data_8CRY # _entry.id 8CRY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8CRY pdb_00008cry 10.2210/pdb8cry/pdb WWPDB D_1000265342 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-05-17 2 'Structure model' 1 1 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8CRY _pdbx_database_status.recvd_initial_deposition_date 2022-05-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email mgeorgia@iu.edu _pdbx_contact_author.name_first Millie _pdbx_contact_author.name_last Georgiadis _pdbx_contact_author.name_mi M. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2976-4576 # _audit_author.name 'Georgiadis, M.M.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0003-2976-4576 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Alien DNA visualized at high resolution in A- and B-forms' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Georgiadis, M.M.' 1 0000-0003-2976-4576 primary 'Hoshika, S.' 2 ? primary 'Shukla, M.' 3 ? primary 'Benner, S.A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*TP*(JSP)P*(1W5)P*(1W5)P*(1WA)P*(IGU)P*(JSP)P*(IGU)P*(JSP)P*(1W5)P*(1WA)P*(1WA)P*(IGU)P*AP*G)-3') ; 5081.315 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 165 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DT)(JSP)(1W5)(1W5)(1WA)(IGU)(JSP)(IGU)(JSP)(1W5)(1WA)(1WA)(IGU)(DA)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CTXXXXGXGXXXXGAG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 JSP n 1 4 1W5 n 1 5 1W5 n 1 6 1WA n 1 7 IGU n 1 8 JSP n 1 9 IGU n 1 10 JSP n 1 11 1W5 n 1 12 1WA n 1 13 1WA n 1 14 IGU n 1 15 DA n 1 16 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 16 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1W5 'DNA linking' . '(1R)-1-(6-amino-2-hydroxy-5-nitropyridin-3-yl)-1,4-anhydro-2-deoxy-5-O-phosphono-D-erythro-pentitol' ? 'C10 H14 N3 O9 P' 351.207 1WA 'DNA linking' . '2-amino-8-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-4-hydroxy-1H-imidazo[1,2-a][1,3,5]triazine-5,8-diium' ? 'C10 H16 N5 O7 P 2' 349.237 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 IGU 'DNA linking' n "2'-DEOXYISOGUANINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 JSP 'DNA linking' . '(1R)-1-(4-amino-1-methyl-2-oxo-1,2-dihydropyrimidin-5-yl)-1,4-anhydro-2-deoxy-5-O-phosphono-D-erythro-pentitol' ? 'C10 H16 N3 O7 P' 321.224 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 JSP 3 3 3 JSP JSP A . n A 1 4 1W5 4 4 4 1W5 1W5 A . n A 1 5 1W5 5 5 5 1W5 1W5 A . n A 1 6 1WA 6 6 6 1WA 1WA A . n A 1 7 IGU 7 7 7 IGU IGU A . n A 1 8 JSP 8 8 8 JSP JSP A . n A 1 9 IGU 9 9 9 IGU IGU A . n A 1 10 JSP 10 10 10 JSP JSP A . n A 1 11 1W5 11 11 11 1W5 1W5 A . n A 1 12 1WA 12 12 12 1WA 1WA A . n A 1 13 1WA 13 13 13 1WA 1WA A . n A 1 14 IGU 14 14 14 IGU IGU A . n A 1 15 DA 15 15 15 DA DA A . n A 1 16 DG 16 16 16 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DT 2 2 2 DT DT B . n B 1 3 JSP 3 3 3 JSP JSP B . n B 1 4 1W5 4 4 4 1W5 1W5 B . n B 1 5 1W5 5 5 5 1W5 1W5 B . n B 1 6 1WA 6 6 6 1WA 1WA B . n B 1 7 IGU 7 7 7 IGU IGU B . n B 1 8 JSP 8 8 8 JSP JSP B . n B 1 9 IGU 9 9 9 IGU IGU B . n B 1 10 JSP 10 10 10 JSP JSP B . n B 1 11 1W5 11 11 11 1W5 1W5 B . n B 1 12 1WA 12 12 12 1WA 1WA B . n B 1 13 1WA 13 13 13 1WA 1WA B . n B 1 14 IGU 14 14 14 IGU IGU B . n B 1 15 DA 15 15 15 DA DA B . n B 1 16 DG 16 16 16 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 101 1 MG MG B . D 3 HOH 1 101 109 HOH HOH A . D 3 HOH 2 102 65 HOH HOH A . D 3 HOH 3 103 144 HOH HOH A . D 3 HOH 4 104 61 HOH HOH A . D 3 HOH 5 105 130 HOH HOH A . D 3 HOH 6 106 72 HOH HOH A . D 3 HOH 7 107 172 HOH HOH A . D 3 HOH 8 108 21 HOH HOH A . D 3 HOH 9 109 77 HOH HOH A . D 3 HOH 10 110 88 HOH HOH A . D 3 HOH 11 111 6 HOH HOH A . D 3 HOH 12 112 66 HOH HOH A . D 3 HOH 13 113 36 HOH HOH A . D 3 HOH 14 114 165 HOH HOH A . D 3 HOH 15 115 45 HOH HOH A . D 3 HOH 16 116 24 HOH HOH A . D 3 HOH 17 117 84 HOH HOH A . D 3 HOH 18 118 101 HOH HOH A . D 3 HOH 19 119 74 HOH HOH A . D 3 HOH 20 120 3 HOH HOH A . D 3 HOH 21 121 120 HOH HOH A . D 3 HOH 22 122 2 HOH HOH A . D 3 HOH 23 123 50 HOH HOH A . D 3 HOH 24 124 33 HOH HOH A . D 3 HOH 25 125 69 HOH HOH A . D 3 HOH 26 126 169 HOH HOH