data_8COG # _entry.id 8COG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8COG pdb_00008cog 10.2210/pdb8cog/pdb WWPDB D_1292123797 ? ? EMDB EMD-16776 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8COG _pdbx_database_status.recvd_initial_deposition_date 2023-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Human arginylated beta-actin' _pdbx_database_related.db_id EMD-16776 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email M.K.Balasubramanian@warwick.ac.uk _pdbx_contact_author.name_first Mohan _pdbx_contact_author.name_last Balasubramanian _pdbx_contact_author.name_mi K. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1292-8602 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pinto, C.S.' 1 ? 'Bakker, S.E.' 2 ? 'Suchenko, A.' 3 ? 'Hussain, H.' 4 ? 'Hatano, T.' 5 ? 'Sampath, K.' 6 ? 'Chinthalapudi, K.' 7 ? 'Mishima, M.' 8 ? 'Balasubramanian, M.' 9 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure and physiological investigation of human arginylated beta-actin' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pinto, C.S.' 1 ? primary 'Bakker, S.E.' 2 ? primary 'Suchenko, A.' 3 ? primary 'Hussain, H.' 4 ? primary 'Hatano, T.' 5 ? primary 'Sampath, K.' 6 ? primary 'Chinthalapudi, K.' 7 ? primary 'Mishima, M.' 8 ? primary 'Balasubramanian, M.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Actin, cytoplasmic 1, N-terminally processed' 41706.590 1 ? ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;RDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE(HIC)GIVT NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGD GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF ; _entity_poly.pdbx_seq_one_letter_code_can ;RDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF ; _entity_poly.pdbx_strand_id F _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 'MAGNESIUM ION' MG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ASP n 1 3 ASP n 1 4 ILE n 1 5 ALA n 1 6 ALA n 1 7 LEU n 1 8 VAL n 1 9 VAL n 1 10 ASP n 1 11 ASN n 1 12 GLY n 1 13 SER n 1 14 GLY n 1 15 MET n 1 16 CYS n 1 17 LYS n 1 18 ALA n 1 19 GLY n 1 20 PHE n 1 21 ALA n 1 22 GLY n 1 23 ASP n 1 24 ASP n 1 25 ALA n 1 26 PRO n 1 27 ARG n 1 28 ALA n 1 29 VAL n 1 30 PHE n 1 31 PRO n 1 32 SER n 1 33 ILE n 1 34 VAL n 1 35 GLY n 1 36 ARG n 1 37 PRO n 1 38 ARG n 1 39 HIS n 1 40 GLN n 1 41 GLY n 1 42 VAL n 1 43 MET n 1 44 VAL n 1 45 GLY n 1 46 MET n 1 47 GLY n 1 48 GLN n 1 49 LYS n 1 50 ASP n 1 51 SER n 1 52 TYR n 1 53 VAL n 1 54 GLY n 1 55 ASP n 1 56 GLU n 1 57 ALA n 1 58 GLN n 1 59 SER n 1 60 LYS n 1 61 ARG n 1 62 GLY n 1 63 ILE n 1 64 LEU n 1 65 THR n 1 66 LEU n 1 67 LYS n 1 68 TYR n 1 69 PRO n 1 70 ILE n 1 71 GLU n 1 72 HIC n 1 73 GLY n 1 74 ILE n 1 75 VAL n 1 76 THR n 1 77 ASN n 1 78 TRP n 1 79 ASP n 1 80 ASP n 1 81 MET n 1 82 GLU n 1 83 LYS n 1 84 ILE n 1 85 TRP n 1 86 HIS n 1 87 HIS n 1 88 THR n 1 89 PHE n 1 90 TYR n 1 91 ASN n 1 92 GLU n 1 93 LEU n 1 94 ARG n 1 95 VAL n 1 96 ALA n 1 97 PRO n 1 98 GLU n 1 99 GLU n 1 100 HIS n 1 101 PRO n 1 102 VAL n 1 103 LEU n 1 104 LEU n 1 105 THR n 1 106 GLU n 1 107 ALA n 1 108 PRO n 1 109 LEU n 1 110 ASN n 1 111 PRO n 1 112 LYS n 1 113 ALA n 1 114 ASN n 1 115 ARG n 1 116 GLU n 1 117 LYS n 1 118 MET n 1 119 THR n 1 120 GLN n 1 121 ILE n 1 122 MET n 1 123 PHE n 1 124 GLU n 1 125 THR n 1 126 PHE n 1 127 ASN n 1 128 THR n 1 129 PRO n 1 130 ALA n 1 131 MET n 1 132 TYR n 1 133 VAL n 1 134 ALA n 1 135 ILE n 1 136 GLN n 1 137 ALA n 1 138 VAL n 1 139 LEU n 1 140 SER n 1 141 LEU n 1 142 TYR n 1 143 ALA n 1 144 SER n 1 145 GLY n 1 146 ARG n 1 147 THR n 1 148 THR n 1 149 GLY n 1 150 ILE n 1 151 VAL n 1 152 MET n 1 153 ASP n 1 154 SER n 1 155 GLY n 1 156 ASP n 1 157 GLY n 1 158 VAL n 1 159 THR n 1 160 HIS n 1 161 THR n 1 162 VAL n 1 163 PRO n 1 164 ILE n 1 165 TYR n 1 166 GLU n 1 167 GLY n 1 168 TYR n 1 169 ALA n 1 170 LEU n 1 171 PRO n 1 172 HIS n 1 173 ALA n 1 174 ILE n 1 175 LEU n 1 176 ARG n 1 177 LEU n 1 178 ASP n 1 179 LEU n 1 180 ALA n 1 181 GLY n 1 182 ARG n 1 183 ASP n 1 184 LEU n 1 185 THR n 1 186 ASP n 1 187 TYR n 1 188 LEU n 1 189 MET n 1 190 LYS n 1 191 ILE n 1 192 LEU n 1 193 THR n 1 194 GLU n 1 195 ARG n 1 196 GLY n 1 197 TYR n 1 198 SER n 1 199 PHE n 1 200 THR n 1 201 THR n 1 202 THR n 1 203 ALA n 1 204 GLU n 1 205 ARG n 1 206 GLU n 1 207 ILE n 1 208 VAL n 1 209 ARG n 1 210 ASP n 1 211 ILE n 1 212 LYS n 1 213 GLU n 1 214 LYS n 1 215 LEU n 1 216 CYS n 1 217 TYR n 1 218 VAL n 1 219 ALA n 1 220 LEU n 1 221 ASP n 1 222 PHE n 1 223 GLU n 1 224 GLN n 1 225 GLU n 1 226 MET n 1 227 ALA n 1 228 THR n 1 229 ALA n 1 230 ALA n 1 231 SER n 1 232 SER n 1 233 SER n 1 234 SER n 1 235 LEU n 1 236 GLU n 1 237 LYS n 1 238 SER n 1 239 TYR n 1 240 GLU n 1 241 LEU n 1 242 PRO n 1 243 ASP n 1 244 GLY n 1 245 GLN n 1 246 VAL n 1 247 ILE n 1 248 THR n 1 249 ILE n 1 250 GLY n 1 251 ASN n 1 252 GLU n 1 253 ARG n 1 254 PHE n 1 255 ARG n 1 256 CYS n 1 257 PRO n 1 258 GLU n 1 259 ALA n 1 260 LEU n 1 261 PHE n 1 262 GLN n 1 263 PRO n 1 264 SER n 1 265 PHE n 1 266 LEU n 1 267 GLY n 1 268 MET n 1 269 GLU n 1 270 SER n 1 271 CYS n 1 272 GLY n 1 273 ILE n 1 274 HIS n 1 275 GLU n 1 276 THR n 1 277 THR n 1 278 PHE n 1 279 ASN n 1 280 SER n 1 281 ILE n 1 282 MET n 1 283 LYS n 1 284 CYS n 1 285 ASP n 1 286 VAL n 1 287 ASP n 1 288 ILE n 1 289 ARG n 1 290 LYS n 1 291 ASP n 1 292 LEU n 1 293 TYR n 1 294 ALA n 1 295 ASN n 1 296 THR n 1 297 VAL n 1 298 LEU n 1 299 SER n 1 300 GLY n 1 301 GLY n 1 302 THR n 1 303 THR n 1 304 MET n 1 305 TYR n 1 306 PRO n 1 307 GLY n 1 308 ILE n 1 309 ALA n 1 310 ASP n 1 311 