HEADER OXIDOREDUCTASE 07-MAR-23 8CQS TITLE FLAVIN MONONUCLEOTIDE-DEPENDENT NITROREDUCTASE B.THETAIOTAOMICRON TITLE 2 (BT_0217) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROREDUCTASE-LIKE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BT_0217; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NITROREDUCTASE, FLAVIN MONONUCLEOTIDE DEPENDENT, NADH DEHYDROGENASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.BLAHA,S.GRATZL,S.A.MORTENSEN,K.S.H.BECKHAM,G.CHOJNOWSKI,M.WILMANNS, AUTHOR 2 M.ZIMMERMANN REVDAT 1 27-MAR-24 8CQS 0 JRNL AUTH J.BLAHA,L.ADAM,S.GRATZTL,G.CHOJNOWSKI,C.LITZ,S.A.MORTENSEN, JRNL AUTH 2 M.ZIMMERMANN,K.S.H.BECKHAM,M.WILMANNS JRNL TITL STRUCTURAL INSIGHTS INTO THE DIVERSITY OF NITROREDUCTASE JRNL TITL 2 ENZYMES IN BACTEROIDES THETAIOTAOMICRON JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.19 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 37180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.779 REMARK 3 FREE R VALUE TEST SET COUNT : 1777 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2301 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 104 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2913 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.87100 REMARK 3 B22 (A**2) : -0.13100 REMARK 3 B33 (A**2) : 0.64600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.22500 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.096 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.094 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.902 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3047 ; 0.014 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2871 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4129 ; 1.910 ; 1.635 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6698 ; 0.658 ; 1.566 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 388 ; 6.280 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 16 ; 7.965 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 541 ;15.536 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 473 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3417 ; 0.017 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 535 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 589 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 49 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1536 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 139 ; 0.123 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1552 ; 2.076 ; 1.731 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1552 ; 2.076 ; 1.731 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1940 ; 2.809 ; 2.586 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1941 ; 2.809 ; 2.587 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1495 ; 3.766 ; 2.109 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1484 ; 3.708 ; 2.105 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2189 ; 5.633 ; 2.974 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2178 ; 5.549 ; 2.963 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 11 A 201 NULL REMARK 3 1 A 11 A 201 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): -19.4429 -0.0494 13.0939 REMARK 3 T TENSOR REMARK 3 T11: 0.0039 T22: 0.0062 REMARK 3 T33: 0.0181 T12: 0.0010 REMARK 3 T13: 0.0080 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.6809 L22: 0.4663 REMARK 3 L33: 0.6234 L12: -0.0774 REMARK 3 L13: -0.0613 L23: -0.0503 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: 0.0617 S13: 0.0473 REMARK 3 S21: -0.0183 S22: -0.0006 S23: -0.0418 REMARK 3 S31: 0.0042 S32: 0.0116 S33: -0.0088 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -32.1973 0.2762 34.3644 REMARK 3 T TENSOR REMARK 3 T11: 0.0294 T22: 0.0167 REMARK 3 T33: 0.0074 T12: 0.0072 REMARK 3 T13: 0.0081 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.4339 L22: 0.5704 REMARK 3 L33: 1.0007 L12: -0.0708 REMARK 3 L13: 0.1204 L23: 0.0872 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.0712 S13: -0.0110 REMARK 3 S21: 0.1196 S22: 0.0153 S23: 0.0130 REMARK 3 S31: 0.0108 S32: -0.0567 S33: -0.0018 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8CQS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292125991. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS FEB 5, 2021 (BUILT 20210323) REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37180 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 38.193 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.18400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 9.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 38.19 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 0.09200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.9.02 REMARK 200 STARTING MODEL: AF-Q8AB93-F1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12MM SODIUM NITRATE, 12MM SODIUM REMARK 280 PHOSPHATE, 12MM AMMONIUM SULPHATE, PH 5.5, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.01500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.20500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.01500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 22.20500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 4 REMARK 465 VAL A 5 REMARK 465 LEU A 6 REMARK 465 PHE A 7 REMARK 465 GLN A 8 REMARK 465 GLY A 9 REMARK 465 PRO A 10 REMARK 465 ALA B 1 REMARK 465 GLY B 2 REMARK 465 LEU B 3 REMARK 465 GLU B 4 REMARK 465 VAL B 5 REMARK 465 LEU B 6 REMARK 465 PHE B 7 REMARK 465 GLN B 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ALA B 95 O HOH B 401 1.45 REMARK 500 OE1 GLN A 139 O HOH A 401 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 69 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 69 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 24 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG B 69 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 69 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG B 134 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 172 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 59 42.10 -160.96 REMARK 500 ASN B 59 43.85 -162.27 REMARK 500 MET B 175 161.98 176.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 24 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8CQS A 11 202 UNP Q8AB93 Q8AB93_BACTN 9 200 DBREF 8CQS B 11 202 UNP Q8AB93 Q8AB93_BACTN 9 200 SEQADV 8CQS ALA A 1 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLY A 2 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS LEU A 3 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLU A 4 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS VAL A 5 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS LEU A 6 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS PHE A 7 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLN A 8 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLY A 9 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS PRO A 10 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS ALA B 1 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLY B 2 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS LEU B 3 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLU B 4 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS VAL B 5 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS LEU B 6 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS PHE B 7 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLN B 8 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS GLY B 9 UNP Q8AB93 EXPRESSION TAG SEQADV 8CQS PRO B 10 UNP Q8AB93 EXPRESSION TAG SEQRES 1 A 202 ALA GLY LEU GLU VAL LEU PHE GLN GLY PRO ALA ASP LYS SEQRES 2 A 202 VAL VAL LYS LEU PRO LYS PRO ASN LEU ASN ARG THR GLY SEQRES 3 A 202 THR VAL MET LYS ALA LEU SER GLU ARG GLN SER THR ARG SEQRES 4 A 202 GLU TYR