A . n A 1 84 THR 84 732 732 THR THR A . n A 1 85 CYS 85 733 733 CYS CYS A . n A 1 86 LYS 86 734 734 LYS LYS A . n A 1 87 ALA 87 735 735 ALA ALA A . n A 1 88 ARG 88 736 736 ARG ARG A . n A 1 89 LEU 89 737 737 LEU LEU A . n A 1 90 ALA 90 738 738 ALA ALA A . n A 1 91 ASP 91 739 739 ASP ASP A . n A 1 92 PRO 92 740 740 PRO PRO A . n A 1 93 ASN 93 741 741 ASN ASN A . n A 1 94 LEU 94 742 742 LEU LEU A . n A 1 95 LEU 95 743 743 LEU LEU A . n A 1 96 GLU 96 744 744 GLU GLU A . n A 1 97 VAL 97 745 745 VAL VAL A . n A 1 98 GLY 98 746 746 GLY GLY A . n A 1 99 ARG 99 747 747 ARG ARG A . n A 1 100 GLN 100 748 748 GLN GLN A . n A 1 101 ARG 101 749 749 ARG ARG A . n A 1 102 ILE 102 750 750 ILE ILE A . n A 1 103 GLU 103 751 751 GLU GLU A . n A 1 104 MET 104 752 752 MET MET A . n A 1 105 ARG 105 753 753 ARG ARG A . n A 1 106 TYR 106 754 754 TYR TYR A . n A 1 107 CYS 107 755 755 CYS CYS A . n A 1 108 SER 108 756 756 SER SER A . n A 1 109 SER 109 757 757 SER SER A . n A 1 110 ASP 110 758 758 ASP ASP A . n A 1 111 GLY 111 759 759 GLY GLY A . n A 1 112 THR 112 760 760 THR THR A . n A 1 113 SER 113 761 761 SER SER A . n A 1 114 GLY 114 762 762 GLY GLY A . n A 1 115 CYS 115 763 763 CYS CYS A . n A 1 116 SER 116 764 ? ? ? A . n A 1 117 THR 117 765 ? ? ? A . n A 1 118 GLY 118 766 ? ? ? A . n A 1 119 THR 119 767 ? ? ? A . n A 1 120 LEU 120 768 ? ? ? A . n A 1 121 GLU 121 769 ? ? ? A . n A 1 122 VAL 122 770 ? ? ? A . n A 1 123 LEU 123 771 ? ? ? A . n A 1 124 PHE 124 772 ? ? ? A . n A 1 125 GLN 125 773 ? ? ? A . n B 1 1 GLU 1 649 ? ? ? B . n B 1 2 THR 2 650 ? ? ? B . n B 1 3 GLY 3 651 ? ? ? B . n B 1 4 PRO 4 652 652 PRO PRO B . n B 1 5 HIS 5 653 653 HIS HIS B . n B 1 6 MET 6 654 654 MET MET B . n B 1 7 PHE 7 655 655 PHE PHE B . n B 1 8 TRP 8 656 656 TRP TRP B . n B 1 9 THR 9 657 657 THR THR B . n B 1 10 GLY 10 658 658 GLY GLY B . n B 1 11 TRP 11 659 659 TRP TRP B . n B 1 12 GLY 12 660 660 GLY GLY B . n B 1 13 PRO 13 661 661 PRO PRO B . n B 1 14 TRP 14 662 662 TRP TRP B . n B 1 15 GLU 15 663 663 GLU GLU B . n B 1 16 ARG 16 664 664 ARG ARG B . n B 1 17 CYS 17 665 665 CYS CYS B . n B 1 18 THR 18 666 666 THR THR B . n B 1 19 ALA 19 667 667 ALA ALA B . n B 1 20 GLN 20 668 668 GLN GLN B . n B 1 21 CYS 21 669 669 CYS CYS B . n B 1 22 GLY 22 670 670 GLY GLY B . n B 1 23 GLY 23 671 671 GLY GLY B . n B 1 24 GLY 24 672 672 GLY GLY B . n B 1 25 ILE 25 673 673 ILE ILE B . n B 1 26 GLN 26 674 674 GLN GLN B . n B 1 27 ALA 27 675 675 ALA ALA B . n B 1 28 ARG 28 676 676 ARG ARG B . n B 1 29 ARG 29 677 677 ARG ARG B . n B 1 30 ARG 30 678 678 ARG ARG B . n B 1 31 ILE 31 679 679 ILE ILE B . n B 1 32 CYS 32 680 680 CYS CYS B . n B 1 33 GLU 33 681 681 GLU GLU B . n B 1 34 ASN 34 682 682 ASN ASN B . n B 1 35 GLY 35 683 683 GLY GLY B . n B 1 36 PRO 36 684 684 PRO PRO B . n B 1 37 ASP 37 685 685 ASP ASP B . n B 1 38 CYS 38 686 686 CYS CYS B . n B 1 39 ALA 39 687 687 ALA ALA B . n B 1 40 GLY 40 688 688 GLY GLY B . n B 1 41 CYS 41 689 689 CYS CYS B . n B 1 42 ASN 42 690 690 ASN ASN B . n B 1 43 VAL 43 691 691 VAL VAL B . n B 1 44 GLU 44 692 692 GLU GLU B . n B 1 45 TYR 45 693 693 TYR TYR B . n B 1 46 GLN 46 694 694 GLN GLN B . n B 1 47 SER 47 695 695 SER SER B . n B 1 48 CYS 48 696 696 CYS CYS B . n B 1 49 ASN 49 697 697 ASN ASN B . n B 1 50 THR 50 698 698 THR THR B . n B 1 51 ASN 51 699 699 ASN ASN B . n B 1 52 PRO 52 700 700 PRO PRO B . n B 1 53 CYS 53 701 701 CYS CYS B . n B 1 54 PRO 54 702 702 PRO PRO B . n B 1 55 GLU 55 703 703 GLU GLU B . n B 1 56 LEU 56 704 704 LEU LEU B . n B 1 57 LYS 57 705 705 LYS LYS B . n B 1 58 LYS 58 706 706 LYS LYS B . n B 1 59 THR 59 707 707 THR THR B . n B 1 60 THR 60 708 708 THR THR B . n B 1 61 PRO 61 709 709 PRO PRO B . n B 1 62 TRP 62 710 710 TRP TRP B . n B 1 63 THR 63 711 711 THR THR B . n B 1 64 PRO 64 712 712 PRO PRO B . n B 1 65 TRP 65 713 713 TRP TRP B . n B 1 66 THR 66 714 714 THR THR B . n B 1 67 PRO 67 715 715 PRO PRO B . n B 1 68 VAL 68 716 716 VAL VAL B . n B 1 69 ASN 69 717 717 ASN ASN B . n B 1 70 ILE 70 718 718 ILE ILE B . n B 1 71 SER 71 719 719 SER SER B . n B 1 72 ASP 72 720 720 ASP ASP B . n B 1 73 ASN 73 721 721 ASN ASN B . n B 1 74 GLY 74 722 722 GLY GLY B . n B 1 75 GLY 75 723 723 GLY GLY B . n B 1 76 HIS 76 724 724 HIS HIS B . n B 1 77 TYR 77 725 725 TYR TYR B . n B 1 78 GLU 78 726 726 GLU GLU B . n B 1 79 GLN 79 727 727 GLN GLN B . n B 1 80 ARG 80 728 728 ARG ARG B . n B 1 81 PHE 81 729 729 PHE PHE B . n B 1 82 ARG 82 730 730 ARG ARG B . n B 1 83 TYR 83 731 731 TYR TYR B . n B 1 84 THR 84 732 732 THR THR B . n B 1 85 CYS 85 733 733 CYS CYS B . n B 1 86 LYS 86 734 734 LYS LYS B . n B 1 87 ALA 87 735 735 ALA ALA B . n B 1 88 ARG 88 736 736 ARG ARG B . n B 