data_8CTK # _entry.id 8CTK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8CTK pdb_00008ctk 10.2210/pdb8ctk/pdb WWPDB D_1000265428 ? ? EMDB EMD-26993 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of SARS-CoV-2 M protein in a lipid nanodisc' _pdbx_database_related.db_id EMD-26993 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8CTK _pdbx_database_status.recvd_initial_deposition_date 2022-05-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Dolan, K.A.' 1 0000-0002-9335-7791 'Brohawn, S.G.' 2 0000-0001-6768-3406 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary Elife ? ? 2050-084X ? ? 11 ? ? ? 'Structure of SARS-CoV-2 M protein in lipid nanodiscs.' 2022 ? 10.7554/eLife.81702 36264056 ? ? ? ? ? ? ? ? ? DK ? ? 1 'Acta Crystallogr., Sect. D: Biol. Crystallogr.' ABCRE6 0766 0907-4449 ? ? 74 ? 531 544 'Real-space refinement in PHENIX for cryo-EM and crystallography' 2018 ? ? ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dolan, K.A.' 1 ? primary 'Dutta, M.' 2 ? primary 'Kern, D.M.' 3 ? primary 'Kotecha, A.' 4 ? primary 'Voth, G.A.' 5 0000-0002-3267-6748 primary 'Brohawn, S.G.' 6 0000-0001-6768-3406 1 'Afonine, P.V.' 7 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8CTK _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8CTK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Membrane protein' _entity.formula_weight 26190.693 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'M,E1 glycoprotein,Matrix glycoprotein,Membrane glycoprotein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGI AIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCD IKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQSNSLEVLFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGI AIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCD IKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQSNSLEVLFQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ASP n 1 4 SER n 1 5 ASN n 1 6 GLY n 1 7 THR n 1 8 ILE n 1 9 THR n 1 10 VAL n 1 11 GLU n 1 12 GLU n 1 13 LEU n 1 14 LYS n 1 15 LYS n 1 16 LEU n 1 17 LEU n 1 18 GLU n 1 19 GLN n 1 20 TRP n 1 21 ASN n 1 22 LEU n 1 23 VAL n 1 24 ILE n 1 25 GLY n 1 26 PHE n 1 27 LEU n 1 28 PHE n 1 29 LEU n 1 30 THR n 1 31 TRP n 1 32 ILE n 1 33 CYS n 1 34 LEU n 1 35 LEU n 1 36 GLN n 1 37 PHE n 1 38 ALA n 1 39 TYR n 1 40 ALA n 1 41 ASN n 1 42 ARG n 1 43 ASN n 1 44 ARG n 1 45 PHE n 1 46 LEU n 1 47 TYR n 1 48 ILE n 1 49 ILE n 1 50 LYS n 1 51 LEU n 1 52 ILE n 1 53 PHE n 1 54 LEU n 1 55 TRP n 1 56 LEU n 1 57 LEU n 1 58 TRP n 1 59 PRO n 1 60 VAL n 1 61 THR n 1 62 LEU n 1 63 ALA n 1 64 CYS n 1 65 PHE n 1 66 VAL n 1 67 LEU n 1 68 ALA n 1 69 ALA n 1 70 VAL n 1 71 TYR n 1 72 ARG n 1 73 ILE n 1 74 ASN n 1 75 TRP n 1 76 ILE n 1 77 THR n 1 78 GLY n 1 79 GLY n 1 80 ILE n 1 81 ALA n 1 82 ILE n 1 83 ALA n 1 84 MET n 1 85 ALA n 1 86 CYS n 1 87 LEU n 1 88 VAL n 1 89 GLY n 1 90 LEU n 1 91 MET n 1 92 TRP n 1 93 LEU n 1 94 SER n 1 95 TYR n 1 96 PHE n 1 97 ILE n 1 98 ALA n 1 99 SER n 1 100 PHE n 1 101 ARG n 1 102 LEU n 1 103 PHE n 1 104 ALA n 1 105 ARG n 1 106 THR n 1 107 ARG n 1 108 SER n 1 109 MET n 1 110 TRP n 1 111 SER n 1 112 PHE n 1 113 ASN n 1 114 PRO n 1 115 GLU n 1 116 THR n 1 117 ASN n 1 118 ILE n 1 119 LEU n 1 120 LEU n 1 121 ASN n 1 122 VAL n 1 123 PRO n 1 124 LEU n 1 125 HIS n 1 126 GLY n 1 127 THR n 1 128 