A . D 3 HOH 27 127 44 HOH HOH A . D 3 HOH 28 128 148 HOH HOH A . D 3 HOH 29 129 162 HOH HOH A . D 3 HOH 30 130 59 HOH HOH A . D 3 HOH 31 131 39 HOH HOH A . D 3 HOH 32 132 17 HOH HOH A . D 3 HOH 33 133 185 HOH HOH A . D 3 HOH 34 134 122 HOH HOH A . D 3 HOH 35 135 53 HOH HOH A . D 3 HOH 36 136 58 HOH HOH A . D 3 HOH 37 137 145 HOH HOH A . D 3 HOH 38 138 71 HOH HOH A . D 3 HOH 39 139 9 HOH HOH A . D 3 HOH 40 140 166 HOH HOH A . D 3 HOH 41 141 15 HOH HOH A . D 3 HOH 42 142 5 HOH HOH A . D 3 HOH 43 143 105 HOH HOH A . D 3 HOH 44 144 37 HOH HOH A . D 3 HOH 45 145 98 HOH HOH A . D 3 HOH 46 146 92 HOH HOH A . D 3 HOH 47 147 156 HOH HOH A . D 3 HOH 48 148 195 HOH HOH A . D 3 HOH 49 149 4 HOH HOH A . D 3 HOH 50 150 20 HOH HOH A . D 3 HOH 51 151 175 HOH HOH A . D 3 HOH 52 152 170 HOH HOH A . D 3 HOH 53 153 123 HOH HOH A . D 3 HOH 54 154 28 HOH HOH A . D 3 HOH 55 155 13 HOH HOH A . D 3 HOH 56 156 100 HOH HOH A . D 3 HOH 57 157 40 HOH HOH A . D 3 HOH 58 158 34 HOH HOH A . D 3 HOH 59 159 51 HOH HOH A . D 3 HOH 60 160 70 HOH HOH A . D 3 HOH 61 161 38 HOH HOH A . D 3 HOH 62 162 41 HOH HOH A . D 3 HOH 63 163 124 HOH HOH A . D 3 HOH 64 164 152 HOH HOH A . D 3 HOH 65 165 173 HOH HOH A . D 3 HOH 66 166 31 HOH HOH A . D 3 HOH 67 167 167 HOH HOH A . D 3 HOH 68 168 1 HOH HOH A . D 3 HOH 69 169 142 HOH HOH A . D 3 HOH 70 170 7 HOH HOH A . D 3 HOH 71 171 115 HOH HOH A . D 3 HOH 72 172 132 HOH HOH A . D 3 HOH 73 173 128 HOH HOH A . D 3 HOH 74 174 150 HOH HOH A . D 3 HOH 75 175 99 HOH HOH A . D 3 HOH 76 176 80 HOH HOH A . D 3 HOH 77 177 153 HOH HOH A . D 3 HOH 78 178 97 HOH HOH A . D 3 HOH 79 179 82 HOH HOH A . D 3 HOH 80 180 181 HOH HOH A . D 3 HOH 81 181 201 HOH HOH A . D 3 HOH 82 182 73 HOH HOH A . D 3 HOH 83 183 126 HOH HOH A . D 3 HOH 84 184 157 HOH HOH A . D 3 HOH 85 185 159 HOH HOH A . D 3 HOH 86 186 81 HOH HOH A . D 3 HOH 87 187 127 HOH HOH A . D 3 HOH 88 188 43 HOH HOH A . D 3 HOH 89 189 139 HOH HOH A . D 3 HOH 90 190 25 HOH HOH A . D 3 HOH 91 191 160 HOH HOH A . D 3 HOH 92 192 140 HOH HOH A . D 3 HOH 93 193 177 HOH HOH A . E 3 HOH 1 201 178 HOH HOH B . E 3 HOH 2 202 180 HOH HOH B . E 3 HOH 3 203 113 HOH HOH B . E 3 HOH 4 204 47 HOH HOH B . E 3 HOH 5 205 103 HOH HOH B . E 3 HOH 6 206 186 HOH HOH B . E 3 HOH 7 207 8 HOH HOH B . E 3 HOH 8 208 32 HOH HOH B . E 3 HOH 9 209 52 HOH HOH B . E 3 HOH 10 210 60 HOH HOH B . E 3 HOH 11 211 26 HOH HOH B . E 3 HOH 12 212 205 HOH HOH B . E 3 HOH 13 213 42 HOH HOH B . E 3 HOH 14 214 22 HOH HOH B . E 3 HOH 15 215 138 HOH HOH B . E 3 HOH 16 216 14 HOH HOH B . E 3 HOH 17 217 151 HOH HOH B . E 3 HOH 18 218 90 HOH HOH B . E 3 HOH 19 219 19 HOH HOH B . E 3 HOH 20 220 16 HOH HOH B . E 3 HOH 21 221 55 HOH HOH B . E 3 HOH 22 222 93 HOH HOH B . E 3 HOH 23 223 75 HOH HOH B . E 3 HOH 24 224 137 HOH HOH B . E 3 HOH 25 225 171 HOH HOH B . E 3 HOH 26 226 129 HOH HOH B . E 3 HOH 27 227 121 HOH HOH B . E 3 HOH 28 228 18 HOH HOH B . E 3 HOH 29 229 86 HOH HOH B . E 3 HOH 30 230 154 HOH HOH B . E 3 HOH 31 231 136 HOH HOH B . E 3 HOH 32 232 27 HOH HOH B . E 3 HOH 33 233 46 HOH HOH B . E 3 HOH 34 234 112 HOH HOH B . E 3 HOH 35 235 192 HOH HOH B . E 3 HOH 36 236 118 HOH HOH B . E 3 HOH 37 237 29 HOH HOH B . E 3 HOH 38 238 10 HOH HOH B . E 3 HOH 39 239 116 HOH HOH B . E 3 HOH 40 240 11 HOH HOH B . E 3 HOH 41 241 23 HOH HOH B . E 3 HOH 42 242 189 HOH HOH B . E 3 HOH 43 243 85 HOH HOH B . E 3 HOH 44 244 30 HOH HOH B . E 3 HOH 45 245 35 HOH HOH B . E 3 HOH 46 246 119 HOH HOH B . E 3 HOH 47 247 91 HOH HOH B . E 3 HOH 48 248 49 HOH HOH B . E 3 HOH 49 249 117 HOH HOH B . E 3 HOH 50 250 78 HOH HOH B . E 3 HOH 51 251 135 HOH HOH B . E 3 HOH 52 252 54 HOH HOH B . E 3 HOH 53 253 48 HOH HOH B . E 3 HOH 54 254 12 HOH HOH B . E 3 HOH 55 255 106 HOH HOH B . E 3 HOH 56 256 194 HOH HOH B . E 3 HOH 57 257 68 HOH HOH B . E 3 HOH 58 258 62 HOH HOH B . E 3 HOH 59 259 107 HOH HOH B . E 3 HOH 60 260 155 HOH HOH B . E 3 HOH 61 261 110 HOH HOH B . E 3 HOH 62 262 161 HOH HOH B . E 3 HOH 63 263 133 HOH HOH B . E 3 HOH 64 264 64 HOH HOH B . E 3 HOH 65 265 190 HOH HOH B . E 3 HOH 66 266 111 HOH HOH B . E 3 HOH 67 267 104 HOH HOH B . E 3 HOH 68 268 102 HOH HOH B . E 3 HOH 69 269 164 HOH