1 89 LEU 89 737 737 LEU LEU B . n B 1 90 ALA 90 738 738 ALA ALA B . n B 1 91 ASP 91 739 739 ASP ASP B . n B 1 92 PRO 92 740 740 PRO PRO B . n B 1 93 ASN 93 741 741 ASN ASN B . n B 1 94 LEU 94 742 742 LEU LEU B . n B 1 95 LEU 95 743 743 LEU LEU B . n B 1 96 GLU 96 744 744 GLU GLU B . n B 1 97 VAL 97 745 745 VAL VAL B . n B 1 98 GLY 98 746 746 GLY GLY B . n B 1 99 ARG 99 747 747 ARG ARG B . n B 1 100 GLN 100 748 748 GLN GLN B . n B 1 101 ARG 101 749 749 ARG ARG B . n B 1 102 ILE 102 750 750 ILE ILE B . n B 1 103 GLU 103 751 751 GLU GLU B . n B 1 104 MET 104 752 752 MET MET B . n B 1 105 ARG 105 753 753 ARG ARG B . n B 1 106 TYR 106 754 754 TYR TYR B . n B 1 107 CYS 107 755 755 CYS CYS B . n B 1 108 SER 108 756 756 SER SER B . n B 1 109 SER 109 757 757 SER SER B . n B 1 110 ASP 110 758 758 ASP ASP B . n B 1 111 GLY 111 759 759 GLY GLY B . n B 1 112 THR 112 760 760 THR THR B . n B 1 113 SER 113 761 761 SER SER B . n B 1 114 GLY 114 762 762 GLY GLY B . n B 1 115 CYS 115 763 763 CYS CYS B . n B 1 116 SER 116 764 764 SER SER B . n B 1 117 THR 117 765 765 THR THR B . n B 1 118 GLY 118 766 766 GLY GLY B . n B 1 119 THR 119 767 767 THR THR B . n B 1 120 LEU 120 768 768 LEU LEU B . n B 1 121 GLU 121 769 769 GLU GLU B . n B 1 122 VAL 122 770 770 VAL VAL B . n B 1 123 LEU 123 771 771 LEU LEU B . n B 1 124 PHE 124 772 772 PHE PHE B . n B 1 125 GLN 125 773 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MAN 1 801 1 MAN MAN A . D 3 NO3 1 802 1 NO3 NO3 A . E 3 NO3 1 803 2 NO3 NO3 A . F 3 NO3 1 804 3 NO3 NO3 A . G 3 NO3 1 805 4 NO3 NO3 A . H 3 NO3 1 806 5 NO3 NO3 A . I 3 NO3 1 807 6 NO3 NO3 A . J 3 NO3 1 808 7 NO3 NO3 A . K 3 NO3 1 809 10 NO3 NO3 A . L 3 NO3 1 810 17 NO3 NO3 A . M 2 MAN 1 811 1 MAN MAN A . N 3 NO3 1 801 8 NO3 NO3 B . O 3 NO3 1 802 9 NO3 NO3 B . P 3 NO3 1 803 11 NO3 NO3 B . Q 3 NO3 1 804 12 NO3 NO3 B . R 3 NO3 1 805 13 NO3 NO3 B . S 3 NO3 1 806 14 NO3 NO3 B . T 3 NO3 1 807 15 NO3 NO3 B . U 3 NO3 1 808 16 NO3 NO3 B . V 2 MAN 1 809 1 MAN MAN B . W 2 MAN 1 810 1 MAN MAN B . X 4 HOH 1 901 112 HOH HOH A . X 4 HOH 2 902 8 HOH HOH A . X 4 HOH 3 903 16 HOH HOH A . X 4 HOH 4 904 36 HOH HOH A . X 4 HOH 5 905 96 HOH HOH A . X 4 HOH 6 906 52 HOH HOH A . X 4 HOH 7 907 73 HOH HOH A . X 4 HOH 8 908 40 HOH HOH A . X 4 HOH 9 909 164 HOH HOH A . X 4 HOH 10 910 23 HOH HOH A . X 4 HOH 11 911 101 HOH HOH A . X 4 HOH 12 912 81 HOH HOH A . X 4 HOH 13 913 22 HOH HOH A . X 4 HOH 14 914 32 HOH HOH A . X 4 HOH 15 915 5 HOH HOH A . X 4 HOH 16 916 20 HOH HOH A . X 4 HOH 17 917 53 HOH HOH A . X 4 HOH 18 918 34 HOH HOH A . X 4 HOH 19 919 75 HOH HOH A . X 4 HOH 20 920 38 HOH HOH A . X 4 HOH 21 921 61 HOH HOH A . X 4 HOH 22 922 21 HOH HOH A . X 4 HOH 23 923 80 HOH HOH A . X 4 HOH 24 924 25 HOH HOH A . X 4 HOH 25 925 171 HOH HOH A . X 4 HOH 26 926 169 HOH HOH A . X 4 HOH 27 927 84 HOH HOH A . X 4 HOH 28 928 4 HOH HOH A . X 4 HOH 29 929 41 HOH HOH A . X 4 HOH 30 930 2 HOH HOH A . X 4 HOH 31 931 155 HOH HOH A . X 4 HOH 32 932 10 HOH HOH A . X 4 HOH 33 933 87 HOH HOH A . X 4 HOH 34 934 42 HOH HOH A . X 4 HOH 35 935 6 HOH HOH A . X 4 HOH 36 936 108 HOH HOH A . X 4 HOH 37 937 57 HOH HOH A . X 4 HOH 38 938 175 HOH HOH A . X 4 HOH 39 939 82 HOH HOH A . X 4 HOH 40 940 55 HOH HOH A . X 4 HOH 41 941 173 HOH HOH A . X 4 HOH 42 942 13 HOH HOH A . X 4 HOH 43 943 39 HOH HOH A . X 4 HOH 44 944 14 HOH HOH A . X 4 HOH 45 945 99 HOH HOH A . X 4 HOH 46 946 30 HOH HOH A . X 4 HOH 47 947 56 HOH HOH A . X 4 HOH 48 948 35 HOH HOH A . X 4 HOH 49 949 125 HOH HOH A . X 4 HOH 50 950 83 HOH HOH A . X 4 HOH 51 951 72 HOH HOH A . X 4 HOH 52 952 131 HOH HOH A . X 4 HOH 53 953 94 HOH HOH A . X 4 HOH 54 954 127 HOH HOH A . X 4 HOH 55 955 116 HOH HOH A . X 4 HOH 56 956 12 HOH HOH A . X 4 HOH 57 957 63 HOH HOH A . X 4 HOH 58 958 113 HOH HOH A . X 4 HOH 59 959 95 HOH HOH A . X 4 HOH 60 960 29 HOH HOH A . X 4 HOH 61 961 19 HOH HOH A . X 4 HOH 62 962 18 HOH HOH A . X 4 HOH 63 963 97 HOH HOH A . X 4 HOH 64 964 31 HOH HOH A . X 4 HOH 65 965 115 HOH HOH A . X 4 HOH 66 966 43 HOH HOH A . X 4 HOH 67 967 26 HOH HOH A . X 4 HOH 68 968 74 HOH HOH A . X 4 HOH 69 969 138 HOH HOH A . X 4 HOH 70 970 178 HOH HOH A . X 4 HOH 71 971 130 HOH HOH A . X 4 HOH 72 972 170 HOH HOH A . X 4 HOH 73 973 9 HOH HOH A . X 4 HOH 74 974 172 HOH HOH A . X 4 HOH 75 975 27 HOH HOH A . X 4 HOH 76 976 159 HOH HOH A . X 4 HOH 77 977 46 HOH HOH A . X 4 HOH 78 978 49 HOH HOH A . X 4 HOH 79 979 65 HOH HOH A . X 4 HOH 80 980 180 HOH HOH A . X 4 HOH 81 981 91 HOH HOH A . X 4 HOH 82 982 165 HOH HOH A . X 4 HOH 83 983 132 HOH HOH A . X 4 HOH 84 984 68 HOH HOH A . X 4 HOH 85 985 143 HOH HOH A . X 4 HOH 86 986 60 HOH HOH A . X 4 HOH 87 987 145 HOH HOH A . X 4 HOH 88 