ILE n 1 129 LEU n 1 130 THR n 1 131 ARG n 1 132 PRO n 1 133 LEU n 1 134 LEU n 1 135 GLU n 1 136 SER n 1 137 GLU n 1 138 LEU n 1 139 VAL n 1 140 ILE n 1 141 GLY n 1 142 ALA n 1 143 VAL n 1 144 ILE n 1 145 LEU n 1 146 ARG n 1 147 GLY n 1 148 HIS n 1 149 LEU n 1 150 ARG n 1 151 ILE n 1 152 ALA n 1 153 GLY n 1 154 HIS n 1 155 HIS n 1 156 LEU n 1 157 GLY n 1 158 ARG n 1 159 CYS n 1 160 ASP n 1 161 ILE n 1 162 LYS n 1 163 ASP n 1 164 LEU n 1 165 PRO n 1 166 LYS n 1 167 GLU n 1 168 ILE n 1 169 THR n 1 170 VAL n 1 171 ALA n 1 172 THR n 1 173 SER n 1 174 ARG n 1 175 THR n 1 176 LEU n 1 177 SER n 1 178 TYR n 1 179 TYR n 1 180 LYS n 1 181 LEU n 1 182 GLY n 1 183 ALA n 1 184 SER n 1 185 GLN n 1 186 ARG n 1 187 VAL n 1 188 ALA n 1 189 GLY n 1 190 ASP n 1 191 SER n 1 192 GLY n 1 193 PHE n 1 194 ALA n 1 195 ALA n 1 196 TYR n 1 197 SER n 1 198 ARG n 1 199 TYR n 1 200 ARG n 1 201 ILE n 1 202 GLY n 1 203 ASN n 1 204 TYR n 1 205 LYS n 1 206 LEU n 1 207 ASN n 1 208 THR n 1 209 ASP n 1 210 HIS n 1 211 SER n 1 212 SER n 1 213 SER n 1 214 SER n 1 215 ASP n 1 216 ASN n 1 217 ILE n 1 218 ALA n 1 219 LEU n 1 220 LEU n 1 221 VAL n 1 222 GLN n 1 223 SER n 1 224 ASN n 1 225 SER n 1 226 LEU n 1 227 GLU n 1 228 VAL n 1 229 LEU n 1 230 PHE n 1 231 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 231 _entity_src_gen.gene_src_common_name '2019-nCoV, SARS-CoV-2' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VME1_SARS2 _struct_ref.pdbx_db_accession P0DTC5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGI AIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCD IKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQ ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8CTK A 1 ? 222 ? P0DTC5 1 ? 222 ? 1 222 2 1 8CTK B 1 ? 222 ? P0DTC5 1 ? 222 ? 1 222 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8CTK SER A 223 ? UNP P0DTC5 ? ? 'expression tag' 223 1 1 8CTK ASN A 224 ? UNP P0DTC5 ? ? 'expression tag' 224 2 1 8CTK SER A 225 ? UNP P0DTC5 ? ? 'expression tag' 225 3 1 8CTK LEU A 226 ? UNP P0DTC5 ? ? 'expression tag' 226 4 1 8CTK GLU A 227 ? UNP P0DTC5 ? ? 'expression tag' 227 5 1 8CTK VAL A 228 ? UNP P0DTC5 ? ? 'expression tag' 228 6 1 8CTK LEU A 229 ? UNP P0DTC5 ? ? 'expression tag' 229 7 1 8CTK PHE A 230 ? UNP P0DTC5 ? ? 'expression tag' 230 8 1 8CTK GLN A 231 ? UNP P0DTC5 ? ? 'expression tag' 231 9 2 8CTK SER B 223 ? UNP P0DTC5 ? ? 'expression tag' 223 10 2 8CTK ASN B 224 ? UNP P0DTC5 ? ? 'expression tag' 224 11 2 8CTK SER B 225 ? UNP P0DTC5 ? ? 'expression tag' 225 12 2 8CTK LEU B 226 ? UNP P0DTC5 ? ? 'expression tag' 226 13 2 8CTK GLU B 227 ? UNP P0DTC5 ? ? 'expression tag' 227 14 2 8CTK VAL B 228 ? UNP P0DTC5 ? ? 'expression tag' 228 15 2 8CTK LEU B 229 ? UNP P0DTC5 ? ? 'expression tag' 229 16 2 8CTK PHE B 230 ? UNP P0DTC5 ? ? 'expression tag' 230 17 2 8CTK GLN B 231 ? UNP P0DTC5 ? ? 'expression tag' 231 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8CTK _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 42.42 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8CTK _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0032 ? 3126 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.6822 ? 4254 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0468 ? 486 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0047 ? 