HOH B . E 3 HOH 70 270 83 HOH HOH B . E 3 HOH 71 271 89 HOH HOH B . E 3 HOH 72 272 57 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8CRY _cell.details ? _cell.formula_units_Z ? _cell.length_a 41.052 _cell.length_a_esd ? _cell.length_b 45.799 _cell.length_b_esd ? _cell.length_c 50.550 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8CRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8CRY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05 M ADA, pH 6.5, 20% MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-07-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97933 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 16.980 _reflns.entry_id 8CRY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.200 _reflns.d_resolution_low 45.800 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 30144 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.000 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.800 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 58 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.072 _reflns.pdbx_Rpim_I_all 0.030 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 175100 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.200 1.220 ? ? 3993 ? ? ? 1318 89.700 ? ? ? ? 0.663 ? ? ? ? ? ? ? ? 3.000 ? ? ? 1.700 0.809 0.453 ? 1 1 0.587 ? ? ? ? ? ? ? ? ? ? 6.570 45.800 ? ? 1204 ? ? ? 228 98.400 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 5.300 ? ? ? 24.000 0.073 0.031 ? 2 1 0.990 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 37.150 _refine.B_iso_mean 19.8368 _refine.B_iso_min 12.550 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8CRY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.2000 _refine.ls_d_res_low 22.1290 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 30059 _refine.ls_number_reflns_R_free 1464 _refine.ls_number_reflns_R_work 28595 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.6300 _refine.ls_percent_reflns_R_free 4.8700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2153 _refine.ls_R_factor_R_free 0.2375 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2142 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.9400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.2000 _refine_hist.d_res_low 22.1290 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 840 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 32 _refine_hist.pdbx_B_iso_mean_ligand 15.27 _refine_hist.pdbx_B_iso_mean_solvent 27.78 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 674 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.2000 1.2429 . . 117 2655 92.0000 . . . 0.3369 0.0000 0.3150 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2429 1.2927 . . 141 2801 99.0000 . . . 0.2801 0.0000 0.2969 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.2927 1.3515 . . 167 2837 100.0000 . . . 0.2909 0.0000 0.2853 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.3515 1.4227 . . 147 2876 100.0000 . . . 0.2736 0.0000 0.2582 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4227 1.5118 . . 130 2863 100.0000 . . . 0.2425 0.0000 0.2416 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5118 1.6285 . . 143 2878 100.0000 . . . 0.2148 0.0000 0.2205 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6285 1.7924 . . 153 2852 99.0000 . . . 0.2452 0.0000 0.2111 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7924 2.0516 . . 158 2903 100.0000 . . . 0.2525 0.0000 0.2238 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0516 2.5841 . . 155 2908 100.0000 . . . 0.2222 0.0000 0.2351 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5841 22.1290 . . 153 3022 98.0000 . . . 0.2304 0.0000 0.1862 . . . . . . . . . . . # _struct.entry_id 8CRY _struct.title 'Crystal structure of alien DNA CTSZZPBSBSZPPBAG in an orthorhombic lattice' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8CRY _struct_keywords.text 'unnatural DNA, Alien DNA, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8CRY _struct_ref.pdbx_db_accession 8CRY _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8CRY A 1 ? 16 ? 8CRY 1 ? 16 ? 1 16 2 1 8CRY B 1 ? 16 ? 8CRY 1 ? 16 ? 