HEADER VIRAL PROTEIN 23-MAY-22 8CYL TITLE AST89 P DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP60; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CAPSID PROTEIN VP60; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAGOVIRUS; SOURCE 3 ORGANISM_TAXID: 95339; SOURCE 4 STRAIN: AST89; SOURCE 5 GENE: ORF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAGOVIRUS; SOURCE 10 ORGANISM_TAXID: 95339; SOURCE 11 STRAIN: AST89; SOURCE 12 GENE: ORF1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RHDV, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.LEUTHOLD,T.KILIC,G.HANSMAN REVDAT 3 25-OCT-23 8CYL 1 REMARK REVDAT 2 03-MAY-23 8CYL 1 JRNL REVDAT 1 19-OCT-22 8CYL 0 JRNL AUTH M.M.LEUTHOLD,T.KILIC,J.M.DEVANT,O.LANDETA,F.PARRA, JRNL AUTH 2 K.P.DALTON,G.S.HANSMAN JRNL TITL STRUCTURAL BASIS FOR RABBIT HEMORRHAGIC DISEASE VIRUS JRNL TITL 2 ANTIBODY SPECIFICITY. JRNL REF J.VIROL. V. 96 21722 2022 JRNL REFN ESSN 1098-5514 JRNL PMID 36326275 JRNL DOI 10.1128/JVI.01217-22 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 47320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4150 - 4.8533 0.98 2826 148 0.1414 0.1481 REMARK 3 2 4.8533 - 3.8530 0.99 2736 144 0.1253 0.1486 REMARK 3 3 3.8530 - 3.3662 0.96 2618 138 0.1511 0.1875 REMARK 3 4 3.3662 - 3.0585 0.99 2681 141 0.1713 0.1953 REMARK 3 5 3.0585 - 2.8394 0.99 2680 141 0.1774 0.1945 REMARK 3 6 2.8394 - 2.6720 1.00 2684 142 0.1759 0.2074 REMARK 3 7 2.6720 - 2.5382 0.97 2607 137 0.1719 0.2083 REMARK 3 8 2.5382 - 2.4277 0.99 2646 139 0.1740 0.2049 REMARK 3 9 2.4277 - 2.3343 0.99 2620 138 0.1694 0.2098 REMARK 3 10 2.3343 - 2.2537 0.99 2643 139 0.1731 0.2130 REMARK 3 11 2.2537 - 2.1832 0.99 2640 139 0.1712 0.2379 REMARK 3 12 2.1832 - 2.1208 0.99 2629 138 0.1695 0.2299 REMARK 3 13 2.1208 - 2.0650 0.99 2650 140 0.1711 0.2144 REMARK 3 14 2.0650 - 2.0146 0.96 2568 135 0.1767 0.2333 REMARK 3 15 2.0146 - 1.9688 0.98 2580 136 0.1874 0.2362 REMARK 3 16 1.9688 - 1.9269 0.99 2631 138 0.2046 0.2589 REMARK 3 17 1.9269 - 1.8884 0.95 2515 133 0.2125 0.2320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5034 REMARK 3 ANGLE : 0.770 6939 REMARK 3 CHIRALITY : 0.051 786 REMARK 3 PLANARITY : 0.005 925 REMARK 3 DIHEDRAL : 2.582 3856 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6975 -1.8125 26.5285 REMARK 3 T TENSOR REMARK 3 T11: 0.2124 T22: 0.2338 REMARK 3 T33: 0.2879 T12: 0.0005 REMARK 3 T13: 0.0332 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.0477 L22: 1.6456 REMARK 3 L33: 1.9688 L12: -0.1694 REMARK 3 L13: -0.1744 L23: 1.7368 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.1011 S13: 0.3692 REMARK 3 S21: -0.0158 S22: 0.1269 S23: 0.2197 REMARK 3 S31: -0.2641 S32: 0.0646 S33: -0.1025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3282 -5.1947 12.8931 REMARK 