512 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 3.9848 ? 420 ? f_dihedral_angle_d ? ? # _refine_ls_restr_ncs.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_ls_restr_ncs.dom_id d_2 _refine_ls_restr_ncs.ncs_model_details ? _refine_ls_restr_ncs.rms_dev_B_iso ? _refine_ls_restr_ncs.rms_dev_position 8.62962799761e-12 _refine_ls_restr_ncs.weight_B_iso ? _refine_ls_restr_ncs.weight_position ? _refine_ls_restr_ncs.pdbx_ordinal 1 _refine_ls_restr_ncs.pdbx_type 'NCS constraints' _refine_ls_restr_ncs.pdbx_asym_id ? _refine_ls_restr_ncs.pdbx_auth_asym_id B _refine_ls_restr_ncs.pdbx_number ? _refine_ls_restr_ncs.pdbx_rms ? _refine_ls_restr_ncs.pdbx_weight ? _refine_ls_restr_ncs.pdbx_ens_id ens_1 # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.matrix[1][1] -0.999992069585 _struct_ncs_oper.matrix[1][2] -0.00208585001278 _struct_ncs_oper.matrix[1][3] 0.003392638651 _struct_ncs_oper.matrix[2][1] 0.00207034571065 _struct_ncs_oper.matrix[2][2] -0.999987427585 _struct_ncs_oper.matrix[2][3] -0.00456709312518 _struct_ncs_oper.matrix[3][1] 0.00340212226859 _struct_ncs_oper.matrix[3][2] -0.00456003297136 _struct_ncs_oper.matrix[3][3] 0.999983815701 _struct_ncs_oper.vector[1] 209.132617949 _struct_ncs_oper.vector[2] 209.670532741 _struct_ncs_oper.vector[3] 0.0551990723641 _struct_ncs_oper.details ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;chain "B" ; ens_1 d_2 ;chain "A" ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 . B LEU 1 . B TYR 188 ? ? ? ? ? ? ens_1 d_2 1 . A LEU 1 . A TYR 188 ? ? ? ? ? ? # _struct_ncs_ens.id ens_1 _struct_ncs_ens.details ? # _struct_ncs_ens_gen.ens_id ens_1 _struct_ncs_ens_gen.dom_id_1 d_2 _struct_ncs_ens_gen.dom_id_2 d_1 _struct_ncs_ens_gen.oper_id 1 # _struct.entry_id 8CTK _struct.title 'Cryo-EM structure of SARS-CoV-2 M protein in a lipid nanodisc' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8CTK _struct_keywords.text 'SARS-COV-2, CORONAVIRUS, VIRAL PROTEIN, CAPSID PROTEIN, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 17 ? ALA A 38 ? LEU A 17 ALA A 38 1 ? 22 HELX_P HELX_P2 AA2 ASN A 43 ? LEU A 56 ? ASN A 43 LEU A 56 1 ? 14 HELX_P HELX_P3 AA3 LEU A 56 ? TYR A 71 ? LEU A 56 TYR A 71 1 ? 16 HELX_P HELX_P4 AA4 ASN A 74 ? ARG A 107 ? ASN A 74 ARG A 107 1 ? 34 HELX_P HELX_P5 AA5 SER A 108 ? ASN A 113 ? SER A 108 ASN A 113 5 ? 6 HELX_P HELX_P6 AA6 GLU B 18 ? ALA B 38 ? GLU B 18 ALA B 38 1 ? 21 HELX_P HELX_P7 AA7 ASN B 43 ? LEU B 56 ? ASN B 43 LEU B 56 1 ? 14 HELX_P HELX_P8 AA8 LEU B 56 ? TYR B 71 ? LEU B 56 TYR B 71 1 ? 16 HELX_P HELX_P9 AA9 ASN B 74 ? ARG B 107 ? ASN B 74 ARG B 107 1 ? 34 HELX_P HELX_P10 AB1 SER B 108 ? ASN B 113 ? SER B 108 ASN B 113 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 128 ? PRO A 132 ? ILE A 128 PRO A 132 AA1 2 LEU A 119 ? PRO A 123 ? LEU A 119 PRO A 123 AA1 3 GLU A 167 ? THR A 172 ? GLU A 167 THR A 172 AA1 4 THR A 175 ? SER A 184 ? THR A 175 SER A 184 AA1 5 PHE A 193 ? GLY A 202 ? PHE A 193 GLY A 202 AA1 6 VAL A 139 ? LEU A 145 ? VAL A 139 LEU A 145 AA1 7 HIS A 148 ? ILE A 151 ? HIS A 148 ILE A 151 AA1 8 HIS A 154 ? ARG A 158 ? HIS A 154 ARG A 158 AA2 1 ILE B 128 ? PRO B 132 ? ILE B 128 PRO B 132 AA2 2 LEU B 119 ? PRO B 123 ? LEU B 119 PRO B 123 AA2 3 GLU B 167 ? THR B 172 ? GLU B 167 THR B 172 AA2 4 THR B 175 ? SER B 184 ? THR B 175 SER B 184 AA2 5 PHE B 193 ? GLY B 202 ? PHE B 193 GLY B 202 AA2 6 VAL B 139 ? LEU B 145 ? VAL B 139 LEU B 145 AA2 7 HIS B 148 ? ILE B 151 ? HIS B 148 ILE B 151 AA2 8 HIS B 154 ? ARG B 158 ? HIS B 154 ARG B 158 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 129 ? O LEU A 129 N VAL A 122 ? N VAL A 122 AA1 2 3 N ASN A 121 ? N ASN A 121 O THR A 169 ? O THR A 169 AA1 3 4 N ILE A 168 ? N ILE A 168 O TYR A 179 ? O TYR A 179 AA1 4 5 N TYR A 178 ? N TYR A 178 O TYR A 199 ? O TYR A 199 AA1 5 6 O ALA A 194 ? O ALA A 194 N ALA A 142 ? N ALA A 142 AA1 6 7 N LEU A 145 ? N LEU A 145 O HIS A 148 ? O HIS A 148 AA1 7 8 N ILE A 151 ? N ILE A 151 O HIS A 154 ? O HIS A 154 AA2 1 2 O LEU B 129 ? O LEU B 129 N VAL B 122 ? N VAL B 122 AA2 2 3 N ASN B 121 ? N ASN B 121 O THR B 169 ? O THR B 169 AA2 3 4 N ILE B 168 ? N ILE B 168 O TYR B 179 ? O TYR B 179 AA2 4 5 N TYR B 178 ? N TYR B 178 O TYR B 199 ? O TYR B 199 AA2 5 6 O ALA B 194 ? O ALA B 194 N ALA B 142 ? N ALA B 142 AA2 6 7 N LEU B 145 ? N LEU B 145 O HIS B 148 ? O HIS B 148 AA2 7 8 N ILE B 151 ? N ILE B 151 O HIS B 154 ? O HIS B 154 # _atom_sites.entry_id 8CTK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 SER 4 4 ? ? ? A . n A 1 5 ASN 5 5 ? ? ? A . n A 1 6 GLY 6 6 ? ? ? A . n A 1 7 THR 7 7 ? ? ? A . n A 1 8 ILE 8 8 ? ? ? A . n A 1 9 THR 9 9 ? ? ? A . n A 1 10 VAL 10 10 ? ? ? A . n A 1 11 GLU 11 11 ? ? ? A . n A 1 12 GLU 12 12 ? ? ? A . n A 1 13 LEU 13 13 ? ? ? A . n A 1 14 LYS 14 14 ? ? ? A . n A 1 15 LYS 15 15 ? ? ? A . n A 1 16 LEU 16 16 ? ? ? A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 TRP 20 20 20 TRP TRP A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 TRP 55 55 55 TRP TRP A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 MET 84 84 84 MET MET A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 CYS 86 86 86 CYS CYS A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 MET 91 91 91 MET MET A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 MET 109 109 109 MET MET A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 ILE 140 140 140 ILE ILE A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 VAL 143 143 143 VAL VAL A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 HIS 148 148 148 HIS HIS A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ARG 150 150 150 ARG ARG A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 CYS 159 159 159 CYS CYS A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 LYS 166 166 166 LYS LYS A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 SER 173 173 173 SER SER A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 TYR 178 178 178 TYR TYR A . n A 1 179 TYR 179 179 179 TYR TYR A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 ALA 183 183 183 ALA ALA A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 GLN 185 185 185 GLN GLN A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 SER 191 191 191 SER SER A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 TYR 196 196 196 TYR TYR A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 TYR 199 199 199 TYR TYR A . n A 1 200 ARG 200 200 200 ARG ARG A . n A 1 201 ILE 201 201 201 ILE ILE A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ASN 203 203 203 ASN ASN A . n A 1 204 TYR 204 204 204 TYR TYR A . n A 1 205 LYS 205 205 ? ? ? A . n A 1 206 LEU 206 206 ? ? ? A . n A 1 207 ASN 207 207 ? ? ? A . n A 1 208 