ARG n 1 312 MET n 1 313 GLN n 1 314 LYS n 1 315 GLU n 1 316 ILE n 1 317 THR n 1 318 ALA n 1 319 LEU n 1 320 ALA n 1 321 PRO n 1 322 SER n 1 323 THR n 1 324 MET n 1 325 LYS n 1 326 ILE n 1 327 LYS n 1 328 ILE n 1 329 ILE n 1 330 ALA n 1 331 PRO n 1 332 PRO n 1 333 GLU n 1 334 ARG n 1 335 LYS n 1 336 TYR n 1 337 SER n 1 338 VAL n 1 339 TRP n 1 340 ILE n 1 341 GLY n 1 342 GLY n 1 343 SER n 1 344 ILE n 1 345 LEU n 1 346 ALA n 1 347 SER n 1 348 LEU n 1 349 SER n 1 350 THR n 1 351 PHE n 1 352 GLN n 1 353 GLN n 1 354 MET n 1 355 TRP n 1 356 ILE n 1 357 SER n 1 358 LYS n 1 359 GLN n 1 360 GLU n 1 361 TYR n 1 362 ASP n 1 363 GLU n 1 364 SER n 1 365 GLY n 1 366 PRO n 1 367 SER n 1 368 ILE n 1 369 VAL n 1 370 HIS n 1 371 ARG n 1 372 LYS n 1 373 CYS n 1 374 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 374 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ACTB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIC 'L-peptide linking' n 4-METHYL-HISTIDINE ? 'C7 H11 N3 O2' 169.181 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG F . n A 1 2 ASP 2 2 2 ASP ASP F . n A 1 3 ASP 3 3 3 ASP ASP F . n A 1 4 ILE 4 4 4 ILE ILE F . n A 1 5 ALA 5 5 5 ALA ALA F . n A 1 6 ALA 6 6 6 ALA ALA F . n A 1 7 LEU 7 7 7 LEU LEU F . n A 1 8 VAL 8 8 8 VAL VAL F . n A 1 9 VAL 9 9 9 VAL VAL F . n A 1 10 ASP 10 10 10 ASP ASP F . n A 1 11 ASN 11 11 11 ASN ASN F . n A 1 12 GLY 12 12 12 GLY GLY F . n A 1 13 SER 13 13 13 SER SER F . n A 1 14 GLY 14 14 14 GLY GLY F . n A 1 15 MET 15 15 15 MET MET F . n A 1 16 CYS 16 16 16 CYS CYS F . n A 1 17 LYS 17 17 17 LYS LYS F . n A 1 18 ALA 18 18 18 ALA ALA F . n A 1 19 GLY 19 19 19 GLY GLY F . n A 1 20 PHE 20 20 20 PHE PHE F . n A 1 21 ALA 21 21 21 ALA ALA F . n A 1 22 GLY 22 22 22 GLY GLY F . n A 1 23 ASP 23 23 23 ASP ASP F . n A 1 24 ASP 24 24 24 ASP ASP F . n A 1 25 ALA 25 25 25 ALA ALA F . n A 1 26 PRO 26 26 26 PRO PRO F . n A 1 27 ARG 27 27 27 ARG ARG F . n A 1 28 ALA 28 28 28 ALA ALA F . n A 1 29 VAL 29 29 29 VAL VAL F . n A 1 30 PHE 30 30 30 PHE PHE F . n A 1 31 PRO 31 31 31 PRO PRO F . n A 1 32 SER 32 32 32 SER SER F . n A 1 33 ILE 33 33 33 ILE ILE F . n A 1 34 VAL 34 34 34 VAL VAL F . n A 1 35 GLY 35 35 35 GLY GLY F . n A 1 36 ARG 36 36 36 ARG ARG F . n A 1 37 PRO 37 37 37 PRO PRO F . n A 1 38 ARG 38 38 38 ARG ARG F . n A 1 39 HIS 39 39 39 HIS HIS F . n A 1 40 GLN 40 40 40 GLN GLN F . n A 1 41 GLY 41 41 41 GLY GLY F . n A 1 42 VAL 42 42 42 VAL VAL F . n A 1 43 MET 43 43 43 MET MET F . n A 1 44 VAL 44 44 44 VAL VAL F . n A 1 45 GLY 45 45 45 GLY GLY F . n A 1 46 MET 46 46 46 MET MET F . n A 1 47 GLY 47 47 47 GLY GLY F . n A 1 48 GLN 48 48 48 GLN GLN F . n A 1 49 LYS 49 49 49 LYS LYS F . n A 1 50 ASP 50 50 50 ASP ASP F . n A 1 51 SER 51 51 51 SER SER F . n A 1 52 TYR 52 52 52 TYR TYR F . n A 1 53 VAL 53 53 53 VAL VAL F . n A 1 54 GLY 54 54 54 GLY GLY F . n A 1 55 ASP 55 55 55 ASP ASP F . n A 1 56 GLU 56 56 56 GLU GLU F . n A 1 57 ALA 57 57 57 ALA ALA F . n A 1 58 GLN 58 58 58 GLN GLN F . n A 1 59 SER 59 59 59 SER SER F . n A 1 60 LYS 60 60 60 LYS LYS F . n A 1 61 ARG 61 61 61 ARG ARG F . n A 1 62 GLY 62 62 62 GLY GLY F . n A 1 63 ILE 63 63 63 ILE ILE F . n A 1 64 LEU 64 64 64 LEU LEU F . n A 1 65 THR 65 65 65 THR THR F . n A 1 66 LEU 66 66 66 LEU LEU F . n A 1 67 LYS 67 67 67 LYS LYS F . n A 1 68 TYR 68 68 68 TYR TYR F . n A 1 69 PRO 69 69 69 PRO PRO F . n A 1 70 ILE 70 70 70 ILE ILE F . n A 1 71 GLU 71 71 71 GLU GLU F . n A 1 72 HIC 72 72 72 HIC HIC F . n A 1 73 GLY 73 73 73 GLY GLY F . n A 1 74 ILE 74 74 74 ILE ILE F . n A 1 75 VAL 75 75 75 VAL VAL F . n A 1 76 THR 76 76 76 THR THR F . n A 1 77 ASN 77 77 77 ASN ASN F . n A 1 78 TRP 78 78 78 TRP TRP F . n A 1 79 ASP 79 79 79 ASP ASP F . n A 1 80 ASP 80 80 80 ASP ASP F . n A 1 81 MET 81 81 81 MET MET F . n A 1 82 GLU 82 82 82 GLU GLU F . n A 1 83 LYS 83 83 83 LYS LYS F . n A 1 84 ILE 84 84 84 ILE ILE F . n A 1 85 TRP 85 85 85 TRP TRP F . n A 1 86 HIS 86 86 86 HIS HIS F . n A 1 87 HIS 87 87 87 HIS HIS F . n A 1 88 THR 88 88 88 THR THR F . n A 1 89 PHE 89 89 89 PHE PHE F . n A 1 90 TYR 90 90 90 TYR TYR F . n A 1 91 ASN 91 91 91 ASN ASN F . n A 1 92 GLU 92 92 92 GLU GLU F . n A 1 93 LEU 93 93 93 LEU LEU F . n A 1 94 ARG 94 94 94 ARG ARG F . n A 1 95 VAL 95 95 95 VAL VAL F . n A 1 96 ALA 96 96 96 ALA ALA F . n A 1 97 PRO 97 97 97 PRO PRO F . n A 1 98 GLU 98 98 98 GLU GLU F . n A 1 99 GLU 99 99 99 GLU GLU F . n A 1 100 HIS 100 100 100 HIS HIS F . n A 1 101 PRO 101 101 101 PRO PRO F . n A 1 102 VAL 102 102 102 VAL VAL F . n A 1 103 LEU 103 103 103 LEU LEU F . n A 1 104 LEU 104 104 104 LEU LEU F . n A 1 105 THR 105 105 105 THR THR F . n A 1 106 GLU 106 106 106 GLU GLU F . n A 1 107 ALA 107 107 107 ALA ALA F . n A 1 108 PRO 108 108 108 PRO PRO F . n A 1 109 LEU 109 109 109 LEU LEU F . n A 1 110 ASN 110 110 110 ASN ASN F . n A 1 111 PRO 111 111 111 PRO PRO F . n A 1 112 LYS 112 112 112 LYS LYS F . n A 1 113 ALA 113 113 113 ALA ALA F . n A 1 114 ASN 114 114 114 ASN ASN F . n A 1 115 ARG 115 115 115 ARG ARG F . n A 1 116 GLU 116 116 116 GLU GLU F . n A 1 117 LYS 117 117 117 LYS LYS F . n A 1 118 MET 118 118 118 MET MET F . n A 1 119 THR 119 119 119 THR THR F . n A 1 120 GLN 120 120 120 GLN GLN F . n A 1 121 ILE 121 121 121 ILE ILE F . n A 1 122 MET 122 122 122 MET MET F . n A 1 123 PHE 123 123 123 PHE PHE F . n A 1 124 GLU 124 124 124 GLU GLU F . n A 1 125 THR 125 125 125 THR THR F . n A 1 126 PHE 126 126 126 PHE PHE F . n A 1 127 ASN 127 127 127 ASN ASN F . n A 1 128 THR 128 128 128 THR THR F . n A 1 129 PRO 129 129 129 PRO PRO F . n A 1 130 ALA 130 