HEADER TRANSFERASE 22-FEB-23 8CND TITLE CRYSTAL STRUCTURE OF CREBBP-Y1482N HISTONE ACETYLTRANSFERASE DOMAIN IN TITLE 2 COMPLEX WITH A BISUBSTRATE INHIBITOR, LYS-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.1.48; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CREBBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HISTONE ACETYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.E.MECHALY,W.ZHANG,A.HAOUZ,M.GREEN,F.RODRIGUES-LIMA REVDAT 1 06-MAR-24 8CND 0 JRNL AUTH A.E.MECHALY,W.ZHANG,A.HAOUZ,M.GREEN,F.RODRIGUES-LIMA JRNL TITL CRYSTAL STRUCTURE OF CREBBP-Y1482N HISTONE ACETYLTRANSFERASE JRNL TITL 2 DOMAIN IN COMPLEX WITH A BISUBSTRATE INHIBITOR, LYS-COA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (8-JUN-2022) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 77.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 21096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.280 REMARK 3 R VALUE (WORKING SET) : 0.278 REMARK 3 FREE R VALUE : 0.326 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1025 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.99 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.61 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3602 REMARK 3 BIN FREE R VALUE : 0.4303 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 16 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4426 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 33.36930 REMARK 3 B22 (A**2) : -53.97580 REMARK 3 B33 (A**2) : 20.60660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.570 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.930 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.435 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.987 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.445 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.842 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.835 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4617 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6245 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1633 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 780 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4617 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 565 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3539 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.90 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.67 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.19 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CND COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1292128831. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.972 REMARK 200 RESOLUTION RANGE LOW (A) : 77.459 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.14600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.09800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0,2 M POTASSIUM CITRATE TRIBASIC REMARK 280 MONOHYDRATE 20 % W/V POLYETHYLENE GLYCOL 3,350 PH 8,2, PH 8.2, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 43.40500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.59750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.45900 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 