HEADER CYTOKINE 07-MAR-23 8CR5 TITLE MURINE INTERLEUKIN-12 RECEPTOR BETA 1 DOMAIN 1 IN COMPLEX WITH MURINE TITLE 2 INTERLEUKIN-12 BETA. COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-12 SUBUNIT BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IL-12B,CYTOTOXIC LYMPHOCYTE MATURATION FACTOR 40 KDA COMPND 5 SUBUNIT,CLMF P40,IL-12 SUBUNIT P40; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: RESIDUES [M1-A22] ENCODE THE SIGNAL PEPTIDE WHICH IS COMPND 9 MOST LIKELY REMOVED DURING TRANSLATION/FOLDING. RESIDUES [G336-H343] COMPND 10 ENCODE FOR CLONING SCAR AND PURIFICATION TAG.; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: INTERLEUKIN-12 RECEPTOR SUBUNIT BETA-1; COMPND 13 CHAIN: B; COMPND 14 SYNONYM: IL-12 RECEPTOR SUBUNIT BETA-1,IL-12R SUBUNIT BETA-1,IL-12R- COMPND 15 BETA-1,IL-12 RECEPTOR BETA COMPONENT; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: RESIDUES [M1-C19] ENCODE THE SIGNAL PEPTIDE WHICH IS COMPND 18 MOST LIKELY REMOVED DURING TRANSLATION/FOLDING. RESIDUES [G259-H266] COMPND 19 ENCODE A CLONING SCAR AND PURIFICATION TAG. SERENDIPITOUS IN-DROP COMPND 20 PROTEOLYSIS REMOVED THE C-TERMINAL HALF OF THE PROTEIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: IL12B; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S MGAT1-/-; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: IL12RB1, IL12RB; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293S MGAT1-/-; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS COMPLEX, INFLAMMATION, GLYCOPROTEIN, IMMUNITY, CYTOKINE EXPDTA X-RAY DIFFRACTION AUTHOR R.MERCERON,Y.BLOCH,J.FELIX,S.N.SAVVIDES REVDAT 2 01-MAY-24 8CR5 1 JRNL REVDAT 1 07-FEB-24 8CR5 0 JRNL AUTH Y.BLOCH,J.FELIX,R.MERCERON,M.PROVOST,R.A.SYMAKANI, JRNL AUTH 2 R.DE BACKER,E.LAMBERT,A.R.MEHDIPOUR,S.N.SAVVIDES JRNL TITL STRUCTURES OF COMPLETE EXTRACELLULAR RECEPTOR ASSEMBLIES JRNL TITL 2 MEDIATED BY IL-12 AND IL-23. JRNL REF NAT.STRUCT.MOL.BIOL. V. 31 591 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 38287195 JRNL DOI 10.1038/S41594-023-01190-6 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 26468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4800 - 4.4700 0.99 2837 150 0.1923 0.2420 REMARK 3 2 4.4700 - 3.5500 1.00 2806 147 0.1823 0.2136 REMARK 3 3 3.5500 - 3.1000 0.99 2777 147 0.2440 0.2933 REMARK 3 4 3.1000 - 2.8200 0.99 2784 146 0.2818 0.3222 REMARK 3 5 2.8200 - 2.6200 0.99 2767 146 0.3083 0.3435 REMARK 3 6 2.6200 - 2.4600 0.99 2781 146 0.3051 0.3585 REMARK 3 7 2.4600 - 2.3400 1.00 2832 149 0.3162 0.3705 REMARK 3 8 2.3400 - 2.2400 0.99 2753 145 0.3518 0.3496 REMARK 3 9 2.2400 - 2.1500 0.99 2807 148 0.3779 0.4100 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.338 