130 130 ALA ALA F . n A 1 131 MET 131 131 131 MET MET F . n A 1 132 TYR 132 132 132 TYR TYR F . n A 1 133 VAL 133 133 133 VAL VAL F . n A 1 134 ALA 134 134 134 ALA ALA F . n A 1 135 ILE 135 135 135 ILE ILE F . n A 1 136 GLN 136 136 136 GLN GLN F . n A 1 137 ALA 137 137 137 ALA ALA F . n A 1 138 VAL 138 138 138 VAL VAL F . n A 1 139 LEU 139 139 139 LEU LEU F . n A 1 140 SER 140 140 140 SER SER F . n A 1 141 LEU 141 141 141 LEU LEU F . n A 1 142 TYR 142 142 142 TYR TYR F . n A 1 143 ALA 143 143 143 ALA ALA F . n A 1 144 SER 144 144 144 SER SER F . n A 1 145 GLY 145 145 145 GLY GLY F . n A 1 146 ARG 146 146 146 ARG ARG F . n A 1 147 THR 147 147 147 THR THR F . n A 1 148 THR 148 148 148 THR THR F . n A 1 149 GLY 149 149 149 GLY GLY F . n A 1 150 ILE 150 150 150 ILE ILE F . n A 1 151 VAL 151 151 151 VAL VAL F . n A 1 152 MET 152 152 152 MET MET F . n A 1 153 ASP 153 153 153 ASP ASP F . n A 1 154 SER 154 154 154 SER SER F . n A 1 155 GLY 155 155 155 GLY GLY F . n A 1 156 ASP 156 156 156 ASP ASP F . n A 1 157 GLY 157 157 157 GLY GLY F . n A 1 158 VAL 158 158 158 VAL VAL F . n A 1 159 THR 159 159 159 THR THR F . n A 1 160 HIS 160 160 160 HIS HIS F . n A 1 161 THR 161 161 161 THR THR F . n A 1 162 VAL 162 162 162 VAL VAL F . n A 1 163 PRO 163 163 163 PRO PRO F . n A 1 164 ILE 164 164 164 ILE ILE F . n A 1 165 TYR 165 165 165 TYR TYR F . n A 1 166 GLU 166 166 166 GLU GLU F . n A 1 167 GLY 167 167 167 GLY GLY F . n A 1 168 TYR 168 168 168 TYR TYR F . n A 1 169 ALA 169 169 169 ALA ALA F . n A 1 170 LEU 170 170 170 LEU LEU F . n A 1 171 PRO 171 171 171 PRO PRO F . n A 1 172 HIS 172 172 172 HIS HIS F . n A 1 173 ALA 173 173 173 ALA ALA F . n A 1 174 ILE 174 174 174 ILE ILE F . n A 1 175 LEU 175 175 175 LEU LEU F . n A 1 176 ARG 176 176 176 ARG ARG F . n A 1 177 LEU 177 177 177 LEU LEU F . n A 1 178 ASP 178 178 178 ASP ASP F . n A 1 179 LEU 179 179 179 LEU LEU F . n A 1 180 ALA 180 180 180 ALA ALA F . n A 1 181 GLY 181 181 181 GLY GLY F . n A 1 182 ARG 182 182 182 ARG ARG F . n A 1 183 ASP 183 183 183 ASP ASP F . n A 1 184 LEU 184 184 184 LEU LEU F . n A 1 185 THR 185 185 185 THR THR F . n A 1 186 ASP 186 186 186 ASP ASP F . n A 1 187 TYR 187 187 187 TYR TYR F . n A 1 188 LEU 188 188 188 LEU LEU F . n A 1 189 MET 189 189 189 MET MET F . n A 1 190 LYS 190 190 190 LYS LYS F . n A 1 191 ILE 191 191 191 ILE ILE F . n A 1 192 LEU 192 192 192 LEU LEU F . n A 1 193 THR 193 193 193 THR THR F . n A 1 194 GLU 194 194 194 GLU GLU F . n A 1 195 ARG 195 195 195 ARG ARG F . n A 1 196 GLY 196 196 196 GLY GLY F . n A 1 197 TYR 197 197 197 TYR TYR F . n A 1 198 SER 198 198 198 SER SER F . n A 1 199 PHE 199 199 199 PHE PHE F . n A 1 200 THR 200 200 200 THR THR F . n A 1 201 THR 201 201 201 THR THR F . n A 1 202 THR 202 202 202 THR THR F . n A 1 203 ALA 203 203 203 ALA ALA F . n A 1 204 GLU 204 204 204 GLU GLU F . n A 1 205 ARG 205 205 205 ARG ARG F . n A 1 206 GLU 206 206 206 GLU GLU F . n A 1 207 ILE 207 207 207 ILE ILE F . n A 1 208 VAL 208 208 208 VAL VAL F . n A 1 209 ARG 209 209 209 ARG ARG F . n A 1 210 ASP 210 210 210 ASP ASP F . n A 1 211 ILE 211 211 211 ILE ILE F . n A 1 212 LYS 212 212 212 LYS LYS F . n A 1 213 GLU 213 213 213 GLU GLU F . n A 1 214 LYS 214 214 214 LYS LYS F . n A 1 215 LEU 215 215 215 LEU LEU F . n A 1 216 CYS 216 216 216 CYS CYS F . n A 1 217 TYR 217 217 217 TYR TYR F . n A 1 218 VAL 218 218 218 VAL VAL F . n A 1 219 ALA 219 219 219 ALA ALA F . n A 1 220 LEU 220 220 220 LEU LEU F . n A 1 221 ASP 221 221 221 ASP ASP F . n A 1 222 PHE 222 222 222 PHE PHE F . n A 1 223 GLU 223 223 223 GLU GLU F . n A 1 224 GLN 224 224 224 GLN GLN F . n A 1 225 GLU 225 225 225 GLU GLU F . n A 1 226 MET 226 226 226 MET MET F . n A 1 227 ALA 227 227 227 ALA ALA F . n A 1 228 THR 228 228 228 THR THR F . n A 1 229 ALA 229 229 229 ALA ALA F . n A 1 230 ALA 230 230 230 ALA ALA F . n A 1 231 SER 231 231 231 SER SER F . n A 1 232 SER 232 232 232 SER SER F . n A 1 233 SER 233 233 233 SER SER F . n A 1 234 SER 234 234 234 SER SER F . n A 1 235 LEU 235 235 235 LEU LEU F . n A 1 236 GLU 236 236 236 GLU GLU F . n A 1 237 LYS 237 237 237 LYS LYS F . n A 1 238 SER 238 238 238 SER SER F . n A 1 239 TYR 239 239 239 TYR TYR F . n A 1 240 GLU 240 240 240 GLU GLU F . n A 1 241 LEU 241 241 241 LEU LEU F . n A 1 242 PRO 242 242 242 PRO PRO F . n A 1 243 ASP 243 243 243 ASP ASP F . n A 1 244 GLY 244 244 244 GLY GLY F . n A 1 245 GLN 245 245 245 GLN GLN F . n A 1 246 VAL 246 246 246 VAL VAL F . n A 1 247 ILE 247 247 247 ILE ILE F . n A 1 248 THR 248 248 248 THR THR F . n A 1 249 ILE 249 249 249 ILE ILE F . n A 1 250 GLY 250 250 250 GLY GLY F . n A 1 251 ASN 251 251 251 ASN ASN F . n A 1 252 GLU 252 252 252 GLU GLU F . n A 1 253 ARG 253 253 253 ARG ARG F . n A 1 254 PHE 254 254 254 PHE PHE F . n A 1 255 ARG 255 255 255 ARG ARG F . n A 1 256 CYS 256 256 256 CYS CYS F . n A 1 257 PRO 257 257 257 PRO PRO F . n A 1 258 GLU 258 258 258 GLU GLU F . n A 1 259 ALA 259 259 259 ALA ALA F . n A 1 260 LEU 260 260 260 LEU LEU F . n A 1 261 PHE 261 261 261 PHE PHE F . n A 1 262 GLN 262 262 262 GLN GLN F . n A 1 263 PRO 263 263 263 PRO PRO F . n A 1 264 SER 264 264 264 SER SER F . n A 1 265 PHE 265 265 265 PHE PHE F . n A 1 266 LEU 266 266 266 LEU LEU F . n A 1 267 GLY 267 267 267 GLY GLY F . n A 1 268 MET 268 268 268 MET MET F . n A 1 269 GLU 269 269 269 GLU GLU F . n A 1 270 SER 270 270 270 SER SER F . n A 1 271 CYS 271 271 271 CYS CYS F . n A 1 272 GLY 272 272 272 GLY GLY F . n A 1 273 ILE 273 273 273 ILE ILE F . n A 1 274 HIS 274 274 274 HIS HIS F . n A 1 275 GLU 275 