988 168 HOH HOH A . X 4 HOH 89 989 150 HOH HOH A . X 4 HOH 90 990 33 HOH HOH A . X 4 HOH 91 991 77 HOH HOH A . X 4 HOH 92 992 176 HOH HOH A . X 4 HOH 93 993 109 HOH HOH A . X 4 HOH 94 994 62 HOH HOH A . X 4 HOH 95 995 50 HOH HOH A . X 4 HOH 96 996 64 HOH HOH A . X 4 HOH 97 997 152 HOH HOH A . X 4 HOH 98 998 156 HOH HOH A . Y 4 HOH 1 901 122 HOH HOH B . Y 4 HOH 2 902 28 HOH HOH B . Y 4 HOH 3 903 137 HOH HOH B . Y 4 HOH 4 904 1 HOH HOH B . Y 4 HOH 5 905 92 HOH HOH B . Y 4 HOH 6 906 139 HOH HOH B . Y 4 HOH 7 907 11 HOH HOH B . Y 4 HOH 8 908 106 HOH HOH B . Y 4 HOH 9 909 58 HOH HOH B . Y 4 HOH 10 910 3 HOH HOH B . Y 4 HOH 11 911 89 HOH HOH B . Y 4 HOH 12 912 69 HOH HOH B . Y 4 HOH 13 913 90 HOH HOH B . Y 4 HOH 14 914 111 HOH HOH B . Y 4 HOH 15 915 70 HOH HOH B . Y 4 HOH 16 916 120 HOH HOH B . Y 4 HOH 17 917 119 HOH HOH B . Y 4 HOH 18 918 7 HOH HOH B . Y 4 HOH 19 919 104 HOH HOH B . Y 4 HOH 20 920 51 HOH HOH B . Y 4 HOH 21 921 66 HOH HOH B . Y 4 HOH 22 922 17 HOH HOH B . Y 4 HOH 23 923 79 HOH HOH B . Y 4 HOH 24 924 166 HOH HOH B . Y 4 HOH 25 925 147 HOH HOH B . Y 4 HOH 26 926 140 HOH HOH B . Y 4 HOH 27 927 24 HOH HOH B . Y 4 HOH 28 928 86 HOH HOH B . Y 4 HOH 29 929 134 HOH HOH B . Y 4 HOH 30 930 105 HOH HOH B . Y 4 HOH 31 931 37 HOH HOH B . Y 4 HOH 32 932 54 HOH HOH B . Y 4 HOH 33 933 67 HOH HOH B . Y 4 HOH 34 934 100 HOH HOH B . Y 4 HOH 35 935 71 HOH HOH B . Y 4 HOH 36 936 121 HOH HOH B . Y 4 HOH 37 937 110 HOH HOH B . Y 4 HOH 38 938 118 HOH HOH B . Y 4 HOH 39 939 102 HOH HOH B . Y 4 HOH 40 940 85 HOH HOH B . Y 4 HOH 41 941 142 HOH HOH B . Y 4 HOH 42 942 45 HOH HOH B . Y 4 HOH 43 943 48 HOH HOH B . Y 4 HOH 44 944 59 HOH HOH B . Y 4 HOH 45 945 162 HOH HOH B . Y 4 HOH 46 946 114 HOH HOH B . Y 4 HOH 47 947 117 HOH HOH B . Y 4 HOH 48 948 126 HOH HOH B . Y 4 HOH 49 949 103 HOH HOH B . Y 4 HOH 50 950 163 HOH HOH B . Y 4 HOH 51 951 161 HOH HOH B . Y 4 HOH 52 952 123 HOH HOH B . Y 4 HOH 53 953 153 HOH HOH B . Y 4 HOH 54 954 76 HOH HOH B . Y 4 HOH 55 955 78 HOH HOH B . Y 4 HOH 56 956 158 HOH HOH B . Y 4 HOH 57 957 98 HOH HOH B . Y 4 HOH 58 958 179 HOH HOH B . Y 4 HOH 59 959 44 HOH HOH B . Y 4 HOH 60 960 47 HOH HOH B . Y 4 HOH 61 961 128 HOH HOH B . Y 4 HOH 62 962 15 HOH HOH B . Y 4 HOH 63 963 167 HOH HOH B . Y 4 HOH 64 964 107 HOH HOH B . Y 4 HOH 65 965 154 HOH HOH B . Y 4 HOH 66 966 149 HOH HOH B . Y 4 HOH 67 967 93 HOH HOH B . Y 4 HOH 68 968 88 HOH HOH B . Y 4 HOH 69 969 177 HOH HOH B . Y 4 HOH 70 970 144 HOH HOH B . Y 4 HOH 71 971 174 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 720 ? CG ? A ASP 72 CG 2 1 Y 1 A ASP 720 ? OD1 ? A ASP 72 OD1 3 1 Y 1 A ASP 720 ? OD2 ? A ASP 72 OD2 4 1 Y 1 A ASN 721 ? CG ? A ASN 73 CG 5 1 Y 1 A ASN 721 ? OD1 ? A ASN 73 OD1 6 1 Y 1 A ASN 721 ? ND2 ? A ASN 73 ND2 7 1 Y 1 B ARG 664 ? CG ? B ARG 16 CG 8 1 Y 1 B ARG 664 ? CD ? B ARG 16 CD 9 1 Y 1 B ARG 664 ? NE ? B ARG 16 NE 10 1 Y 1 B ARG 664 ? CZ ? B ARG 16 CZ 11 1 Y 1 B ARG 664 ? NH1 ? B ARG 16 NH1 12 1 Y 1 B ARG 664 ? NH2 ? B ARG 16 NH2 13 1 Y 1 B ASN 721 ? CG ? B ASN 73 CG 14 1 Y 1 B ASN 721 ? OD1 ? B ASN 73 OD1 15 1 Y 1 B ASN 721 ? ND2 ? B ASN 73 ND2 16 1 Y 1 B ARG 736 ? CG ? B ARG 88 CG 17 1 Y 1 B ARG 736 ? CD ? B ARG 88 CD 18 1 Y 1 B ARG 736 ? NE ? B ARG 88 NE 19 1 Y 1 B ARG 736 ? CZ ? B ARG 88 CZ 20 1 Y 1 B ARG 736 ? NH1 ? B ARG 88 NH1 21 1 Y 1 B ARG 736 ? NH2 ? B ARG 88 NH2 22 1 Y 1 B GLU 744 ? CG ? B GLU 96 CG 23 1 Y 1 B GLU 744 ? CD ? B GLU 96 CD 24 1 Y 1 B GLU 744 ? OE1 ? B GLU 96 OE1 25 1 Y 1 B GLU 744 ? OE2 ? B GLU 96 OE2 26 1 Y 1 B SER 757 ? OG ? B SER 109 OG 27 1 Y 1 B ASP 758 ? CG ? B ASP 110 CG 28 1 Y 1 B ASP 758 ? OD1 ? B ASP 110 OD1 29 1 Y 1 B ASP 758 ? OD2 ? B ASP 110 OD2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? 1.0.5 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.9.6 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8CKK _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.894 _cell.length_a_esd ? _cell.length_b 68.347 _cell.length_b_esd ? _cell.length_c 85.502 _cell.length_c_esd ? _cell.volume 303258.427 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8CKK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8CKK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M BIS-TRIS propane, 6 M ammonium nitrate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-01-26 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator M _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9686 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9686 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 22.67 _reflns.entry_id 8CKK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.557 _reflns.d_resolution_low 53.39 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24530 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 55.