3 T TENSOR REMARK 3 T11: 0.1470 T22: 0.1504 REMARK 3 T33: 0.1411 T12: 0.0302 REMARK 3 T13: -0.0100 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.7374 L22: 1.8919 REMARK 3 L33: 1.3360 L12: 0.9739 REMARK 3 L13: -0.8226 L23: -0.6122 REMARK 3 S TENSOR REMARK 3 S11: -0.0324 S12: -0.0395 S13: 0.0686 REMARK 3 S21: -0.0028 S22: 0.0495 S23: -0.0502 REMARK 3 S31: -0.0297 S32: -0.0337 S33: -0.0222 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7942 0.3130 -3.4458 REMARK 3 T TENSOR REMARK 3 T11: 0.1092 T22: 0.0911 REMARK 3 T33: 0.2021 T12: 0.0023 REMARK 3 T13: -0.0005 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 1.0382 L22: 1.4363 REMARK 3 L33: 1.8119 L12: 1.1009 REMARK 3 L13: 0.8181 L23: 0.5728 REMARK 3 S TENSOR REMARK 3 S11: 0.0385 S12: 0.0391 S13: 0.1312 REMARK 3 S21: -0.0339 S22: 0.1131 S23: -0.2116 REMARK 3 S31: -0.1595 S32: 0.1290 S33: -0.1739 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 335 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0365 -7.2985 -3.2470 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.1417 REMARK 3 T33: 0.1976 T12: -0.0068 REMARK 3 T13: 0.0156 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.5146 L22: 1.2399 REMARK 3 L33: 1.9730 L12: -0.3958 REMARK 3 L13: 0.4332 L23: -0.7862 REMARK 3 S TENSOR REMARK 3 S11: -0.0179 S12: 0.0695 S13: 0.0406 REMARK 3 S21: -0.0321 S22: -0.0215 S23: -0.1510 REMARK 3 S31: 0.0349 S32: 0.1069 S33: 0.0488 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 392 THROUGH 416 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4878 -4.8804 -4.0622 REMARK 3 T TENSOR REMARK 3 T11: 0.1296 T22: 0.1545 REMARK 3 T33: 0.2044 T12: 0.0057 REMARK 3 T13: 0.0090 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.5547 L22: 1.0738 REMARK 3 L33: 0.9154 L12: 0.2311 REMARK 3 L13: -0.1076 L23: 0.0062 REMARK 3 S TENSOR REMARK 3 S11: -0.0208 S12: 0.0459 S13: 0.0599 REMARK 3 S21: -0.0714 S22: 0.0543 S23: -0.2244 REMARK 3 S31: -0.0842 S32: 0.1480 S33: -0.0451 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 417 THROUGH 476 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5181 -14.3568 9.2142 REMARK 3 T TENSOR REMARK 3 T11: 0.1431 T22: 0.1503 REMARK 3 T33: 0.1544 T12: 0.0175 REMARK 3 T13: -0.0053 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 1.0468 L22: 0.6954 REMARK 3 L33: 0.8461 L12: 0.0306 REMARK 3 L13: -0.3600 L23: -0.2728 REMARK 3 S TENSOR REMARK 3 S11: -0.0080 S12: -0.1357 S13: -0.0556 REMARK 3 S21: 0.0661 S22: 0.0145 S23: -0.0521 REMARK 3 S31: -0.0237 S32: 0.0451 S33: -0.0006 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 477 THROUGH 510 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2425 -6.8474 17.3547 REMARK 3 T TENSOR REMARK 3 T11: 0.1475 T22: 0.1982 REMARK 3 T33: 0.1245 T12: -0.0040 REMARK 3 T13: -0.0118 