data_8CZC # _entry.id 8CZC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.361 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8CZC pdb_00008czc 10.2210/pdb8czc/pdb WWPDB D_1000265738 ? ? EMDB EMD-27094 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'Pik(KSQ+AT1)' EMD-26839 'other EM volume' EMDB 'AT from first module of the pikromycin synthase' EMD-27094 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8CZC _pdbx_database_status.recvd_initial_deposition_date 2022-05-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Keatinge-Clay, A.T.' 1 0000-0002-4358-7628 'Dickinson, M.S.' 2 0000-0002-8016-1570 'Miyazawa, T.' 3 0000-0002-4425-9407 'McCool, R.S.' 4 0000-0001-8833-8847 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 0969-2126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 30 _citation.language ? _citation.page_first 1331 _citation.page_last ? _citation.title 'Priming enzymes from the pikromycin synthase reveal how assembly-line ketosynthases catalyze carbon-carbon chemistry.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2022.05.021 _citation.pdbx_database_id_PubMed 35738283 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dickinson, M.S.' 1 ? primary 'Miyazawa, T.' 2 ? primary 'McCool, R.S.' 3 ? primary 'Keatinge-Clay, A.T.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Narbonolide/10-deoxymethynolide synthase PikA1, modules 1 and 2' _entity.formula_weight 33011.234 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.3.1.239,2.3.1.240 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'First AT domain of pikromycin synthase' # _entity_name_com.entity_id 1 _entity_name_com.name ;Narbonolide/10-deoxymethynolide synthase PikAI,Pikromycin polyketide synthase component PikAI,Pikromycin PKS component PikAI,Type I modular polyketide synthase PikAI,PKS ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GVGRVAFVFPGQGTQWAGMGAELLDSSAVFAAAMAECEAALSPYVDWSLEAVVRQAPGAPTLERVDVVQPVTFAVMVSLA RVWQHHGVTPQAVVGHSQGEIAAAYVAGALSLDDAARVVTLRSKSIAAHLAGKGGMLSLALSEDAVLERLAGFDGLSVAA VNGPTATVVSGDPVQIEELARACEADGVRARVIPVDYASHSRQVEIIESELAEVLAGLSPQAPRVPFFSTLEGAWITEPV LDGGYWYRNLRHRVGFAPAVETLATDEGFTHFVEVSAHPVLTMALPGTVTGLATLRRDNGGQDRLVASLAEAWAN ; _entity_poly.pdbx_seq_one_letter_code_can ;GVGRVAFVFPGQGTQWAGMGAELLDSSAVFAAAMAECEAALSPYVDWSLEAVVRQAPGAPTLERVDVVQPVTFAVMVSLA RVWQHHGVTPQAVVGHSQGEIAAAYVAGALSLDDAARVVTLRSKSIAAHLAGKGGMLSLALSEDAVLERLAGFDGLSVAA VNGPTATVVSGDPVQIEELARACEADGVRARVIPVDYASHSRQVEIIESELAEVLAGLSPQAPRVPFFSTLEGAWITEPV LDGGYWYRNLRHRVGFAPAVETLATDEGFTHFVEVSAHPVLTMALPGTVTGLATLRRDNGGQDRLVASLAEAWAN ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 VAL n 1 3 GLY n 1 4 ARG n 1 5 VAL n 1 6 ALA n 1 7 PHE n 1 8 VAL n 1 9 PHE n 1 10 PRO n 1 11 GLY n 1 12 GLN n 1 13 GLY n 1 14 THR n 1 15 GLN n 1 16 TRP n 1 17 