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.128 _reflns.pdbx_Rpim_I_all 0.036 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.123 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.557 _reflns_shell.d_res_low 1.768 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1226 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 12.2 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.633 _reflns_shell.pdbx_Rpim_I_all 0.465 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.624 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 8.9 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.564 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 35.52 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8CKK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.56 _refine.ls_d_res_low 42.75 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24526 _refine.ls_number_reflns_R_free 1194 _refine.ls_number_reflns_R_work 23334 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 55.80 _refine.ls_percent_reflns_R_free 4.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1981 _refine.ls_R_factor_R_free 0.2292 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1966 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.5736 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1976 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.56 _refine_hist.d_res_low 42.75 _refine_hist.number_atoms_solvent 169 _refine_hist.number_atoms_total 2089 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1808 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 112 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0024 ? 1967 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6292 ? 2660 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0412 ? 271 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0043 ? 356 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 10.2727 ? 711 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.56 1.62 . . 7 144 3.11 . . . . 0.3437 . . . . . . . . . . . 0.5894 'X-RAY DIFFRACTION' 1.62 1.69 . . 20 365 8.00 . . . . 0.3228 . . . . . . . . . . . 0.3836 'X-RAY DIFFRACTION' 1.69 1.78 . . 47 814 17.68 . . . . 0.2842 . . . . . . . . . . . 0.3124 'X-RAY DIFFRACTION' 1.78 1.89 . . 73 1406 30.37 . . . . 0.2585 . . . . . . . . . . . 0.2668 'X-RAY DIFFRACTION' 1.89 2.04 . . 111 2427 51.79 . . . . 0.2388 . . . . . . . . . . . 0.2583 'X-RAY DIFFRACTION' 2.04 2.25 . . 209 3897 84.14 . . . . 0.2269 . . . . . . . . . . . 0.2763 'X-RAY DIFFRACTION' 2.25 2.57 . . 216 4639 98.60 . . . . 0.2275 . . . . . . . . . . . 0.2709 'X-RAY DIFFRACTION' 2.57 3.24 . . 261 4717 99.94 . . . . 0.2023 . . . . . . . . . . . 0.2428 'X-RAY DIFFRACTION' 3.24 42.75 . . 250 4925 99.94 . . . . 0.1669 . . . . . . . . . . . 0.1914 # _struct.entry_id 8CKK _struct.title 'Semaphorin-5A TSR 3-4 domains in complex with nitrate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8CKK _struct_keywords.text 'semaphorin, cell signalling, axon guidance cue, glycosaminoglycan binding protein, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 2 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 3 ? T N N 3 ? U N N 3 ? V N N 2 ? W N N 2 ? X N N 4 ? Y N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SEM5A_HUMAN _struct_ref.pdbx_db_accession Q13591 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PHMFWTGWGPWERCTAQCGGGIQARRRICENGPDCAGCNVEYQSCNTNPCPELKKTTPWTPWTPVNISDNGGHYEQRFRY TCKARLADPNLLEVGRQRIEMRYCSSDGTSGCST ; _struct_ref.pdbx_align_begin 652 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8CKK A 4 ? 117 ? Q13591 652 ? 765 ? 652 765 2 1 8CKK B 4 ? 117 ? Q13591 652 ? 765 ? 652 765 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8CKK GLU A 1 ? UNP Q13591 ? ? 'expression tag' 649 1 1 8CKK THR A 2 ? UNP Q13591 ? ? 'expression tag' 650 2 1 8CKK GLY A 3 ? UNP Q13591 ? ? 'expression tag' 651 3 1 8CKK GLY A 118 ? UNP Q13591 ? ? 'expression tag' 766 4 1 8CKK THR A 119 ? UNP Q13591 ? ? 'expression tag' 767 5 1 8CKK LEU A 120 ? UNP Q13591 ? ? 'expression tag' 768 6 1 8CKK GLU A 121 ? UNP Q13591 ? ? 'expression tag' 769 7 1 8CKK VAL A 122 ? UNP Q13591 ? ? 'expression tag' 770 8 1 8CKK LEU A 123 ? UNP Q13591 ? ? 'expression tag' 771 9 1 8CKK PHE A 124 ? UNP Q13591 ? ? 'expression tag' 772 10 1 8CKK GLN A 125 ? UNP Q13591 ? ? 'expression tag' 773 11 2 8CKK GLU B 1 ? UNP Q13591 ? ? 'expression tag' 649 12 2 8CKK THR B 2 ? UNP Q13591 ? ? 'expression tag' 650 13 2 8CKK GLY B 3 ? UNP Q13591 ? ? 'expression tag' 651 14 2 8CKK GLY B 118 ? UNP Q13591 ? ? 'expression tag' 766 15 2 8CKK THR B 119 ? UNP Q13591 ? ? 