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.746 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3334 REMARK 3 ANGLE : 0.654 4543 REMARK 3 CHIRALITY : 0.045 513 REMARK 3 PLANARITY : 0.004 574 REMARK 3 DIHEDRAL : 15.542 1195 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6545 -35.6773 16.8432 REMARK 3 T TENSOR REMARK 3 T11: 0.4050 T22: 0.3679 REMARK 3 T33: 0.4158 T12: 0.0343 REMARK 3 T13: 0.0306 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 2.0391 L22: 3.1102 REMARK 3 L33: 1.3853 L12: 1.0140 REMARK 3 L13: 0.3880 L23: 1.1070 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: -0.1604 S13: 0.3716 REMARK 3 S21: 0.0513 S22: 0.0400 S23: -0.0706 REMARK 3 S31: -0.3093 S32: -0.0707 S33: 0.0011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0331 -69.9195 20.2021 REMARK 3 T TENSOR REMARK 3 T11: 0.2856 T22: 0.3125 REMARK 3 T33: 0.3489 T12: -0.0223 REMARK 3 T13: -0.0295 T23: -0.0487 REMARK 3 L TENSOR REMARK 3 L11: 3.5148 L22: 2.8395 REMARK 3 L33: 0.9559 L12: 0.3545 REMARK 3 L13: -0.6246 L23: -0.0188 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: -0.0369 S13: -0.5780 REMARK 3 S21: 0.1488 S22: -0.0644 S23: -0.1274 REMARK 3 S31: 0.2476 S32: -0.0787 S33: -0.0024 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CR5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292128005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.008 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26490 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 165.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.558 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.69 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (BCS E4) 20% PEG SMEAR MEDIUM, 0.1M REMARK 280 MGCL2, 0.1 M KCL, 0.1M PIPES PH 7.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 82.54500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 CYS A 2 REMARK 465 PRO A 3 REMARK 465 GLN A 4 REMARK 465 LYS A 5 REMARK 465 LEU A 6 REMARK 465 THR A 7 REMARK 465 ILE A 8 REMARK 465 SER A 9 REMARK 465 TRP A 10 REMARK 465 PHE A 11 REMARK 465 ALA A 12 REMARK 465 ILE A 13 REMARK 465 VAL A 14 REMARK 465 LEU A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 SER A 18 REMARK 465 PRO A 19 REMARK 465 LEU A 20 REMARK 465 MET A 21 REMARK 465 ALA A 22 REMARK 465 SER A 157 REMARK 465 SER A 158 REMARK 465 SER A 159 REMARK 465 PRO A 160 REMARK 465 ASN A 246 REMARK 465 SER A 247 REMARK 465 ARG A 276 REMARK 465 LYS A 277 REMARK 465 LYS A 278 REMARK 465 GLU A 279 REMARK 465 LYS A 280 REMARK 465 MET A 281 REMARK 465 LYS A 282 REMARK 465 GLU A 283 REMARK 465 THR A 284 REMARK 465 GLU A 285 REMARK 465 GLU A 286 REMARK 465 ARG A 332 REMARK 465 VAL A 333 REMARK 465 ARG A 334 