THR 208 208 ? ? ? A . n A 1 209 ASP 209 209 ? ? ? A . n A 1 210 HIS 210 210 ? ? ? A . n A 1 211 SER 211 211 ? ? ? A . n A 1 212 SER 212 212 ? ? ? A . n A 1 213 SER 213 213 ? ? ? A . n A 1 214 SER 214 214 ? ? ? A . n A 1 215 ASP 215 215 ? ? ? A . n A 1 216 ASN 216 216 ? ? ? A . n A 1 217 ILE 217 217 ? ? ? A . n A 1 218 ALA 218 218 ? ? ? A . n A 1 219 LEU 219 219 ? ? ? A . n A 1 220 LEU 220 220 ? ? ? A . n A 1 221 VAL 221 221 ? ? ? A . n A 1 222 GLN 222 222 ? ? ? A . n A 1 223 SER 223 223 ? ? ? A . n A 1 224 ASN 224 224 ? ? ? A . n A 1 225 SER 225 225 ? ? ? A . n A 1 226 LEU 226 226 ? ? ? A . n A 1 227 GLU 227 227 ? ? ? A . n A 1 228 VAL 228 228 ? ? ? A . n A 1 229 LEU 229 229 ? ? ? A . n A 1 230 PHE 230 230 ? ? ? A . n A 1 231 GLN 231 231 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 ? ? ? B . n B 1 3 ASP 3 3 ? ? ? B . n B 1 4 SER 4 4 ? ? ? B . n B 1 5 ASN 5 5 ? ? ? B . n B 1 6 GLY 6 6 ? ? ? B . n B 1 7 THR 7 7 ? ? ? B . n B 1 8 ILE 8 8 ? ? ? B . n B 1 9 THR 9 9 ? ? ? B . n B 1 10 VAL 10 10 ? ? ? B . n B 1 11 GLU 11 11 ? ? ? B . n B 1 12 GLU 12 12 ? ? ? B . n B 1 13 LEU 13 13 ? ? ? B . n B 1 14 LYS 14 14 ? ? ? B . n B 1 15 LYS 15 15 ? ? ? B . n B 1 16 LEU 16 16 ? ? ? B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 TRP 20 20 20 TRP TRP B . n B 1 21 ASN 21 21 21 ASN ASN B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 ILE 24 24 24 ILE ILE B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 PHE 26 26 26 PHE PHE B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 PHE 28 28 28 PHE PHE B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 THR 30 30 30 THR THR B . n B 1 31 TRP 31 31 31 TRP TRP B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 CYS 33 33 33 CYS CYS B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 GLN 36 36 36 GLN GLN B . n B 1 37 PHE 37 37 37 PHE PHE B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 TYR 39 39 39 TYR TYR B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 ARG 44 44 44 ARG ARG B . n B 1 45 PHE 45 45 45 PHE PHE B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 TYR 47 47 47 TYR TYR B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 ILE 49 49 49 ILE ILE B . n B 1 50 LYS 50 50 50 LYS LYS B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 ILE 52 52 52 ILE ILE B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 TRP 55 55 55 TRP TRP B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 TRP 58 58 58 TRP TRP B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 CYS 64 64 64 CYS CYS B . n B 1 65 PHE 65 65 65 PHE PHE B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 ALA 68 68 68 ALA ALA B . n B 1 69 ALA 69 69 69 ALA ALA B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 TYR 71 71 71 TYR TYR B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 ILE 73 73 73 ILE ILE B . n B 1 74 ASN 74 74 74 ASN ASN B . n B 1 75 TRP 75 75 75 TRP TRP B . n B 1 76 ILE 76 76 76 ILE ILE B . n B 1 77 THR 77 77 77 THR THR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 GLY 79 79 79 GLY GLY B . n B 1 80 ILE 80 80 80 ILE ILE B . n B 1 81 ALA 81 81 81 ALA ALA B . n B 1 82 ILE 82 82 82 ILE ILE B . n B 1 83 ALA 83 83 83 ALA ALA B . n B 1 84 MET 84 84 84 MET MET B . n B 1 85 ALA 85 85 85 ALA ALA B . n B 1 86 CYS 86 86 86 CYS CYS B . n B 1 87 LEU 87 87 87 LEU LEU