HEADER HYDROLASE 19-MAY-22 8CWP TITLE X-RAY CRYSTAL STRUCTURE OF NTHI PROTEIN D BOUND TO A PUTATIVE GLYCEROL TITLE 2 MOIETY COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 727; SOURCE 4 GENE: GLPQ, CHBNIII1_03270; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS NTHI, OTITIS MEDIA, OUTER MEMBRANE PROTEIN, PHOSPHODIESTERASE, LIPO- KEYWDS 2 GLYCEROPHOSPHODIESTERASE, SN-GLYCERO-3-PHOSPHOCHOLINE, CHOLINE, SN- KEYWDS 3 GLYCEROL 3-PHOSPHATE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.P.JONES,K.H.COOK,M.L.HOLMQUIST,L.ALMEKINDER,A.DELANEY,N.LABBE, AUTHOR 2 J.PERDUE,N.JACKSON,R.CHARLES,M.PICHICHERO,R.KAUR,L.MICHEL, AUTHOR 3 M.L.GLEGHORN REVDAT 3 25-OCT-23 8CWP 1 REMARK REVDAT 2 11-JAN-23 8CWP 1 JRNL REVDAT 1 28-SEP-22 8CWP 0 JRNL AUTH S.P.JONES,K.H.COOK,M.L.HOLMQUIST,L.J.ALMEKINDER,A.M.DELANEY, JRNL AUTH 2 R.CHARLES,N.LABBE,J.PERDUE,N.JACKSON,M.E.PICHICHERO,R.KAUR, JRNL AUTH 3 L.V.MICHEL,M.L.GLEGHORN JRNL TITL VACCINE TARGET AND CARRIER MOLECULE NONTYPEABLE HAEMOPHILUS JRNL TITL 2 INFLUENZAE PROTEIN D DIMERIZES LIKE THE CLOSE ESCHERICHIA JRNL TITL 3 COLI GLPQ HOMOLOG BUT UNLIKE OTHER KNOWN HOMOLOG DIMERS. JRNL REF PROTEINS V. 91 161 2023 JRNL REFN ESSN 1097-0134 JRNL PMID 36065600 JRNL DOI 10.1002/PROT.26418 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0000 - 4.3300 1.00 3092 155 0.1591 0.2021 REMARK 3 2 4.3300 - 3.4400 1.00 2926 147 0.1249 0.1333 REMARK 3 3 3.4400 - 3.0100 1.00 2889 146 0.1416 0.1645 REMARK 3 4 3.0000 - 2.7300 1.00 2861 144 0.1533 0.1928 REMARK 3 5 2.7300 - 2.5300 1.00 2837 143 0.1489 0.1734 REMARK 3 6 2.5300 - 2.3900 1.00 2844 143 0.1424 0.2186 REMARK 3 7 2.3900 - 2.2700 1.00 2810 142 0.1507 0.1936 REMARK 3 8 2.2700 - 2.1700 1.00 2817 141 0.1587 0.2126 REMARK 3 9 2.1700 - 2.0800 1.00 2804 141 0.1674 0.2098 REMARK 3 10 2.0800 - 2.0100 1.00 2813 142 0.1751 0.2233 REMARK 3 11 2.0100 - 1.9500 1.00 2793 139 0.2047 0.2146 REMARK 3 12 1.9500 - 1.8900 1.00 2800 141 0.2428 0.3059 REMARK 3 13 1.8900 - 1.8400 1.00 2786 140 0.2986 0.3522 REMARK 3 14 1.8400 - 1.8000 0.95 2678 136 0.3386 0.3969 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.234 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.878 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2781 REMARK 3 ANGLE : 1.059 3758 REMARK 3 CHIRALITY : 0.061 393 REMARK 3 PLANARITY : 0.009 478 REMARK 3 DIHEDRAL : 13.478 1032 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -0.8553 -10.7266 -22.8939 REMARK 3 T TENSOR REMARK 3 T11: 0.2455 T22: 0.2725 REMARK 3 T33: 0.2417 T12: 0.0490 REMARK 3 T13: 0.0102 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.5185 L22: 1.3456 REMARK 3 L33: 2.3955 L12: 0.3515 REMARK 3 L13: -0.8998 L23: -0.5588 REMARK 3 S TENSOR REMARK 3 S11: -0.0303 S12: -0.3336 S13: -0.1296 REMARK 3 S21: 0.0850 S22: -0.0695 S23: -0.0326 REMARK 3 S31: 0.2920 S32: 0.3566 S33: 0.0408 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000263793. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979270 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41845 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 28.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.50 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.60 REMARK 200 R MERGE FOR SHELL (I) : 2.