REMARK 465 SER A 335 REMARK 465 GLY A 336 REMARK 465 THR A 337 REMARK 465 LYS A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 MET B 3 REMARK 465 GLY B 4 REMARK 465 VAL B 5 REMARK 465 LYS B 6 REMARK 465 VAL B 7 REMARK 465 LEU B 8 REMARK 465 PHE B 9 REMARK 465 ALA B 10 REMARK 465 LEU B 11 REMARK 465 ILE B 12 REMARK 465 CYS B 13 REMARK 465 ILE B 14 REMARK 465 ALA B 15 REMARK 465 VAL B 16 REMARK 465 ALA B 17 REMARK 465 GLU B 18 REMARK 465 ALA B 19 REMARK 465 GLN B 20 REMARK 465 LEU B 21 REMARK 465 GLY B 22 REMARK 465 ALA B 23 REMARK 465 SER B 24 REMARK 465 GLY B 25 REMARK 465 PRO B 26 REMARK 465 GLY B 27 REMARK 465 ASP B 28 REMARK 465 GLY B 29 REMARK 465 CYS B 30 REMARK 465 CYS B 31 REMARK 465 VAL B 32 REMARK 465 GLU B 33 REMARK 465 LYS B 34 REMARK 465 THR B 35 REMARK 465 SER B 36 REMARK 465 PHE B 37 REMARK 465 PRO B 38 REMARK 465 GLU B 39 REMARK 465 GLY B 40 REMARK 465 ALA B 41 REMARK 465 SER B 42 REMARK 465 GLY B 43 REMARK 465 SER B 44 REMARK 465 PRO B 45 REMARK 465 SER B 160 REMARK 465 HIS B 161 REMARK 465 ARG B 162 REMARK 465 GLN B 163 REMARK 465 LEU B 164 REMARK 465 ARG B 165 REMARK 465 MET B 166 REMARK 465 ASP B 167 REMARK 465 TRP B 168 REMARK 465 ASN B 169 REMARK 465 VAL B 170 REMARK 465 SER B 171 REMARK 465 GLU B 172 REMARK 465 GLU B 173 REMARK 465 ALA B 174 REMARK 465 GLY B 175 REMARK 465 ALA B 176 REMARK 465 GLU B 177 REMARK 465 VAL B 178 REMARK 465 GLN B 179 REMARK 465 PHE B 180 REMARK 465 ARG B 181 REMARK 465 ARG B 182 REMARK 465 ARG B 183 REMARK 465 MET B 184 REMARK 465 PRO B 185 REMARK 465 THR B 186 REMARK 465 THR B 187 REMARK 465 ASN B 188 REMARK 465 TRP B 189 REMARK 465 THR B 190 REMARK 465 LEU B 191 REMARK 465 GLY B 192 REMARK 465 ASP B 193 REMARK 465 CYS B 194 REMARK 465 GLY B 195 REMARK 465 PRO B 196 REMARK 465 GLN B 197 REMARK 465 VAL B 198 REMARK 465 ASN B 199 REMARK 465 SER B 200 REMARK 465 GLY B 201 REMARK 465 SER B 202 REMARK 465 GLY B 203 REMARK 465 VAL B 204 REMARK 465 LEU B 205 REMARK 465 GLY B 206 REMARK 465 ASP B 207 REMARK 465 ILE B 208 REMARK 465 ARG B 209 REMARK 465 GLY B 210 REMARK 465 SER B 211 REMARK 465 MET B 212 REMARK 465 SER B 213 REMARK 465 GLU B 214 REMARK 465 SER B 215 REMARK 465 CYS B 216 REMARK 465 LEU B 217 REMARK 465 CYS B 218 REMARK 465 PRO B 219 REMARK 465 SER B 220 REMARK 465 GLU B 221 REMARK 465 ASN B 222 REMARK 465 MET B 223 REMARK 465 ALA B 224 REMARK 465 GLN B 225 REMARK 465 GLU B 226 REMARK 465 ILE B 227 REMARK 465 GLN B 228 REMARK 465 ILE B 229 REMARK 465 ARG B 230 REMARK 465 ARG B 231 REMARK 465 ARG B 232 REMARK 465 ARG B 233 REMARK 465 ARG B 234 REMARK 465 LEU B 235 REMARK 465 SER B 236 REMARK 465 SER B 237 REMARK 465 GLY B 238 REMARK 465 ALA B 239 REMARK 465 PRO B 240 REMARK 465 GLY