HEADER TRANSCRIPTION 18-MAY-22 8CV7 TITLE PEPTIDE 2.2E IN COMPLEX WITH BRD2-BD2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 3 OF BROMODOMAIN-CONTAINING PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BD2 (UNP RESIDUES 300-408); COMPND 5 SYNONYM: O27.1.1,REALLY INTERESTING NEW GENE 3 PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE 2.2E; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD2, KIAA9001, RING3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS BROMODOMAIN CYCLIC PEPTIDES ACETYL-LYSINE, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.FRANCK,J.P.MACKAY REVDAT 4 06-DEC-23 8CV7 1 JRNL REVDAT 3 15-NOV-23 8CV7 1 REMARK REVDAT 2 25-OCT-23 8CV7 1 REMARK REVDAT 1 24-MAY-23 8CV7 0 JRNL AUTH C.FRANCK,K.PATEL,L.J.WALPORT,M.CHRISTIE,A.NORMAN, JRNL AUTH 2 T.PASSIOURA,H.SUGA,R.J.PAYNE,J.P.MACKAY JRNL TITL DISCOVERY AND CHARACTERIZATION OF CYCLIC PEPTIDES SELECTIVE JRNL TITL 2 FOR THE C-TERMINAL BROMODOMAINS OF BET FAMILY PROTEINS. JRNL REF STRUCTURE V. 31 912 2023 JRNL REFN ISSN 0969-2126 JRNL PMID 37269828 JRNL DOI 10.1016/J.STR.2023.05.009 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 39545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.450 REMARK 3 FREE R VALUE TEST SET COUNT : 1758 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1200 - 3.7600 0.99 2997 174 0.1567 0.1649 REMARK 3 2 3.7600 - 2.9900 0.99 2920 192 0.1691 0.2007 REMARK 3 3 2.9900 - 2.6100 0.99 2968 121 0.1827 0.2080 REMARK 3 4 2.6100 - 2.3700 0.99 2922 140 0.1863 0.2231 REMARK 3 5 2.3700 - 2.2000 0.98 2895 140 0.1748 0.2083 REMARK 3 6 2.2000 - 2.0700 0.98 2926 117 0.1757 0.1980 REMARK 3 7 2.0700 - 1.9700 0.98 2909 121 0.1783 0.2148 REMARK 3 8 1.9700 - 1.8800 0.98 2912 131 0.1822 0.1848 REMARK 3 9 1.8800 - 1.8100 0.98 2866 133 0.1837 0.2199 REMARK 3 10 1.8100 - 1.7500 0.97 2880 126 0.1776 0.2228 REMARK 3 11 1.7500 - 1.6900 0.97 2864 121 0.1838 0.2356 REMARK 3 12 1.6900 - 1.6400 0.97 2878 118 0.1952 0.2209 REMARK 3 13 1.6400 - 1.6000 0.97 2850 124 0.1991 0.2390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.138 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.088 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.88 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2123 REMARK 3 ANGLE : 1.025 2860 REMARK 3 CHIRALITY : 0.054 279 REMARK 3 PLANARITY : 0.009 365 REMARK 3 DIHEDRAL : 12.363 296 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 347 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1104 14.4739 -14.2120 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.0968 REMARK 3 T33: 0.1448 T12: 0.0011 REMARK 3 T13: 0.0034 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 2.3625 L22: 1.0003 REMARK 3 L33: 4.0315 L12: 0.2353 REMARK 3 L13: 2.4367 L23: 0.3390 REMARK 3 S TENSOR REMARK 3 S11: -0.0110 S12: -0.0137 S13: 0.0676 REMARK 3 S21: -0.0422 S22: -0.0100 S23: -0.0352 REMARK 3 S31: -0.0554 S32: 0.0013 S33: 0.0272 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 396 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5338 13.7765 -26.2269 REMARK 3 T TENSOR REMARK 3 T11: 0.2451 T22: 0.3245 