ALA n 1 18 GLY n 1 19 MET n 1 20 GLY n 1 21 ALA n 1 22 GLU n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 SER n 1 27 SER n 1 28 ALA n 1 29 VAL n 1 30 PHE n 1 31 ALA n 1 32 ALA n 1 33 ALA n 1 34 MET n 1 35 ALA n 1 36 GLU n 1 37 CYS n 1 38 GLU n 1 39 ALA n 1 40 ALA n 1 41 LEU n 1 42 SER n 1 43 PRO n 1 44 TYR n 1 45 VAL n 1 46 ASP n 1 47 TRP n 1 48 SER n 1 49 LEU n 1 50 GLU n 1 51 ALA n 1 52 VAL n 1 53 VAL n 1 54 ARG n 1 55 GLN n 1 56 ALA n 1 57 PRO n 1 58 GLY n 1 59 ALA n 1 60 PRO n 1 61 THR n 1 62 LEU n 1 63 GLU n 1 64 ARG n 1 65 VAL n 1 66 ASP n 1 67 VAL n 1 68 VAL n 1 69 GLN n 1 70 PRO n 1 71 VAL n 1 72 THR n 1 73 PHE n 1 74 ALA n 1 75 VAL n 1 76 MET n 1 77 VAL n 1 78 SER n 1 79 LEU n 1 80 ALA n 1 81 ARG n 1 82 VAL n 1 83 TRP n 1 84 GLN n 1 85 HIS n 1 86 HIS n 1 87 GLY n 1 88 VAL n 1 89 THR n 1 90 PRO n 1 91 GLN n 1 92 ALA n 1 93 VAL n 1 94 VAL n 1 95 GLY n 1 96 HIS n 1 97 SER n 1 98 GLN n 1 99 GLY n 1 100 GLU n 1 101 ILE n 1 102 ALA n 1 103 ALA n 1 104 ALA n 1 105 TYR n 1 106 VAL n 1 107 ALA n 1 108 GLY n 1 109 ALA n 1 110 LEU n 1 111 SER n 1 112 LEU n 1 113 ASP n 1 114 ASP n 1 115 ALA n 1 116 ALA n 1 117 ARG n 1 118 VAL n 1 119 VAL n 1 120 THR n 1 121 LEU n 1 122 ARG n 1 123 SER n 1 124 LYS n 1 125 SER n 1 126 ILE n 1 127 ALA n 1 128 ALA n 1 129 HIS n 1 130 LEU n 1 131 ALA n 1 132 GLY n 1 133 LYS n 1 134 GLY n 1 135 GLY n 1 136 MET n 1 137 LEU n 1 138 SER n 1 139 LEU n 1 140 ALA n 1 141 LEU n 1 142 SER n 1 143 GLU n 1 144 ASP n 1 145 ALA n 1 146 VAL n 1 147 LEU n 1 148 GLU n 1 149 ARG n 1 150 LEU n 1 151 ALA n 1 152 GLY n 1 153 PHE n 1 154 ASP n 1 155 GLY n 1 156 LEU n 1 157 SER n 1 158 VAL n 1 159 ALA n 1 160 ALA n 1 161 VAL n 1 162 ASN n 1 163 GLY n 1 164 PRO n 1 165 THR n 1 166 ALA n 1 167 THR n 1 168 VAL n 1 169 VAL n 1 170 SER n 1 171 GLY n 1 172 ASP n 1 173 PRO n 1 174 VAL n 1 175 GLN n 1 176 ILE n 1 177 GLU n 1 178 GLU n 1 179 LEU n 1 180 ALA n 1 181 ARG n 1 182 ALA n 1 183 CYS n 1 184 GLU n 1 185 ALA n 1 186 ASP n 1 187 GLY n 1 188 VAL n 1 189 ARG n 1 190 ALA n 1 191 ARG n 1 192 VAL n 1 193 ILE n 1 194 PRO n 1 195 VAL n 1 196 ASP n 1 197 TYR n 1 198 ALA n 1 199 SER n 1 200 HIS n 1 201 SER n 1 202 ARG n 1 203 GLN n 1 204 VAL n 1 205 GLU n 1 206 ILE n 1 207 ILE n 1 208 GLU n 1 209 SER n 1 210 GLU n 1 211 LEU n 1 212 ALA n 1 213 GLU n 1 214 VAL n 1 215 LEU n 1 216 ALA n 1 217 GLY n 1 218 LEU n 1 219 SER n 1 220 PRO n 1 221 GLN n 1 222 ALA n 1 223 PRO n 1 224 ARG n 1 225 VAL n 1 226 PRO n 1 227 PHE n 1 228 PHE n 1 229 SER n 1 230 THR n 1 231 LEU n 1 232 GLU n 1 233 GLY n 1 234 ALA n 1 235 TRP n 1 236 ILE n 1 237 THR n 1 238 GLU n 1 239 PRO n 1 240 VAL n 1 241 LEU n 1 242 ASP n 1 243 GLY n 1 244 GLY n 1 245 TYR n 1 246 TRP n 1 247 TYR n 1 248 ARG n 1 249 ASN n 1 250 LEU n 1 251 ARG n 1 252 HIS n 1 253 ARG n 1 254 