ALA SER LYS ALA LEU THR LEU ALA ASP LEU SER SEQRES 5 A 202 ASP LEU LEU TRP ALA ALA ASN GLY ILE ASN ARG SER ASP SEQRES 6 A 202 ALA GLY LYS ARG THR ALA PRO SER ALA MET ASN LYS GLN SEQRES 7 A 202 ASP VAL ASP VAL TYR VAL ILE LEU SER GLU GLY SER TYR SEQRES 8 A 202 LEU TYR ASP ALA LYS ASN HIS GLN LEU ASN LEU ILE ALA SEQRES 9 A 202 GLU GLY ASP TYR ARG GLY ALA VAL ALA GLY GLY GLN ALA SEQRES 10 A 202 PHE VAL LYS THR ALA PRO VAL SER LEU VAL LEU ILE SER SEQRES 11 A 202 ASP VAL SER ARG PHE GLY ASP ALA GLN LYS ILE GLN ASN SEQRES 12 A 202 GLN LEU MET GLY ALA MET ASP ALA GLY ILE VAL SER GLN SEQRES 13 A 202 ASN ILE SER ILE PHE CYS SER ALA ALA LYS LEU ALA THR SEQRES 14 A 202 VAL PRO ARG ALA SER MET ASP ALA ALA GLN LEU LYS LYS SEQRES 15 A 202 VAL LEU LYS LEU LYS ASP SER GLN ILE PRO MET MET ASN SEQRES 16 A 202 HIS PRO VAL GLY TYR PHE LYS SEQRES 1 B 202 ALA GLY LEU GLU VAL LEU PHE GLN GLY PRO ALA ASP LYS SEQRES 2 B 202 VAL VAL LYS LEU PRO LYS PRO ASN LEU ASN ARG THR GLY SEQRES 3 B 202 THR VAL MET LYS ALA LEU SER GLU ARG GLN SER THR ARG SEQRES 4 B 202 GLU TYR ALA SER LYS ALA LEU THR LEU ALA ASP LEU SER SEQRES 5 B 202 ASP LEU LEU TRP ALA ALA ASN GLY ILE ASN ARG SER ASP SEQRES 6 B 202 ALA GLY LYS ARG THR ALA PRO SER ALA MET ASN LYS GLN SEQRES 7 B 202 ASP VAL ASP VAL TYR VAL ILE LEU SER GLU GLY SER TYR SEQRES 8 B 202 LEU TYR ASP ALA LYS ASN HIS GLN LEU ASN LEU ILE ALA SEQRES 9 B 202 GLU GLY ASP TYR ARG GLY ALA VAL ALA GLY GLY GLN ALA SEQRES 10 B 202 PHE VAL LYS THR ALA PRO VAL SER LEU VAL LEU ILE SER SEQRES 11 B 202 ASP VAL SER ARG PHE GLY ASP ALA GLN LYS ILE GLN ASN SEQRES 12 B 202 GLN LEU MET GLY ALA MET ASP ALA GLY ILE VAL SER GLN SEQRES 13 B 202 ASN ILE SER ILE PHE CYS SER ALA ALA LYS LEU ALA THR SEQRES 14 B 202 VAL PRO ARG ALA SER MET ASP ALA ALA GLN LEU LYS LYS SEQRES 15 B 202 VAL LEU LYS LEU LYS ASP SER GLN ILE PRO MET MET ASN SEQRES 16 B 202 HIS PRO VAL GLY TYR PHE LYS HET FMN A 301 50 HET PO4 A 302 5 HET FMN B 301 50 HET PO4 B 302 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM PO4 PHOSPHATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 PO4 2(O4 P 3-) FORMUL 7 HOH *162(H2 O) HELIX 1 AA1 THR A 27 ARG A 35 1 9 HELIX 2 AA2 THR A 47 GLY A 60 1 14 HELIX 3 AA3 SER A 73 LYS A 77 5 5 HELIX 4 AA4 TYR A 108 GLY A 114 1 7 HELIX 5 AA5 GLN A 116 ALA A 122 5 7 HELIX 6 AA6 SER A 133 GLY A 136 5 4 HELIX 7 AA7 LYS A 140 LYS A 166 1 27 HELIX 8 AA8 ASP A 176 LEU A 184 1 9 HELIX 9 AA9 THR B 27 ARG B 35 1 9 HELIX 10 AB1 THR B 47 GLY B 60 1 14 HELIX 11 AB2 SER B 73 LYS B 77 5 5 HELIX 12 AB3 TYR B 108 GLY B 114 1 7 HELIX 13 AB4 GLN B 116 ALA B 122 5 7 HELIX 14 AB5 SER B 133 GLY B 136 5 4 HELIX 15 AB6 LYS B 140 LYS B 166 1 27 HELIX 16 AB7 ASP B 176 LEU B 184 1 9 SHEET 1 AA1 7 VAL A 14 LYS A 16 0 SHEET 2 AA1 7 GLN A 99 GLU A 105 -1 O LEU A 100 N VAL A 15 SHEET 3 AA1 7 GLY A 89 ASP A 94 -1 N SER A 90 O ILE A 103 SHEET 4 AA1 7 VAL A 80 ILE A 85 -1 N VAL A 84 O TYR A 91 SHEET 5 AA1 7 VAL A 124 ASP A 131 -1 O SER A 125 N ILE A 85 SHEET 6 AA1 7 GLN A 190 TYR A 200 -1 O MET A 194 N LEU A 128 SHEET 7 AA1 7 LEU A 167 THR A 169 -1 N ALA A 168 O GLY A 199 SHEET 1 AA2 2 ILE A 61 ARG A 63 0 SHEET 2 AA2 2 LYS A 68 ARG A 69 -1 O LYS A 68 N ASN A 62 SHEET 1 AA3 7 VAL B 14 LYS B 16 0 SHEET 2 AA3 7 GLN B 99 GLU B 105 -1 O LEU B 100 N VAL B 15 SHEET 3 AA3 7 GLY B 89 ASP B 94 -1 N SER B 90 O ILE B 103 SHEET 4 AA3 7 VAL B 80 ILE B 85 -1 N VAL B 84 O TYR B 91 SHEET 5 AA3 7 VAL B 124 ASP B 131 -1 O SER B 125 N ILE B 85 SHEET 6 AA3 7 GLN B 190 TYR B 200 -1 O MET B 194 N LEU B 128 SHEET 7 AA3 7 LEU B 167 THR B 169 -1 N ALA B 168 O GLY B 199 SHEET 1 AA4 2 ILE B 61 ARG B 63 0 SHEET 2 AA4 2 LYS B 68 ARG B 69 -1 O LYS B 68 N ASN B 62 CRYST1 80.030 44.410 103.040 90.00 110.74 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012495 0.000000 0.004731 0.00000 SCALE2 0.000000 0.022517 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010377 0.00000