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.7391 L22: 1.7046 REMARK 3 L33: 1.5897 L12: -0.1284 REMARK 3 L13: -0.2268 L23: 0.8110 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: -0.2588 S13: 0.1410 REMARK 3 S21: 0.1017 S22: 0.0555 S23: -0.1184 REMARK 3 S31: -0.0851 S32: -0.0234 S33: -0.0515 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 511 THROUGH 551 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6361 -14.9397 24.9149 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.2188 REMARK 3 T33: 0.1722 T12: 0.0051 REMARK 3 T13: -0.0169 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 2.1396 L22: 1.2543 REMARK 3 L33: 0.4690 L12: 0.6098 REMARK 3 L13: -0.4315 L23: -0.1294 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: -0.2196 S13: -0.0521 REMARK 3 S21: 0.0135 S22: -0.0892 S23: 0.1000 REMARK 3 S31: 0.0864 S32: -0.0328 S33: 0.1315 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 552 THROUGH 569 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6436 -13.6484 31.5123 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: 0.2806 REMARK 3 T33: 0.1539 T12: 0.0133 REMARK 3 T13: 0.0221 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 3.2495 L22: 3.5794 REMARK 3 L33: 2.0789 L12: -0.9334 REMARK 3 L13: 0.4893 L23: -0.2694 REMARK 3 S TENSOR REMARK 3 S11: -0.0358 S12: -0.3567 S13: -0.0297 REMARK 3 S21: 0.2080 S22: -0.0704 S23: 0.1839 REMARK 3 S31: 0.3763 S32: -0.0497 S33: 0.0631 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 237 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1001 0.4175 0.4402 REMARK 3 T TENSOR REMARK 3 T11: 0.1255 T22: 0.1330 REMARK 3 T33: 0.1228 T12: 0.0089 REMARK 3 T13: -0.0062 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.4031 L22: 2.0798 REMARK 3 L33: 1.3196 L12: 0.0865 REMARK 3 L13: -0.0792 L23: 0.6340 REMARK 3 S TENSOR REMARK 3 S11: -0.0209 S12: -0.0492 S13: 0.0497 REMARK 3 S21: 0.0374 S22: 0.0599 S23: -0.0139 REMARK 3 S31: 0.0275 S32: 0.0246 S33: -0.0177 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 298 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9455 -16.3454 -16.7963 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.1219 REMARK 3 T33: 0.1194 T12: 0.0041 REMARK 3 T13: -0.0151 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 4.3857 L22: 1.2025 REMARK 3 L33: 2.1426 L12: 0.9408 REMARK 3 L13: -2.1551 L23: -0.6438 REMARK 3 S TENSOR REMARK 3 S11: -0.1141 S12: 0.1935 S13: -0.1620 REMARK 3 S21: -0.1479 S22: 0.0583 S23: -0.0250 REMARK 3 S31: 0.1671 S32: -0.0352 S33: 0.0657 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 335 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6226 -9.1096 -15.6159 REMARK 3 T TENSOR REMARK 3 T11: 0.1651 T22: 0.1499 REMARK 3 T33: 0.1052 T12: -0.0134 REMARK 3 T13: 0.0007 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 