VAL n 1 255 GLY n 1 256 PHE n 1 257 ALA n 1 258 PRO n 1 259 ALA n 1 260 VAL n 1 261 GLU n 1 262 THR n 1 263 LEU n 1 264 ALA n 1 265 THR n 1 266 ASP n 1 267 GLU n 1 268 GLY n 1 269 PHE n 1 270 THR n 1 271 HIS n 1 272 PHE n 1 273 VAL n 1 274 GLU n 1 275 VAL n 1 276 SER n 1 277 ALA n 1 278 HIS n 1 279 PRO n 1 280 VAL n 1 281 LEU n 1 282 THR n 1 283 MET n 1 284 ALA n 1 285 LEU n 1 286 PRO n 1 287 GLY n 1 288 THR n 1 289 VAL n 1 290 THR n 1 291 GLY n 1 292 LEU n 1 293 ALA n 1 294 THR n 1 295 LEU n 1 296 ARG n 1 297 ARG n 1 298 ASP n 1 299 ASN n 1 300 GLY n 1 301 GLY n 1 302 GLN n 1 303 ASP n 1 304 ARG n 1 305 LEU n 1 306 VAL n 1 307 ALA n 1 308 SER n 1 309 LEU n 1 310 ALA n 1 311 GLU n 1 312 ALA n 1 313 TRP n 1 314 ALA n 1 315 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 315 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pikAI _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces venezuelae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 54571 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 15439 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain K207-3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PIKA1_STRVZ _struct_ref.pdbx_db_accession Q9ZGI5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GVGRVAFVFPGQGTQWAGMGAELLDSSAVFAAAMAECEAALSPYVDWSLEAVVRQAPGAPTLERVDVVQPVTFAVMVSLA RVWQHHGVTPQAVVGHSQGEIAAAYVAGALSLDDAARVVTLRSKSIAAHLAGKGGMLSLALSEDAVLERLAGFDGLSVAA VNGPTATVVSGDPVQIEELARACEADGVRARVIPVDYASHSRQVEIIESELAEVLAGLSPQAPRVPFFSTLEGAWITEPV LDGGYWYRNLRHRVGFAPAVETLATDEGFTHFVEVSAHPVLTMALPGTVTGLATLRRDNGGQDRLVASLAEAWAN ; _struct_ref.pdbx_align_begin 628 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8CZC _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 315 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9ZGI5 _struct_ref_seq.db_align_beg 628 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 942 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 628 _struct_ref_seq.pdbx_auth_seq_align_end 942 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8CZC _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8CZC _struct.title 'AT from first module of the pikromycin synthase' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8CZC _struct_keywords.text 'acyltransferase, methylmalonyl-specific, polyketide synthase, BIOSYNTHETIC PROTEIN' _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 20 ? SER A 27 ? GLY B 647 SER B 654 1 ? 8 HELX_P HELX_P2 AA2 SER A 27 ? ASP A 46 ? SER B 654 ASP B 673 1 ? 20 HELX_P HELX_P3 AA3 SER A 48 ? ARG A 54 ? SER B 675 ARG B 681 1 ? 7 HELX_P HELX_P4 AA4 ARG A 64 ? HIS A 86 ? ARG B 691 HIS B 713 1 ? 23 HELX_P HELX_P5 AA5 GLN A 98 ? ALA A 107 ? GLN B 725 ALA B 734 1 ? 10 HELX_P HELX_P6 AA6 SER A 111 ? LEU A 130 ? SER B 738 LEU B 757 1 ? 