1 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5370 ? 1 MORE 28 ? 1 'SSA (A^2)' 4990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DT 2 "O3'" ? ? ? 1_555 A JSP 3 P ? ? A DT 2 A JSP 3 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale2 covale one ? A JSP 3 "O3'" ? ? ? 1_555 A 1W5 4 P ? ? A JSP 3 A 1W5 4 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale3 covale one ? A 1W5 4 "O3'" ? ? ? 1_555 A 1W5 5 P ? ? A 1W5 4 A 1W5 5 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale4 covale one ? A 1W5 5 "O3'" ? ? ? 1_555 A 1WA 6 P ? ? A 1W5 5 A 1WA 6 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale5 covale both ? A 1WA 6 "O3'" ? ? ? 1_555 A IGU 7 P ? ? A 1WA 6 A IGU 7 1_555 ? ? ? ? ? ? ? 1.588 ? ? covale6 covale both ? A IGU 7 "O3'" ? ? ? 1_555 A JSP 8 P ? ? A IGU 7 A JSP 8 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale7 covale one ? A JSP 8 "O3'" ? ? ? 1_555 A IGU 9 P ? ? A JSP 8 A IGU 9 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale8 covale both ? A IGU 9 "O3'" ? ? ? 1_555 A JSP 10 P ? ? A IGU 9 A JSP 10 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale9 covale one ? A JSP 10 "O3'" ? ? ? 1_555 A 1W5 11 P ? ? A JSP 10 A 1W5 11 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale10 covale one ? A 1W5 11 "O3'" ? ? ? 1_555 A 1WA 12 P ? ? A 1W5 11 A 1WA 12 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale11 covale both ? A 1WA 12 "O3'" ? ? ? 1_555 A 1WA 13 P ? ? A 1WA 12 A 1WA 13 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale12 covale both ? A 1WA 13 "O3'" ? ? ? 1_555 A IGU 14 P ? ? A 1WA 13 A IGU 14 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale13 covale both ? A IGU 14 "O3'" ? ? ? 1_555 A DA 15 P ? ? A IGU 14 A DA 15 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale14 covale both ? B DT 2 "O3'" ? ? ? 1_555 B JSP 3 P ? ? B DT 2 B JSP 3 1_555 ? ? ? ? ? ? ? 1.584 ? ? covale15 covale one ? B JSP 3 "O3'" ? ? ? 1_555 B 1W5 4 P ? ? B JSP 3 B 1W5 4 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale16 covale one ? B 1W5 4 "O3'" ? ? ? 1_555 B 1W5 5 P ? ? B 1W5 4 B 1W5 5 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale17 covale one ? B 1W5 5 "O3'" ? ? ? 1_555 B 1WA 6 P ? ? B 1W5 5 B 1WA 6 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale18 covale both ? B 1WA 6 "O3'" ? ? ? 1_555 B IGU 7 P ? ? B 1WA 6 B IGU 7 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale19 covale both ? B IGU 7 "O3'" ? ? ? 1_555 B JSP 8 P ? ? B IGU 7 B JSP 8 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale20 covale one ? B JSP 8 "O3'" ? ? ? 1_555 B IGU 9 P ? ? B JSP 8 B IGU 9 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale21 covale both ? B IGU 9 "O3'" ? ? ? 1_555 B JSP 10 P ? ? B IGU 9 B JSP 10 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale22 covale one ? B JSP 10 "O3'" ? ? ? 1_555 B 1W5 11 P ? ? B JSP 10 B 1W5 11 1_555 ? ? ? ? ? ? ? 1.591 ? ? covale23 covale one ? B 1W5 11 "O3'" ? ? ? 1_555 B 1WA 12 P ? ? B 1W5 11 B 1WA 12 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale24 covale both ? B 1WA 12 "O3'" ? ? ? 1_555 B 1WA 13 P ? ? B 1WA 12 B 1WA 13 1_555 ? ? ? ? ? ? ? 1.594 ? ? covale25 covale both ? B 1WA 13 "O3'" ? ? ? 1_555 B IGU 14 P ? ? B 1WA 13 B IGU 14 1_555 ? ? ? ? ? ? ? 1.589 ? ? covale26 covale both ? B IGU 14 "O3'" ? ? ? 1_555 B DA 15 P ? ? B IGU 14 B DA 15 1_555 ? ? ? ? ? ? ? 1.587 ? ? metalc1 metalc ? ? D HOH . O ? ? ? 3_544 C MG . MG ? ? A HOH 119 B MG 101 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc2 metalc ? ? D HOH . O ? ? ? 3_544 C MG . MG ? ? A HOH 142 B MG 101 1_555 ? ? ? ? ? ? ? 2.052 ? ? metalc3 metalc ? ? D HOH . O ? ? ? 3_544 C MG . MG ? ? A HOH 170 B MG 101 1_555 ? ? ? ? ? ? ? 2.122 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 101 B HOH 207 1_555 ? ? ? ? ? ? ? 1.981 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 101 B HOH 211 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? B MG 101 B HOH 223 3_544 ? ? ? ? ? ? ? 