2.0793 L22: 2.2064 REMARK 3 L33: 0.6361 L12: -0.9999 REMARK 3 L13: 0.0524 L23: -0.0193 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.0915 S13: -0.0008 REMARK 3 S21: -0.1410 S22: -0.0144 S23: -0.0620 REMARK 3 S31: 0.0798 S32: 0.0154 S33: 0.0092 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 382 THROUGH 476 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0671 -1.0754 -13.6706 REMARK 3 T TENSOR REMARK 3 T11: 0.1547 T22: 0.1445 REMARK 3 T33: 0.1183 T12: -0.0069 REMARK 3 T13: -0.0120 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.6932 L22: 1.1250 REMARK 3 L33: 0.4922 L12: -0.2942 REMARK 3 L13: -0.2043 L23: 0.1584 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: 0.0713 S13: 0.0286 REMARK 3 S21: -0.1213 S22: 0.0245 S23: 0.0058 REMARK 3 S31: 0.0186 S32: -0.0067 S33: -0.0047 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 477 THROUGH 510 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6146 3.6571 2.3778 REMARK 3 T TENSOR REMARK 3 T11: 0.1309 T22: 0.1141 REMARK 3 T33: 0.1328 T12: -0.0031 REMARK 3 T13: -0.0211 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 2.9350 L22: 0.7865 REMARK 3 L33: 1.5781 L12: -0.1201 REMARK 3 L13: -1.1973 L23: 0.1312 REMARK 3 S TENSOR REMARK 3 S11: -0.0790 S12: -0.0968 S13: -0.0110 REMARK 3 S21: 0.0573 S22: 0.0415 S23: 0.0951 REMARK 3 S31: 0.0628 S32: -0.0768 S33: 0.0453 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 511 THROUGH 569 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2723 15.1752 5.2067 REMARK 3 T TENSOR REMARK 3 T11: 0.1664 T22: 0.1412 REMARK 3 T33: 0.2193 T12: 0.0245 REMARK 3 T13: -0.0103 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 1.0443 L22: 1.2370 REMARK 3 L33: 1.5433 L12: 0.1129 REMARK 3 L13: 0.0799 L23: -0.0508 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: -0.0924 S13: 0.1567 REMARK 3 S21: 0.0171 S22: -0.0420 S23: 0.0744 REMARK 3 S31: -0.1911 S32: -0.0339 S33: 0.0343 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CYL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 291.15 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47320 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.888 REMARK 200 RESOLUTION RANGE LOW (A) : 42.426 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 1.360 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 42.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4X1W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID (PH 4) AND 30% REMARK 280 PEG6000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.29500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.43000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.20500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.43000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.29500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.20500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 