B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 GLY 89 89 89 GLY GLY B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 MET 91 91 91 MET MET B . n B 1 92 TRP 92 92 92 TRP TRP B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 SER 94 94 94 SER SER B . n B 1 95 TYR 95 95 95 TYR TYR B . n B 1 96 PHE 96 96 96 PHE PHE B . n B 1 97 ILE 97 97 97 ILE ILE B . n B 1 98 ALA 98 98 98 ALA ALA B . n B 1 99 SER 99 99 99 SER SER B . n B 1 100 PHE 100 100 100 PHE PHE B . n B 1 101 ARG 101 101 101 ARG ARG B . n B 1 102 LEU 102 102 102 LEU LEU B . n B 1 103 PHE 103 103 103 PHE PHE B . n B 1 104 ALA 104 104 104 ALA ALA B . n B 1 105 ARG 105 105 105 ARG ARG B . n B 1 106 THR 106 106 106 THR THR B . n B 1 107 ARG 107 107 107 ARG ARG B . n B 1 108 SER 108 108 108 SER SER B . n B 1 109 MET 109 109 109 MET MET B . n B 1 110 TRP 110 110 110 TRP TRP B . n B 1 111 SER 111 111 111 SER SER B . n B 1 112 PHE 112 112 112 PHE PHE B . n B 1 113 ASN 113 113 113 ASN ASN B . n B 1 114 PRO 114 114 114 PRO PRO B . n B 1 115 GLU 115 115 115 GLU GLU B . n B 1 116 THR 116 116 116 THR THR B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 ILE 118 118 118 ILE ILE B . n B 1 119 LEU 119 119 119 LEU LEU B . n B 1 120 LEU 120 120 120 LEU LEU B . n B 1 121 ASN 121 121 121 ASN ASN B . n B 1 122 VAL 122 122 122 VAL VAL B . n B 1 123 PRO 123 123 123 PRO PRO B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 HIS 125 125 125 HIS HIS B . n B 1 126 GLY 126 126 126 GLY GLY B . n B 1 127 THR 127 127 127 THR THR B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 THR 130 130 130 THR THR B . n B 1 131 ARG 131 131 131 ARG ARG B . n B 1 132 PRO 132 132 132 PRO PRO B . n B 1 133 LEU 133 133 133 LEU LEU B . n B 1 134 LEU 134 134 134 LEU LEU B . n B 1 135 GLU 135 135 135 GLU GLU B . n B 1 136 SER 136 136 136 SER SER B . n B 1 137 GLU 137 137 137 GLU GLU B . n B 1 138 LEU 138 138 138 LEU LEU B . n B 1 139 VAL 139 139 139 VAL VAL B . n B 1 140 ILE 140 140 140 ILE ILE B . n B 1 141 GLY 141 141 141 GLY GLY B . n B 1 142 ALA 142 142 142 ALA ALA B . n B 1 143 VAL 143 143 143 VAL VAL B . n B 1 144 ILE 144 144 144 ILE ILE B . n B 1 145 LEU 145 145 145 LEU LEU B . n B 1 146 ARG 146 146 146 ARG ARG B . n B 1 147 GLY 147 147 147 GLY GLY B . n B 1 148 HIS 148 148 148 HIS HIS B . n B 1 149 LEU 149 149 149 LEU LEU B . n B 1 150 ARG 150 150 150 ARG ARG B . n B 1 151 ILE 151 151 151 ILE ILE B . n B 1 152 ALA 152 152 152 ALA ALA B . n B 1 153 GLY 153 153 153 GLY GLY B . n B 1 154 HIS 154 154 154 HIS HIS B . n B 1 155 HIS 155 155 155 HIS HIS B . n B 1 156 LEU 156 156 156 LEU LEU B . n B 1 157 GLY 157 157 157 GLY GLY B . n B 1 158 ARG 158 158 158 ARG ARG B . n B 1 159 CYS 159 159 159 CYS CYS B . n B 1 160 ASP 160 160 160 ASP ASP B . n B 1 161 ILE 161 161 161 ILE ILE B . n B 1 162 LYS 162 162 162 LYS LYS B . n B 1 163 ASP 163 163 163 ASP ASP B . n B 1 164 LEU 164 164 164 LEU LEU B . n B 1 165 PRO 165 165 165 PRO PRO B . n B 1 166 LYS 166 166 166 LYS LYS B . n B 1 167 GLU 167 167 167 GLU GLU B . n B 1 168 ILE 168 168 168 ILE ILE B . n B 1 169 THR 169 169 169 THR THR B . n B 1 170 VAL 170 170 170 VAL VAL B . n B 1 171 ALA 171 171 171 ALA ALA B . n B 1 172 THR 172 172 172 THR THR B . n B 1 173 SER 173 173 173 SER SER B . n B 1 174 ARG 174 174 174 ARG ARG B . n B 1 175 THR 175 175 175 THR THR B . n B 1 176 LEU 176 176 176 