'expression tag' 767 16 2 8CKK LEU B 120 ? UNP Q13591 ? ? 'expression tag' 768 17 2 8CKK GLU B 121 ? UNP Q13591 ? ? 'expression tag' 769 18 2 8CKK VAL B 122 ? UNP Q13591 ? ? 'expression tag' 770 19 2 8CKK LEU B 123 ? UNP Q13591 ? ? 'expression tag' 771 20 2 8CKK PHE B 124 ? UNP Q13591 ? ? 'expression tag' 772 21 2 8CKK GLN B 125 ? UNP Q13591 ? ? 'expression tag' 773 22 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ;S-SAD was used for phasing this crystal structure, providing experimental evidence for the position of sulfur atoms of Cys and Met residues. ; # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 91 ? ASN A 93 ? ASP A 739 ASN A 741 5 ? 3 HELX_P HELX_P2 AA2 ASP B 91 ? ASN B 93 ? ASP B 739 ASN B 741 5 ? 3 HELX_P HELX_P3 AA3 GLY B 118 ? PHE B 124 ? GLY B 766 PHE B 772 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 17 SG ? ? ? 1_555 A CYS 48 SG ? ? A CYS 665 A CYS 696 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 21 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 669 A CYS 701 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf3 disulf ? ? A CYS 32 SG ? ? ? 1_555 A CYS 38 SG ? ? A CYS 680 A CYS 686 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? A CYS 41 SG ? ? ? 1_555 B CYS 41 SG ? ? A CYS 689 B CYS 689 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf5 disulf ? ? A CYS 85 SG ? ? ? 1_555 B CYS 85 SG ? ? A CYS 733 B CYS 733 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf6 disulf ? ? A CYS 107 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 755 A CYS 763 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf7 disulf ? ? B CYS 17 SG ? ? ? 1_555 B CYS 48 SG ? ? B CYS 665 B CYS 696 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf8 disulf ? ? B CYS 21 SG ? ? ? 1_555 B CYS 53 SG ? ? B CYS 669 B CYS 701 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf9 disulf ? ? B CYS 32 SG ? ? ? 1_555 B CYS 38 SG ? ? B CYS 680 B CYS 686 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf10 disulf ? ? B CYS 107 SG ? ? ? 1_555 B CYS 115 SG ? ? B CYS 755 B CYS 763 1_555 ? ? ? ? ? ? ? 2.023 ? ? covale1 covale one ? A TRP 8 CD1 ? ? ? 1_555 C MAN . C1 ? ? A TRP 656 A MAN 801 1_555 ? ? ? ? ? ? ? 1.492 ? C-Mannosylation covale2 covale one ? A TRP 11 CD1 ? ? ? 1_555 M MAN . C1 ? ? A TRP 659 A MAN 811 1_555 ? ? ? ? ? ? ? 1.492 ? C-Mannosylation covale3 covale one ? B TRP 8 CD1 ? ? ? 1_555 W MAN . C1 ? ? B TRP 656 B MAN 810 1_555 ? ? ? ? ? ? ? 1.491 ? C-Mannosylation covale4 covale one ? B TRP 11 CD1 ? ? ? 1_555 V MAN . C1 ? ? B TRP 659 B MAN 809 1_555 ? ? ? ? ? ? ? 1.491 ? C-Mannosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 35 A . ? GLY 683 A PRO 36 A ? PRO 684 A 1 -0.51 2 GLY 35 B . ? GLY 683 B PRO 36 B ? PRO 684 B 1 12.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 3 ? AA5 ? 3 ? AA6 ? 3 ? AA7 ? 2 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 7 ? TRP A 8 ? PHE A 655 TRP A 656 AA1 2 CYS A 32 ? GLU A 33 ? CYS A 680 GLU A 681 AA2 1 GLY A 24 ? ARG A 29 ? GLY A 672 ARG A 677 AA2 2 VAL A 43 ? CYS A 48 ? VAL A 691 CYS A 696 AA3 1 GLU A 55 ? THR A 59 ? GLU A 703 THR A 707 AA3 2 THR A 84 ? ARG A 88 ? THR A 732 ARG A 736 AA3 3 LEU B 95 ? VAL B 97 ? LEU B 743 VAL B 745 AA4 1 THR A 66 ? PRO A 67 ? THR A 714 PRO A 715 AA4 2 HIS A 76 ? ARG A 82 ? HIS A 724 ARG A 730 AA4 3 ARG B 101 ? CYS B 107 ? ARG B 749 CYS B 755 AA5 1 LEU A 95 ? VAL A 97 ? LEU A 743 VAL A 745 AA5 2 THR B 84 ? ARG B 88 ? THR B 732 ARG B 736 AA5 3 GLU B 55 ? THR B 59 ? GLU B 703 THR B 707 AA6 1 ARG A 101 ? CYS A 107 ? ARG A 749 CYS A 755 AA6 2 HIS B 76 ? ARG B 82 ? HIS B 724 ARG B 730 AA6 3 THR B 66 ? PRO B 67 ? THR B 714 PRO B 715 AA7 1 PHE B 7 ? TRP B 8 ? PHE B 655 TRP B 656 AA7 2 CYS B 32 ? GLU B 33 ? CYS B 680 GLU B 681 AA8 1 GLY B 24 ? ARG B 29 ? GLY B 672 ARG B 677 AA8 2 VAL B 43 ? CYS B 48 ? VAL B 691 CYS B 696 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 7 ? N PHE A 655 O GLU A 33 ? O GLU A 681 AA2 1 2 N GLY A 24 ? N GLY A 672 O CYS A 48 ? O CYS A 696 AA3 1 2 N LYS A 58 ? N LYS A 706 O CYS A 85 ? O CYS A 733 AA3 2 3 N LYS A 86 ? N LYS A 734 O GLU B 96 ? O GLU B 744 AA4 1 2 N THR A 66 ? N THR A 714 O GLN A 79 ? O GLN A 727 AA4 2 3 N HIS A 76 ? N HIS A 724 O CYS B 107 ? O CYS B 755 AA5 1 2 N GLU A 96 ? N GLU A 744 O LYS B 86 ? O LYS B 734 AA5 2 3 O CYS B 85 ? O CYS B 733 N LYS B 58 ? N LYS B 706 AA6 1 2 N ARG A 101 ? N ARG A 749 O ARG B 82 ? O ARG B 730 AA6 2 3 O GLN B 79 ? O GLN B 727 N THR B 66 ? N THR B 714 AA7 1 2 N PHE B 7 ? N PHE B 655 O GLU B 33 ? O GLU B 681 AA8 1 2 N GLN B 26 ? N GLN B 674 O GLN B 46 ? O GLN B 694 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 685 ? ? -100.94 52.87 2 1 ASP B 685 ? ? -108.73 67.16 3 1 ASP B 758 ? ? -98.53 56.71 4 1 THR B 765 ? ? -144.13 -61.26 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 3.68562627109 36.5972282098 65.1143625678 0.235665185474 ? -0.0370732885249 ? -0.0652595416356 ? 