B 241 REMARK 465 GLY B 242 REMARK 465 PRO B 243 REMARK 465 TRP B 244 REMARK 465 SER B 245 REMARK 465 ASP B 246 REMARK 465 TRP B 247 REMARK 465 SER B 248 REMARK 465 MET B 249 REMARK 465 PRO B 250 REMARK 465 VAL B 251 REMARK 465 CYS B 252 REMARK 465 VAL B 253 REMARK 465 PRO B 254 REMARK 465 PRO B 255 REMARK 465 GLU B 256 REMARK 465 VAL B 257 REMARK 465 LEU B 258 REMARK 465 GLY B 259 REMARK 465 THR B 260 REMARK 465 LYS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 465 HIS B 266 REMARK 465 HIS B 267 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 ASP A 56 CG OD1 OD2 REMARK 470 HIS A 66 ND1 CD2 CE1 NE2 REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 123 CD CE NZ REMARK 470 ARG A 136 CZ NH1 NH2 REMARK 470 LYS A 154 CE NZ REMARK 470 GLN A 181 CG CD OE1 NE2 REMARK 470 LYS A 237 NZ REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 GLN A 248 CG CD OE1 NE2 REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 ARG A 273 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 275 CG CD OE1 NE2 REMARK 470 ASN A 289 CG OD1 ND2 REMARK 470 GLN A 290 CG CD OE1 NE2 REMARK 470 LYS A 291 CG CD CE NZ REMARK 470 LYS A 298 CG CD CE NZ REMARK 470 GLU A 302 CG CD OE1 OE2 REMARK 470 GLN A 304 CG CD OE1 NE2 REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 LYS A 325 CG CD CE NZ REMARK 470 LEU B 46 CG CD1 CD2 REMARK 470 ASP B 72 CG OD1 OD2 REMARK 470 HIS B 89 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 127 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 159 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 438 O HOH A 454 2.08 REMARK 500 O HOH A 405 O HOH A 466 2.09 REMARK 500 OE1 GLN A 215 O HOH A 401 2.11 REMARK 500 O HOH B 411 O HOH B 427 2.13 REMARK 500 OE1 GLU A 108 O HOH A 402 2.14 REMARK 500 O HOH A 443 O HOH A 471 2.16 REMARK 500 O ARG B 55 O HOH B 401 2.18 REMARK 500 O ASP A 40 O HOH A 403 2.19 REMARK 500 O HOH A 432 O HOH A 453 2.19 REMARK 500 OG SER A 113 O HOH A 404 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 27 -165.19 -129.66 REMARK 500 ASP A 194 -75.44 -69.30 REMARK 500 SER A 197 83.42 -163.84 REMARK 500 GLN A 215 -102.70 55.68 REMARK 500 ASN A 238 84.72 56.87 REMARK 500 LYS A 242 106.33 -163.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 8CR5 A 1 335 UNP P43432 IL12B_MOUSE 1 335 DBREF 8CR5 B 20 258 UNP Q60837 I12R1_MOUSE 20 258 SEQADV 8CR5 SER A 197 UNP P43432 CYS 197 ENGINEERED MUTATION SEQADV 8CR5 GLY A 336 UNP P43432 EXPRESSION TAG SEQADV 8CR5 THR A 337 UNP P43432 EXPRESSION TAG SEQADV 8CR5 LYS A 338 UNP P43432 EXPRESSION TAG SEQADV 8CR5 HIS A 339 UNP P43432 EXPRESSION TAG SEQADV 8CR5 HIS A 340 UNP P43432 EXPRESSION TAG SEQADV 8CR5 HIS A 341 UNP P43432 EXPRESSION TAG SEQADV 8CR5 