HEADER VIRAL PROTEIN,HYDROLASE/INHIBITOR 14-MAY-22 8CTF TITLE THE N-TERMINAL DOMAIN OF PA ENDONUCLEASE FROM THE INFLUENZA H1N1 VIRAL TITLE 2 POLYMERASE IN COMPLEX WITH 3-HYDROXY-4-OXO-1,4-DIHYDROPYRIDINE-2- TITLE 3 CARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P2; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 641501; SOURCE 4 STRAIN: SWL A/CALIFORNIA/04/2009 H1N1; SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS DRUG DISCOVERY, METAL-BINDING PHARMACOPHORE, ISOSTERES, INFLUENZA KEYWDS 2 ENDONUCLEASE, VIRAL PROTEIN, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.J.KOHLBRAND,R.W.STOKES,J.KARGES,H.SEO,B.SANKARAN,S.M.COHEN REVDAT 3 25-OCT-23 8CTF 1 REMARK REVDAT 2 01-FEB-23 8CTF 1 JRNL REVDAT 1 21-DEC-22 8CTF 0 JRNL AUTH R.W.STOKES,A.J.KOHLBRAND,H.SEO,B.SANKARAN,J.KARGES,S.M.COHEN JRNL TITL CARBOXYLIC ACID ISOSTERE DERIVATIVES OF HYDROXYPYRIDINONES JRNL TITL 2 AS CORE SCAFFOLDS FOR INFLUENZA ENDONUCLEASE INHIBITORS. JRNL REF ACS MED.CHEM.LETT. V. 14 75 2023 JRNL REFN ISSN 1948-5875 JRNL PMID 36655124 JRNL DOI 10.1021/ACSMEDCHEMLETT.2C00434 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 21016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.5200 - 5.2800 1.00 1272 151 0.1856 0.1978 REMARK 3 2 5.2700 - 4.1900 1.00 1267 139 0.1509 0.2086 REMARK 3 3 4.1900 - 3.6600 1.00 1279 136 0.1693 0.2360 REMARK 3 4 3.6600 - 3.3200 1.00 1257 144 0.1967 0.1908 REMARK 3 5 3.3200 - 3.0900 1.00 1256 146 0.2335 0.2522 REMARK 3 6 3.0900 - 2.9000 1.00 1263 132 0.2376 0.3246 REMARK 3 7 2.9000 - 2.7600 1.00 1282 143 0.2417 0.3105 REMARK 3 8 2.7600 - 2.6400 0.99 1253 143 0.2534 0.2895 REMARK 3 9 2.6400 - 2.5400 0.99 1234 146 0.2489 0.3124 REMARK 3 10 2.5400 - 2.4500 1.00 1265 145 0.2675 0.3823 REMARK 3 11 2.4500 - 2.3700 0.99 1256 146 0.2710 0.2949 REMARK 3 12 2.3700 - 2.3100 1.00 1260 140 0.2603 0.3175 REMARK 3 13 2.3100 - 2.2400 0.98 1239 141 0.3000 0.2915 REMARK 3 14 2.2400 - 2.1900 0.98 1254 135 0.3343 0.4044 REMARK 3 15 2.1900 - 2.1400 0.99 1254 138 0.3312 0.3443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.279 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.652 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.83 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1537 REMARK 3 ANGLE : 0.441 2061 REMARK 3 CHIRALITY : 0.039 216 REMARK 3 PLANARITY : 0.002 265 REMARK 3 DIHEDRAL : 6.870 201 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4337 7.3968 -20.2052 REMARK 3 T TENSOR REMARK 3 T11: 0.7802 T22: 0.4763 REMARK 3 T33: 0.5680 T12: 0.0764 REMARK 3 T13: 0.0852 T23: -0.1789 REMARK 3 L TENSOR REMARK 3 L11: 7.4226 L22: 4.7897 REMARK 3 L33: 8.7517 L12: 4.3032 REMARK 3 L13: 3.0336 L23: 0.5918 REMARK 3 S TENSOR REMARK 3 S11: 0.1010 S12: 1.1452 S13: -0.6350 REMARK 3 S21: -0.2587 S22: 0.1616 S23: -0.0461 REMARK 3 S31: 0.3686 S32: 0.2837 S33: -0.3093 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1236 12.7794 -8.1497 REMARK 3 T TENSOR REMARK 3 T11: 0.7281 T22: 0.4038 REMARK 3 T33: 0.4679 T12: -0.0339 REMARK 3 T13: 0.0743 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 5.9194 L22: 1.3412 REMARK 3 L33: 0.9123 L12: 0.2298 REMARK 3 L13: -0.4569 L23: 0.1977 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: -0.0139 S13: -0.2123 REMARK 3 S21: 0.1436 S22: -0.0270 S23: 0.3521 REMARK 3 S31: -0.1526 S32: -0.0832 S33: 0.0011 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5627 19.7042 -5.4285 REMARK 3 T TENSOR REMARK 3 T11: 0.7288 T22: 0.3194 REMARK 3 T33: 0.3903 T12: -0.0568 REMARK 3 T13: 0.0358 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 8.5669 L22: 1.4227 REMARK 3 L33: 2.1052 L12: -1.1631 REMARK 3 L13: -0.2617 L23: -0.2240 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -0.0744 S13: 0.2800 REMARK 3 S21: 0.1884 S22: 0.0031 S23: 0.1035 REMARK 3 S31: 0.0476 S32: 0.0122 S33: -0.0178 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CTF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000265256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21016 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 65.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.00 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.63600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6E6V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG4000, 100 MM TRIS, PH 8.35, 200 REMARK 280 -220 MM SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.63400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.81700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 79.63400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.81700 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 79.63400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 39.81700 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 79.63400 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 39.81700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 319 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 349 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 MET A -1 REMARK 465 SER A 65 REMARK 465 GLY A 66 REMARK 465 ASP A 67 REMARK 465 PRO A 68 REMARK 465 ASN A 69 REMARK 465 ALA A 70 REMARK 465 LEU A 71 REMARK 465 LEU A 72 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 141 5.64 -65.44 REMARK 500 LYS A 158 19.05 57.98 REMARK 500 THR A 162 -59.66 68.