LEU LEU B . n B 1 177 SER 177 177 177 SER SER B . n B 1 178 TYR 178 178 178 TYR TYR B . n B 1 179 TYR 179 179 179 TYR TYR B . n B 1 180 LYS 180 180 180 LYS LYS B . n B 1 181 LEU 181 181 181 LEU LEU B . n B 1 182 GLY 182 182 182 GLY GLY B . n B 1 183 ALA 183 183 183 ALA ALA B . n B 1 184 SER 184 184 184 SER SER B . n B 1 185 GLN 185 185 185 GLN GLN B . n B 1 186 ARG 186 186 186 ARG ARG B . n B 1 187 VAL 187 187 187 VAL VAL B . n B 1 188 ALA 188 188 188 ALA ALA B . n B 1 189 GLY 189 189 189 GLY GLY B . n B 1 190 ASP 190 190 190 ASP ASP B . n B 1 191 SER 191 191 191 SER SER B . n B 1 192 GLY 192 192 192 GLY GLY B . n B 1 193 PHE 193 193 193 PHE PHE B . n B 1 194 ALA 194 194 194 ALA ALA B . n B 1 195 ALA 195 195 195 ALA ALA B . n B 1 196 TYR 196 196 196 TYR TYR B . n B 1 197 SER 197 197 197 SER SER B . n B 1 198 ARG 198 198 198 ARG ARG B . n B 1 199 TYR 199 199 199 TYR TYR B . n B 1 200 ARG 200 200 200 ARG ARG B . n B 1 201 ILE 201 201 201 ILE ILE B . n B 1 202 GLY 202 202 202 GLY GLY B . n B 1 203 ASN 203 203 203 ASN ASN B . n B 1 204 TYR 204 204 204 TYR TYR B . n B 1 205 LYS 205 205 ? ? ? B . n B 1 206 LEU 206 206 ? ? ? B . n B 1 207 ASN 207 207 ? ? ? B . n B 1 208 THR 208 208 ? ? ? B . n B 1 209 ASP 209 209 ? ? ? B . n B 1 210 HIS 210 210 ? ? ? B . n B 1 211 SER 211 211 ? ? ? B . n B 1 212 SER 212 212 ? ? ? B . n B 1 213 SER 213 213 ? ? ? B . n B 1 214 SER 214 214 ? ? ? B . n B 1 215 ASP 215 215 ? ? ? B . n B 1 216 ASN 216 216 ? ? ? B . n B 1 217 ILE 217 217 ? ? ? B . n B 1 218 ALA 218 218 ? ? ? B . n B 1 219 LEU 219 219 ? ? ? B . n B 1 220 LEU 220 220 ? ? ? B . n B 1 221 VAL 221 221 ? ? ? B . n B 1 222 GLN 222 222 ? ? ? B . n B 1 223 SER 223 223 ? ? ? B . n B 1 224 ASN 224 224 ? ? ? B . n B 1 225 SER 225 225 ? ? ? B . n B 1 226 LEU 226 226 ? ? ? B . n B 1 227 GLU 227 227 ? ? ? B . n B 1 228 VAL 228 228 ? ? ? B . n B 1 229 LEU 229 229 ? ? ? B . n B 1 230 PHE 230 230 ? ? ? B . n B 1 231 GLN 231 231 ? ? ? B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email brohawn@berkeley.edu _pdbx_contact_author.name_first Stephen _pdbx_contact_author.name_last Brohawn _pdbx_contact_author.name_mi G _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-6768-3406 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-22 2 'Structure model' 1 1 2022-11-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? phenix.real_space_refine ? ? ? 1.20.1_4487 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 # _em_3d_fitting.entry_id 8CTK _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 8CTK _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 64966 _em_3d_reconstruction.resolution 3.52 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'M protein' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 8CTK _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 1200 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'blot force 1, wait time 5s, blot time 3s' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 8CTK _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 8CTK _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8CTK _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 71 ? ? -92.86 35.67 2 1 PHE A 193 ? ? -161.47 117.15 3 1 TYR A 199 ? ? -95.35 -61.74 4 1 TYR B 71 ? ? -92.86 35.67 5 1 PHE B 193 ? ? -161.47 117.15 6 1 TYR B 199 ? ? -95.35 -61.74 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A SER 4 ? A SER 4 5 1 Y 1 A ASN 5 ? A ASN 5 6 1 Y 1 A GLY 6 ? A GLY 6 7 1 Y 1 A THR 7 ? A THR 7 8 1 Y 1 A ILE 8 ? A ILE 8 9 1 Y 1 A THR 9 ? A THR 9 10 1 Y 1 A VAL 10 ? A VAL 10 11 1 Y 1 A GLU 11 ? A GLU 11 12 1 Y 1 A GLU 12 ? A GLU 12 13 1 Y 1 A LEU 13 ? A LEU 13 14 1 Y 1 A LYS 14 ? A LYS 14 15 1 Y 1 A LYS 15 ? A LYS 15 16 1 Y 1 A LEU 16 ? A LEU 16 17 1 Y 1 A LYS 205 ? A LYS 205 18 1 Y 1 A LEU 206 ? A LEU 206 19 1 Y 1 A ASN 207 ? A ASN 207 20 1 Y 1 A THR 208 ? A THR 208 21 1 Y 1 A ASP 209 ? A ASP 209 22 1 Y 1 A HIS 210 ? A HIS 210 23 1 Y 1 A SER 211 ? A SER 211 24 1 Y 1 A SER 212 ? A SER 212 25 1 Y 1 A SER 213 ? A SER 213 26 1 Y 1 A SER 214 ? A SER 214 27 1 Y 1 A ASP 215 ? A ASP 215 28 1 Y 1 A ASN 216 ? A ASN 216 29 1 Y 1 A ILE 217 ? A ILE 217 30 1 Y 1 A ALA 218 ? A ALA 218 31 1 Y 1 A LEU 219 ? A LEU 219 32 1 Y 1 A LEU 220 ? A LEU 220 33 1 Y 1 A VAL 221 ? A VAL 221 34 1 Y 1 A GLN 222 ? A GLN 222 35 1 Y 1 A SER 223 ? A SER 223 36 1 Y 1 A ASN 224 ? A ASN 224 37 1 Y 1 A SER 225 ? A SER 225 38 1 Y 1 A LEU 226 ? A LEU 226 39 1 Y 1 A GLU 227 ? A GLU 227 40 1 Y 1 A VAL 228 ? A VAL 228 41 1 Y 1 A LEU 229 ? A LEU 229 42 1 Y 1 A PHE 230 ? A PHE 230 43 1 Y 1 A GLN 231 ? A GLN 231 44 1 Y 1 B MET 1 ? B MET 1 45 1 Y 1 B ALA 2 ? B ALA 2 46 1 Y 1 B ASP 3 ? B ASP 3 47 1 Y 1 B SER 4 ? B SER 4 48 1 Y 1 B ASN 5 ? B ASN 5 49 1 Y 1 B GLY 6 ? B GLY 6 50 1 Y 1 B THR 7 ? B THR 7 51 1 Y 1 B ILE 8 ? B ILE 8 52 1 Y 1 B THR 9 ? B THR 9 53 1 Y 1 B VAL 10 ? B VAL 10 54 1 Y 1 B GLU 11 ? B GLU 11 55 1 Y 1 B GLU 12 ? B GLU 12 56 1 Y 1 B LEU 13 ? B LEU 13 57 1 Y 1 B LYS 14 ? B LYS 14 58 1 Y 1 B LYS 15 ? B LYS 15 59 1 Y 1 B LEU 16 ? B LEU 16 60 1 Y 1 B LYS 205 ? B LYS 205 61 1 Y 1 B LEU 206 ? B LEU 206 62 1 Y 1 B ASN 207 ? B ASN 207 63 1 Y 1 B THR 208 ? B THR 208 64 1 Y 1 B ASP 209 ? B ASP 209 65 1 Y 1 B HIS 210 ? B HIS 210 66 1 Y 1 B SER 211 ? B SER 211 67 1 Y 1 B SER 212 ? B SER 212 68 1 Y 1 B SER 213 ? B SER 213 69 1 Y 1 B SER 214 ? B SER 214 70 1 Y 1 B ASP 215 ? B ASP 215 71 1 Y 1 B ASN 216 ? B ASN 216 72 1 Y 1 B ILE 217 ? B ILE 217 73 1 Y 1 B ALA 218 ? B ALA 218 74 1 Y 1 B LEU 219 ? B LEU 219 75 1 Y 1 B LEU 220 ? B LEU 220 76 1 Y 1 B VAL 221 ? B VAL 221 77 1 Y 1 B GLN 222 ? B GLN 222 78 1 Y 1 B SER 223 ? B SER 223 79 1 Y 1 B ASN 224 ? B ASN 224 80 1 Y 1 B SER 225 ? B SER 225 81 1 Y 1 B LEU 226 ? B LEU 226 82 1 Y 1 B GLU 227 ? B GLU 227 83 1 Y 1 B VAL 228 ? B VAL 228 84 1 Y 1 B LEU 229 ? B LEU 229 85 1 Y 1 B PHE 230 ? B PHE 230 86 1 Y 1 B GLN 231 ? B GLN 231 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 20 mM C8H18N2O4S HEPES 1 2 150 mM KCl 'potassium chloride' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.052 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 2697049 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Severe acute respiratory syndrome coronavirus 2' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? 1 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? CTFFIND ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? cryoSPARC 3.1 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? cryoSPARC 3.1 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 1.3 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM123496 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 #