HIS A 342 UNP P43432 EXPRESSION TAG SEQADV 8CR5 HIS A 343 UNP P43432 EXPRESSION TAG SEQADV 8CR5 HIS A 344 UNP P43432 EXPRESSION TAG SEQADV 8CR5 MET B 3 UNP Q60837 INITIATING METHIONINE SEQADV 8CR5 GLY B 4 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 VAL B 5 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 LYS B 6 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 VAL B 7 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 LEU B 8 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 PHE B 9 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 ALA B 10 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 LEU B 11 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 ILE B 12 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 CYS B 13 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 ILE B 14 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 ALA B 15 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 VAL B 16 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 ALA B 17 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 GLU B 18 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 ALA B 19 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 GLY B 259 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 THR B 260 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 LYS B 261 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 HIS B 262 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 HIS B 263 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 HIS B 264 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 HIS B 265 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 HIS B 266 UNP Q60837 EXPRESSION TAG SEQADV 8CR5 HIS B 267 UNP Q60837 EXPRESSION TAG SEQRES 1 A 344 MET CYS PRO GLN LYS LEU THR ILE SER TRP PHE ALA ILE SEQRES 2 A 344 VAL LEU LEU VAL SER PRO LEU MET ALA MET TRP GLU LEU SEQRES 3 A 344 GLU LYS ASP VAL TYR VAL VAL GLU VAL ASP TRP THR PRO SEQRES 4 A 344 ASP ALA PRO GLY GLU THR VAL ASN LEU THR CYS ASP THR SEQRES 5 A 344 PRO GLU GLU ASP ASP ILE THR TRP THR SER ASP GLN ARG SEQRES 6 A 344 HIS GLY VAL ILE GLY SER GLY LYS THR LEU THR ILE THR SEQRES 7 A 344 VAL LYS GLU PHE LEU ASP ALA GLY GLN TYR THR CYS HIS SEQRES 8 A 344 LYS GLY GLY GLU THR LEU SER HIS SER HIS LEU LEU LEU SEQRES 9 A 344 HIS LYS LYS GLU ASN GLY ILE TRP SER THR GLU ILE LEU SEQRES 10 A 344 LYS ASN PHE LYS ASN LYS THR PHE LEU LYS CYS GLU ALA SEQRES 11 A 344 PRO ASN TYR SER GLY ARG PHE THR CYS SER TRP LEU VAL SEQRES 12 A 344 GLN ARG ASN MET ASP LEU LYS PHE ASN ILE LYS SER SER SEQRES 13 A 344 SER SER SER PRO ASP SER ARG ALA VAL THR CYS GLY MET SEQRES 14 A 344 ALA SER LEU SER ALA GLU LYS VAL THR LEU ASP GLN ARG SEQRES 15 A 344 