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.19.2_4158 REMARK 200 STARTING MODEL: 1YDY REMARK 200 REMARK 200 REMARK: THE CRYSTALS WERE APPROXIMATELY 3 MILLIMETERS X 120 REMARK 200 MICROMETERS (VISUALLY APPEARED THINNER IN THE THIRD DIMENSION). REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG3000, 0.1 M SODIUM CITRATE REMARK 280 PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.42950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.54500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.54500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 122.14425 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.54500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.54500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.71475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.54500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.54500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 122.14425 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.54500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.54500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.71475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.42950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -81.42950 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 622 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 HIS A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 ASN A 7 REMARK 465 MET A 8 REMARK 465 ALA A 9 REMARK 465 ASN A 10 REMARK 465 THR A 11 REMARK 465 GLN A 12 REMARK 465 MET A 13 REMARK 465 LYS A 14 REMARK 465 SER A 15 REMARK 465 ASP A 16 REMARK 465 GLY A 344 REMARK 465 ILE A 345 REMARK 465 LYS A 346 REMARK 465 LEU A 347 REMARK 465 GLU A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 211 O HOH A 503 1.49 REMARK 500 O HOH A 586 O HOH A 646 1.86 REMARK 500 O HOH A 719 O HOH A 789 1.90 REMARK 500 O HOH A 680 O HOH A 842 1.92 REMARK 500 O HOH A 525 O HOH A 680 1.94 REMARK 500 O HOH A 586 O HOH A 666 1.99 REMARK 500 O HOH A 827 O HOH A 865 2.07 REMARK 500 O HOH A 891 O HOH A 914 2.07 REMARK 500 O HOH A 769 O HOH A 802 2.07 REMARK 500 O HOH A 823 O HOH A 947 2.07 REMARK 500 O HOH A 607 O HOH A 729 2.08 REMARK 500 O HOH A 673 O HOH A 764 2.09 REMARK 500 O HOH A 651 O HOH A 858 2.10 REMARK 500 O HOH A 503 O HOH A 819 2.13 REMARK 500 OD2 ASP A 69 O HOH A 501 2.15 REMARK 500 O HOH A 686 O HOH A 792 2.16 REMARK 500 O HOH A 509 O HOH A 754 2.16 REMARK 500 O HOH A 739 O HOH A 938 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 32 -11.24 69.50 REMARK 500 LEU A 71 -8.18 -140.57 REMARK 500 ASP A 73 33.27 -91.61 REMARK 500 ARG A 81 39.43 -95.59 REMARK 500 SER A 127 -155.36 66.08 REMARK 500 TYR A 155 68.83 -151.26 REMARK 500 ASP A 185 10.58 -146.13 REMARK 500 ALA A 306 53.44 -142.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 49 OE2 REMARK 620 2 ASP A 51 OD1 96.8 REMARK 620 3 GLU A 157 OE1 124.7 85.1 REMARK 620 4 GOL A 402 O3 76.3 167.2 90.0 REMARK 620 5 GOL A 402 O3 80.8 163.8 83.2 6.8 REMARK 620 6 GOL A 402 O1 150.1 95.9 83.4 95.2 93.8 REMARK 620 7 HOH A 568 O 76.4 82.7 156.9 105.7 112.0 78.5 REMARK 620 N 1 2 3 4 5 6 DBREF1 8CWP A 2 346 UNP A0A8D4QYM6_HAEIF DBREF2 8CWP A A0A8D4QYM6 20 364 SEQADV 8CWP MET A 1 UNP A0A8D4QYM INITIATING METHIONINE SEQADV 8CWP LEU A 347 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP GLU A 348 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP HIS A 349 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP HIS A 350 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP HIS A 351 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP HIS A 352 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP HIS A 353 UNP A0A8D4QYM EXPRESSION TAG SEQADV 8CWP HIS A 354 UNP A0A8D4QYM EXPRESSION TAG SEQRES 1 A 354 MET SER SER HIS SER SER ASN MET ALA ASN THR GLN MET SEQRES 2 A 354 LYS SER ASP LYS ILE ILE ILE ALA HIS ARG GLY ALA SER SEQRES 3 A 354 GLY TYR LEU PRO GLU HIS THR LEU GLU SER LYS ALA LEU SEQRES 4 A 354 ALA PHE ALA GLN HIS ALA ASP TYR LEU GLU GLN ASP LEU SEQRES 5 A 354 ALA MET THR LYS ASP