REMARK 3 T33: 0.1789 T12: -0.0342 REMARK 3 T13: 0.0329 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 4.4979 L22: 6.5853 REMARK 3 L33: 6.7860 L12: -0.4364 REMARK 3 L13: -2.2101 L23: 0.3658 REMARK 3 S TENSOR REMARK 3 S11: 0.0721 S12: 0.8274 S13: 0.1256 REMARK 3 S21: -0.9297 S22: 0.0262 S23: -0.4203 REMARK 3 S31: -0.3762 S32: 0.6716 S33: -0.1799 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 411 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2901 7.9702 -10.3933 REMARK 3 T TENSOR REMARK 3 T11: 0.1223 T22: 0.0887 REMARK 3 T33: 0.1713 T12: -0.0052 REMARK 3 T13: -0.0333 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.2763 L22: 2.4719 REMARK 3 L33: 6.2204 L12: -0.1528 REMARK 3 L13: 1.8807 L23: 0.8074 REMARK 3 S TENSOR REMARK 3 S11: 0.2554 S12: 0.0866 S13: -0.1432 REMARK 3 S21: 0.0287 S22: 0.0684 S23: -0.0802 REMARK 3 S31: 0.4409 S32: -0.0045 S33: -0.3111 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 434 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2437 3.4928 -14.8833 REMARK 3 T TENSOR REMARK 3 T11: 0.1787 T22: 0.1008 REMARK 3 T33: 0.1747 T12: -0.0264 REMARK 3 T13: -0.0505 T23: 0.0378 REMARK 3 L TENSOR REMARK 3 L11: 2.6006 L22: 3.7785 REMARK 3 L33: 4.4850 L12: 0.1816 REMARK 3 L13: 1.2030 L23: 1.8912 REMARK 3 S TENSOR REMARK 3 S11: 0.2041 S12: -0.0053 S13: -0.3237 REMARK 3 S21: -0.0928 S22: -0.0495 S23: 0.1424 REMARK 3 S31: 0.5734 S32: -0.2466 S33: -0.1390 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 346 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5746 -6.2104 -5.5449 REMARK 3 T TENSOR REMARK 3 T11: 0.2083 T22: 0.2090 REMARK 3 T33: 0.2225 T12: 0.0041 REMARK 3 T13: -0.0676 T23: 0.0510 REMARK 3 L TENSOR REMARK 3 L11: 2.3643 L22: 5.1270 REMARK 3 L33: 3.9915 L12: 2.6199 REMARK 3 L13: -2.0273 L23: -0.0947 REMARK 3 S TENSOR REMARK 3 S11: -0.0716 S12: 0.1695 S13: 0.2913 REMARK 3 S21: -0.0804 S22: -0.1078 S23: -0.1977 REMARK 3 S31: -0.2182 S32: 0.3620 S33: 0.1472 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 361 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1299 -15.6169 -5.7558 REMARK 3 T TENSOR REMARK 3 T11: 0.1600 T22: 0.1573 REMARK 3 T33: 0.1623 T12: -0.0127 REMARK 3 T13: -0.0069 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 3.6618 L22: 2.8162 REMARK 3 L33: 5.4810 L12: 0.8123 REMARK 3 L13: 1.9332 L23: 1.1163 REMARK 3 S TENSOR REMARK 3 S11: 0.2311 S12: -0.3496 S13: -0.2250 REMARK 3 S21: 0.1335 S22: -0.0997 S23: -0.0098 REMARK 3 S31: 0.1759 S32: -0.2715 S33: -0.1320 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 378 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.0796 -21.9674 -20.5509 REMARK 3 T TENSOR REMARK 3 T11: 0.2542 T22: 0.1229 REMARK 3 T33: 0.2138 T12: -0.0452 REMARK 3 T13: -0.0475 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.3682 L22: 3.6299 REMARK 3 L33: 7.2092 L12: -0.0288 REMARK 3 L13: 1.5628 L23: -3.1015 REMARK 3 S TENSOR REMARK 3 S11: 0.1693 S12: -0.0650 S13: -0.5474 REMARK 3 S21: -0.2564 S22: 0.0483 S23: 0.0857 REMARK 3 S31: 0.7701 S32: -0.1452 S33: -0.1835 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 386 THROUGH 395 