43.40500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.59750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 77.45900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 43.40500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.59750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.45900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 43.40500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.59750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.45900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 1054 REMARK 465 HIS A 1055 REMARK 465 HIS A 1056 REMARK 465 HIS A 1057 REMARK 465 HIS A 1058 REMARK 465 HIS A 1059 REMARK 465 ASP A 1060 REMARK 465 TYR A 1061 REMARK 465 ASP A 1062 REMARK 465 ILE A 1063 REMARK 465 PRO A 1064 REMARK 465 THR A 1065 REMARK 465 THR A 1066 REMARK 465 GLU A 1067 REMARK 465 ASN A 1068 REMARK 465 LEU A 1069 REMARK 465 TYR A 1070 REMARK 465 PHE A 1071 REMARK 465 GLN A 1072 REMARK 465 GLY A 1073 REMARK 465 ALA A 1074 REMARK 465 LEU A 1211 REMARK 465 CYS A 1212 REMARK 465 CYS A 1213 REMARK 465 TYR A 1214 REMARK 465 GLY A 1215 REMARK 465 LYS A 1216 REMARK 465 GLN A 1217 REMARK 465 LEU A 1218 REMARK 465 CYS A 1219 REMARK 465 THR A 1220 REMARK 465 ILE A 1221 REMARK 465 PRO A 1222 REMARK 465 ARG A 1223 REMARK 465 ASP A 1224 REMARK 465 ALA A 1225 REMARK 465 ALA A 1226 REMARK 465 TYR A 1227 REMARK 465 TYR A 1228 REMARK 465 SER A 1229 REMARK 465 TYR A 1230 REMARK 465 GLN A 1231 REMARK 465 ASN A 1232 REMARK 465 ARG A 1233 REMARK 465 TYR A 1234 REMARK 465 HIS A 1235 REMARK 465 PHE A 1236 REMARK 465 CYS A 1237 REMARK 465 GLU A 1238 REMARK 465 LYS A 1239 REMARK 465 CYS A 1240 REMARK 465 PHE A 1241 REMARK 465 THR A 1242 REMARK 465 GLU A 1243 REMARK 465 ILE A 1244 REMARK 465 GLN A 1245 REMARK 465 GLY A 1246 REMARK 465 GLU A 1247 REMARK 465 ASN A 1248 REMARK 465 VAL A 1249 REMARK 465 THR A 1250 REMARK 465 LEU A 1251 REMARK 465 GLY A 1252 REMARK 465 ASP A 1253 REMARK 465 ASP A 1254 REMARK 465 PRO A 1255 REMARK 465 SER A 1256 REMARK 465 GLN A 1257 REMARK 465 PRO A 1258 REMARK 465 GLN A 1259 REMARK 465 THR A 1260 REMARK 465 THR A 1261 REMARK 465 ILE A 1262 REMARK 465 SER A 1263 REMARK 465 LYS A 1264 REMARK 465 ASP A 1265 REMARK 465 GLN A 1266 REMARK 465 PHE A 1267 REMARK 465 GLU A 1268 REMARK 465 LYS A 1269 REMARK 465 LYS A 1270 REMARK 465 LYS A 1271 REMARK 465 ASN A 1272 REMARK 465 SER A 1613 REMARK 465 GLY A 1614 REMARK 465 GLY A 1615 REMARK 465 SER A 1616 REMARK 465 GLY A 1617 REMARK 465 SER A 1618 REMARK 465 GLN A 1619 REMARK 465 PRO A 1644A REMARK 465 VAL A 1644B REMARK 465 ILE A 1644C REMARK 465 SER A 1644D REMARK 465 THR A 1644E REMARK 465 CYS A 1732 REMARK 465 TYR A 1733 REMARK 465 ASN A 1734 REMARK 465 THR A 1735 REMARK 465 LYS A 1736 REMARK 465 SER A 1737 REMARK 465 GLY A 1746 REMARK 465 LEU A 1747 REMARK 465 GLY A 1748 REMARK 465 LEU A 1749 REMARK 465 ASP A 1750 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A1124 2.10 -64.31 REMARK 500 THR A1144 36.52 -94.87 REMARK 500 LEU A1166 -71.45 -78.52 REMARK 500 SER A1304 8.87 -68.02 REMARK 500 ARG A1319 157.70 -43.47 REMARK 500 GLU A1321 139.01 -39.92 REMARK 500 SER A1382 -135.80 -91.71 REMARK 500 MET A1412 124.44 -172.09 REMARK 500 ASN A1425 -2.72 -56.00 REMARK 500 HIS A1438 17.28 -64.68 REMARK 500 ARG A1441 -71.57 -33.94 REMARK 500 ARG A1443 -15.20 -47.59 REMARK 500 ALA A1473 74.80 -69.73 REMARK 500 ILE A1483 -52.50 -129.33 REMARK 500 LYS A1524 2.06 -66.00 REMARK 500 ARG A1530 93.57 55.92 REMARK 500 PRO A1653 -144.80 -77.94 REMARK 500 GLN A1697 20.63 -79.39 REMARK 500 VAL A1721 -57.09 -121.29 REMARK 500 ASP A1724 57.73 -150.