275 275 GLU GLU F . n A 1 276 THR 276 276 276 THR THR F . n A 1 277 THR 277 277 277 THR THR F . n A 1 278 PHE 278 278 278 PHE PHE F . n A 1 279 ASN 279 279 279 ASN ASN F . n A 1 280 SER 280 280 280 SER SER F . n A 1 281 ILE 281 281 281 ILE ILE F . n A 1 282 MET 282 282 282 MET MET F . n A 1 283 LYS 283 283 283 LYS LYS F . n A 1 284 CYS 284 284 284 CYS CYS F . n A 1 285 ASP 285 285 285 ASP ASP F . n A 1 286 VAL 286 286 286 VAL VAL F . n A 1 287 ASP 287 287 287 ASP ASP F . n A 1 288 ILE 288 288 288 ILE ILE F . n A 1 289 ARG 289 289 289 ARG ARG F . n A 1 290 LYS 290 290 290 LYS LYS F . n A 1 291 ASP 291 291 291 ASP ASP F . n A 1 292 LEU 292 292 292 LEU LEU F . n A 1 293 TYR 293 293 293 TYR TYR F . n A 1 294 ALA 294 294 294 ALA ALA F . n A 1 295 ASN 295 295 295 ASN ASN F . n A 1 296 THR 296 296 296 THR THR F . n A 1 297 VAL 297 297 297 VAL VAL F . n A 1 298 LEU 298 298 298 LEU LEU F . n A 1 299 SER 299 299 299 SER SER F . n A 1 300 GLY 300 300 300 GLY GLY F . n A 1 301 GLY 301 301 301 GLY GLY F . n A 1 302 THR 302 302 302 THR THR F . n A 1 303 THR 303 303 303 THR THR F . n A 1 304 MET 304 304 304 MET MET F . n A 1 305 TYR 305 305 305 TYR TYR F . n A 1 306 PRO 306 306 306 PRO PRO F . n A 1 307 GLY 307 307 307 GLY GLY F . n A 1 308 ILE 308 308 308 ILE ILE F . n A 1 309 ALA 309 309 309 ALA ALA F . n A 1 310 ASP 310 310 310 ASP ASP F . n A 1 311 ARG 311 311 311 ARG ARG F . n A 1 312 MET 312 312 312 MET MET F . n A 1 313 GLN 313 313 313 GLN GLN F . n A 1 314 LYS 314 314 314 LYS LYS F . n A 1 315 GLU 315 315 315 GLU GLU F . n A 1 316 ILE 316 316 316 ILE ILE F . n A 1 317 THR 317 317 317 THR THR F . n A 1 318 ALA 318 318 318 ALA ALA F . n A 1 319 LEU 319 319 319 LEU LEU F . n A 1 320 ALA 320 320 320 ALA ALA F . n A 1 321 PRO 321 321 321 PRO PRO F . n A 1 322 SER 322 322 322 SER SER F . n A 1 323 THR 323 323 323 THR THR F . n A 1 324 MET 324 324 324 MET MET F . n A 1 325 LYS 325 325 325 LYS LYS F . n A 1 326 ILE 326 326 326 ILE ILE F . n A 1 327 LYS 327 327 327 LYS LYS F . n A 1 328 ILE 328 328 328 ILE ILE F . n A 1 329 ILE 329 329 329 ILE ILE F . n A 1 330 ALA 330 330 330 ALA ALA F . n A 1 331 PRO 331 331 331 PRO PRO F . n A 1 332 PRO 332 332 332 PRO PRO F . n A 1 333 GLU 333 333 333 GLU GLU F . n A 1 334 ARG 334 334 334 ARG ARG F . n A 1 335 LYS 335 335 335 LYS LYS F . n A 1 336 TYR 336 336 336 TYR TYR F . n A 1 337 SER 337 337 337 SER SER F . n A 1 338 VAL 338 338 338 VAL VAL F . n A 1 339 TRP 339 339 339 TRP TRP F . n A 1 340 ILE 340 340 340 ILE ILE F . n A 1 341 GLY 341 341 341 GLY GLY F . n A 1 342 GLY 342 342 342 GLY GLY F . n A 1 343 SER 343 343 343 SER SER F . n A 1 344 ILE 344 344 344 ILE ILE F . n A 1 345 LEU 345 345 345 LEU LEU F . n A 1 346 ALA 346 346 346 ALA ALA F . n A 1 347 SER 347 347 347 SER SER F . n A 1 348 LEU 348 348 348 LEU LEU F . n A 1 349 SER 349 349 349 SER SER F . n A 1 350 THR 350 350 350 THR THR F . n A 1 351 PHE 351 351 351 PHE PHE F . n A 1 352 GLN 352 352 352 GLN GLN F . n A 1 353 GLN 353 353 353 GLN GLN F . n A 1 354 MET 354 354 354 MET MET F . n A 1 355 TRP 355 355 355 TRP TRP F . n A 1 356 ILE 356 356 356 ILE ILE F . n A 1 357 SER 357 357 357 SER SER F . n A 1 358 LYS 358 358 358 LYS LYS F . n A 1 359 GLN 359 359 359 GLN GLN F . n A 1 360 GLU 360 360 360 GLU GLU F . n A 1 361 TYR 361 361 361 TYR TYR F . n A 1 362 ASP 362 362 362 ASP ASP F . n A 1 363 GLU 363 363 363 GLU GLU F . n A 1 364 SER 364 364 364 SER SER F . n A 1 365 GLY 365 365 365 GLY GLY F . n A 1 366 PRO 366 366 366 PRO PRO F . n A 1 367 SER 367 367 367 SER SER F . n A 1 368 ILE 368 368 368 ILE ILE F . n A 1 369 VAL 369 369 369 VAL VAL F . n A 1 370 HIS 370 370 370 HIS HIS F . n A 1 371 ARG 371 371 371 ARG ARG F . n A 1 372 LYS 372 372 372 LYS LYS F . n A 1 373 CYS 373 373 373 CYS CYS F . n A 1 374 PHE 374 374 374 PHE PHE F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 401 401 ADP ADP F . C 3 MG 1 402 402 MG MG F . # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author 'Garib N. Murshudov' _software.contact_author_email garib@mrc-lmb.cam.ac.uk _software.date 2020-24-08 _software.description '(un)restrained refinement or idealisation of macromolecular structures' _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name REFMAC _software.os ? _software.os_version ? _software.type ? _software.version 5.8.0267 _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8COG _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8COG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8COG _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 77.447 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.806 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8COG _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.499 _refine.ls_d_res_low 3.499 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work 28866 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.000 _refine.ls_percent_reflns_R_free 0.000 _refine.ls_R_factor_all 0.360 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.3599 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work 0.360 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'BABINET MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.508 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 20.983 _refine.overall_SU_ML 0.319 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall 0.8232 _refine.pdbx_average_fsc_work 0.8232 _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.009 0.013 3012 ? r_bond_refined_d ? ? 'ELECTRON MICROSCOPY' ? 0.001 0.017 2823 ? r_bond_other_d ? ? 