234 CG1 CG2 REMARK 470 SER A 236 OG REMARK 470 ILE A 237 CG1 CG2 CD1 REMARK 470 GLN A 260 CG CD OE1 NE2 REMARK 470 ASN A 307 CG OD1 ND2 REMARK 470 ASN A 345 CG OD1 ND2 REMARK 470 GLN A 389 CG CD OE1 NE2 REMARK 470 LYS A 457 CG CD CE NZ REMARK 470 ARG A 554 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 562 CG CD CE NZ REMARK 470 SER A 563 OG REMARK 470 ASN B 281 CG OD1 ND2 REMARK 470 ARG B 291 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 307 CG OD1 ND2 REMARK 470 LYS B 457 CG CD CE NZ REMARK 470 SER B 521 OG REMARK 470 ARG B 554 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 562 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 293 -93.70 -120.84 REMARK 500 THR A 476 -160.88 -129.75 REMARK 500 ALA B 293 -95.43 -121.57 REMARK 500 THR B 476 -157.97 -132.51 REMARK 500 ASN B 568 62.96 -118.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 8CYL A 231 569 UNP Q86119 POLG_RHDVA 1996 2334 DBREF 8CYL B 237 569 UNP Q86119 POLG_RHDVA 2002 2334 SEQRES 1 A 339 SER LYS THR VAL ASP SER ILE SER PRO ALA GLY LEU LEU SEQRES 2 A 339 THR THR PRO VAL LEU THR GLY VAL GLY ASN ASP ASN ARG SEQRES 3 A 339 TRP ASN GLY GLN ILE VAL GLY LEU GLN PRO VAL PRO GLY SEQRES 4 A 339 GLY PHE SER THR CYS ASN ARG HIS TRP ASN LEU ASN GLY SEQRES 5 A 339 SER THR TYR GLY TRP SER SER PRO ARG PHE ALA ASP ILE SEQRES 6 A 339 ASP HIS ARG ARG GLY SER ALA SER TYR PRO GLY ASN ASN SEQRES 7 A 339 ALA THR ASN VAL LEU GLN PHE TRP TYR ALA ASN ALA GLY SEQRES 8 A 339 SER ALA ILE ASP ASN PRO ILE SER GLN VAL ALA PRO ASP SEQRES 9 A 339 GLY PHE PRO ASP MET SER PHE VAL PRO PHE ASN GLY PRO SEQRES 10 A 339 GLY ILE PRO ALA ALA GLY TRP VAL GLY PHE GLY ALA ILE SEQRES 11 A 339 TRP ASN SER ASN SER GLY ALA PRO ASN VAL THR THR VAL SEQRES 12 A 339 GLN ALA TYR GLU LEU GLY PHE ALA THR GLY ALA PRO GLY SEQRES 13 A 339 ASN LEU GLN PRO THR THR ASN THR SER GLY SER GLN THR SEQRES 14 A 339 VAL ALA LYS SER ILE TYR ALA VAL VAL THR GLY THR ALA SEQRES 15 A 339 GLN ASN PRO ALA GLY LEU PHE VAL MET ALA SER GLY VAL SEQRES 16 A 339 ILE SER THR PRO SER ALA ASN ALA ILE THR TYR THR PRO SEQRES 17 A 339 GLN PRO ASP ARG ILE VAL THR THR PRO GLY THR PRO ALA SEQRES 18 A 339 ALA ALA PRO VAL GLY LYS ASN THR PRO ILE MET PHE ALA SEQRES 19 A 339 SER VAL VAL ARG ARG THR GLY ASP VAL ASN ALA THR ALA SEQRES 20 A 339 GLY SER ALA ASN GLY THR GLN TYR GLY THR GLY SER GLN SEQRES 21 A 339 PRO LEU PRO VAL THR ILE GLY LEU SER LEU ASN ASN TYR SEQRES 22 A 339 SER SER ALA LEU MET PRO GLY GLN PHE PHE VAL TRP GLN SEQRES 23 A 339 LEU THR PHE ALA SER GLY PHE MET GLU ILE GLY LEU SER SEQRES 24 A 339 VAL ASP GLY TYR PHE TYR ALA GLY THR GLY ALA SER THR SEQRES 25 A 339 THR LEU ILE ASP LEU THR GLU LEU ILE ASP VAL ARG