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1199 SG REMARK 620 2 CYS A1200 SG 116.8 REMARK 620 3 HIS A1291 ND1 107.8 90.7 REMARK 620 4 CYS A1294 SG 117.2 108.9 112.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1283 SG REMARK 620 2 CYS A1286 SG 88.7 REMARK 620 3 CYS A1308 SG 103.7 110.9 REMARK 620 4 CYS A1311 SG 121.1 135.7 94.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1803 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1709 SG REMARK 620 2 CYS A1728 O 91.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1804 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1719 SG REMARK 620 2 CYS A1722 SG 95.5 REMARK 620 3 HIS A1738 NE2 114.8 106.4 REMARK 620 4 HIS A1740 ND1 142.5 117.7 74.0 REMARK 620 N 1 2 3 DBREF 8CND A 1085 1555 UNP F8VPR5 F8VPR5_MOUSE 1086 1556 DBREF 8CND A 1618 1750 UNP F8VPR5 F8VPR5_MOUSE 1619 1751 SEQADV 8CND HIS A 1054 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND HIS A 1055 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND HIS A 1056 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND HIS A 1057 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND HIS A 1058 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND HIS A 1059 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ASP A 1060 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND TYR A 1061 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ASP A 1062 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ILE A 1063 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND PRO A 1064 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND THR A 1065 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND THR A 1066 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND GLU A 1067 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ASN A 1068 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND LEU A 1069 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND TYR A 1070 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND PHE A 1071 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND GLN A 1072 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND GLY A 1073 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ALA A 1074 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND MET A 1075 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND GLY A 1076 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND SER A 1077 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND SER A 1078 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND GLN A 1079 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND PRO A 1080 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ARG A 1081 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND LYS A 1082 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND LYS A 1083 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ILE A 1084 UNP F8VPR5 EXPRESSION TAG SEQADV 8CND ASN A 1482 UNP F8VPR5 TYR 1483 