ASP TYR GLU LYS TYR SER VAL SER CYS GLN GLU ASP VAL SEQRES 16 A 344 THR SER PRO THR ALA GLU GLU THR LEU PRO ILE GLU LEU SEQRES 17 A 344 ALA LEU GLU ALA ARG GLN GLN ASN LYS TYR GLU ASN TYR SEQRES 18 A 344 SER THR SER PHE PHE ILE ARG ASP ILE ILE LYS PRO ASP SEQRES 19 A 344 PRO PRO LYS ASN LEU GLN MET LYS PRO LEU LYS ASN SER SEQRES 20 A 344 GLN VAL GLU VAL SER TRP GLU TYR PRO ASP SER TRP SER SEQRES 21 A 344 THR PRO HIS SER TYR PHE SER LEU LYS PHE PHE VAL ARG SEQRES 22 A 344 ILE GLN ARG LYS LYS GLU LYS MET LYS GLU THR GLU GLU SEQRES 23 A 344 GLY CYS ASN GLN LYS GLY ALA PHE LEU VAL GLU LYS THR SEQRES 24 A 344 SER THR GLU VAL GLN CYS LYS GLY GLY ASN VAL CYS VAL SEQRES 25 A 344 GLN ALA GLN ASP ARG TYR TYR ASN SER SER CYS SER LYS SEQRES 26 A 344 TRP ALA CYS VAL PRO CYS ARG VAL ARG SER GLY THR LYS SEQRES 27 A 344 HIS HIS HIS HIS HIS HIS SEQRES 1 B 265 MET GLY VAL LYS VAL LEU PHE ALA LEU ILE CYS ILE ALA SEQRES 2 B 265 VAL ALA GLU ALA GLN LEU GLY ALA SER GLY PRO GLY ASP SEQRES 3 B 265 GLY CYS CYS VAL GLU LYS THR SER PHE PRO GLU GLY ALA SEQRES 4 B 265 SER GLY SER PRO LEU GLY PRO ARG ASN LEU SER CYS TYR SEQRES 5 B 265 ARG VAL SER LYS THR ASP TYR GLU CYS SER TRP GLN TYR SEQRES 6 B 265 ASP GLY PRO GLU ASP ASN VAL SER HIS VAL LEU TRP CYS SEQRES 7 B 265 CYS PHE VAL PRO PRO ASN HIS THR HIS THR GLY GLN GLU SEQRES 8 B 265 ARG CYS ARG TYR PHE SER SER GLY PRO ASP ARG THR VAL SEQRES 9 B 265 GLN PHE TRP GLU GLN ASP GLY ILE PRO VAL LEU SER LYS SEQRES 10 B 265 VAL ASN PHE TRP VAL GLU SER ARG LEU GLY ASN ARG THR SEQRES 11 B 265 MET LYS SER GLN LYS ILE SER GLN TYR LEU TYR ASN TRP SEQRES 12 B 265 THR LYS THR THR PRO PRO LEU GLY HIS ILE LYS VAL SER SEQRES 13 B 265 GLN SER HIS ARG GLN LEU ARG MET ASP TRP ASN VAL SER SEQRES 14 B 265 GLU GLU ALA GLY ALA GLU VAL GLN PHE ARG ARG ARG MET SEQRES 15 B 265 PRO THR THR ASN TRP THR LEU GLY ASP CYS GLY PRO GLN SEQRES 16 B 265 VAL ASN SER GLY SER GLY VAL LEU GLY ASP ILE ARG GLY SEQRES 17 B 265 SER MET SER GLU SER CYS LEU CYS PRO SER GLU ASN MET SEQRES 18 B 265 ALA GLN GLU ILE GLN ILE ARG ARG ARG ARG ARG LEU SER SEQRES 19 B 265 SER GLY ALA PRO GLY GLY PRO TRP SER ASP TRP SER MET SEQRES 20 B 265 PRO VAL CYS VAL PRO PRO GLU VAL LEU GLY THR LYS HIS SEQRES 21 B 265 HIS HIS HIS HIS HIS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG B 301 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 3(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 5 HOH *113(H2 O) HELIX 1 AA1 GLU A 81 ALA A 85 5 5 HELIX 2 AA2 MET A 169 LEU A 172 5 4 HELIX 3 AA3 PHE A 226 ILE A 231 1 6 SHEET 1 AA1 6 TRP A 24 GLU A 27 0 SHEET 2 AA1 6 VAL A 30 ASP A 36 -1 O VAL A 32 N TRP A 24 SHEET 3 AA1 6 GLU A 95 GLU A 108 1 O LEU A 103 N VAL A 33 SHEET 4 AA1 6 GLY