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0542 -14.2828 -23.1308 REMARK 3 T TENSOR REMARK 3 T11: 0.2163 T22: 0.1888 REMARK 3 T33: 0.1473 T12: -0.0048 REMARK 3 T13: 0.0044 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 5.1363 L22: 1.7799 REMARK 3 L33: 4.4523 L12: 0.6153 REMARK 3 L13: 3.8580 L23: 1.4977 REMARK 3 S TENSOR REMARK 3 S11: 0.0510 S12: 0.4896 S13: -0.1772 REMARK 3 S21: -0.2177 S22: 0.1704 S23: -0.1151 REMARK 3 S31: -0.0065 S32: 0.5217 S33: -0.2122 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 396 THROUGH 404 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0554 -15.3444 -12.4915 REMARK 3 T TENSOR REMARK 3 T11: 0.2072 T22: 0.2563 REMARK 3 T33: 0.2658 T12: 0.0626 REMARK 3 T13: -0.0272 T23: -0.0812 REMARK 3 L TENSOR REMARK 3 L11: 9.3782 L22: 7.2731 REMARK 3 L33: 5.7053 L12: 0.9458 REMARK 3 L13: -0.7736 L23: -0.3316 REMARK 3 S TENSOR REMARK 3 S11: 0.1278 S12: 0.2955 S13: -0.8724 REMARK 3 S21: -0.0425 S22: 0.1315 S23: -0.8091 REMARK 3 S31: 0.3799 S32: 0.9459 S33: -0.2177 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 405 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7327 -9.6010 -16.2237 REMARK 3 T TENSOR REMARK 3 T11: 0.2804 T22: 0.6663 REMARK 3 T33: 0.4049 T12: -0.0070 REMARK 3 T13: 0.1133 T23: -0.0503 REMARK 3 L TENSOR REMARK 3 L11: 5.7025 L22: 6.2627 REMARK 3 L33: 3.5817 L12: -3.7068 REMARK 3 L13: -1.1580 L23: 2.5846 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.6475 S13: -0.4198 REMARK 3 S21: -0.5180 S22: 0.1463 S23: -0.9140 REMARK 3 S31: -0.2076 S32: 1.1579 S33: 0.0317 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 411 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2664 -6.6175 -16.2688 REMARK 3 T TENSOR REMARK 3 T11: 0.1962 T22: 0.1153 REMARK 3 T33: 0.1297 T12: -0.0211 REMARK 3 T13: -0.0289 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 5.2849 L22: 2.8399 REMARK 3 L33: 3.3945 L12: 1.3122 REMARK 3 L13: 2.5299 L23: 0.4379 REMARK 3 S TENSOR REMARK 3 S11: -0.4179 S12: 0.1209 S13: 0.3293 REMARK 3 S21: -0.1867 S22: 0.0652 S23: -0.0163 REMARK 3 S31: -0.3290 S32: 0.2705 S33: 0.3555 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 429 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7854 -8.6659 -14.5381 REMARK 3 T TENSOR REMARK 3 T11: 0.2288 T22: 0.3255 REMARK 3 T33: 0.2354 T12: 0.0687 REMARK 3 T13: -0.0242 T23: -0.0543 REMARK 3 L TENSOR REMARK 3 L11: 2.5757 L22: 4.9864 REMARK 3 L33: 6.3818 L12: 3.5824 REMARK 3 L13: -1.3304 L23: -1.9025 REMARK 3 S TENSOR REMARK 3 S11: 0.2006 S12: -0.4869 S13: 0.5551 REMARK 3 S21: 0.0161 S22: -0.1159 S23: 0.7812 REMARK 3 S31: -0.3971 S32: -1.2917 S33: -0.0966 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 434 THROUGH 454 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6608 -3.0516 -6.3702 REMARK 3 T TENSOR REMARK 3 T11: 0.1936 T22: 0.1332 REMARK 3 T33: 0.1482 T12: 0.0443 REMARK 3 T13: -0.0326 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 7.0819 L22: 4.5518 REMARK 3 L33: 2.6185 L12: 3.4186 REMARK 3 L13: 1.7737 L23: 0.5758 REMARK 3 S TENSOR REMARK 3 S11: -0.1117 S12: -0.3035 S13: 0.4843 REMARK 3 S21: 0.1814 