0.134741354135 ? -0.00335246354071 ? 0.142570347344 ? 1.22424270158 ? -1.05090152901 ? 0.0921339207231 ? 4.07098284168 ? -2.85504779782 ? 2.91319650022 ? 0.0331956010305 ? 0.093390171663 ? 0.0765465174073 ? -0.416269270521 ? 0.112896895847 ? 0.149394626427 ? 0.17844383198 ? -0.045149911832 ? -0.0625126059008 ? 2 'X-RAY DIFFRACTION' ? refined 4.90535625272 25.258633504 70.5963818389 0.248621026678 ? -0.0475034344409 ? -0.0988847011494 ? 0.181188963068 ? 0.0307306579304 ? 0.117970047189 ? 0.152437714836 ? 0.478111246127 ? -0.564247247201 ? 9.22172796697 ? -2.18548707423 ? 0.163790041609 ? 0.0352989513255 ? -0.00345928162741 ? 0.0296528710519 ? 0.148708012546 ? -0.0483493514109 ? 0.116849501523 ? -0.0885840475743 ? 0.0445018144967 ? 0.0105608025703 ? 3 'X-RAY DIFFRACTION' ? refined 2.54725456995 -25.5342887523 88.3111959387 0.352669602016 ? -0.00749881084789 ? 0.118670185285 ? 0.408721575514 ? 0.303683714063 ? 0.512694930383 ? 0.997070949596 ? 2.15689832839 ? -0.327595702468 ? 5.13373290601 ? 1.30154374858 ? 7.60262002103 ? -0.213258973314 ? -1.76498869892 ? -1.24973831333 ? 0.910653215753 ? -0.128271167908 ? -0.344318447057 ? 1.43877755615 ? -0.0426228751792 ? 0.232979733327 ? 4 'X-RAY DIFFRACTION' ? refined 1.81145903367 -4.87117173746 80.1467627901 0.123423021888 ? 0.0163619602896 ? 0.00345241108779 ? 0.15359789291 ? 0.0202583276547 ? 0.129414597805 ? 1.31982343115 ? 2.14968087652 ? -0.717004279217 ? 7.05528736577 ? -3.24685584658 ? 2.67960128292 ? -0.0702107970945 ? -0.0344329767277 ? -0.176856916618 ? -0.0392033822253 ? -0.147057215018 ? -0.345904474711 ? -0.179334275326 ? -0.0290496301492 ? 0.18713778684 ? 5 'X-RAY DIFFRACTION' ? refined 15.7780738575 -15.1873274291 87.2987747357 0.121377766638 ? -0.0365805976679 ? -0.052743313814 ? 0.214532458517 ? 0.0720960565687 ? 0.213351398399 ? 4.48151554313 ? -3.23078274195 ? 1.31236897676 ? 7.01281589347 ? -0.664053910716 ? 2.05173210353 ? 0.127269682085 ? -0.418283101801 ? -0.235455211197 ? 0.27690610373 ? -0.151518883592 ? -0.356485858115 ? 0.451481514054 ? 0.277518931071 ? 0.109933943194 ? 6 'X-RAY DIFFRACTION' ? refined 18.4447516763 39.2225158552 75.541011002 0.213285405547 ? 0.00814650835828 ? -0.0970199367095 ? 0.164935322344 ? -0.0238535842458 ? 0.24873591623 ? 1.93345458835 ? 1.6317185107 ? -0.626425249966 ? 8.78386162515 ? 0.109802405767 ? 1.71669651527 ? -0.0139020920938 ? -0.0114885396765 ? -0.164187428538 ? 0.58904251806 ? 0.253076303403 ? -0.864054159938 ? 0.174143140569 ? 0.0830009952327 ? -0.178461426647 ? 7 'X-RAY DIFFRACTION' ? refined 15.9087304897 45.8169067342 72.8133289114 0.214245906555 ? -0.0245833365186 ? -0.0688416427705 ? 0.216677784901 ? 0.0144210829954 ? 0.264227994386 ? 0.268992919051 ? 0.593263802647 ? -0.361621516737 ? 3.49595753651 ? 0.301331438481 ? 1.21550755244 ? -0.0306102918838 ? 0.115238847836 ? -0.0378594690995 ? -0.319620363763 ? 0.109666819414 ? 0.173244303276 ? 0.0532399260401 ? -0.121126123026 ? -0.0419612923319 ? 8 'X-RAY DIFFRACTION' ? refined 13.6068474803 4.88899976172 81.0182859902 0.218617430874 ? 0.017621578006 ? -0.0209925680004 ? 0.164097366705 ? 0.0217069815556 ? 0.289478292758 ? 1.32278281362 ? -0.0657897281079 ? -0.568794346364 ? 3.48892832946 ? -0.73738516662 ? 1.650651723 ? -0.229720842348 ? -0.202944844667 ? 0.335369340571 ? -0.554224619083 ? 0.262425057526 ? -0.53077253905 ? -0.110765442945 ? -0.0698747570854 ? -0.0157375093558 ? 9 'X-RAY DIFFRACTION' ? refined 10.5378491203 -25.8037023739 89.2501843388 0.584221792809 ? 0.0208734972314 ? -0.110073065924 ? 0.391532161782 ? 0.219153821383 ? 0.584960720939 ? 6.36106624823 ? 0.220628868989 ? -0.181614424984 ? 0.0518365635357 ? -0.516418826975 ? 6.05051921757 ? 0.179957470374 ? 0.524977021034 ? -1.40453925153 ? -0.335880901787 ? -0.0516938087681 ? -0.0507855648903 ? 1.97303821125 ? -0.37368395108 ? 0.158012682293 ? 10 'X-RAY DIFFRACTION' ? refined 11.4027344522 -4.6562754058 83.9920476539 0.161183319026 ? -0.00975520151845 ? -0.0174079392359 ? 0.178011798491 ? 0.0585371986568 ? 0.214333690067 ? 1.59106562068 ? -0.870362570206 ? 0.588510824417 ? 3.03757197229 ? -0.515970311075 ? 1.57718523116 ? -0.0693234047747 ? -0.181739684823 ? 0.105037545572 ? 0.223763120282 ? 0.0554234559236 ? -0.275656622186 ? -0.284190651747 ? -0.0534448702616 ? 0.0446387588374 ? 11 'X-RAY DIFFRACTION' ? refined -0.574428294274 -5.48791292437 85.0886444837 0.193973665742 ? 0.0398100837376 ? 