A 86 LYS A 92 -1 N CYS A 90 O LEU A 97 SHEET 5 AA1 6 THR A 59 SER A 62 -1 N THR A 59 O HIS A 91 SHEET 6 AA1 6 GLY A 70 SER A 71 -1 O GLY A 70 N TRP A 60 SHEET 1 AA2 4 TRP A 24 GLU A 27 0 SHEET 2 AA2 4 VAL A 30 ASP A 36 -1 O VAL A 32 N TRP A 24 SHEET 3 AA2 4 GLU A 95 GLU A 108 1 O LEU A 103 N VAL A 33 SHEET 4 AA2 4 ILE A 111 TRP A 112 -1 O ILE A 111 N GLU A 108 SHEET 1 AA3 2 GLU A 44 THR A 49 0 SHEET 2 AA3 2 THR A 74 VAL A 79 -1 O ILE A 77 N VAL A 46 SHEET 1 AA4 4 LEU A 117 LYS A 118 0 SHEET 2 AA4 4 ARG A 136 VAL A 143 -1 O LEU A 142 N LYS A 118 SHEET 3 AA4 4 ARG A 182 GLU A 193 -1 O CYS A 191 N PHE A 137 SHEET 4 AA4 4 VAL A 165 CYS A 167 -1 N THR A 166 O GLN A 192 SHEET 1 AA5 4 LYS A 127 GLU A 129 0 SHEET 2 AA5 4 ARG A 136 VAL A 143 -1 O THR A 138 N GLU A 129 SHEET 3 AA5 4 ARG A 182 GLU A 193 -1 O CYS A 191 N PHE A 137 SHEET 4 AA5 4 SER A 173 LEU A 179 -1 N VAL A 177 O TYR A 184 SHEET 1 AA6 3 LEU A 149 SER A 155 0 SHEET 2 AA6 3 ILE A 206 GLN A 214 -1 O GLU A 211 N ASN A 152 SHEET 3 AA6 3 LYS A 217 PHE A 225 -1 O GLU A 219 N ALA A 212 SHEET 1 AA7 2 VAL A 249 GLU A 250 0 SHEET 2 AA7 2 GLU A 302 VAL A 303 -1 O VAL A 303 N VAL A 249 SHEET 1 AA8 4 PHE A 294 VAL A 296 0 SHEET 2 AA8 4 LEU A 268 GLN A 275 -1 N PHE A 270 O VAL A 296 SHEET 3 AA8 4 ASN A 309 ASP A 316 -1 O CYS A 311 N ARG A 273 SHEET 4 AA8 4 ALA A 327 PRO A 330 -1 O ALA A 327 N VAL A 312 SHEET 1 AA9 3 GLY B 47 ARG B 55 0 SHEET 2 AA9 3 ASP B 60 ASP B 68 -1 O GLN B 66 N ARG B 49 SHEET 3 AA9 3 THR B 105 TRP B 109 -1 O PHE B 108 N TYR B 61 SHEET 1 AB1 4 ARG B 94 GLY B 101 0 SHEET 2 AB1 4 VAL B 74 PHE B 82 -1 N PHE B 82 O ARG B 94 SHEET 3 AB1 4 VAL B 120 LEU B 128 -1 O ARG B 127 N SER B 75 SHEET 4 AB1 4 ARG B 131 LYS B 134 -1 O MET B 133 N SER B 126 SHEET 1 AB2 4 ARG B 94 GLY B 101 0 SHEET 2 AB2 4 VAL B 74 PHE B 82 -1 N PHE B 82 O ARG B 94 SHEET 3 AB2 4 VAL B 120 LEU B 128 -1 O ARG B 127 N SER B 75 SHEET 4 AB2 4 ILE B 138 GLN B 140 -1 O ILE B 138 N PHE B 122 SSBOND 1 CYS A 50 CYS A 90 1555 1555 2.03 SSBOND 2 CYS A 128 CYS A 139 1555 1555 2.03 SSBOND 3 CYS A 167 CYS A 191 1555 1555 2.03 SSBOND 4 CYS A 288 CYS A 323 1555 1555 2.01 SSBOND 5 CYS A 305 CYS A 331 1555 1555 2.03 SSBOND 6 CYS A 311 CYS A 328 1555 1555 2.03 SSBOND 7 CYS B 53 CYS B 63 1555 1555 2.03 SSBOND 8 CYS B 81 CYS B 95 1555 1555 2.03 LINK ND2 ASN A 220 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 144 C1 NAG B 301 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 CISPEP 1 THR A 261 PRO A 262 0 1.98 CRYST1 29.220 165.090 51.870 90.00 90.44 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034223 0.000000 0.000260 0.00000 SCALE2 0.000000 0.006057 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019280 0.00000