2.061 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 16 N1 ? ? A DC 1 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 16 O6 ? ? A DC 1 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 16 N2 ? ? A DC 1 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 15 N1 ? ? A DT 2 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 15 N6 ? ? A DT 2 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 2 N3 ? ? A DA 15 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 2 O4 ? ? A DA 15 B DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 16 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 16 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 16 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? A HOH 119 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? D HOH . ? A HOH 142 ? 3_544 88.0 ? 2 O ? D HOH . ? A HOH 119 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? D HOH . ? A HOH 170 ? 3_544 88.6 ? 3 O ? D HOH . ? A HOH 142 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? D HOH . ? A HOH 170 ? 3_544 87.8 ? 4 O ? D HOH . ? A HOH 119 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 207 ? 1_555 94.1 ? 5 O ? D HOH . ? A HOH 142 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 207 ? 1_555 176.0 ? 6 O ? D HOH . ? A HOH 170 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 207 ? 1_555 88.9 ? 7 O ? D HOH . ? A HOH 119 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 211 ? 1_555 171.8 ? 8 O ? D HOH . ? A HOH 142 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 211 ? 1_555 84.2 ? 9 O ? D HOH . ? A HOH 170 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 211 ? 1_555 88.7 ? 10 O ? E HOH . ? B HOH 207 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 211 ? 1_555 93.6 ? 11 O ? D HOH . ? A HOH 119 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 223 ? 3_544 88.8 ? 12 O ? D HOH . ? A HOH 142 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 223 ? 3_544 89.2 ? 13 O ? D HOH . ? A HOH 170 ? 3_544 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 223 ? 3_544 176.1 ? 14 O ? E HOH . ? B HOH 207 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 223 ? 3_544 94.3 ? 15 O ? E HOH . ? B HOH 211 ? 1_555 MG ? C MG . ? B MG 101 ? 1_555 O ? E HOH . ? B HOH 223 ? 3_544 93.5 ? # _pdbx_entry_details.entry_id 8CRY _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1W5 N N N N 1 1W5 P P N N 2 1W5 C1 C Y N 3 1W5 C2 C Y N 4 1W5 O2 O N N 5 1W5 N3 N Y N 6 1W5 C4 C Y N 7 1W5 N4 N N N 8 1W5 C5 C Y N 9 1W5 C6 C Y N 10 1W5 "C1'" C N R 11 1W5 "C2'" C N N 12 1W5 "C3'" C N S 13 1W5 "O3'" O N N 14 1W5 "C4'" C N R 15 1W5 "O4'" O N N 16 1W5 "C5'" C N N 17 1W5 "O5'" O N N 18 1W5 ON1 O N N 19 1W5 ON2 O N N 20 1W5 OP1 O N N 21 1W5 OP2 O N N 22 1W5 OP3 O N N 23 1W5 H1 H N N 24 1W5 H2 H N N 25 1W5 H4 H N N 26 1W5 H5 H N N 27 1W5 H6 H N N 28 1W5 H7 H N N 29 1W5 H8 H N N 30 1W5 H9 H N N 31 1W5 H10 H N N 32 1W5 H11 H N N 33 1W5 H12 H N N 34 1W5 HOP1 H N N 35 1W5 HOP3 H N N 36 1W5 H15 H N N 37 1WA OP3 O N N 38 1WA P P N N 39 1WA N1 N Y N 40 1WA C2 C Y N 41 1WA N2 N N N 42 1WA N3 N Y N 43 1WA C4 C Y N 44 1WA N5 N Y N 45 1WA C6 C Y N 46 1WA O6 O N N 47 1WA C7 C Y N 48 1WA C8 C Y N 49 1WA N9 N Y N 50 1WA "C1'" C N R 51 1WA "C2'" C N N 52 1WA "C3'" C N S 53 1WA "O3'" O N N 54 1WA "C4'" C N R 55 1WA "O4'" O N N 56 1WA "C5'" C N N 57 1WA "O5'" O N N 58 1WA OP1 O N N 59 1WA OP2 O N N 60 1WA HOP3 H N N 61 1WA HN2 H N N 62 1WA HN2A H N N 63 1WA HN3 H N N 64 1WA H7 H N N 65 1WA H8 H N N 66 1WA "H1'" H N N 67 1WA "H2'" H N N 68 1WA "H2'A" H N N 69 1WA "H3'" H N N 70 1WA "HO3'" H N N 71 1WA "H4'" H N N 72 1WA "H5'" H N N 73 1WA "H5'A" H N N 74 1WA HOP1 H N N 75 1WA HO6 H N N 76 DA OP3 O N N 77 DA P P N N 78 DA OP1 O N N 79 DA OP2 O N N 80 DA "O5'" O N N 81 DA "C5'" C N N 82 DA "C4'" C N R 83 DA "O4'" O N N 84 DA "C3'" C N S 85 DA "O3'" O N N 86 DA "C2'" C N N 87 DA "C1'" C N R 88 DA N9 N Y N 89 DA C8 C Y N 90 DA N7 N Y N 91 DA C5 C Y N 92 DA C6 C Y N 93 DA N6 N N N 94 DA N1 N Y N 95 DA C2 C Y N 96 DA N3 N Y N 97 DA C4 C Y N 98 DA HOP3 H N N 99 DA HOP2 H N N 100 DA "H5'" H N N 101 DA "H5''" H N N 102 DA "H4'" H N N 103 DA "H3'" H N N 104 DA "HO3'" H N N 105 DA "H2'" H N N 106 DA "H2''" H N N 107 DA "H1'" H N N 108 DA H8 H N N 109 DA H61 H N N 110 DA H62 H N N 111 DA H2 H N N 112 DC OP3 O N N 113 DC P P N N 114 DC