PRO SEQRES 26 A 339 VAL GLY PRO ARG PRO SER LYS SER THR LEU VAL PHE ASN SEQRES 27 A 339 LEU SEQRES 1 B 333 ILE SER PRO ALA GLY LEU LEU THR THR PRO VAL LEU THR SEQRES 2 B 333 GLY VAL GLY ASN ASP ASN ARG TRP ASN GLY GLN ILE VAL SEQRES 3 B 333 GLY LEU GLN PRO VAL PRO GLY GLY PHE SER THR CYS ASN SEQRES 4 B 333 ARG HIS TRP ASN LEU ASN GLY SER THR TYR GLY TRP SER SEQRES 5 B 333 SER PRO ARG PHE ALA ASP ILE ASP HIS ARG ARG GLY SER SEQRES 6 B 333 ALA SER TYR PRO GLY ASN ASN ALA THR ASN VAL LEU GLN SEQRES 7 B 333 PHE TRP TYR ALA ASN ALA GLY SER ALA ILE ASP ASN PRO SEQRES 8 B 333 ILE SER GLN VAL ALA PRO ASP GLY PHE PRO ASP MET SER SEQRES 9 B 333 PHE VAL PRO PHE ASN GLY PRO GLY ILE PRO ALA ALA GLY SEQRES 10 B 333 TRP VAL GLY PHE GLY ALA ILE TRP ASN SER ASN SER GLY SEQRES 11 B 333 ALA PRO ASN VAL THR THR VAL GLN ALA TYR GLU LEU GLY SEQRES 12 B 333 PHE ALA THR GLY ALA PRO GLY ASN LEU GLN PRO THR THR SEQRES 13 B 333 ASN THR SER GLY SER GLN THR VAL ALA LYS SER ILE TYR SEQRES 14 B 333 ALA VAL VAL THR GLY THR ALA GLN ASN PRO ALA GLY LEU SEQRES 15 B 333 PHE VAL MET ALA SER GLY VAL ILE SER THR PRO SER ALA SEQRES 16 B 333 ASN ALA ILE THR TYR THR PRO GLN PRO ASP ARG ILE VAL SEQRES 17 B 333 THR THR PRO GLY THR PRO ALA ALA ALA PRO VAL GLY LYS SEQRES 18 B 333 ASN THR PRO ILE MET PHE ALA SER VAL VAL ARG ARG THR SEQRES 19 B 333 GLY ASP VAL ASN ALA THR ALA GLY SER ALA ASN GLY THR SEQRES 20 B 333 GLN TYR GLY THR GLY SER GLN PRO LEU PRO VAL THR ILE SEQRES 21 B 333 GLY LEU SER LEU ASN ASN TYR SER SER ALA LEU MET PRO SEQRES 22 B 333 GLY GLN PHE PHE VAL TRP GLN LEU THR PHE ALA SER GLY SEQRES 23 B 333 PHE MET GLU ILE GLY LEU SER VAL ASP GLY TYR PHE TYR SEQRES 24 B 333 ALA GLY THR GLY ALA SER THR THR LEU ILE ASP LEU THR SEQRES 25 B 333 GLU LEU ILE ASP VAL ARG PRO VAL GLY PRO ARG PRO SER SEQRES 26 B 333 LYS SER THR LEU VAL PHE ASN LEU FORMUL 3 HOH *445(H2 O) HELIX 1 AA1 SER A 238 LEU A 243 5 6 HELIX 2 AA2 THR A 244 THR A 249 1 6 HELIX 3 AA3 ASN A 369 VAL A 373 5 5 HELIX 4 AA4 GLN A 439 ILE A 443 5 5 HELIX 5 AA5 PRO A 491 ASN A 501 1 11 HELIX 6 AA6 SER B 238 LEU B 243 5 6 HELIX 7 AA7 THR B 244 THR B 249 1 6 HELIX 8 AA8 ASN B 369 VAL B 373 5 5 HELIX 9 AA9 GLN B 439 ILE B 443 5 5 HELIX 10 AB1 PRO B 491 ASN B 501 1 11 SHEET 1 AA1 6 TYR A 485 GLY A 488 0 SHEET 2 AA1 6 THR A 459 VAL A 466 -1 N PHE A 463 O GLY A 488 SHEET 3 AA1 6 PHE A 534 ALA A 536 -1 O ALA A 536 N THR A 459 SHEET 4 AA1 6 GLY A 522 LEU A 528 -1 N GLY A 527 O TYR A 535 SHEET 5 AA1 6 GLN A 511 PHE A 519 -1 N LEU A 517 O MET A 524 SHEET 6 AA1 6 LEU A 550 PRO A 560 -1 O ARG A 554 N GLN A 516 SHEET 1 AA2 6 ILE A 545 ASP A 546 0 SHEET 2 AA2 6 ILE A 261 PRO A 266 -1 N LEU A 264 O ILE A 545 SHEET 3 AA2 6 THR A 459 VAL A 466 -1 O MET A 462 N GLN A 265 SHEET 4 AA2 6 PHE A 534 ALA A 536 -1 O ALA A 536 N THR A 