S22: -0.1089 S23: 0.0432 REMARK 3 S31: -0.2610 S32: -0.1784 S33: 0.2376 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6664 -17.6454 -6.7856 REMARK 3 T TENSOR REMARK 3 T11: 0.2608 T22: 0.4225 REMARK 3 T33: 0.2112 T12: -0.1210 REMARK 3 T13: 0.0405 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.6835 L22: 2.4285 REMARK 3 L33: 2.0938 L12: -0.8681 REMARK 3 L13: -0.5517 L23: 0.9470 REMARK 3 S TENSOR REMARK 3 S11: 0.0999 S12: -0.6476 S13: -0.2773 REMARK 3 S21: 0.5251 S22: -0.2129 S23: 0.3816 REMARK 3 S31: 0.5519 S32: -0.8970 S33: 0.0509 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5541 18.2544 -0.3875 REMARK 3 T TENSOR REMARK 3 T11: 0.1944 T22: 0.2619 REMARK 3 T33: 0.1537 T12: 0.0154 REMARK 3 T13: 0.0446 T23: -0.0322 REMARK 3 L TENSOR REMARK 3 L11: 4.2883 L22: 2.3639 REMARK 3 L33: 1.7224 L12: 0.4926 REMARK 3 L13: 0.5377 L23: -0.0694 REMARK 3 S TENSOR REMARK 3 S11: 0.0817 S12: -0.4118 S13: 0.2870 REMARK 3 S21: 0.4130 S22: -0.0559 S23: 0.2849 REMARK 3 S31: -0.1951 S32: -0.5673 S33: -0.0453 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000264346. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953735 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39575 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.42700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ONI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM FLUORIDE, 0.1 M BIS-TRIS REMARK 280 PROPANE, PH 8.5, 20% W/V PEG3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.21000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 342 REMARK 465 PRO A 343 REMARK 465 LEU A 344 REMARK 465 GLY A 345 REMARK 465 SER A 346 REMARK 465 GLY B 342 REMARK 465 PRO B 343 REMARK 465 LEU B 344 REMARK 465 GLY B 345 REMARK 465 ASP B 455 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 363 CD CE NZ REMARK 480 LYS A 364 NZ REMARK 480 LYS A 374 CE NZ REMARK 480 LYS A 391 CE NZ REMARK 480 ARG A 406 CD NE CZ NH1 NH2 REMARK 480 ARG A 409 CG CD NE CZ NH1 NH2 REMARK 480 ARG A 440 CZ NH1 NH2 REMARK 480 LYS A 441 CD CE NZ REMARK 480 PHE A 448 CD1 REMARK 480 LYS B 363 NZ REMARK 480 LYS B 364 NZ REMARK 480 LYS B 374 CE NZ REMARK 480 LYS B 391 CG CD CE NZ REMARK 480 ARG B 406 CD NE CZ NH1 NH2 REMARK 480 ARG B 409 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALY C 9 -42.64 74.20 REMARK 500 ALY D 9 -41.74 70.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 409 ASP B 410 -149.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 620 DISTANCE = 5.93 ANGSTROMS DBREF 8CV7 A 347 455 UNP P25440 BRD2_HUMAN 300 408 DBREF 8CV7 B 347 455 UNP P25440 BRD2_HUMAN 300 408 DBREF 8CV7 C 1 12 PDB 8CV7 8CV7 1 12 DBREF 8CV7 D 1 12 PDB 8CV7 8CV7 1 12 SEQADV 8CV7 GLY A 342 UNP P25440 EXPRESSION TAG SEQADV 8CV7 PRO A 343 UNP P25440 EXPRESSION TAG SEQADV 8CV7 LEU A 344 UNP P25440 EXPRESSION TAG SEQADV 8CV7 GLY A 345 UNP P25440 EXPRESSION TAG SEQADV 8CV7 SER A 346 UNP P25440 EXPRESSION TAG SEQADV 8CV7 GLY B 342 UNP P25440 EXPRESSION TAG SEQADV 8CV7 PRO B 343 UNP P25440 EXPRESSION TAG SEQADV 8CV7 LEU B 344 UNP P25440 EXPRESSION TAG SEQADV 8CV7 GLY B 345 UNP P25440 EXPRESSION TAG