OP1 O N N 115 DC OP2 O N N 116 DC "O5'" O N N 117 DC "C5'" C N N 118 DC "C4'" C N R 119 DC "O4'" O N N 120 DC "C3'" C N S 121 DC "O3'" O N N 122 DC "C2'" C N N 123 DC "C1'" C N R 124 DC N1 N N N 125 DC C2 C N N 126 DC O2 O N N 127 DC N3 N N N 128 DC C4 C N N 129 DC N4 N N N 130 DC C5 C N N 131 DC C6 C N N 132 DC HOP3 H N N 133 DC HOP2 H N N 134 DC "H5'" H N N 135 DC "H5''" H N N 136 DC "H4'" H N N 137 DC "H3'" H N N 138 DC "HO3'" H N N 139 DC "H2'" H N N 140 DC "H2''" H N N 141 DC "H1'" H N N 142 DC H41 H N N 143 DC H42 H N N 144 DC H5 H N N 145 DC H6 H N N 146 DG OP3 O N N 147 DG P P N N 148 DG OP1 O N N 149 DG OP2 O N N 150 DG "O5'" O N N 151 DG "C5'" C N N 152 DG "C4'" C N R 153 DG "O4'" O N N 154 DG "C3'" C N S 155 DG "O3'" O N N 156 DG "C2'" C N N 157 DG "C1'" C N R 158 DG N9 N Y N 159 DG C8 C Y N 160 DG N7 N Y N 161 DG C5 C Y N 162 DG C6 C N N 163 DG O6 O N N 164 DG N1 N N N 165 DG C2 C N N 166 DG N2 N N N 167 DG N3 N N N 168 DG C4 C Y N 169 DG HOP3 H N N 170 DG HOP2 H N N 171 DG "H5'" H N N 172 DG "H5''" H N N 173 DG "H4'" H N N 174 DG "H3'" H N N 175 DG "HO3'" H N N 176 DG "H2'" H N N 177 DG "H2''" H N N 178 DG "H1'" H N N 179 DG H8 H N N 180 DG H1 H N N 181 DG H21 H N N 182 DG H22 H N N 183 DT OP3 O N N 184 DT P P N N 185 DT OP1 O N N 186 DT OP2 O N N 187 DT "O5'" O N N 188 DT "C5'" C N N 189 DT "C4'" C N R 190 DT "O4'" O N N 191 DT "C3'" C N S 192 DT "O3'" O N N 193 DT "C2'" C N N 194 DT "C1'" C N R 195 DT N1 N N N 196 DT C2 C N N 197 DT O2 O N N 198 DT N3 N N N 199 DT C4 C N N 200 DT O4 O N N 201 DT C5 C N N 202 DT C7 C N N 203 DT C6 C N N 204 DT HOP3 H N N 205 DT HOP2 H N N 206 DT "H5'" H N N 207 DT "H5''" H N N 208 DT "H4'" H N N 209 DT "H3'" H N N 210 DT "HO3'" H N N 211 DT "H2'" H N N 212 DT "H2''" H N N 213 DT "H1'" H N N 214 DT H3 H N N 215 DT H71 H N N 216 DT H72 H N N 217 DT H73 H N N 218 DT H6 H N N 219 HOH O O N N 220 HOH H1 H N N 221 HOH H2 H N N 222 IGU P P N N 223 IGU OP1 O N N 224 IGU OP2 O N N 225 IGU OP3 O N N 226 IGU "O5'" O N N 227 IGU "C5'" C N N 228 IGU "C4'" C N R 229 IGU "O4'" O N N 230 IGU "C3'" C N S 231 IGU "O3'" O N N 232 IGU "C2'" C N N 233 IGU "C1'" C N R 234 IGU N9 N N N 235 IGU C8 C N N 236 IGU N7 N N N 237 IGU C6 C N N 238 IGU N6 N N N 239 IGU C5 C N N 240 IGU N1 N N N 241 IGU C2 C N N 242 IGU O2 O N N 243 IGU N3 N N N 244 IGU C4 C N N 245 IGU HOP2 H N N 246 IGU HOP3 H N N 247 IGU "H5'" H N N 248 IGU "H5''" H N N 249 IGU "H4'" H N N 250 IGU "H3'" H N N 251 IGU "HO3'" H N N 252 IGU "H2'" H N N 253 IGU "H2''" H N N 254 IGU "H1'" H N N 255 IGU H8 H N N 256 IGU HN61 H N N 257 IGU HN62 H N N 258 IGU HN1 H N N 259 JSP C1 C N N 260 JSP "C1'" C N R 261 JSP C2 C N N 262 JSP "C2'" C N N 263 JSP "C3'" C N S 264 JSP C4 C N N 265 JSP "C4'" C N R 266 JSP "C5'" C N N 267 JSP C6 C N N 268 JSP C7 C N N 269 JSP N2 N N N 270 JSP N3 N N N 271 JSP N5 N N N 272 JSP "O3'" O N N 273 JSP O4 O N N 274 JSP "O4'" O N N 275 JSP "O5'" O N N 276 JSP OP1 O N N 277 JSP OP2 O N N 278 JSP P P N N 279 JSP H1 H N N 280 JSP H2 H N N 281 JSP H3 H N N 282 JSP H4 H N N 283 JSP H5 H N N 284 JSP H6 H N N 285 JSP H7 H N N 286 JSP H8 H N N 287 JSP H9 H N N 288 JSP H10 H N N 289 JSP H11 H N N 290 JSP H12 H N N 291 JSP H13 H N N 292 JSP H14 H N N 293 JSP H16 H N N 294 JSP OP3 O N N 295 JSP H15 H N N 296 MG MG MG N N 297 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1W5 "O3'" "C3'" sing N N 1 1W5 N4 C4 sing N N 2 1W5 "C3'" "C2'" sing N N 3 1W5 "C3'" "C4'" sing N N 4 1W5 "C2'" "C1'" sing N N 5 1W5 N3 C4 doub Y N 6 1W5 N3 C2 sing Y N 7 1W5 O2 C2 sing N N 8 1W5 C4 C5 sing Y N 9 1W5 C2 C1 doub Y N 10 1W5 ON1 N doub N N 11 1W5 C5 N sing N N 12 1W5 C5 C6 doub Y N 13 1W5 C1 C6 sing Y N 14 1W5 C1 "C1'" sing N N 15 1W5 N ON2 sing N N 16 1W5 OP2 P doub N N 17 1W5 "C1'" "O4'" sing N N 18 1W5 "O5'" P sing N N 19 1W5 "O5'" "C5'" sing N N 20 1W5 "C4'" "C5'" sing N N 21 1W5 "C4'" "O4'" sing N N 22 1W5 P OP1 sing N N 23 1W5 P OP3 sing N N 24 1W5 N4 H1 sing N N 25 1W5 N4 H2 sing N N 26 1W5 C6 H4 sing N N 27 1W5 "C1'" H5 sing N N 28 1W5 "C2'" H6 sing N N 29 1W5 "C2'" H7 sing N N 30 1W5 "C3'" H8 sing N N 31 1W5 "O3'" H9 sing N N 32 1W5 "C4'" H10 sing N N 33 1W5 "C5'" H11 