data_8CTO # _entry.id 8CTO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8CTO pdb_00008cto 10.2210/pdb8cto/pdb WWPDB D_1000265359 ? ? BMRB 31021 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type BMRB 'A-CC shifts' 30998 unspecified PDB 'A-CC conformation' 7UBD unspecified BMRB 'Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (B-CT conformation)' 31021 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8CTO _pdbx_database_status.recvd_initial_deposition_date 2022-05-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ramelot, T.A.' 1 0000-0002-0335-1573 'Tejero, R.' 2 0000-0003-2504-5988 'Montelione, G.T.' 3 0000-0002-9440-3059 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Cell _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1097-4172 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 185 _citation.language ? _citation.page_first 3520 _citation.page_last 3532.e26 _citation.title 'Accurate de novo design of membrane-traversing macrocycles.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.cell.2022.07.019 _citation.pdbx_database_id_PubMed 36041435 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bhardwaj, G.' 1 ? primary ;O'Connor, J. ; 2 ? primary 'Rettie, S.' 3 ? primary 'Huang, Y.H.' 4 ? primary 'Ramelot, T.A.' 5 ? primary 'Mulligan, V.K.' 6 ? primary 'Alpkilic, G.G.' 7 ? primary 'Palmer, J.' 8 ? primary 'Bera, A.K.' 9 ? primary 'Bick, M.J.' 10 ? primary 'Di Piazza, M.' 11 ? primary 'Li, X.' 12 ? primary 'Hosseinzadeh, P.' 13 ? primary 'Craven, T.W.' 14 ? primary 'Tejero, R.' 15 ? primary 'Lauko, A.' 16 ? primary 'Choi, R.' 17 ? primary 'Glynn, C.' 18 ? primary 'Dong, L.' 19 ? primary 'Griffin, R.' 20 ? primary 'van Voorhis, W.C.' 21 ? primary 'Rodriguez, J.' 22 ? primary 'Stewart, L.' 23 ? primary 'Montelione, G.T.' 24 ? primary 'Craik, D.' 25 ? primary 'Baker, D.' 26 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Cyclic peptide D8.31 DAL-DPR-MLU-DVA-DAL-DPR-MLU-DVA' _entity.formula_weight 807.030 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(D)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DAL)(DPR)(MLU)(DVA)(DAL)(DPR)(MLU)(DVA)' _entity_poly.pdbx_seq_one_letter_code_can APXVAPXV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DAL n 1 2 DPR n 1 3 MLU n 1 4 DVA n 1 5 DAL n 1 6 DPR n 1 7 MLU n 1 8 DVA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8CTO _struct_ref.pdbx_db_accession 8CTO _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8CTO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8CTO _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130 DVA 'D-peptide linking' . D-VALINE ? 'C5 H11 N O2' 117.146 MLU 'D-peptide linking' . N-methyl-D-leucine ? 'C7 H15 N O2' 145.199 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '1D 1H' 1 isotropic 2 1 1 '2D NOESY' 1 isotropic 3 1 1 '2D ROESY' 1 isotropic 4 1 1 '2D TOCSY' 1 isotropic 5 1 1 '2D DQF-COSY' 1 isotropic 6 1 1 '2D 1H-13C HSQC-ed' 1 isotropic 7 1 1 '2D 1H-15N HSQC' 1 isotropic 8 1 1 '2D 1H-13C HMBC' 1 isotropic 9 1 1 '2D 1H-13C HSQC-TOCSY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 0.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength NA _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label conditions_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err 1 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '6 mg/mL peptide, 0.03 % TMS, DMSO' _pdbx_nmr_sample_details.solvent_system DMSO _pdbx_nmr_sample_details.label peptide _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details D8.31-DMSO # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details 'CP-TCI - Pharaoh - RPI' # _pdbx_nmr_refine.entry_id 8CTO _pdbx_nmr_refine.method na _pdbx_nmr_refine.details ;This is conformation B (CT) of the 8-residue cyclic peptide present in the same NMR sample in d6-DMSO. A-CC conformation (50%) has cis MLU-3 and cis MLU-7 (pdb 7UBD) and B-CT (50%) conformation has cis MLU-3 and trans MLU-7 ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 8CTO _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8CTO _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria medoid # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA 3.98.13 'Guntert , Mumenthaler, and Wuthrich' 2 'peak picking' NMRFAM-SPARKY 1.370 'Lee, Tonelli, Markley' 3 processing NMRPipe 10.9 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 4 'data analysis' TopSpin 4.0.9 'Bruker Biospin' 5 'data analysis' PdbStat 5.21.6 'Tejero, Snyder, Mao, Aramini, Montelione' 6 'structure calculation' CYANA 3.98.13 'Guntert , Mumenthaler, and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8CTO _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8CTO _struct.title 'Solution NMR structure of 8-residue Rosetta-designed cyclic peptide D8.31 in d6-DMSO with cis/trans switching (B-CT conformation)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8CTO _struct_keywords.text 'cyclic peptide, non natural amino acids, cis/trans, switch peptides, de novo design, membrane permeability, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DAL 1 C ? ? ? 