SEQADV 8CV7 SER B 346 UNP P25440 EXPRESSION TAG SEQRES 1 A 114 GLY PRO LEU GLY SER SER GLU GLN LEU LYS HIS CYS ASN SEQRES 2 A 114 GLY ILE LEU LYS GLU LEU LEU SER LYS LYS HIS ALA ALA SEQRES 3 A 114 TYR ALA TRP PRO PHE TYR LYS PRO VAL ASP ALA SER ALA SEQRES 4 A 114 LEU GLY LEU HIS ASP TYR HIS ASP ILE ILE LYS HIS PRO SEQRES 5 A 114 MET ASP LEU SER THR VAL LYS ARG LYS MET GLU ASN ARG SEQRES 6 A 114 ASP TYR ARG ASP ALA GLN GLU PHE ALA ALA ASP VAL ARG SEQRES 7 A 114 LEU MET PHE SER ASN CYS TYR LYS TYR ASN PRO PRO ASP SEQRES 8 A 114 HIS ASP VAL VAL ALA MET ALA ARG LYS LEU GLN ASP VAL SEQRES 9 A 114 PHE GLU PHE ARG TYR ALA LYS MET PRO ASP SEQRES 1 B 114 GLY PRO LEU GLY SER SER GLU GLN LEU LYS HIS CYS ASN SEQRES 2 B 114 GLY ILE LEU LYS GLU LEU LEU SER LYS LYS HIS ALA ALA SEQRES 3 B 114 TYR ALA TRP PRO PHE TYR LYS PRO VAL ASP ALA SER ALA SEQRES 4 B 114 LEU GLY LEU HIS ASP TYR HIS ASP ILE ILE LYS HIS PRO SEQRES 5 B 114 MET ASP LEU SER THR VAL LYS ARG LYS MET GLU ASN ARG SEQRES 6 B 114 ASP TYR ARG ASP ALA GLN GLU PHE ALA ALA ASP VAL ARG SEQRES 7 B 114 LEU MET PHE SER ASN CYS TYR LYS TYR ASN PRO PRO ASP SEQRES 8 B 114 HIS ASP VAL VAL ALA MET ALA ARG LYS LEU GLN ASP VAL SEQRES 9 B 114 PHE GLU PHE ARG TYR ALA LYS MET PRO ASP SEQRES 1 C 12 TRP TYR GLY TYR TRP ALY VAL PRO ALY ARG LYS CYS SEQRES 1 D 12 TRP TYR GLY TYR TRP ALY VAL PRO ALY ARG LYS CYS HET ALY C 6 12 HET ALY C 9 12 HET ALY D 6 12 HET ALY D 9 12 HET ACE C 101 3 HET NH2 C 102 1 HET ACE D 101 3 HET NH2 D 102 1 HETNAM ALY N(6)-ACETYLLYSINE HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP FORMUL 3 ALY 4(C8 H16 N2 O3) FORMUL 5 ACE 2(C2 H4 O) FORMUL 6 NH2 2(H2 N) FORMUL 9 HOH *270(H2 O) HELIX 1 AA1 SER A 347 LEU A 361 1 15 HELIX 2 AA2 SER A 362 LYS A 364 5 3 HELIX 3 AA3 HIS A 365 TRP A 370 1 6 HELIX 4 AA4 PRO A 371 TYR A 373 5 3 HELIX 5 AA5 ASP A 377 GLY A 382 1 6 HELIX 6 AA6 ASP A 385 ILE A 390 1 6 HELIX 7 AA7 ASP A 395 ASN A 405 1 11 HELIX 8 AA8 ASP A 410 ASN A 429 1 20 HELIX 9 AA9 HIS A 433 ALA A 451 1 19 HELIX 10 AB1 SER B 347 SER B 362 1 16 HELIX 11 AB2 HIS B 365 TRP B 370 1 6 HELIX 12 AB3 PRO B 371 TYR B 373 5 3 HELIX 13 AB4 ASP B 377 GLY B 382 1 6 HELIX 14 AB5 ASP B 385 ILE B 390 1 6 HELIX 15 AB6 ASP B 395 ASN B 405 1 11 HELIX 16 AB7 ASP B 410 ASN B 429 1 20 HELIX 17 AB8 HIS B 433 ALA B 451 1 19 LINK N TRP C 1 C ACE C 101 1555 1555 1.33 LINK C TRP C 5 N ALY C 6 1555 1555 1.33 LINK C ALY C 6 N VAL C 7 1555 1555 1.33 LINK C PRO C 8 N ALY C 9 1555 1555 1.33 LINK C ALY C 9 N ARG C 10 1555 1555 1.33 LINK SG CYS C 12 CH3 ACE C 101 1555 1555 1.77 LINK C CYS C 12 N NH2 C 102 1555 1555 1.43 LINK N TRP D 1 C ACE D 101 1555 1555 1.33 LINK C TRP D 5 N ALY D 6 1555 1555 1.33 LINK C ALY D 6 N VAL D 7 1555 1555 1.33 LINK C PRO D 8 N ALY D 9 1555 1555 1.33 LINK C ALY D 9 N ARG D 10 1555 1555 1.34 LINK SG CYS D 12 CH3 ACE D 101 1555 1555 1.77 LINK C CYS D 12 N NH2 D 102 1555 1555 1.43 CRYST1 52.948 52.420 55.993 90.00 96.67 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018886 0.000000 0.002210 0.00000 SCALE2 0.000000 0.019077 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017981 0.00000