sing N N 34 1W5 "C5'" H12 sing N N 35 1W5 OP1 HOP1 sing N N 36 1W5 OP3 HOP3 sing N N 37 1W5 O2 H15 sing N N 38 1WA P OP3 sing N N 39 1WA OP3 HOP3 sing N N 40 1WA OP2 P doub N N 41 1WA "O5'" P sing N N 42 1WA P OP1 sing N N 43 1WA C2 N1 doub Y N 44 1WA N1 C6 sing Y N 45 1WA N2 C2 sing N N 46 1WA C2 N3 sing Y N 47 1WA N2 HN2 sing N N 48 1WA N2 HN2A sing N N 49 1WA N3 C4 sing Y N 50 1WA N3 HN3 sing N N 51 1WA C4 N5 sing Y N 52 1WA C4 N9 doub Y N 53 1WA C6 N5 doub Y N 54 1WA N5 C7 sing Y N 55 1WA C6 O6 sing N N 56 1WA C7 C8 doub Y N 57 1WA C7 H7 sing N N 58 1WA N9 C8 sing Y N 59 1WA C8 H8 sing N N 60 1WA N9 "C1'" sing N N 61 1WA "C2'" "C1'" sing N N 62 1WA "C1'" "O4'" sing N N 63 1WA "C1'" "H1'" sing N N 64 1WA "C2'" "C3'" sing N N 65 1WA "C2'" "H2'" sing N N 66 1WA "C2'" "H2'A" sing N N 67 1WA "O3'" "C3'" sing N N 68 1WA "C3'" "C4'" sing N N 69 1WA "C3'" "H3'" sing N N 70 1WA "O3'" "HO3'" sing N N 71 1WA "C4'" "O4'" sing N N 72 1WA "C4'" "C5'" sing N N 73 1WA "C4'" "H4'" sing N N 74 1WA "O5'" "C5'" sing N N 75 1WA "C5'" "H5'" sing N N 76 1WA "C5'" "H5'A" sing N N 77 1WA OP1 HOP1 sing N N 78 1WA O6 HO6 sing N N 79 DA OP3 P sing N N 80 DA OP3 HOP3 sing N N 81 DA P OP1 doub N N 82 DA P OP2 sing N N 83 DA P "O5'" sing N N 84 DA OP2 HOP2 sing N N 85 DA "O5'" "C5'" sing N N 86 DA "C5'" "C4'" sing N N 87 DA "C5'" "H5'" sing N N 88 DA "C5'" "H5''" sing N N 89 DA "C4'" "O4'" sing N N 90 DA "C4'" "C3'" sing N N 91 DA "C4'" "H4'" sing N N 92 DA "O4'" "C1'" sing N N 93 DA "C3'" "O3'" sing N N 94 DA "C3'" "C2'" sing N N 95 DA "C3'" "H3'" sing N N 96 DA "O3'" "HO3'" sing N N 97 DA "C2'" "C1'" sing N N 98 DA "C2'" "H2'" sing N N 99 DA "C2'" "H2''" sing N N 100 DA "C1'" N9 sing N N 101 DA "C1'" "H1'" sing N N 102 DA N9 C8 sing Y N 103 DA N9 C4 sing Y N 104 DA C8 N7 doub Y N 105 DA C8 H8 sing N N 106 DA N7 C5 sing Y N 107 DA C5 C6 sing Y N 108 DA C5 C4 doub Y N 109 DA C6 N6 sing N N 110 DA C6 N1 doub Y N 111 DA N6 H61 sing N N 112 DA N6 H62 sing N N 113 DA N1 C2 sing Y N 114 DA C2 N3 doub Y N 115 DA C2 H2 sing N N 116 DA N3 C4 sing Y N 117 DC OP3 P sing N N 118 DC OP3 HOP3 sing N N 119 DC P OP1 doub N N 120 DC P OP2 sing N N 121 DC P "O5'" sing N N 122 DC OP2 HOP2 sing N N 123 DC "O5'" "C5'" sing N N 124 DC "C5'" "C4'" sing N N 125 DC "C5'" "H5'" sing N N 126 DC "C5'" "H5''" sing N N 127 DC "C4'" "O4'" sing N N 128 DC "C4'" "C3'" sing N N 129 DC "C4'" "H4'" sing N N 130 DC "O4'" "C1'" sing N N 131 DC "C3'" "O3'" sing N N 132 DC "C3'" "C2'" sing N N 133 DC "C3'" "H3'" sing N N 134 DC "O3'" "HO3'" sing N N 135 DC "C2'" "C1'" sing N N 136 DC "C2'" "H2'" sing N N 137 DC "C2'" "H2''" sing N N 138 DC "C1'" N1 sing N N 139 DC "C1'" "H1'" sing N N 140 DC N1 C2 sing N N 141 DC N1 C6 sing N N 142 DC C2 O2 doub N N 143 DC C2 N3 sing N N 144 DC N3 C4 doub N N 145 DC C4 N4 sing N N 146 DC C4 C5 sing N N 147 DC N4 H41 sing N N 148 DC N4 H42 sing N N 149 DC C5 C6 doub N N 150 DC C5 H5 sing N N 151 DC C6 H6 sing N N 152 DG OP3 P sing N N 153 DG OP3 HOP3 sing N N 154 DG P OP1 doub N N 155 DG P OP2 sing N N 156 DG P "O5'" sing N N 157 DG OP2 HOP2 sing N N 158 DG "O5'" "C5'" sing N N 159 DG "C5'" "C4'" sing N N 160 DG "C5'" "H5'" sing N N 161 DG "C5'" "H5''" sing N N 162 DG "C4'" "O4'" sing N N 163 DG "C4'" "C3'" sing N N 164 DG "C4'" "H4'" sing N N 165 DG "O4'" "C1'" sing N N 166 DG "C3'" "O3'" sing N N 167 DG "C3'" "C2'" sing N N 168 DG "C3'" "H3'" sing N N 169 DG "O3'" "HO3'" sing N N 170 DG "C2'" "C1'" sing N N 171 DG "C2'" "H2'" sing N N 172 DG "C2'" "H2''" sing N N 173 DG "C1'" N9 sing N N 174 DG "C1'" "H1'" sing N N 175 DG N9 C8 sing Y N 176 DG N9 C4 sing Y N 177 DG C8 N7 doub Y N 178 DG C8 H8 sing N N 179 DG N7 C5 sing Y N 180 DG C5 C6 sing N N 181 DG C5 C4 doub Y N 182 DG C6 O6 doub N N 183 DG C6 N1 sing N N 184 DG N1 C2 sing N N 185 DG N1 H1 sing N N 186 DG C2 N2 sing N N 187 DG C2 N3 doub N N 188 DG N2 H21 sing N N 189 DG N2 H22 sing N N 190 DG N3 C4 sing N N 191 DT OP3 P sing N N 192 DT OP3 HOP3 sing N N 193 DT P OP1 doub N N 194 DT P OP2 sing N N 195 DT P "O5'" sing N N 196 DT OP2 HOP2 sing N N 197 DT "O5'" "C5'" sing N N 198 DT "C5'" "C4'" sing N N 199 DT "C5'" "H5'" sing