1_555 A DPR 2 N ? ? A DAL 1 A DPR 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A DAL 1 N ? ? ? 1_555 A DVA 8 C ? ? A DAL 1 A DVA 8 1_555 ? ? ? ? ? ? ? 1.382 ? ? covale3 covale one ? A DPR 2 C ? ? ? 1_555 A MLU 3 N ? ? A DPR 2 A MLU 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? A MLU 3 C ? ? ? 1_555 A DVA 4 N ? ? A MLU 3 A DVA 4 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A DVA 4 C ? ? ? 1_555 A DAL 5 N ? ? A DVA 4 A DAL 5 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A DAL 5 C ? ? ? 1_555 A DPR 6 N ? ? A DAL 5 A DPR 6 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale one ? A DPR 6 C ? ? ? 1_555 A MLU 7 N ? ? A DPR 6 A MLU 7 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? A MLU 7 C ? ? ? 1_555 A DVA 8 N ? ? A MLU 7 A DVA 8 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 1 -0.01 2 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 2 0.02 3 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 3 -0.03 4 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 4 0.00 5 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 5 0.00 6 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 6 -0.07 7 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 7 0.02 8 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 8 -0.05 9 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 9 -0.01 10 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 10 0.09 11 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 11 0.00 12 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 12 -0.01 13 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 13 0.13 14 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 14 0.08 15 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 15 -0.06 16 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 16 -0.03 17 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 17 -0.03 18 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 18 -0.01 19 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 19 0.03 20 DPR 2 A . ? DPR 2 A MLU 3 A ? MLU 3 A 20 0.06 # _atom_sites.entry_id 8CTO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DAL 1 1 1 DAL DAL A . n A 1 2 DPR 2 2 2 DPR DPR A . n A 1 3 MLU 3 3 3 MLU MLU A . n A 1 4 DVA 4 4 4 DVA DVA A . n A 1 5 DAL 5 5 5 DAL DAL A . n A 1 6 DPR 6 6 6 DPR DPR A . n A 1 7 MLU 7 7 7 MLU MLU A . n A 1 8 DVA 8 8 8 DVA DVA A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email monteg3@rpi.edu _pdbx_contact_author.name_first Gaetano _pdbx_contact_author.name_last Montelione _pdbx_contact_author.name_mi T _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-9440-3059 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-09-14 2 'Structure model' 1 1 2022-09-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # _pdbx_entry_details.entry_id 8CTO _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 peptide 6 ? mg/mL 'natural abundance' 1 TMS 0.03 ? % 'natural abundance' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A DPR 6 ? ? CA A DPR 6 ? ? C A DPR 6 ? ? 126.78 111.70 15.08 2.10 N 2 4 CB A DPR 6 ? ? CA A DPR 6 ? ? C A DPR 6 ? ? 124.53 111.70 12.83 2.10 N 3 8 CB A DPR 6 ? ? CA A DPR 6 ? ? C A DPR 6 ? ? 126.43 111.70 14.73 2.10 N 4 9 CB A DPR 6 ? ? CA A DPR 6 ? ? C A DPR 6 ? ? 126.56 111.70 14.86 2.10 N 5 12 CB A DPR 6 ? ? CA A DPR 6 ? ? C A DPR 6 ? ? 126.27 111.70 14.57 2.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MLU A 3 ? ? 97.17 -38.80 2 1 DPR A 6 ? ? 47.72 83.93 3 2 DPR A 6 ? ? 51.99 -174.01 4 2 MLU A 7 ? ? -77.40 63.88 5 3 DPR A 2 ? ? 48.04 -161.25 6 3 DPR A 6 ? ? 50.35 -170.47 7 3 MLU A 7 ? ? -76.24 62.43 8 4 DPR A 2 ? ? 48.35 -159.43 9 4 MLU A 3 ? ? 103.24 -40.20 10 5 DVA A 4 ? ? 109.43 60.83 11 5 MLU A 7 ? ? -74.29 63.75 12 6 MLU A 7 ? ? 13.56 75.51 13 8 DPR A 2 ? ? 49.18 -159.22 14 8 MLU A 3 ? ? 109.76 -50.26 15 8 DPR A 6 ? ? 35.40 81.41 16 9 MLU A 3 ? ? 103.76 -46.51 17 9 DPR A 6 ? ? 35.51 81.75 18 10 MLU A 7 ? ? 17.57 73.01 19 11 DPR A 2 ? ? 47.43 -161.81 20 11 DPR A 6 ? ? 104.48 -79.37 21 12 DPR A 2 ? ? 49.51 -160.90 22 12 MLU A 3 ? ? 105.29 -48.53 23 12 DPR A 6 ? ? 35.37 81.10 24 13 MLU A 3 ? ? 108.23 -40.91 25 13 MLU A 7 ? ? 7.85 77.85 26 14 MLU A 3 ? ? 106.97 -57.27 27 14 DPR A 6 ? ? 29.90 -95.50 28 14 MLU A 7 ? ? -166.83 77.37 29 15 MLU A 3 ? ? 108.18 -58.44 30 15 DVA A 4 ? ? 137.20 38.99 31 15 MLU A 7 ? ? 7.77 76.41 32 16 DPR A 2 ? ? 48.48 -160.29 33 16 MLU A 3 ? ? 106.17 -52.64 34 16 MLU A 7 ? ? 165.68 -71.22 35 17 MLU A 3 ? ? 107.04 -57.11 36 17 DPR A 6 ? ? 29.90 -95.51 37 17 MLU A 7 ? ? -166.88 77.46 38 18 MLU A 3 ? ? 109.97 -43.53 39 18 DPR A 6 ? ? 27.02 59.37 40 18 MLU A 7 ? ? 12.24 75.74 41 19 DPR A 6 ? ? 26.99 59.13 42 19 MLU A 7 ? ? 12.21 75.68 43 20 DPR A 2 ? ? 47.40 -162.00 44 20 MLU A 3 ? ? 108.93 -60.39 45 20 MLU A 7 ? ? 166.01 -72.03 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R35-GM141818 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details 'cyclic peptide with two conformations observed in noesy data. A-CC (50%) and B-CT (50%). This one is B-CT conformation.' #