20 HELX_P HELX_P7 AA7 SER A 142 ? LEU A 150 ? SER B 769 LEU B 777 1 ? 9 HELX_P HELX_P8 AA8 ASP A 172 ? ASP A 186 ? ASP B 799 ASP B 813 1 ? 15 HELX_P HELX_P9 AA9 ARG A 202 ? ILE A 206 ? ARG B 829 ILE B 833 5 ? 5 HELX_P HELX_P10 AB1 ILE A 207 ? LEU A 215 ? ILE B 834 LEU B 842 1 ? 9 HELX_P HELX_P11 AB2 ASP A 242 ? HIS A 252 ? ASP B 869 HIS B 879 1 ? 11 HELX_P HELX_P12 AB3 GLY A 255 ? ASP A 266 ? GLY B 882 ASP B 893 1 ? 12 HELX_P HELX_P13 AB4 LEU A 281 ? LEU A 285 ? LEU B 908 LEU B 912 5 ? 5 HELX_P HELX_P14 AB5 GLY A 301 ? ALA A 314 ? GLY B 928 ALA B 941 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 234 ? ILE A 236 ? ALA B 861 ILE B 863 AA1 2 PHE A 227 ? SER A 229 ? PHE B 854 SER B 856 AA1 3 ALA A 92 ? GLY A 95 ? ALA B 719 GLY B 722 AA1 4 ARG A 4 ? PHE A 9 ? ARG B 631 PHE B 636 AA1 5 PHE A 269 ? GLU A 274 ? PHE B 896 GLU B 901 AA1 6 THR A 290 ? LEU A 292 ? THR B 917 LEU B 919 AA2 1 LEU A 156 ? GLY A 163 ? LEU B 783 GLY B 790 AA2 2 ALA A 166 ? GLY A 171 ? ALA B 793 GLY B 798 AA2 3 GLY A 135 ? LEU A 139 ? GLY B 762 LEU B 766 AA2 4 ALA A 190 ? ILE A 193 ? ALA B 817 ILE B 820 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ALA A 234 ? O ALA B 861 N SER A 229 ? N SER B 856 AA1 2 3 O PHE A 228 ? O PHE B 855 N VAL A 93 ? N VAL B 720 AA1 3 4 O VAL A 94 ? O VAL B 721 N PHE A 7 ? N PHE B 634 AA1 4 5 N ALA A 6 ? N ALA B 633 O VAL A 273 ? O VAL B 900 AA1 5 6 N THR A 270 ? N THR B 897 O THR A 290 ? O THR B 917 AA2 1 2 N ALA A 159 ? N ALA B 786 O VAL A 168 ? O VAL B 795 AA2 2 3 O VAL A 169 ? O VAL B 796 N LEU A 137 ? N LEU B 764 AA2 3 4 N SER A 138 ? N SER B 765 O ARG A 191 ? O ARG B 818 # _atom_sites.entry_id 8CZC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 628 628 GLY GLY B . n A 1 2 VAL 2 629 629 VAL VAL B . n A 1 3 GLY 3 630 630 GLY GLY B . n A 1 4 ARG 4 631 631 ARG ARG B . n A 1 5 VAL 5 632 632 VAL VAL B . n A 1 6 ALA 6 633 633 ALA ALA B . n A 1 7 PHE 7 634 634 PHE PHE B . n A 1 8 VAL 8 635 635 VAL VAL B . n A 1 9 PHE 9 636 636 PHE PHE B . n A 1 10 PRO 10 637 637 PRO PRO B . n A 1 11 GLY 11 638 638 GLY GLY B . n A 1 12 GLN 12 639 639 GLN GLN B . n A 1 13 GLY 13 640 640 GLY GLY B . n A 1 14 THR 14 641 641 THR THR B . n A 1 15 GLN 15 642 642 GLN GLN B . n A 1 16 TRP 16 643 643 TRP TRP B . n A 1 17 ALA 17 644 644 ALA ALA B . n A 1 18 GLY 18 645 645 GLY GLY B . n A 1 19 MET 19 646 646 MET MET B . n A 1 20 GLY 20 647 647 GLY GLY B . n A 1 21 ALA 21 648 648 ALA ALA B . n A 1 22 GLU 22 649 649 GLU GLU B . n A 1 23 LEU 23 650 650 LEU LEU B . n A 1 24 LEU 24 651 651 LEU LEU B . n A 1 25 ASP 25 652 652 ASP ASP B . n A 1 26 SER 26 653 653 SER SER B . n A 1 27 SER 27 654 654 SER SER B . n A 1 28 ALA 28 655 655 ALA ALA B . n A 1 29 VAL 29 656 656 VAL VAL B . n A 1 30 PHE 30 657 657 PHE PHE B . n A 1 31 ALA 31 658 658 ALA ALA B . n A 1 32 ALA 32 659 