N N 200 DT "C5'" "H5''" sing N N 201 DT "C4'" "O4'" sing N N 202 DT "C4'" "C3'" sing N N 203 DT "C4'" "H4'" sing N N 204 DT "O4'" "C1'" sing N N 205 DT "C3'" "O3'" sing N N 206 DT "C3'" "C2'" sing N N 207 DT "C3'" "H3'" sing N N 208 DT "O3'" "HO3'" sing N N 209 DT "C2'" "C1'" sing N N 210 DT "C2'" "H2'" sing N N 211 DT "C2'" "H2''" sing N N 212 DT "C1'" N1 sing N N 213 DT "C1'" "H1'" sing N N 214 DT N1 C2 sing N N 215 DT N1 C6 sing N N 216 DT C2 O2 doub N N 217 DT C2 N3 sing N N 218 DT N3 C4 sing N N 219 DT N3 H3 sing N N 220 DT C4 O4 doub N N 221 DT C4 C5 sing N N 222 DT C5 C7 sing N N 223 DT C5 C6 doub N N 224 DT C7 H71 sing N N 225 DT C7 H72 sing N N 226 DT C7 H73 sing N N 227 DT C6 H6 sing N N 228 HOH O H1 sing N N 229 HOH O H2 sing N N 230 IGU P OP1 doub N N 231 IGU P OP2 sing N N 232 IGU P OP3 sing N N 233 IGU P "O5'" sing N N 234 IGU OP2 HOP2 sing N N 235 IGU OP3 HOP3 sing N N 236 IGU "O5'" "C5'" sing N N 237 IGU "C5'" "C4'" sing N N 238 IGU "C5'" "H5'" sing N N 239 IGU "C5'" "H5''" sing N N 240 IGU "C4'" "O4'" sing N N 241 IGU "C4'" "C3'" sing N N 242 IGU "C4'" "H4'" sing N N 243 IGU "O4'" "C1'" sing N N 244 IGU "C3'" "O3'" sing N N 245 IGU "C3'" "C2'" sing N N 246 IGU "C3'" "H3'" sing N N 247 IGU "O3'" "HO3'" sing N N 248 IGU "C2'" "C1'" sing N N 249 IGU "C2'" "H2'" sing N N 250 IGU "C2'" "H2''" sing N N 251 IGU "C1'" N9 sing N N 252 IGU "C1'" "H1'" sing N N 253 IGU N9 C8 sing N N 254 IGU N9 C4 sing N N 255 IGU C8 N7 doub N N 256 IGU C8 H8 sing N N 257 IGU N7 C5 sing N N 258 IGU C6 N6 sing N N 259 IGU C6 C5 doub N N 260 IGU C6 N1 sing N N 261 IGU N6 HN61 sing N N 262 IGU N6 HN62 sing N N 263 IGU C5 C4 sing N N 264 IGU N1 C2 sing N N 265 IGU C2 O2 doub N N 266 IGU C2 N3 sing N N 267 IGU N3 C4 doub N N 268 IGU N1 HN1 sing N N 269 JSP "O3'" "C3'" sing N N 270 JSP "O5'" P sing N N 271 JSP "O5'" "C5'" sing N N 272 JSP "C3'" "C4'" sing N N 273 JSP "C3'" "C2'" sing N N 274 JSP OP2 P sing N N 275 JSP OP1 P doub N N 276 JSP "C4'" "C5'" sing N N 277 JSP "C4'" "O4'" sing N N 278 JSP "C2'" "C1'" sing N N 279 JSP "O4'" "C1'" sing N N 280 JSP "C1'" C1 sing N N 281 JSP C1 C6 doub N N 282 JSP C1 C2 sing N N 283 JSP C6 N5 sing N N 284 JSP N2 C2 sing N N 285 JSP C2 N3 doub N N 286 JSP N5 C7 sing N N 287 JSP N5 C4 sing N N 288 JSP N3 C4 sing N N 289 JSP C4 O4 doub N N 290 JSP "C1'" H1 sing N N 291 JSP "C2'" H2 sing N N 292 JSP "C2'" H3 sing N N 293 JSP "C3'" H4 sing N N 294 JSP "C4'" H5 sing N N 295 JSP "C5'" H6 sing N N 296 JSP "C5'" H7 sing N N 297 JSP C6 H8 sing N N 298 JSP C7 H9 sing N N 299 JSP C7 H10 sing N N 300 JSP C7 H11 sing N N 301 JSP N2 H12 sing N N 302 JSP N2 H13 sing N N 303 JSP "O3'" H14 sing N N 304 JSP OP2 H16 sing N N 305 JSP P OP3 sing N N 306 JSP OP3 H15 sing N N 307 # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 16 1_555 0.099 -0.111 0.108 -11.389 1.001 2.086 1 A_DC1:DG16_B A 1 ? B 16 ? 19 1 1 A DT 2 1_555 B DA 15 1_555 0.030 -0.088 -0.022 11.293 -1.787 2.325 2 A_DT2:DA15_B A 2 ? B 15 ? 20 1 1 A DA 15 1_555 B DT 2 1_555 0.214 -0.169 0.200 -2.744 -7.622 -3.827 3 A_DA15:DT2_B A 15 ? B 2 ? 20 1 1 A DG 16 1_555 B DC 1 1_555 -0.123 -0.114 0.411 7.092 -9.599 0.327 4 A_DG16:DC1_B A 16 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 16 1_555 A DT 2 1_555 B DA 15 1_555 -0.236 -1.622 2.872 -1.066 0.236 26.024 -3.656 0.269 2.865 0.524 2.366 26.046 1 AA_DC1DT2:DA15DG16_BB A 1 ? B 16 ? A 2 ? B 15 ? 1 A DA 15 1_555 B DT 2 1_555 A DG 16 1_555 B DC 1 1_555 0.473 -1.374 3.079 0.454 -2.067 32.818 -2.089 -0.762 3.163 -3.653 -0.803 32.884 2 AA_DA15DG16:DC1DT2_BB A 15 ? B 2 ? A 16 ? B 1 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 193908 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 1W5 ? ? 1W5 ? ? 'SUBJECT OF INVESTIGATION' ? 2 1WA ? ? 1WA ? ? 'SUBJECT OF INVESTIGATION' ? 3 IGU ? ? IGU ? ? 'SUBJECT OF INVESTIGATION' ? 4 JSP ? ? JSP ? ? 'SUBJECT OF INVESTIGATION' ? # _atom_sites.entry_id 8CRY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.024359 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021835 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019782 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P # loop_