ENGINEERED MUTATION SEQADV 8CND SER A 1613 UNP F8VPR5 LINKER SEQADV 8CND GLY A 1614 UNP F8VPR5 LINKER SEQADV 8CND GLY A 1615 UNP F8VPR5 LINKER SEQADV 8CND SER A 1616 UNP F8VPR5 LINKER SEQADV 8CND GLY A 1617 UNP F8VPR5 LINKER SEQRES 1 A 640 HIS HIS HIS HIS HIS HIS ASP TYR ASP ILE PRO THR THR SEQRES 2 A 640 GLU ASN LEU TYR PHE GLN GLY ALA MET GLY SER SER GLN SEQRES 3 A 640 PRO ARG LYS LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN SEQRES 4 A 640 ALA LEU MET PRO THR LEU GLU ALA LEU TYR ARG GLN ASP SEQRES 5 A 640 PRO GLU SER LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN SEQRES 6 A 640 LEU LEU GLY ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN SEQRES 7 A 640 PRO MET ASP LEU SER THR ILE LYS ARG LYS LEU ASP THR SEQRES 8 A 640 GLY GLN TYR GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL SEQRES 9 A 640 TRP LEU MET PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS SEQRES 10 A 640 THR SER ARG VAL TYR LYS PHE CYS SER LYS LEU ALA GLU SEQRES 11 A 640 VAL PHE GLU GLN GLU ILE ASP PRO VAL MET GLN SER LEU SEQRES 12 A 640 GLY TYR CYS CYS GLY ARG LYS TYR GLU PHE SER PRO GLN SEQRES 13 A 640 THR LEU CYS CYS TYR GLY LYS GLN LEU CYS THR ILE PRO SEQRES 14 A 640 ARG ASP ALA ALA TYR TYR SER TYR GLN ASN ARG TYR HIS SEQRES 15 A 640 PHE CYS GLU LYS CYS PHE THR GLU ILE GLN GLY GLU ASN SEQRES 16 A 640 VAL THR LEU GLY ASP ASP PRO SER GLN PRO GLN THR THR SEQRES 17 A 640 ILE SER LYS ASP GLN PHE GLU LYS LYS LYS ASN ASP THR SEQRES 18 A 640 LEU ASP PRO GLU PRO PHE VAL ASP CYS LYS GLU CYS GLY SEQRES 19 A 640 ARG LYS MET HIS GLN ILE CYS VAL LEU HIS TYR ASP ILE SEQRES 20 A 640 ILE TRP PRO SER GLY PHE VAL CYS ASP ASN CYS LEU LYS SEQRES 21 A 640 LYS THR GLY ARG PRO ARG LYS GLU ASN LYS PHE SER ALA SEQRES 22 A 640 LYS ARG LEU GLN THR THR ARG LEU GLY ASN HIS LEU GLU SEQRES 23 A 640 ASP ARG VAL ASN LYS PHE LEU ARG ARG GLN ASN HIS PRO SEQRES 24 A 640 GLU ALA GLY GLU VAL PHE VAL ARG VAL VAL ALA SER SER SEQRES 25 A 640 ASP LYS THR VAL GLU VAL LYS PRO GLY MET LYS SER ARG SEQRES 26 A 640 PHE VAL ASP SER GLY GLU MET SER GLU SER PHE PRO TYR SEQRES 27 A 640 ARG THR LYS ALA LEU PHE ALA PHE GLU GLU ILE ASP GLY SEQRES 28 A 640 VAL ASP VAL CYS PHE PHE GLY MET HIS VAL GLN GLU TYR SEQRES 29 A 640 GLY SER ASP CYS PRO PRO PRO ASN THR ARG ARG VAL TYR SEQRES 30 A 640 ILE SER TYR LEU ASP SER ILE HIS PHE PHE ARG PRO ARG SEQRES 31 A 640 CYS LEU ARG THR ALA VAL TYR HIS GLU ILE LEU ILE GLY SEQRES 32 A 640 TYR LEU GLU TYR VAL LYS LYS LEU GLY TYR VAL THR GLY SEQRES 33 A 640 HIS ILE TRP ALA CYS PRO PRO SER GLU GLY ASP ASP ASN SEQRES 34 A 640 ILE PHE HIS CYS HIS PRO PRO ASP GLN LYS ILE PRO LYS SEQRES 35 A 640 PRO LYS ARG LEU GLN GLU TRP TYR LYS LYS MET LEU ASP SEQRES 36 A 640 LYS ALA PHE ALA GLU ARG ILE ILE ASN ASP TYR LYS ASP SEQRES 37 A 640 ILE PHE LYS GLN ALA ASN GLU ASP ARG LEU THR SER ALA SEQRES 38 A 640 LYS GLU LEU PRO TYR PHE GLU GLY ASP PHE TRP PRO ASN SEQRES 39 A 640 VAL LEU GLU GLU SER ILE LYS GLU SER GLY GLY SER GLY SEQRES 40 A 640 SER GLN LYS LEU TYR ALA THR MET GLU LYS HIS LYS GLU SEQRES 41 A 640 VAL PHE PHE VAL ILE HIS LEU HIS ALA GLY PRO VAL ILE SEQRES 42 A 640 SER THR GLN PRO PRO ILE VAL ASP PRO ASP PRO LEU LEU SEQRES 43 A 640 SER CYS ASP LEU MET ASP GLY ARG ASP ALA PHE LEU THR SEQRES 44 A 640 LEU ALA ARG ASP