659 ALA ALA B . n A 1 33 ALA 33 660 660 ALA ALA B . n A 1 34 MET 34 661 661 MET MET B . n A 1 35 ALA 35 662 662 ALA ALA B . n A 1 36 GLU 36 663 663 GLU GLU B . n A 1 37 CYS 37 664 664 CYS CYS B . n A 1 38 GLU 38 665 665 GLU GLU B . n A 1 39 ALA 39 666 666 ALA ALA B . n A 1 40 ALA 40 667 667 ALA ALA B . n A 1 41 LEU 41 668 668 LEU LEU B . n A 1 42 SER 42 669 669 SER SER B . n A 1 43 PRO 43 670 670 PRO PRO B . n A 1 44 TYR 44 671 671 TYR TYR B . n A 1 45 VAL 45 672 672 VAL VAL B . n A 1 46 ASP 46 673 673 ASP ASP B . n A 1 47 TRP 47 674 674 TRP TRP B . n A 1 48 SER 48 675 675 SER SER B . n A 1 49 LEU 49 676 676 LEU LEU B . n A 1 50 GLU 50 677 677 GLU GLU B . n A 1 51 ALA 51 678 678 ALA ALA B . n A 1 52 VAL 52 679 679 VAL VAL B . n A 1 53 VAL 53 680 680 VAL VAL B . n A 1 54 ARG 54 681 681 ARG ARG B . n A 1 55 GLN 55 682 682 GLN GLN B . n A 1 56 ALA 56 683 683 ALA ALA B . n A 1 57 PRO 57 684 684 PRO PRO B . n A 1 58 GLY 58 685 685 GLY GLY B . n A 1 59 ALA 59 686 686 ALA ALA B . n A 1 60 PRO 60 687 687 PRO PRO B . n A 1 61 THR 61 688 688 THR THR B . n A 1 62 LEU 62 689 689 LEU LEU B . n A 1 63 GLU 63 690 690 GLU GLU B . n A 1 64 ARG 64 691 691 ARG ARG B . n A 1 65 VAL 65 692 692 VAL VAL B . n A 1 66 ASP 66 693 693 ASP ASP B . n A 1 67 VAL 67 694 694 VAL VAL B . n A 1 68 VAL 68 695 695 VAL VAL B . n A 1 69 GLN 69 696 696 GLN GLN B . n A 1 70 PRO 70 697 697 PRO PRO B . n A 1 71 VAL 71 698 698 VAL VAL B . n A 1 72 THR 72 699 699 THR THR B . n A 1 73 PHE 73 700 700 PHE PHE B . n A 1 74 ALA 74 701 701 ALA ALA B . n A 1 75 VAL 75 702 702 VAL VAL B . n A 1 76 MET 76 703 703 MET MET B . n A 1 77 VAL 77 704 704 VAL VAL B . n A 1 78 SER 78 705 705 SER SER B . n A 1 79 LEU 79 706 706 LEU LEU B . n A 1 80 ALA 80 707 707 ALA ALA B . n A 1 81 ARG 81 708 708 ARG ARG B . n A 1 82 VAL 82 709 709 VAL VAL B . n A 1 83 TRP 83 710 710 TRP TRP B . n A 1 84 GLN 84 711 711 GLN GLN B . n A 1 85 HIS 85 712 712 HIS HIS B . n A 1 86 HIS 86 713 713 HIS HIS B . n A 1 87 GLY 87 714 714 GLY GLY B . n A 1 88 VAL 88 715 715 VAL VAL B . n A 1 89 THR 89 716 716 THR THR B . n A 1 90 PRO 90 717 717 PRO PRO B . n A 1 91 GLN 91 718 718 GLN GLN B . n A 1 92 ALA 92 719 719 ALA ALA B . n A 1 93 VAL 93 720 720 VAL VAL B . n A 1 94 VAL 94 721 721 VAL VAL B . n A 1 95 GLY 95 722 722 GLY GLY B . n A 1 96 HIS 96 723 723 HIS HIS B . n A 1 97 SER 97 724 724 SER SER B . n A 1 98 GLN 98 725 725 GLN GLN B . n A 1 99 GLY 99 726 726 GLY GLY B . n A 1 100 GLU 100 727 727 GLU GLU B . n A 1 101 ILE 101 728 728 ILE ILE B . n A 1 102 ALA 102 729 729 ALA ALA B . n A 1 103 ALA 103 730 730 ALA ALA B . n A 1 104 ALA 104 731 731 ALA ALA B . n A 1 105 TYR 105 732 732 TYR TYR B . n A 1 106 VAL 106 733 733 VAL VAL B . n A 1 107 ALA 107 734 734 ALA ALA B . n A 1 108 GLY 108 735 735 GLY GLY B . n A 1 