'ELECTRON MICROSCOPY' ? 1.635 1.648 4086 ? r_angle_refined_deg ? ? 'ELECTRON MICROSCOPY' ? 1.342 1.576 6524 ? r_angle_other_deg ? ? 'ELECTRON MICROSCOPY' ? 7.048 5.000 373 ? r_dihedral_angle_1_deg ? ? 'ELECTRON MICROSCOPY' ? 36.528 22.109 147 ? r_dihedral_angle_2_deg ? ? 'ELECTRON MICROSCOPY' ? 17.594 15.000 517 ? r_dihedral_angle_3_deg ? ? 'ELECTRON MICROSCOPY' ? 17.907 15.000 19 ? r_dihedral_angle_4_deg ? ? 'ELECTRON MICROSCOPY' ? 0.071 0.200 405 ? r_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.007 0.020 3368 ? r_gen_planes_refined ? ? 'ELECTRON MICROSCOPY' ? 0.003 0.020 662 ? r_gen_planes_other ? ? 'ELECTRON MICROSCOPY' ? 0.210 0.200 1446 ? r_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? 0.193 0.200 5716 ? r_symmetry_nbd_other ? ? 'ELECTRON MICROSCOPY' ? 0.166 0.200 2990 ? r_nbtor_refined ? ? 'ELECTRON MICROSCOPY' ? 0.077 0.200 3152 ? r_symmetry_nbtor_other ? ? 'ELECTRON MICROSCOPY' ? 0.155 0.200 122 ? r_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? 0.060 0.200 4 ? r_symmetry_xyhbond_nbd_other ? ? 'ELECTRON MICROSCOPY' ? 10.347 7.215 1494 ? r_mcbond_it ? ? 'ELECTRON MICROSCOPY' ? 10.345 7.215 1494 ? r_mcbond_other ? ? 'ELECTRON MICROSCOPY' ? 17.088 10.806 1866 ? r_mcangle_it ? ? 'ELECTRON MICROSCOPY' ? 17.085 10.819 1867 ? r_mcangle_other ? ? 'ELECTRON MICROSCOPY' ? 12.834 8.954 1518 ? r_scbond_it ? ? 'ELECTRON MICROSCOPY' ? 12.834 8.954 1518 ? r_scbond_other ? ? 'ELECTRON MICROSCOPY' ? 21.726 12.697 2220 ? r_scangle_it ? ? 'ELECTRON MICROSCOPY' ? 21.721 12.693 2221 ? r_scangle_other ? ? 'ELECTRON MICROSCOPY' ? 36.106 140.253 12140 ? r_lrange_it ? ? 'ELECTRON MICROSCOPY' ? 36.105 140.243 12141 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'ELECTRON MICROSCOPY' 3.400 3.488 2123 . 0 2123 100.0000 . 1.036 . . 1.036 . . . . . 1.036 . 20 . 0.490 . . 'ELECTRON MICROSCOPY' 3.488 3.584 2078 . 0 2078 100.0000 . 0.650 . . 0.650 . . . . . 0.650 . 20 . 0.607 . . 'ELECTRON MICROSCOPY' 3.584 3.687 2007 . 0 2007 100.0000 . 0.476 . . 0.476 . . . . . 0.476 . 20 . 0.701 . . 'ELECTRON MICROSCOPY' 3.687 3.801 1950 . 0 1950 100.0000 . 0.438 . . 0.438 . . . . . 0.438 . 20 . 0.742 . . 'ELECTRON MICROSCOPY' 3.801 3.925 1885 . 0 1885 100.0000 . 0.384 . . 0.384 . . . . . 0.384 . 20 . 0.806 . . 'ELECTRON MICROSCOPY' 3.925 4.063 1882 . 0 1882 100.0000 . 0.328 . . 0.328 . . . . . 0.328 . 20 . 0.857 . . 'ELECTRON MICROSCOPY' 4.063 4.216 1811 . 0 1811 100.0000 . 0.299 . . 0.299 . . . . . 0.299 . 20 . 0.891 . . 'ELECTRON MICROSCOPY' 4.216 4.387 1635 . 0 1635 100.0000 . 0.299 . . 0.299 . . . . . 0.299 . 20 . 0.915 . . 'ELECTRON MICROSCOPY' 4.387 4.582 1684 . 0 1684 100.0000 . 0.313 . . 0.313 . . . . . 0.313 . 20 . 0.933 . . 'ELECTRON MICROSCOPY' 4.582 4.805 1567 . 0 1567 100.0000 . 0.317 . . 0.317 . . . . . 0.317 . 20 . 0.941 . . 'ELECTRON MICROSCOPY' 4.805 5.064 1489 . 0 1489 100.0000 . 0.305 . . 0.305 . . . . . 0.305 . 20 . 0.942 . . 'ELECTRON MICROSCOPY' 5.064 5.370 1421 . 0 1421 100.0000 . 0.299 . . 0.299 . . . . . 0.299 . 20 . 0.929 . . 'ELECTRON MICROSCOPY' 5.370 5.739 1332 . 0 1332 100.0000 . 0.285 . . 0.285 . . . . . 0.285 . 20 . 0.911 . . 'ELECTRON MICROSCOPY' 5.739 6.197 1247 . 0 1247 100.0000 . 0.285 . . 0.285 . . . . . 0.285 . 20 . 0.897 . . 'ELECTRON MICROSCOPY' 6.197 6.785 1133 . 0 1133 100.0000 . 0.302 . . 0.302 . . . . . 0.302 . 20 . 0.883 . . 'ELECTRON MICROSCOPY' 6.785 7.580 1039 . 0 1039 100.0000 . 0.325 . . 0.325 . . . . . 0.325 . 20 . 0.876 . . 'ELECTRON MICROSCOPY' 7.580 8.742 894 . 0 894 100.0000 . 0.307 . . 0.307 . . . . . 0.307 . 20 . 0.873 . . 'ELECTRON MICROSCOPY' 8.742 10.681 741 . 0 741 100.0000 . 0.263 . . 0.263 . . . . . 0.263 . 20 . 0.905 . . 'ELECTRON MICROSCOPY' 10.681 14.997 610 . 0 610 100.0000 . 0.261 . . 0.261 . . . . . 0.261 . 20 . 0.942 . . 'ELECTRON MICROSCOPY' 14.997 88.560 338 . 0 338 100.0000 . 0.778 . . 0.778 . . . . . 0.778 . 20 . 0.978 . . # _struct.entry_id 8COG _struct.title 'Human arginylated beta-actin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8COG _struct_keywords.text 'actin, methylated, filament, CONTRACTILE PROTEIN' _struct_keywords.pdbx_keywords 'CONTRACTILE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ACTB_HUMAN _struct_ref.pdbx_db_accession P60709 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8COG _struct_ref_seq.pdbx_strand_id F _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 374 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P60709 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 375 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 374 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 8COG _struct_ref_seq_dif.mon_id ARG _struct_ref_seq_dif.pdbx_pdb_strand_id F _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P60709 _struct_ref_seq_dif.db_mon_id ASP _struct_ref_seq_dif.pdbx_seq_db_seq_num 2 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1000 ? 1 MORE -19 ? 1 'SSA (A^2)' 16660 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 54 ? LYS A 60 ? GLY F 54 LYS F 60 1 ? 7 HELX_P HELX_P2 AA2 ASN A 77 ? ASN A 91 ? ASN F 77 ASN F 91 1 ? 15 HELX_P HELX_P3 AA3 PRO A 111 ? THR A 125 ? PRO F 111 THR F 125 1 ? 15 HELX_P HELX_P4 AA4 GLN A 136 ? GLY A 145 ? GLN F 136 GLY F 145 1 ? 10 HELX_P HELX_P5 AA5 PRO A 171 ? ILE A 174 ? PRO F 171 ILE F 174 5 ? 4 HELX_P HELX_P6 AA6 ALA A 180 ? THR A 193 ? ALA F 180 THR F 193 1 ? 14 HELX_P HELX_P7 AA7 THR A 201 ? CYS A 216 ? THR F 201 CYS F 216 1 ? 16 HELX_P HELX_P8 AA8 ASP A 221 ? SER A 232 ? ASP F 221 SER F 232 1 ? 12 HELX_P HELX_P9 AA9 GLY A 250 ? ARG A 255 ? GLY F 250 ARG F 255 5 ? 