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 353 DISTANCE = 7.79 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 203 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 103.9 REMARK 620 3 GLU A 119 OE2 166.7 85.0 REMARK 620 4 ILE A 120 O 83.0 91.0 87.1 REMARK 620 5 Q3O A 202 O01 100.2 98.7 87.9 168.7 REMARK 620 6 Q3O A 202 O11 80.5 175.5 90.9 90.7 79.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 204 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 89.8 REMARK 620 3 Q3O A 202 O01 98.5 88.6 REMARK 620 4 Q3O A 202 O05 93.6 169.9 81.5 REMARK 620 5 HOH A 301 O 177.4 91.2 83.9 85.8 REMARK 620 6 HOH A 310 O 91.8 96.8 168.4 92.5 85.7 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7V04 RELATED DB: PDB REMARK 900 7V04 CONTAINS THE SAME PROTEIN COMPLEXED WITH ANOTHER INHIBITOR REMARK 900 FROM THE SAME SET OF MOLECULES IN THE SAME CITATION. DBREF 8CTF A 1 198 UNP C3W5S0 C3W5S0_I09A0 1 198 SEQADV 8CTF MET A -5 UNP C3W5S0 INITIATING METHIONINE SEQADV 8CTF GLY A -4 UNP C3W5S0 EXPRESSION TAG SEQADV 8CTF SER A -3 UNP C3W5S0 EXPRESSION TAG SEQADV 8CTF GLY A -2 UNP C3W5S0 EXPRESSION TAG SEQADV 8CTF MET A -1 UNP C3W5S0 EXPRESSION TAG SEQADV 8CTF SER A 0 UNP C3W5S0 EXPRESSION TAG SEQADV 8CTF GLY A 52 UNP C3W5S0 HIS 52 CONFLICT SEQADV 8CTF A UNP C3W5S0 PHE 53 DELETION SEQADV 8CTF A UNP C3W5S0 ILE 54 DELETION SEQADV 8CTF A UNP C3W5S0 ASP 55 DELETION SEQADV 8CTF A UNP C3W5S0 GLU 56 DELETION SEQADV 8CTF A UNP C3W5S0 ARG 57 DELETION SEQADV 8CTF A UNP C3W5S0 GLY 58 DELETION SEQADV 8CTF A UNP C3W5S0 GLU 59 DELETION SEQADV 8CTF A UNP C3W5S0 SER 60 DELETION SEQADV 8CTF A UNP C3W5S0 ILE 61 DELETION SEQADV 8CTF A UNP C3W5S0 ILE 62 DELETION SEQADV 8CTF A UNP C3W5S0 VAL 63 DELETION SEQADV 8CTF A UNP C3W5S0 GLU 64 DELETION SEQRES 1 A 192 MET GLY SER GLY MET SER MET GLU ASP PHE VAL ARG GLN SEQRES 2 A 192 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 A 192 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 A 192 LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 A 192 MET TYR SER ASP PHE GLY SER GLY ASP PRO ASN ALA LEU SEQRES 6 A 192 LEU LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG SEQRES 7 A 192 ILE MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR SEQRES 8 A 192 THR GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR SEQRES 9 A 192 ASP TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR SEQRES 10 A 192 ARG ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN SEQRES 11 A 192 LYS ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER SEQRES 12 A 192 PHE THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR SEQRES 13 A 192 LEU ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU SEQRES 14 A 192 PHE THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP SEQRES 15 A 192 ASP SER PHE ARG GLN SER GLU ARG GLY GLU HET ACT A 201 7 HET Q3O A 202 14 HET MN A 203 1 HET MN A 204 1 HETNAM ACT ACETATE ION HETNAM Q3O 3-HYDROXY-4-OXO-1,4-DIHYDROPYRIDINE-2-CARBOXYLIC ACID HETNAM MN MANGANESE (II) ION FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 Q3O C6 H5 N O4 FORMUL 4 MN 2(MN 2+) FORMUL 6 HOH *53(H2 O) HELIX 1 AA1 SER A 0 PHE A 9 1 10 HELIX 2 AA2 ASN A 10 GLY A 25 1 16 HELIX 3 AA3 GLU A 31 PHE A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 139 1 14 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 SER A 194 1 8 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O PHE A 148 N GLY A 121 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 203 1555 1555 2.18 LINK OE1 GLU A 80 MN MN A 204 1555 1555 2.32 LINK OD2 ASP A 108 MN MN A 203 1555 1555 2.15 LINK OD1 ASP A 108 MN MN A 204 1555 1555 2.13 LINK OE2 GLU A 119 MN MN A 203 1555 1555 2.28 LINK O ILE A 120 MN MN A 203 1555 1555 2.11 LINK O01 Q3O A 202 MN MN A 203 1555 1555 2.32 LINK O11 Q3O A 202 MN MN A 203 1555 1555 2.06 LINK O01 Q3O A 202 MN MN A 204 1555 1555 2.01 LINK O05 Q3O A 202 MN MN A 204 1555 1555 2.25 LINK MN MN A 204 O HOH A 301 1555 1555 2.42 LINK MN MN A 204 O HOH A 310 1555 1555 2.29 CRYST1 75.660 75.660 119.451 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013217 0.007631 0.000000 0.00000 SCALE2 0.000000 0.015262 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008372 0.00000