459 SHEET 5 AA2 6 GLY A 522 LEU A 528 -1 N GLY A 527 O TYR A 535 SHEET 6 AA2 6 PHE A 567 ASN A 568 -1 O ASN A 568 N PHE A 523 SHEET 1 AA3 2 PHE A 271 SER A 272 0 SHEET 2 AA3 2 ALA A 451 ALA A 452 -1 O ALA A 452 N PHE A 271 SHEET 1 AA4 4 GLN A 389 PRO A 390 0 SHEET 2 AA4 4 GLN A 374 THR A 382 -1 N THR A 382 O GLN A 389 SHEET 3 AA4 4 TRP A 354 TRP A 361 -1 N GLY A 356 O TYR A 376 SHEET 4 AA4 4 VAL A 425 ILE A 426 -1 O VAL A 425 N VAL A 355 SHEET 1 AA5 8 GLN A 389 PRO A 390 0 SHEET 2 AA5 8 GLN A 374 THR A 382 -1 N THR A 382 O GLN A 389 SHEET 3 AA5 8 GLN A 398 SER A 403 -1 O LYS A 402 N GLU A 377 SHEET 4 AA5 8 PHE A 315 ASN A 319 -1 N TRP A 316 O ALA A 401 SHEET 5 AA5 8 ASP A 294 SER A 303 -1 N SER A 303 O PHE A 315 SHEET 6 AA5 8 ALA A 416 MET A 421 -1 O VAL A 420 N ILE A 295 SHEET 7 AA5 8 TRP A 354 TRP A 361 -1 N TRP A 361 O GLY A 417 SHEET 8 AA5 8 VAL A 425 ILE A 426 -1 O VAL A 425 N VAL A 355 SHEET 1 AA6 6 TYR B 485 GLY B 488 0 SHEET 2 AA6 6 THR B 459 VAL B 466 -1 N PHE B 463 O GLY B 488 SHEET 3 AA6 6 PHE B 534 ALA B 536 -1 O ALA B 536 N THR B 459 SHEET 4 AA6 6 GLY B 522 LEU B 528 -1 N GLY B 527 O TYR B 535 SHEET 5 AA6 6 GLN B 511 PHE B 519 -1 N LEU B 517 O MET B 524 SHEET 6 AA6 6 LEU B 550 PRO B 560 -1 O ARG B 554 N GLN B 516 SHEET 1 AA7 6 ILE B 545 ASP B 546 0 SHEET 2 AA7 6 ILE B 261 PRO B 266 -1 N LEU B 264 O ILE B 545 SHEET 3 AA7 6 THR B 459 VAL B 466 -1 O MET B 462 N GLN B 265 SHEET 4 AA7 6 PHE B 534 ALA B 536 -1 O ALA B 536 N THR B 459 SHEET 5 AA7 6 GLY B 522 LEU B 528 -1 N GLY B 527 O TYR B 535 SHEET 6 AA7 6 PHE B 567 ASN B 568 -1 O ASN B 568 N PHE B 523 SHEET 1 AA8 4 GLN B 389 PRO B 390 0 SHEET 2 AA8 4 GLN B 374 THR B 382 -1 N THR B 382 O GLN B 389 SHEET 3 AA8 4 TRP B 354 TRP B 361 -1 N GLY B 356 O TYR B 376 SHEET 4 AA8 4 VAL B 425 ILE B 426 -1 O VAL B 425 N VAL B 355 SHEET 1 AA9 8 GLN B 389 PRO B 390 0 SHEET 2 AA9 8 GLN B 374 THR B 382 -1 N THR B 382 O GLN B 389 SHEET 3 AA9 8 GLN B 398 SER B 403 -1 O LYS B 402 N GLU B 377 SHEET 4 AA9 8 PHE B 315 ASN B 319 -1 N TRP B 316 O ALA B 401 SHEET 5 AA9 8 ASP B 294 SER B 303 -1 N SER B 301 O TYR B 317 SHEET 6 AA9 8 ALA B 416 MET B 421 -1 O VAL B 420 N ILE B 295 SHEET 7 AA9 8 TRP B 354 TRP B 361 -1 N TRP B 361 O GLY B 417 SHEET 8 AA9 8 VAL B 425 ILE B 426 -1 O VAL B 425 N VAL B 355 CISPEP 1 GLY A 346 PRO A 347 0 2.74 CISPEP 2 ALA A 384 PRO A 385 0 4.47 CISPEP 3 ASN A 414 PRO A 415 0 8.71 CISPEP 4 THR A 437 PRO A 438 0 1.00 CISPEP 5 GLY B 346 PRO B 347 0 2.88 CISPEP 6 ALA B 384 PRO B 385 0 0.33 CISPEP 7 ASN B 414 PRO B 415 0 9.00 CISPEP 8 THR B 437 PRO B 438 0 1.53 CRYST1 74.590 78.410 100.860 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013407 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012753 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009915 0.00000