6 HELX_P HELX_P10 AB1 CYS A 256 ? GLN A 262 ? CYS F 256 GLN F 262 5 ? 7 HELX_P HELX_P11 AB2 GLY A 272 ? MET A 282 ? GLY F 272 MET F 282 1 ? 11 HELX_P HELX_P12 AB3 ASP A 285 ? ALA A 294 ? ASP F 285 ALA F 294 1 ? 10 HELX_P HELX_P13 AB4 GLY A 307 ? ALA A 320 ? GLY F 307 ALA F 320 1 ? 14 HELX_P HELX_P14 AB5 GLU A 333 ? LYS A 335 ? GLU F 333 LYS F 335 5 ? 3 HELX_P HELX_P15 AB6 TYR A 336 ? LEU A 348 ? TYR F 336 LEU F 348 1 ? 13 HELX_P HELX_P16 AB7 LYS A 358 ? GLY A 365 ? LYS F 358 GLY F 365 1 ? 8 HELX_P HELX_P17 AB8 ILE A 368 ? CYS A 373 ? ILE F 368 CYS F 373 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 216 SG ? ? ? 1_555 A CYS 256 SG ? ? F CYS 216 F CYS 256 1_555 ? ? ? ? ? ? ? 2.097 ? ? covale1 covale both ? A GLU 71 C ? ? ? 1_555 A HIC 72 N ? ? F GLU 71 F HIC 72 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale2 covale both ? A HIC 72 C ? ? ? 1_555 A GLY 73 N ? ? F HIC 72 F GLY 73 1_555 ? ? ? ? ? ? ? 1.332 ? ? metalc1 metalc ? ? B ADP . O2B ? ? ? 1_555 C MG . MG ? ? F ADP 401 F MG 402 1_555 ? ? ? ? ? ? ? 2.435 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 3 ? AA5 ? 5 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 16 ? LYS A 17 ? CYS F 16 LYS F 17 AA1 2 LEU A 7 ? ASN A 11 ? LEU F 7 ASN F 11 AA1 3 VAL A 102 ? GLU A 106 ? VAL F 102 GLU F 106 AA1 4 ALA A 130 ? ILE A 135 ? ALA F 130 ILE F 135 AA1 5 ILE A 356 ? SER A 357 ? ILE F 356 SER F 357 AA2 1 TYR A 52 ? VAL A 53 ? TYR F 52 VAL F 53 AA2 2 VAL A 34 ? PRO A 37 ? VAL F 34 PRO F 37 AA2 3 LEU A 64 ? LYS A 67 ? LEU F 64 LYS F 67 AA3 1 ILE A 70 ? GLU A 71 ? ILE F 70 GLU F 71 AA3 2 ILE A 74 ? VAL A 75 ? ILE F 74 VAL F 75 AA4 1 TYR A 168 ? ALA A 169 ? TYR F 168 ALA F 169 AA4 2 THR A 159 ? TYR A 165 ? THR F 159 TYR F 165 AA4 3 LEU A 175 ? LEU A 177 ? LEU F 175 LEU F 177 AA5 1 TYR A 168 ? ALA A 169 ? TYR F 168 ALA F 169 AA5 2 THR A 159 ? TYR A 165 ? THR F 159 TYR F 165 AA5 3 GLY A 149 ? SER A 154 ? GLY F 149 SER F 154 AA5 4 ASN A 295 ? SER A 299 ? ASN F 295 SER F 299 AA5 5 LYS A 327 ? ILE A 328 ? LYS F 327 ILE F 328 AA6 1 LYS A 237 ? GLU A 240 ? LYS F 237 GLU F 240 AA6 2 VAL A 246 ? ILE A 249 ? VAL F 246 ILE F 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS A 17 ? O LYS F 17 N ASP A 10 ? N ASP F 10 AA1 2 3 N VAL A 9 ? N VAL F 9 O LEU A 103 ? O LEU F 103 AA1 3 4 N LEU A 104 ? N LEU F 104 O TYR A 132 ? O TYR F 132 AA1 4 5 N MET A 131 ? N MET F 131 O ILE A 356 ? O ILE F 356 AA2 1 2 O TYR A 52 ? O TYR F 52 N GLY A 35 ? N GLY F 35 AA2 2 3 N ARG A 36 ? N ARG F 36 O THR A 65 ? O THR F 65 AA3 1 2 N GLU A 71 ? N GLU F 71 O ILE A 74 ? O ILE F 74 AA4 1 2 O TYR A 168 ? O TYR F 168 N TYR A 165 ? N TYR F 165 AA4 2 3 N THR A 159 ? N THR F 159 O LEU A 177 ? O LEU F 177 AA5 1 2 O TYR A 168 ? O TYR F 168 N TYR A 165 ? N TYR F 165 AA5 2 3 O ILE A 164 ? O ILE F 164 N GLY A 149 ? N GLY F 149 AA5 3 4 N MET A 152 ? N MET F 152 O VAL A 297 ? O VAL F 297 AA5 4 5 N THR A 296 ? N THR F 296 O LYS A 327 ? O LYS F 327 AA6 1 2 N LYS A 237 ? N LYS F 237 O ILE A 249 ? O ILE F 249 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C F PHE 374 ? ? O F PHE 374 ? ? 0.861 1.229 -0.368 0.019 N 2 1 C F PHE 374 ? ? OXT F PHE 374 ? ? 1.547 1.229 0.318 0.019 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP F 10 ? ? -101.37 61.01 2 1 HIC F 72 ? ? 76.95 32.48 3 1 ALA F 180 ? ? -161.26 -165.10 4 1 ALA F 330 ? ? 38.60 63.22 5 1 GLU F 333 ? ? -92.51 30.12 6 1 THR F 350 ? ? 79.98 -7.17 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id HIC _pdbx_struct_mod_residue.label_seq_id 72 _pdbx_struct_mod_residue.auth_asym_id F _pdbx_struct_mod_residue.auth_comp_id HIC _pdbx_struct_mod_residue.auth_seq_id 72 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id HIS _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_entry_details.entry_id 8COG _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8COG _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8COG _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details 'RELION 3.09 was used throughout using helical reconstruction.' _em_3d_reconstruction.resolution 3.499 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 42701 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ;Actin for EM was polymerized by mixing, 20 ul 20 uM G-actin, 8 ul 10x MKE and 52 ul 5 mM HEPES-KOH pH 7.4 containing 0.2 mM ATP and 0.5 mM DTT and incubating at RT for 1 hour. ; _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Polymerised arginylated actin with bound ADP' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8COG _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 700 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 75000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 50.0 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R3.5/1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8COG _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE-PROPANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'LEICA EM GP' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8COG _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CYS N N N N 116 CYS CA C N R 117 CYS C C N N 118 CYS O O N N 119 CYS CB C N N 120 CYS SG S N N 121 CYS OXT O N N 122 CYS H H N N 123 CYS H2 H N N 124 CYS HA H N N 125 CYS HB2 H N N 126 CYS HB3 H N N 127 CYS HG H N N 128 CYS HXT H N N 129 GLN N N N N 130 GLN CA C N S 131 GLN C C N N 132 GLN O O N N 133 GLN CB C N N 134 GLN CG C N N 135 GLN CD C N N 136 GLN OE1 O N N 137 GLN NE2 N N N 138 GLN OXT O N N 139 GLN H H N N 140 GLN H2 H N N 141 GLN HA H N N 142 GLN HB2 H N N 143 GLN