GLY ARG LEU VAL VAL ILE HIS ASP SEQRES 6 A 354 HIS PHE LEU ASP GLY LEU THR ASP VAL ALA LYS LYS PHE SEQRES 7 A 354 PRO HIS ARG HIS ARG LYS ASP GLY ARG TYR TYR VAL ILE SEQRES 8 A 354 ASP PHE THR LEU LYS GLU ILE GLN SER LEU GLU MET THR SEQRES 9 A 354 GLU ASN PHE GLU THR LYS ASP GLY LYS GLN ALA GLN VAL SEQRES 10 A 354 TYR PRO ASN ARG PHE PRO LEU TRP LYS SER HIS PHE ARG SEQRES 11 A 354 ILE HIS THR PHE GLU ASP GLU ILE GLU PHE ILE GLN GLY SEQRES 12 A 354 LEU GLU LYS SER THR GLY LYS LYS VAL GLY ILE TYR PRO SEQRES 13 A 354 GLU ILE LYS ALA PRO TRP PHE HIS HIS GLN ASN GLY LYS SEQRES 14 A 354 ASP ILE ALA ALA GLU THR LEU LYS VAL LEU LYS LYS TYR SEQRES 15 A 354 GLY TYR ASP LYS LYS THR ASP MET VAL TYR LEU GLN THR SEQRES 16 A 354 PHE ASP PHE ASN GLU LEU LYS ARG ILE LYS THR GLU LEU SEQRES 17 A 354 LEU PRO GLN MET GLY MET ASP LEU LYS LEU VAL GLN LEU SEQRES 18 A 354 ILE ALA TYR THR ASP TRP LYS GLU THR GLN GLU LYS ASP SEQRES 19 A 354 PRO LYS GLY TYR TRP VAL ASN TYR ASN TYR ASP TRP MET SEQRES 20 A 354 PHE LYS PRO GLY ALA MET ALA GLU VAL VAL LYS TYR ALA SEQRES 21 A 354 ASP GLY VAL GLY PRO GLY TRP TYR MET LEU VAL ASN LYS SEQRES 22 A 354 GLU GLU SER LYS PRO ASP ASN ILE VAL TYR THR PRO LEU SEQRES 23 A 354 VAL LYS GLU LEU ALA GLN TYR ASN VAL GLU LEU HIS PRO SEQRES 24 A 354 TYR THR VAL ARG LYS ASP ALA LEU PRO GLU PHE PHE THR SEQRES 25 A 354 ASP VAL ASN GLN MET TYR ASP THR LEU LEU ASN LYS SER SEQRES 26 A 354 GLY ALA THR GLY VAL PHE THR ASP PHE PRO ASP THR GLY SEQRES 27 A 354 VAL GLU PHE LEU LYS GLY ILE LYS LEU GLU HIS HIS HIS SEQRES 28 A 354 HIS HIS HIS HET NA A 401 1 HET GOL A 402 27 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NA NA 1+ FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *457(H2 O) HELIX 1 AA1 THR A 33 GLN A 43 1 11 HELIX 2 AA2 ASP A 73 PHE A 78 1 6 HELIX 3 AA3 TYR A 89 PHE A 93 5 5 HELIX 4 AA4 THR A 94 SER A 100 1 7 HELIX 5 AA5 THR A 133 GLY A 149 1 17 HELIX 6 AA6 ALA A 160 ASN A 167 1 8 HELIX 7 AA7 ASP A 170 TYR A 182 1 13 HELIX 8 AA8 ASP A 197 GLU A 207 1 11 HELIX 9 AA9 GLU A 207 GLY A 213 1 7 HELIX 10 AB1 TYR A 224 LYS A 228 5 5 HELIX 11 AB2 TYR A 244 LYS A 249 5 6 HELIX 12 AB3 ALA A 252 LYS A 258 1 7 HELIX 13 AB4 GLY A 266 LEU A 270 5 5 HELIX 14 AB5 PRO A 285 ALA A 291 1 7 HELIX 15 AB6 ASP A 313 SER A 325 1 13 HELIX 16 AB7 PHE A 334 LYS A 343 1 10 SHEET 1 AA1 3 LEU A 60 VAL A 62 0 SHEET 2 AA1 3 TYR A 47 MET A 54 -1 N ALA A 53 O VAL A 61 SHEET 3 AA1 3 GLY A 153 ILE A 158 1 O GLU A 157 N GLN A 50 SHEET 1 AA2 4 LEU A 60 VAL A 62 0 SHEET 2 AA2 4 TYR A 47 MET A 54 -1 N ALA A 53 O VAL A 61 SHEET 3 AA2 4 ILE A 18 ALA A 21 1 N ALA A 21 O TYR A 47 SHEET 4 AA2 4 GLY A 329 THR A 332 1 O VAL A 330 N ILE A 20 SHEET 1 AA3 2 PHE A 107 LYS A 110 0 SHEET 2 AA3 2 LYS A 113 GLN A 116 -1 O ALA A 115 N GLU A 108 SHEET 1 AA4 4 TYR A 192 THR A 195 0 SHEET 2 AA4 4 LYS A 217 LEU A 221 1 O LYS A 217 N LEU A 193 SHEET 3 AA4 4 GLY A 262 GLY A 264 1 O GLY A 264 N GLN A 220 SHEET 4 AA4 4 GLU A 296 LEU A 297 1 O GLU A 296 N VAL A 263 SHEET 1 AA5 2 GLN A 231 LYS A 233 0 SHEET 2 AA5 2 TRP A 239 ASN A 241 -1 O VAL A 240 N GLU A 232 LINK OE2 GLU A 49 NA NA A 401 1555 1555 2.28 LINK OD1 ASP A 51 NA NA A 401 1555 1555 2.35 LINK OE1 GLU A 157 NA NA A 401 1555 1555 2.29 LINK NA NA A 401 O3 AGOL A 402 1555 1555 2.90 LINK NA NA A 401 O3 BGOL A 402 1555 1555 2.70 LINK NA NA A 401 O1 AGOL A 402 1555 1555 2.13 LINK NA NA A 401 O HOH A 568 1555 1555 2.48 CISPEP 1 TYR A 300 THR A 301 0 -12.98 CRYST1 73.090 73.090 162.859 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013682 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013682 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006140 0.00000