0.10334254222 ? 0.19152089587 ? 0.0378346511812 ? 0.223266074526 ? 2.24122032794 ? 1.90688236246 ? 0.679714756106 ? 3.05824830763 ? 0.0669864331964 ? 0.688535772764 ? 0.127472885516 ? -0.141628368274 ? 0.321559130448 ? 0.654003565046 ? -0.0772064415657 ? 0.530012503254 ? -0.178175393659 ? -0.0226714754833 ? -0.0255630778619 ? 12 'X-RAY DIFFRACTION' ? refined 0.551886833863 -31.4382557201 81.0865144187 0.471923396021 ? 0.0244482425368 ? -0.0914213670362 ? 0.300598293443 ? -0.0648617420844 ? 0.21691733821 ? 3.51821287127 ? -1.26743764169 ? -2.35053156587 ? 8.64039361832 ? 1.0924058333 ? 1.7374651796 ? 0.140886435643 ? 0.325905973044 ? -0.374510952555 ? -0.578677115316 ? 0.0813576476858 ? 0.933666413527 ? 1.06855829697 ? 0.0236188798731 ? -0.145098976436 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 651 ? A 27 A 677 ? ? ;chain 'A' and (resid 651 through 677 ) ; 2 'X-RAY DIFFRACTION' 2 A 28 A 678 ? A 62 A 712 ? ? ;chain 'A' and (resid 678 through 712 ) ; 3 'X-RAY DIFFRACTION' 3 A 63 A 713 ? A 72 A 722 ? ? ;chain 'A' and (resid 713 through 722 ) ; 4 'X-RAY DIFFRACTION' 4 A 73 A 723 ? A 92 A 742 ? ? ;chain 'A' and (resid 723 through 742 ) ; 5 'X-RAY DIFFRACTION' 5 A 93 A 743 ? A 113 A 763 ? ? ;chain 'A' and (resid 743 through 763 ) ; 6 'X-RAY DIFFRACTION' 6 B 1 B 652 ? B 26 B 677 ? ? ;chain 'B' and (resid 652 through 677 ) ; 7 'X-RAY DIFFRACTION' 7 B 27 B 678 ? B 45 B 696 ? ? ;chain 'B' and (resid 678 through 696 ) ; 8 'X-RAY DIFFRACTION' 8 B 46 B 697 ? B 61 B 712 ? ? ;chain 'B' and (resid 697 through 712 ) ; 9 'X-RAY DIFFRACTION' 9 B 62 B 713 ? B 71 B 722 ? ? ;chain 'B' and (resid 713 through 722 ) ; 10 'X-RAY DIFFRACTION' 10 B 72 B 723 ? B 91 B 742 ? ? ;chain 'B' and (resid 723 through 742 ) ; 11 'X-RAY DIFFRACTION' 11 B 92 B 743 ? B 101 B 752 ? ? ;chain 'B' and (resid 743 through 752 ) ; 12 'X-RAY DIFFRACTION' 12 B 102 B 753 ? B 121 B 772 ? ? ;chain 'B' and (resid 753 through 772 ) ; # _pdbx_entry_details.entry_id 8CKK _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 649 ? A GLU 1 2 1 Y 1 A THR 650 ? A THR 2 3 1 Y 1 A SER 764 ? A SER 116 4 1 Y 1 A THR 765 ? A THR 117 5 1 Y 1 A GLY 766 ? A GLY 118 6 1 Y 1 A THR 767 ? A THR 119 7 1 Y 1 A LEU 768 ? A LEU 120 8 1 Y 1 A GLU 769 ? A GLU 121 9 1 Y 1 A VAL 770 ? A VAL 122 10 1 Y 1 A LEU 771 ? A LEU 123 11 1 Y 1 A PHE 772 ? A PHE 124 12 1 Y 1 A GLN 773 ? A GLN 125 13 1 Y 1 B GLU 649 ? B GLU 1 14 1 Y 1 B THR 650 ? B THR 2 15 1 Y 1 B GLY 651 ? B GLY 3 16 1 Y 1 B GLN 773 ? B GLN 125 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MAN C1 C N S 230 MAN C2 C N S 231 MAN C3 C N S 232 MAN C4 C N S 233 MAN C5 C N R 234 MAN C6 C N N 235 MAN O1 O N N 236 MAN O2 O N N 237 MAN O3 O N N 238 MAN O4 O N N 239 MAN O5 O N N 240 MAN O6 O N N 241 MAN H1 H N N 242 MAN H2 H N N 243 MAN H3 H N N 244 MAN H4 H N N 245 MAN H5 H N N 246 MAN H61 H N N 247 MAN H62 H N N 248 MAN HO1 H N N 249 MAN HO2 H N N 250 MAN HO3 H N N 251 MAN HO4 H N N 252 MAN HO6 H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 NO3 N N N N 274 NO3 O1 O N N 275 NO3 O2 O N N 276 NO3 O3 O N N 277 PHE N N N N 278 PHE CA C N S 279 PHE C C N N 280 PHE O O N N 281 PHE CB C N N 282 PHE CG C Y N 283 PHE CD1 C Y N 284 PHE CD2 C Y N 285 PHE CE1 C Y N 286 PHE CE2 C Y N 287 PHE CZ C Y N 288 PHE OXT O N N 289 PHE H H N N 290 PHE H2 H N N 291 PHE HA H N N 292 PHE HB2 H N N 293 PHE HB3 H N N 294 PHE HD1 H N N 295 PHE HD2 H N N 296 PHE HE1 H N N 297 PHE HE2 H N N 298 PHE HZ H N N 299 PHE HXT H N N 300 PRO N N N N 301 PRO CA C N S 302 PRO C C N N 303 PRO O O N N 304 PRO CB C N N 305 PRO CG C N N 306 PRO CD C N N 307 PRO OXT O N N 308 PRO H H N N 309 PRO HA H N N 310 PRO HB2 H N N 311 PRO HB3 H N N 312 PRO HG2 H N N 313 PRO HG3 H N N 314 PRO HD2 H N N 315 PRO HD3 H N N 316 PRO HXT H N N 317 SER N N N N 318 SER CA C N S 319 SER C C N N 320 SER O O N N 321 SER CB C N N 322 SER OG O N N 323 SER OXT O N N 324 SER H H N N 325 SER H2 H N N 326 SER HA H N N 327 SER HB2 H N N 328 SER HB3 H N N 329 SER HG H N N 330 SER HXT H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TRP N N N N 349 TRP CA C N S 350 TRP C C N N 351 TRP O O N N 352 TRP CB C N N 353 TRP CG C Y N 354 TRP CD1 C Y N 355 TRP CD2 C Y N 356 TRP NE1 N Y N 357 TRP CE2 C Y N 358 TRP CE3 C Y N 359 TRP CZ2 C Y N 360 TRP CZ3 C Y N 361 TRP CH2 C Y N 362 TRP OXT O N N 363 TRP H H N N 364 TRP H2 H N N 365 TRP HA H N N 366 TRP HB2 H N N 367 TRP HB3 H N N 368 TRP HD1 H N N 369 TRP HE1 H N N 370 TRP HE3 H N N 371 TRP HZ2 H N N 372 TRP HZ3 H N N 373 TRP HH2 H N N 374 TRP HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MAN C1 C2 sing N N 218 MAN C1 O1 sing N N 219 MAN C1 O5 sing N N 220 MAN C1 H1 sing N N 221 MAN