HB3 H N N 144 GLN HG2 H N N 145 GLN HG3 H N N 146 GLN HE21 H N N 147 GLN HE22 H N N 148 GLN HXT H N N 149 GLU N N N N 150 GLU CA C N S 151 GLU C C N N 152 GLU O O N N 153 GLU CB C N N 154 GLU CG C N N 155 GLU CD C N N 156 GLU OE1 O N N 157 GLU OE2 O N N 158 GLU OXT O N N 159 GLU H H N N 160 GLU H2 H N N 161 GLU HA H N N 162 GLU HB2 H N N 163 GLU HB3 H N N 164 GLU HG2 H N N 165 GLU HG3 H N N 166 GLU HE2 H N N 167 GLU HXT H N N 168 GLY N N N N 169 GLY CA C N N 170 GLY C C N N 171 GLY O O N N 172 GLY OXT O N N 173 GLY H H N N 174 GLY H2 H N N 175 GLY HA2 H N N 176 GLY HA3 H N N 177 GLY HXT H N N 178 HIC N N N N 179 HIC CA C N S 180 HIC C C N N 181 HIC O O N N 182 HIC CB C N N 183 HIC CG C Y N 184 HIC ND1 N Y N 185 HIC CD2 C Y N 186 HIC CE1 C Y N 187 HIC NE2 N Y N 188 HIC CZ C N N 189 HIC OXT O N N 190 HIC H H N N 191 HIC H2 H N N 192 HIC HA H N N 193 HIC HB2 H N N 194 HIC HB3 H N N 195 HIC HD2 H N N 196 HIC HE1 H N N 197 HIC HZ1 H N N 198 HIC HZ2 H N N 199 HIC HZ3 H N N 200 HIC HXT H N N 201 HIS N N N N 202 HIS CA C N S 203 HIS C C N N 204 HIS O O N N 205 HIS CB C N N 206 HIS CG C Y N 207 HIS ND1 N Y N 208 HIS CD2 C Y N 209 HIS CE1 C Y N 210 HIS NE2 N Y N 211 HIS OXT O N N 212 HIS H H N N 213 HIS H2 H N N 214 HIS HA H N N 215 HIS HB2 H N N 216 HIS HB3 H N N 217 HIS HD1 H N N 218 HIS HD2 H N N 219 HIS HE1 H N N 220 HIS HE2 H N N 221 HIS HXT H N N 222 ILE N N N N 223 ILE CA C N S 224 ILE C C N N 225 ILE O O N N 226 ILE CB C N S 227 ILE CG1 C N N 228 ILE CG2 C N N 229 ILE CD1 C N N 230 ILE OXT O N N 231 ILE H H N N 232 ILE H2 H N N 233 ILE HA H N N 234 ILE HB H N N 235 ILE HG12 H N N 236 ILE HG13 H N N 237 ILE HG21 H N N 238 ILE HG22 H N N 239 ILE HG23 H N N 240 ILE HD11 H N N 241 ILE HD12 H N N 242 ILE HD13 H N N 243 ILE HXT H N N 244 LEU N N N N 245 LEU CA C N S 246 LEU C C N N 247 LEU O O N N 248 LEU CB C N N 249 LEU CG C N N 250 LEU CD1 C N N 251 LEU CD2 C N N 252 LEU OXT O N N 253 LEU H H N N 254 LEU H2 H N N 255 LEU HA H N N 256 LEU HB2 H N N 257 LEU HB3 H N N 258 LEU HG H N N 259 LEU HD11 H N N 260 LEU HD12 H N N 261 LEU HD13 H N N 262 LEU HD21 H N N 263 LEU HD22 H N N 264 LEU HD23 H N N 265 LEU HXT H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 MET N N N N 292 MET CA C N S 293 MET C C N N 294 MET O O N N 295 MET CB C N N 296 MET CG C N N 297 MET SD S N N 298 MET CE C N N 299 MET OXT O N N 300 MET H H N N 301 MET H2 H N N 302 MET HA H N N 303 MET HB2 H N N 304 MET HB3 H N N 305 MET HG2 H N N 306 MET HG3 H N N 307 MET HE1 H N N 308 MET HE2 H N N 309 MET HE3 H N N 310 MET HXT H N N 311 MG MG MG N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 GLN N CA sing N N 127 GLN N H sing N N 128 GLN N H2 sing N N 129 GLN CA C sing N N 130 GLN CA CB sing N N 131 GLN CA HA sing N N 132 GLN C O doub N N 133 GLN C OXT sing N N 134 GLN CB CG sing N N 135 GLN CB HB2 sing N N 136 GLN CB HB3 sing N N 137 GLN CG CD sing N N 138 GLN CG HG2 sing N N 139 GLN CG HG3 sing N N 140 GLN CD OE1 doub N N 141 GLN CD NE2 sing N N 142 GLN NE2 HE21 sing N N 143 GLN NE2 HE22 sing N N 144 GLN OXT HXT sing N N 145 GLU N CA sing N N 146 GLU N H sing N N 147 GLU N H2 sing N N 148 GLU CA C sing N N 149 GLU CA CB sing N N 150 GLU CA HA sing N N 151 GLU C O doub N N 152 GLU C OXT sing N N 153 GLU CB CG sing N N 154 GLU CB HB2 sing N N 155 GLU CB HB3 sing N N 156 GLU CG CD sing N N 157 GLU CG HG2 sing N N 158 GLU CG HG3 sing N N 159 GLU CD OE1 doub N N 160 GLU CD OE2 sing N N 161 GLU OE2 HE2 sing N N 162 GLU OXT HXT sing N N 163 GLY N CA sing N N 164 GLY N H sing N N 165 GLY N H2 sing N N 166 GLY CA C sing N N 167 GLY CA HA2 sing N N 168 GLY CA HA3 sing N N 169 GLY C O doub N N 170 GLY C OXT sing N N 171 GLY OXT HXT sing N N 172 HIC N CA sing N N 173 HIC N H sing N N 174 HIC N H2 sing N N 175 HIC CA C sing N N 176 HIC CA CB sing N N 177 HIC CA HA sing N N 178 HIC C O doub N N 179 HIC C OXT sing N N 180 HIC CB CG sing N N 181 HIC CB HB2 sing N N 182 HIC CB HB3 sing N N 183 HIC CG ND1 sing Y N 184 HIC CG CD2 doub Y N 185 HIC ND1 CE1 doub Y N 186 HIC CD2 NE2 sing Y N 187 HIC CD2 HD2 sing N N 188 HIC CE1 NE2 sing Y N 189 HIC CE1 HE1 sing N N 190 HIC NE2 CZ sing N N 191 HIC CZ HZ1 sing N N 192 HIC CZ HZ2 sing N N 193 HIC CZ HZ3 sing N N 194 HIC OXT HXT sing N N 195 HIS N CA sing N N 196 HIS N H sing N N 197 HIS N H2 sing N N 198 HIS CA C sing N N 199 HIS CA CB sing N N 200 HIS CA HA sing N N 201 HIS C O doub N N 202 HIS C OXT sing N N 203 HIS CB CG sing N N 204 HIS CB HB2 sing N N 205 HIS CB HB3 sing N N 206 HIS CG ND1 sing Y N 207 HIS CG CD2 doub Y N 208 HIS ND1 CE1 doub Y N 209 HIS ND1 HD1 sing N N 210 HIS CD2 NE2 sing Y N 211 HIS CD2 HD2 sing N N 212 HIS CE1 NE2 sing Y N 213 HIS CE1 HE1 sing N N 214 HIS NE2 HE2 sing N N 215 HIS OXT HXT sing N N 216 ILE N CA sing N N 217 ILE N H sing N N 218 ILE N H2 sing N N 219 ILE CA C sing N N 220 ILE CA CB sing N N 221 ILE CA HA sing N N 222 ILE C O doub N N 223 ILE C OXT sing N N 224 ILE CB CG1 sing N N 225 ILE CB CG2 sing N N 226 ILE CB HB sing N N 227 ILE CG1 CD1 sing N N 228 ILE CG1 HG12 sing N N 229 ILE CG1 HG13 sing N N 230 ILE CG2 HG21 sing N N 231 ILE CG2 HG22 sing N N 232 ILE CG2 HG23 sing N N 233 ILE CD1 HD11 sing N N 234 ILE CD1 HD12 sing N N 235 ILE CD1 HD13 sing N N 236 ILE OXT HXT sing N N 237 LEU N CA sing N N 238 LEU N H sing N N 239 LEU N H2 sing N N 240 LEU CA C sing N N 241 LEU CA CB sing N N 242 LEU CA HA sing N N 243 LEU C O doub N N 244 LEU C OXT sing N N 245 LEU CB CG sing N N 246 LEU CB HB2 sing N N 247 LEU CB HB3 sing N N 248 LEU CG CD1 sing N N 249 LEU CG CD2 sing N N 250 