LYS HIS TRP GLU PHE SER SER LEU ARG SEQRES 45 A 640 ARG SER LYS TRP SER THR LEU CYS MET LEU VAL GLU LEU SEQRES 46 A 640 HIS THR GLN GLY GLN ASP ARG PHE VAL TYR THR CYS ASN SEQRES 47 A 640 GLU CYS LYS HIS HIS VAL GLU THR ARG TRP HIS CYS THR SEQRES 48 A 640 VAL CYS GLU ASP TYR ASP LEU CYS ILE ASN CYS TYR ASN SEQRES 49 A 640 THR LYS SER HIS THR HIS LYS MET VAL LYS TRP GLY LEU SEQRES 50 A 640 GLY LEU ASP HET ZN A1801 1 HET ZN A1802 1 HET ZN A1803 1 HET ZN A1804 1 HET 01K A1805 64 HET ZN A1806 1 HETNAM ZN ZINC ION HETNAM 01K [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3- HETNAM 2 01K (PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R,20R)-20- HETNAM 3 01K CARBAMOYL-3-HYDROXY-2,2-DIMETHYL-4,8,14,22-TETRAOXO- HETNAM 4 01K 12-THIA-5,9,15,21-TETRAAZATRICOS-1-YL DIHYDROGEN HETNAM 5 01K DIPHOSPHATE HETSYN 01K LYSINE-COENZYME A DERIVATIVE FORMUL 2 ZN 5(ZN 2+) FORMUL 6 01K C31 H53 N10 O19 P3 S HELIX 1 AA1 LYS A 1086 ARG A 1103 1 18 HELIX 2 AA2 ASP A 1116 GLY A 1121 1 6 HELIX 3 AA3 ILE A 1122 ILE A 1128 5 7 HELIX 4 AA4 ASP A 1134 THR A 1144 1 11 HELIX 5 AA5 PRO A 1150 ASN A 1168 1 19 HELIX 6 AA6 SER A 1172 LEU A 1196 1 25 HELIX 7 AA7 GLN A 1292 LEU A 1296 1 5 HELIX 8 AA8 CYS A 1308 GLY A 1316 1 9 HELIX 9 AA9 THR A 1332 ASN A 1350 1 19 HELIX 10 AB1 LYS A 1372 VAL A 1380 1 9 HELIX 11 AB2 LEU A 1445 GLY A 1465 1 21 HELIX 12 AB3 LYS A 1495 GLU A 1513 1 19 HELIX 13 AB4 ILE A 1522 ASN A 1527 1 6 HELIX 14 AB5 SER A 1533 LEU A 1537 5 5 HELIX 15 AB6 ASP A 1543 SER A 1552 1 10 HELIX 16 AB7 LEU A 1621 HIS A 1628 1 8 HELIX 17 AB8 CYS A 1657 ASP A 1661 5 5 HELIX 18 AB9 GLY A 1662 HIS A 1674 1 13 HELIX 19 AC1 SER A 1679 GLN A 1697 1 19 SHEET 1 AA1 2 GLU A1205 PHE A1206 0 SHEET 2 AA1 2 ASP A1276 PRO A1277 -1 O ASP A1276 N PHE A1206 SHEET 1 AA2 2 PHE A1280 ASP A1282 0 SHEET 2 AA2 2 LYS A1289 HIS A1291 -1 O MET A1290 N VAL A1281 SHEET 1 AA3 4 VAL A1357 GLU A1370 0 SHEET 2 AA3 4 SER A1388 ILE A1402 -1 O PHE A1389 N VAL A1369 SHEET 3 AA3 4 VAL A1405 GLU A1416 -1 O VAL A1405 N ILE A1402 SHEET 4 AA3 4 VAL A1429 SER A1436 -1 O ASP A1435 N GLY A1411 SHEET 1 AA4 3 THR A1468 TRP A1472 0 SHEET 2 AA4 3 PHE A1632 HIS A1636 -1 O PHE A1633 N ILE A1471 SHEET 3 AA4 3 ASP A1518 ASP A1521 -1 N ASP A1518 O HIS A1636 SHEET 1 AA5 3 ASP A1726 LEU A1727 0 SHEET 2 AA5 3 ARG A1716 CYS A1719 -1 N TRP A1717 O LEU A1727 SHEET 3 AA5 3 MET A1742 TRP A1745 -1 O VAL A1743 N HIS A1718 LINK SG CYS A1199 ZN ZN A1801 1555 1555 2.53 LINK SG CYS A1200 ZN ZN A1801 1555 1555 2.31 LINK SG CYS A1283 ZN ZN A1802 1555 1555 2.35 LINK SG CYS A1286 ZN ZN A1802 1555 1555 2.60 LINK ND1 HIS A1291 ZN ZN A1801 1555 1555 1.92 LINK SG CYS A1294 ZN ZN A1801 1555 1555 2.28 LINK SG CYS A1308 ZN ZN A1802 1555 1555 2.23 LINK SG CYS A1311 ZN ZN A1802 1555 1555 2.43 LINK SG CYS A1709 ZN ZN A1803 1555 1555 2.62 LINK SG CYS A1719 ZN ZN A1804 1555 1555 2.42 LINK SG CYS A1722 ZN ZN A1804 1555 1555 2.30 LINK O CYS A1728 ZN ZN A1803 1555 1555 2.60 LINK NE2 HIS A1738 ZN ZN A1804 1555 1555 2.67 LINK ND1 HIS A1740 ZN ZN A1804 1555 1555 2.52 CISPEP 1 ASP A 1105 PRO A 1106 0 5.33 CISPEP 2 PRO A 1423 PRO A 1424 0 7.35 CRYST1 86.810 149.195 154.918 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011519 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006455 0.00000