HEADER OXIDOREDUCTASE 07-MAR-23 8CQU TITLE FLAVIN MONONUCLEOTIDE-DEPENDENT NITROREDUCTASE B.THETAIOTAOMICRON TITLE 2 (BT_1680) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE NADH DEHYDROGENASE/NAD(P)H NITROREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BT_1680; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NITROREDUCTASE, FLAVIN MONONUCLEOTIDE DEPENDENT, NADH DEHYDROGENASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.BLAHA,L.ADAM,K.S.H.BECKHAM,G.CHOJNOWSKI,M.WILMANNS,M.ZIMMERMANN REVDAT 1 27-MAR-24 8CQU 0 JRNL AUTH J.BLAHA,L.ADAM,S.GRATZL,G.CHOJNOWSKI,C.LITZ,S.A.MORTENSEN, JRNL AUTH 2 M.ZIMMERMANN,K.S.H.BECKHAM,M.WILMANNS JRNL TITL STRUCTURAL INSIGHTS INTO THE DIVERSITY OF NITROREDUCTASE JRNL TITL 2 ENZYMES IN BACTEROIDES THETAIOTAOMICRON JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 27591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.857 REMARK 3 FREE R VALUE TEST SET COUNT : 1340 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1943 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2623 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 125 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.93500 REMARK 3 B22 (A**2) : 3.51200 REMARK 3 B33 (A**2) : -1.64200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.46300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.130 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.169 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2695 ; 0.014 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2535 ; 0.007 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3636 ; 1.925 ; 1.624 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5915 ; 0.731 ; 1.569 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 333 ; 7.154 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 12 ;12.933 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 505 ;16.555 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 411 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3002 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 498 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 532 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 65 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1306 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 116 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1338 ; 3.379 ; 2.843 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1338 ; 3.349 ; 2.843 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1669 ; 4.329 ; 4.247 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1670 ; 4.328 ; 4.249 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1357 ; 5.082 ; 3.460 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1358 ; 5.080 ; 3.460 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1967 ; 7.177 ; 4.942 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1968 ; 7.175 ; 4.942 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 14 A 180 NULL REMARK 3 1 A 14 A 180 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9441 -1.4311 13.9599 REMARK 3 T TENSOR REMARK 3 T11: 0.0136 T22: 0.0291 REMARK 3 T33: 0.0248 T12: 0.0135 REMARK 3 T13: 0.0115 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.4188 L22: 0.7050 REMARK 3 L33: 1.2810 L12: 0.0728 REMARK 3 L13: -0.1806 L23: 0.3238 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: -0.0016 S13: 0.0092 REMARK 3 S21: 0.0140 S22: 0.0107 S23: 0.0324 REMARK 3 S31: -0.0710 S32: -0.1437 S33: -0.0603 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 15.1577 -15.1002 3.4425 REMARK 3 T TENSOR REMARK 3 T11: 0.0481 T22: 0.0115 REMARK 3 T33: 0.0684 T12: -0.0165 REMARK 3 T13: 0.0059 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.4787 L22: 0.7692 REMARK 3 L33: 0.9579 L12: -0.1660 REMARK 3 L13: -0.0894 L23: 0.1924 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: 0.0125 S13: -0.1098 REMARK 3 S21: -0.0340 S22: 0.0490 S23: 0.0099 REMARK 3 S31: 0.1713 S32: -0.0666 S33: -0.0426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8CQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292126226. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976257 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS FEB 5, 2021 (BUILT 20210323) REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27611 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 69.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 9.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 69.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.09800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.9.02 REMARK 200 STARTING MODEL: AF-Q8A745-F1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% T-BUTANOL, 1.6M SODIUM CITRATE, PH REMARK 280 6.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.71300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 MET A 3 REMARK 465 GLU A 4 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 MET B 3 REMARK 465 GLU B 4 REMARK 465 ASN B 5 REMARK 465 PHE B 6 REMARK 465 SER B 7 REMARK 465 GLU B 8 REMARK 465 LEU B 9 REMARK 465 ILE B 10 REMARK 465 LYS B 11 REMARK 465 ASN B 12 REMARK 465 ARG B 13 REMARK 465 MET B 157 REMARK 465 GLU B 158 REMARK 465 ARG B 159 REMARK 465 LYS B 160 REMARK 465 PRO B 161 REMARK 465 PHE B 162 REMARK 465 ASN B 163 REMARK 465 GLU B 164 REMARK 465 GLU B 165 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER B 15 H ARG B 17 1.30 REMARK 500 HZ3 LYS A 43 HG SER A 89 1.32 REMARK 500 HD21 ASN A 46 OE1 GLN B 168 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 67 CD GLU A 67 OE2 0.089 REMARK 500 GLU B 57 CD GLU B 57 OE2 0.103 REMARK 500 GLU B 132 CD GLU B 132 OE1 0.097 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 21 CB - CA - C ANGL. DEV. = -14.3 DEGREES REMARK 500 MET B 38 CG - SD - CE ANGL. DEV. = -9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 46 77.64 63.14 REMARK 500 GLU A 67 -108.40 45.08 REMARK 500 VAL A 91 43.63 -109.74 REMARK 500 ASN A 175 -28.99 73.56 REMARK 500 ASN B 175 -28.02 70.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 159 0.10 SIDE CHAIN REMARK 500 ARG B 14 0.18 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8CQU A 3 180 UNP Q8A745 Q8A745_BACTN 1 178 DBREF 8CQU B 3 180 UNP Q8A745 Q8A745_BACTN 1 178 SEQADV 8CQU GLY A 1 UNP Q8A745 EXPRESSION TAG SEQADV 8CQU PRO A 2 UNP Q8A745 EXPRESSION TAG SEQADV 8CQU GLY B 1 UNP Q8A745 EXPRESSION TAG SEQADV 8CQU PRO B 2 UNP Q8A745 EXPRESSION TAG SEQRES 1 A 180 GLY PRO MET GLU ASN PHE SER GLU LEU ILE LYS ASN ARG SEQRES 2 A 180 ARG SER MET ARG LYS PHE THR ASP GLU GLU LEU THR GLN SEQRES 3 A 180 ASP