LEU CG HG sing N N 251 LEU CD1 HD11 sing N N 252 LEU CD1 HD12 sing N N 253 LEU CD1 HD13 sing N N 254 LEU CD2 HD21 sing N N 255 LEU CD2 HD22 sing N N 256 LEU CD2 HD23 sing N N 257 LEU OXT HXT sing N N 258 LYS N CA sing N N 259 LYS N H sing N N 260 LYS N H2 sing N N 261 LYS CA C sing N N 262 LYS CA CB sing N N 263 LYS CA HA sing N N 264 LYS C O doub N N 265 LYS C OXT sing N N 266 LYS CB CG sing N N 267 LYS CB HB2 sing N N 268 LYS CB HB3 sing N N 269 LYS CG CD sing N N 270 LYS CG HG2 sing N N 271 LYS CG HG3 sing N N 272 LYS CD CE sing N N 273 LYS CD HD2 sing N N 274 LYS CD HD3 sing N N 275 LYS CE NZ sing N N 276 LYS CE HE2 sing N N 277 LYS CE HE3 sing N N 278 LYS NZ HZ1 sing N N 279 LYS NZ HZ2 sing N N 280 LYS NZ HZ3 sing N N 281 LYS OXT HXT sing N N 282 MET N CA sing N N 283 MET N H sing N N 284 MET N H2 sing N N 285 MET CA C sing N N 286 MET CA CB sing N N 287 MET CA HA sing N N 288 MET C O doub N N 289 MET C OXT sing N N 290 MET CB CG sing N N 291 MET CB HB2 sing N N 292 MET CB HB3 sing N N 293 MET CG SD sing N N 294 MET CG HG2 sing N N 295 MET CG HG3 sing N N 296 MET SD CE sing N N 297 MET CE HE1 sing N N 298 MET CE HE2 sing N N 299 MET CE HE3 sing N N 300 MET OXT HXT sing N N 301 PHE N CA sing N N 302 PHE N H sing N N 303 PHE N H2 sing N N 304 PHE CA C sing N N 305 PHE CA CB sing N N 306 PHE CA HA sing N N 307 PHE C O doub N N 308 PHE C OXT sing N N 309 PHE CB CG sing N N 310 PHE CB HB2 sing N N 311 PHE CB HB3 sing N N 312 PHE CG CD1 doub Y N 313 PHE CG CD2 sing Y N 314 PHE CD1 CE1 sing Y N 315 PHE CD1 HD1 sing N N 316 PHE CD2 CE2 doub Y N 317 PHE CD2 HD2 sing N N 318 PHE CE1 CZ doub Y N 319 PHE CE1 HE1 sing N N 320 PHE CE2 CZ sing Y N 321 PHE CE2 HE2 sing N N 322 PHE CZ HZ sing N N 323 PHE OXT HXT sing N N 324 PRO N CA sing N N 325 PRO N CD sing N N 326 PRO N H sing N N 327 PRO CA C sing N N 328 PRO CA CB sing N N 329 PRO CA HA sing N N 330 PRO C O doub N N 331 PRO C OXT sing N N 332 PRO CB CG sing N N 333 PRO CB HB2 sing N N 334 PRO CB HB3 sing N N 335 PRO CG CD sing N N 336 PRO CG HG2 sing N N 337 PRO CG HG3 sing N N 338 PRO CD HD2 sing N N 339 PRO CD HD3 sing N N 340 PRO OXT HXT sing N N 341 SER N CA sing N N 342 SER N H sing N N 343 SER N H2 sing N N 344 SER CA C sing N N 345 SER CA CB sing N N 346 SER CA HA sing N N 347 SER C O doub N N 348 SER C OXT sing N N 349 SER CB OG sing N N 350 SER CB HB2 sing N N 351 SER CB HB3 sing N N 352 SER OG HG sing N N 353 SER OXT HXT sing N N 354 THR N CA sing N N 355 THR N H sing N N 356 THR N H2 sing N N 357 THR CA C sing N N 358 THR CA CB sing N N 359 THR CA HA sing N N 360 THR C O doub N N 361 THR C OXT sing N N 362 THR CB OG1 sing N N 363 THR CB CG2 sing N N 364 THR CB HB sing N N 365 THR OG1 HG1 sing N N 366 THR CG2 HG21 sing N N 367 THR CG2 HG22 sing N N 368 THR CG2 HG23 sing N N 369 THR OXT HXT sing N N 370 TRP N CA sing N N 371 TRP N H sing N N 372 TRP N H2 sing N N 373 TRP CA C sing N N 374 TRP CA CB sing N N 375 TRP CA HA sing N N 376 TRP C O doub N N 377 TRP C OXT sing N N 378 TRP CB CG sing N N 379 TRP CB HB2 sing N N 380 TRP CB HB3 sing N N 381 TRP CG CD1 doub Y N 382 TRP CG CD2 sing Y N 383 TRP CD1 NE1 sing Y N 384 TRP CD1 HD1 sing N N 385 TRP CD2 CE2 doub Y N 386 TRP CD2 CE3 sing Y N 387 TRP NE1 CE2 sing Y N 388 TRP NE1 HE1 sing N N 389 TRP CE2 CZ2 sing Y N 390 TRP CE3 CZ3 doub Y N 391 TRP CE3 HE3 sing N N 392 TRP CZ2 CH2 doub Y N 393 TRP CZ2 HZ2 sing N N 394 TRP CZ3 CH2 sing Y N 395 TRP CZ3 HZ3 sing N N 396 TRP CH2 HH2 sing N N 397 TRP OXT HXT sing N N 398 TYR N CA sing N N 399 TYR N H sing N N 400 TYR N H2 sing N N 401 TYR CA C sing N N 402 TYR CA CB sing N N 403 TYR CA HA sing N N 404 TYR C O doub N N 405 TYR C OXT sing N N 406 TYR CB CG sing N N 407 TYR CB HB2 sing N N 408 TYR CB HB3 sing N N 409 TYR CG CD1 doub Y N 410 TYR CG CD2 sing Y N 411 TYR CD1 CE1 sing Y N 412 TYR CD1 HD1 sing N N 413 TYR CD2 CE2 doub Y N 414 TYR CD2 HD2 sing N N 415 TYR CE1 CZ doub Y N 416 TYR CE1 HE1 sing N N 417 TYR CE2 CZ sing Y N 418 TYR CE2 HE2 sing N N 419 TYR CZ OH sing N N 420 TYR OH HH sing N N 421 TYR OXT HXT sing N N 422 VAL N CA sing N N 423 VAL N H sing N N 424 VAL N H2 sing N N 425 VAL CA C sing N N 426 VAL CA CB sing N N 427 VAL CA HA sing N N 428 VAL C O doub N N 429 VAL C OXT sing N N 430 VAL CB CG1 sing N N 431 VAL CB CG2 sing N N 432 VAL CB HB sing N N 433 VAL CG1 HG11 sing N N 434 VAL CG1 HG12 sing N N 435 VAL CG1 HG13 sing N N 436 VAL CG2 HG21 sing N N 437 VAL CG2 HG22 sing N N 438 VAL CG2 HG23 sing N N 439 VAL OXT HXT sing N N 440 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 4922 _em_entity_assembly_recombinant.organism 'Komagataella pastoris' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 60 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 42 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? RELION 3.09 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? RELION ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' Servalcat 9 ? 1 ? REFMAC ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United Kingdom' WT101885MA 1 'European Research Council (ERC)' 'European Union' '671083-ACTOMYOSIN RING' 2 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/S003789/1 3 'Wellcome Trust' 'United Kingdom' 203276/Z/16/Z 4 # _atom_sites.entry_id 8COG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 MG 12 12 5.427 2.828 2.176 79.261 1.228 0.381 2.310 7.194 0.859 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 P 15 15 6.435 1.907 4.179 27.157 1.780 0.526 1.491 68.164 1.115 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_