C2 C3 sing N N 222 MAN C2 O2 sing N N 223 MAN C2 H2 sing N N 224 MAN C3 C4 sing N N 225 MAN C3 O3 sing N N 226 MAN C3 H3 sing N N 227 MAN C4 C5 sing N N 228 MAN C4 O4 sing N N 229 MAN C4 H4 sing N N 230 MAN C5 C6 sing N N 231 MAN C5 O5 sing N N 232 MAN C5 H5 sing N N 233 MAN C6 O6 sing N N 234 MAN C6 H61 sing N N 235 MAN C6 H62 sing N N 236 MAN O1 HO1 sing N N 237 MAN O2 HO2 sing N N 238 MAN O3 HO3 sing N N 239 MAN O4 HO4 sing N N 240 MAN O6 HO6 sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 NO3 N O1 doub N N 261 NO3 N O2 sing N N 262 NO3 N O3 sing N N 263 PHE N CA sing N N 264 PHE N H sing N N 265 PHE N H2 sing N N 266 PHE CA C sing N N 267 PHE CA CB sing N N 268 PHE CA HA sing N N 269 PHE C O doub N N 270 PHE C OXT sing N N 271 PHE CB CG sing N N 272 PHE CB HB2 sing N N 273 PHE CB HB3 sing N N 274 PHE CG CD1 doub Y N 275 PHE CG CD2 sing Y N 276 PHE CD1 CE1 sing Y N 277 PHE CD1 HD1 sing N N 278 PHE CD2 CE2 doub Y N 279 PHE CD2 HD2 sing N N 280 PHE CE1 CZ doub Y N 281 PHE CE1 HE1 sing N N 282 PHE CE2 CZ sing Y N 283 PHE CE2 HE2 sing N N 284 PHE CZ HZ sing N N 285 PHE OXT HXT sing N N 286 PRO N CA sing N N 287 PRO N CD sing N N 288 PRO N H sing N N 289 PRO CA C sing N N 290 PRO CA CB sing N N 291 PRO CA HA sing N N 292 PRO C O doub N N 293 PRO C OXT sing N N 294 PRO CB CG sing N N 295 PRO CB HB2 sing N N 296 PRO CB HB3 sing N N 297 PRO CG CD sing N N 298 PRO CG HG2 sing N N 299 PRO CG HG3 sing N N 300 PRO CD HD2 sing N N 301 PRO CD HD3 sing N N 302 PRO OXT HXT sing N N 303 SER N CA sing N N 304 SER N H sing N N 305 SER N H2 sing N N 306 SER CA C sing N N 307 SER CA CB sing N N 308 SER CA HA sing N N 309 SER C O doub N N 310 SER C OXT sing N N 311 SER CB OG sing N N 312 SER CB HB2 sing N N 313 SER CB HB3 sing N N 314 SER OG HG sing N N 315 SER OXT HXT sing N N 316 THR N CA sing N N 317 THR N H sing N N 318 THR N H2 sing N N 319 THR CA C sing N N 320 THR CA CB sing N N 321 THR CA HA sing N N 322 THR C O doub N N 323 THR C OXT sing N N 324 THR CB OG1 sing N N 325 THR CB CG2 sing N N 326 THR CB HB sing N N 327 THR OG1 HG1 sing N N 328 THR CG2 HG21 sing N N 329 THR CG2 HG22 sing N N 330 THR CG2 HG23 sing N N 331 THR OXT HXT sing N N 332 TRP N CA sing N N 333 TRP N H sing N N 334 TRP N H2 sing N N 335 TRP CA C sing N N 336 TRP CA CB sing N N 337 TRP CA HA sing N N 338 TRP C O doub N N 339 TRP C OXT sing N N 340 TRP CB CG sing N N 341 TRP CB HB2 sing N N 342 TRP CB HB3 sing N N 343 TRP CG CD1 doub Y N 344 TRP CG CD2 sing Y N 345 TRP CD1 NE1 sing Y N 346 TRP CD1 HD1 sing N N 347 TRP CD2 CE2 doub Y N 348 TRP CD2 CE3 sing Y N 349 TRP NE1 CE2 sing Y N 350 TRP NE1 HE1 sing N N 351 TRP CE2 CZ2 sing Y N 352 TRP CE3 CZ3 doub Y N 353 TRP CE3 HE3 sing N N 354 TRP CZ2 CH2 doub Y N 355 TRP CZ2 HZ2 sing N N 356 TRP CZ3 CH2 sing Y N 357 TRP CZ3 HZ3 sing N N 358 TRP CH2 HH2 sing N N 359 TRP OXT HXT sing N N 360 TYR N CA sing N N 361 TYR N H sing N N 362 TYR N H2 sing N N 363 TYR CA C sing N N 364 TYR CA CB sing N N 365 TYR CA HA sing N N 366 TYR C O doub N N 367 TYR C OXT sing N N 368 TYR CB CG sing N N 369 TYR CB HB2 sing N N 370 TYR CB HB3 sing N N 371 TYR CG CD1 doub Y N 372 TYR CG CD2 sing Y N 373 TYR CD1 CE1 sing Y N 374 TYR CD1 HD1 sing N N 375 TYR CD2 CE2 doub Y N 376 TYR CD2 HD2 sing N N 377 TYR CE1 CZ doub Y N 378 TYR CE1 HE1 sing N N 379 TYR CE2 CZ sing Y N 380 TYR CE2 HE2 sing N N 381 TYR CZ OH sing N N 382 TYR OH HH sing N N 383 TYR OXT HXT sing N N 384 VAL N CA sing N N 385 VAL N H sing N N 386 VAL N H2 sing N N 387 VAL CA C sing N N 388 VAL CA CB sing N N 389 VAL CA HA sing N N 390 VAL C O doub N N 391 VAL C OXT sing N N 392 VAL CB CG1 sing N N 393 VAL CB CG2 sing N N 394 VAL CB HB sing N N 395 VAL CG1 HG11 sing N N 396 VAL CG1 HG12 sing N N 397 VAL CG1 HG13 sing N N 398 VAL CG2 HG21 sing N N 399 VAL CG2 HG22 sing N N 400 VAL CG2 HG23 sing N N 401 VAL OXT HXT sing N N 402 # _pdbx_audit_support.funding_organization 'Medical Research Council (MRC, United Kingdom)' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number MR/T000503/1 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id MAN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id MAN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8CKG _pdbx_initial_refinement_model.details 'D_1292128352, same protein complexed with sulfate' # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 8CKK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.019270 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014631 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011696 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? ? ? ? ? ? ? ? ? ? ? ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_