GLU VAL VAL ALA LEU MET LYS ALA ALA LEU MET SER SEQRES 4 A 180 PRO SER SER LYS ARG SER ASN SER TRP GLN PHE VAL VAL SEQRES 5 A 180 VAL ASP ASP LYS GLU LYS LEU LYS GLU LEU SER HIS CYS SEQRES 6 A 180 LYS GLU GLN ALA SER SER PHE ILE ALA ASP ALA ALA LEU SEQRES 7 A 180 ALA ILE VAL VAL MET ALA ASP PRO LEU ALA SER ASP VAL SEQRES 8 A 180 TRP ILE GLU ASP ALA SER ILE ALA SER ILE MET ILE GLN SEQRES 9 A 180 LEU GLN ALA GLU ASP LEU GLY LEU GLY SER CYS TRP VAL SEQRES 10 A 180 GLN VAL ARG GLU ARG PHE THR ALA THR GLY MET PRO SER SEQRES 11 A 180 ASP GLU PHE VAL HIS GLY ILE LEU ASP ILE PRO LEU GLN SEQRES 12 A 180 LEU GLN ILE LEU SER VAL ILE ALA ILE GLY HIS LYS GLY SEQRES 13 A 180 MET GLU ARG LYS PRO PHE ASN GLU GLU HIS LEU GLN TRP SEQRES 14 A 180 GLU LYS ILE HIS ILE ASN LYS PHE GLY GLY LYS SEQRES 1 B 180 GLY PRO MET GLU ASN PHE SER GLU LEU ILE LYS ASN ARG SEQRES 2 B 180 ARG SER MET ARG LYS PHE THR ASP GLU GLU LEU THR GLN SEQRES 3 B 180 ASP GLU VAL VAL ALA LEU MET LYS ALA ALA LEU MET SER SEQRES 4 B 180 PRO SER SER LYS ARG SER ASN SER TRP GLN PHE VAL VAL SEQRES 5 B 180 VAL ASP ASP LYS GLU LYS LEU LYS GLU LEU SER HIS CYS SEQRES 6 B 180 LYS GLU GLN ALA SER SER PHE ILE ALA ASP ALA ALA LEU SEQRES 7 B 180 ALA ILE VAL VAL MET ALA ASP PRO LEU ALA SER ASP VAL SEQRES 8 B 180 TRP ILE GLU ASP ALA SER ILE ALA SER ILE MET ILE GLN SEQRES 9 B 180 LEU GLN ALA GLU ASP LEU GLY LEU GLY SER CYS TRP VAL SEQRES 10 B 180 GLN VAL ARG GLU ARG PHE THR ALA THR GLY MET PRO SER SEQRES 11 B 180 ASP GLU PHE VAL HIS GLY ILE LEU ASP ILE PRO LEU GLN SEQRES 12 B 180 LEU GLN ILE LEU SER VAL ILE ALA ILE GLY HIS LYS GLY SEQRES 13 B 180 MET GLU ARG LYS PRO PHE ASN GLU GLU HIS LEU GLN TRP SEQRES 14 B 180 GLU LYS ILE HIS ILE ASN LYS PHE GLY GLY LYS HET CIT A 201 18 HET TBU B 201 15 HETNAM CIT CITRIC ACID HETNAM TBU TERTIARY-BUTYL ALCOHOL HETSYN TBU 2-METHYL-2-PROPANOL FORMUL 3 CIT C6 H8 O7 FORMUL 4 TBU C4 H10 O FORMUL 5 HOH *125(H2 O) HELIX 1 AA1 ASN A 5 ARG A 13 1 9 HELIX 2 AA2 THR A 25 MET A 38 1 14 HELIX 3 AA3 SER A 41 SER A 45 5 5 HELIX 4 AA4 ASP A 55 SER A 63 1 9 HELIX 5 AA5 SER A 70 ALA A 76 5 7 HELIX 6 AA6 VAL A 91 LEU A 110 1 20 HELIX 7 AA7 PRO A 129 ASP A 139 1 11 HELIX 8 AA8 ASN A 163 LEU A 167 5 5 HELIX 9 AA9 GLN A 168 GLU A 170 5 3 HELIX 10 AB1 THR B 25 MET B 38 1 14 HELIX 11 AB2 SER B 41 SER B 45 5 5 HELIX 12 AB3 ASP B 55 SER B 63 1 9 HELIX 13 AB4 HIS B 64 LYS B 66 5 3 HELIX 14 AB5 SER B 70 ASP B 75 1 6 HELIX 15 AB6 VAL B 91 LEU B 110 1 20 HELIX 16 AB7 PRO B 129 ASP B 139 1 11 HELIX 17 AB8 GLN B 168 GLU B 170 5 3 SHEET 1 AA1 5 GLY A 113 GLN A 118 0 SHEET 2 AA1 5 GLN A 145 GLY A 153 -1 O GLY A 153 N GLY A 113 SHEET 3 AA1 5 LEU A 78 ALA A 84 -1 N ALA A 84 O GLN A 145 SHEET 4 AA1 5 TRP A 48 VAL A 53 -1 N VAL A 53 O ALA A 79 SHEET 5 AA1 5 ILE B 172 ILE B 174 1 O HIS B 173 N VAL A 52 SHEET 1 AA2 5 ILE A 172 ILE A 174 0 SHEET 2 AA2 5 TRP B 48 VAL B 53 1 O VAL B 52 N HIS A 173 SHEET 3 AA2 5 LEU B 78 ALA B 84 -1 O ALA B 79 N VAL B 53 SHEET 4 AA2 5 GLN B 145 GLY B 153 -1 O ILE B 152 N LEU B 78 SHEET 5 AA2 5 GLY B 113 GLN B 118 -1 N GLY B 113 O GLY B 153 CRYST1 46.009 69.426 47.790 90.00 98.73 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021735 0.000000 0.003339 0.00000 SCALE2 0.000000 0.014404 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021170 0.00000