109 ALA 109 736 736 ALA ALA B . n A 1 110 LEU 110 737 737 LEU LEU B . n A 1 111 SER 111 738 738 SER SER B . n A 1 112 LEU 112 739 739 LEU LEU B . n A 1 113 ASP 113 740 740 ASP ASP B . n A 1 114 ASP 114 741 741 ASP ASP B . n A 1 115 ALA 115 742 742 ALA ALA B . n A 1 116 ALA 116 743 743 ALA ALA B . n A 1 117 ARG 117 744 744 ARG ARG B . n A 1 118 VAL 118 745 745 VAL VAL B . n A 1 119 VAL 119 746 746 VAL VAL B . n A 1 120 THR 120 747 747 THR THR B . n A 1 121 LEU 121 748 748 LEU LEU B . n A 1 122 ARG 122 749 749 ARG ARG B . n A 1 123 SER 123 750 750 SER SER B . n A 1 124 LYS 124 751 751 LYS LYS B . n A 1 125 SER 125 752 752 SER SER B . n A 1 126 ILE 126 753 753 ILE ILE B . n A 1 127 ALA 127 754 754 ALA ALA B . n A 1 128 ALA 128 755 755 ALA ALA B . n A 1 129 HIS 129 756 756 HIS HIS B . n A 1 130 LEU 130 757 757 LEU LEU B . n A 1 131 ALA 131 758 758 ALA ALA B . n A 1 132 GLY 132 759 759 GLY GLY B . n A 1 133 LYS 133 760 760 LYS LYS B . n A 1 134 GLY 134 761 761 GLY GLY B . n A 1 135 GLY 135 762 762 GLY GLY B . n A 1 136 MET 136 763 763 MET MET B . n A 1 137 LEU 137 764 764 LEU LEU B . n A 1 138 SER 138 765 765 SER SER B . n A 1 139 LEU 139 766 766 LEU LEU B . n A 1 140 ALA 140 767 767 ALA ALA B . n A 1 141 LEU 141 768 768 LEU LEU B . n A 1 142 SER 142 769 769 SER SER B . n A 1 143 GLU 143 770 770 GLU GLU B . n A 1 144 ASP 144 771 771 ASP ASP B . n A 1 145 ALA 145 772 772 ALA ALA B . n A 1 146 VAL 146 773 773 VAL VAL B . n A 1 147 LEU 147 774 774 LEU LEU B . n A 1 148 GLU 148 775 775 GLU GLU B . n A 1 149 ARG 149 776 776 ARG ARG B . n A 1 150 LEU 150 777 777 LEU LEU B . n A 1 151 ALA 151 778 778 ALA ALA B . n A 1 152 GLY 152 779 779 GLY GLY B . n A 1 153 PHE 153 780 780 PHE PHE B . n A 1 154 ASP 154 781 781 ASP ASP B . n A 1 155 GLY 155 782 782 GLY GLY B . n A 1 156 LEU 156 783 783 LEU LEU B . n A 1 157 SER 157 784 784 SER SER B . n A 1 158 VAL 158 785 785 VAL VAL B . n A 1 159 ALA 159 786 786 ALA ALA B . n A 1 160 ALA 160 787 787 ALA ALA B . n A 1 161 VAL 161 788 788 VAL VAL B . n A 1 162 ASN 162 789 789 ASN ASN B . n A 1 163 GLY 163 790 790 GLY GLY B . n A 1 164 PRO 164 791 791 PRO PRO B . n A 1 165 THR 165 792 792 THR THR B . n A 1 166 ALA 166 793 793 ALA ALA B . n A 1 167 THR 167 794 794 THR THR B . n A 1 168 VAL 168 795 795 VAL VAL B . n A 1 169 VAL 169 796 796 VAL VAL B . n A 1 170 SER 170 797 797 SER SER B . n A 1 171 GLY 171 798 798 GLY GLY B . n A 1 172 ASP 172 799 799 ASP ASP B . n A 1 173 PRO 173 800 800 PRO PRO B . n A 1 174 VAL 174 801 801 VAL VAL B . n A 1 175 GLN 175 802 802 GLN GLN B . n A 1 176 ILE 176 803 803 ILE ILE B . n A 1 177 GLU 177 804 804 GLU GLU B . n A 1 178 GLU 178 805 805 GLU GLU B . n A 1 179 LEU 179 806 806 LEU LEU B . n A 1 180 ALA 180 807 807 ALA ALA B . n A 1 181 ARG 181 808 808 ARG ARG B . n A 1 182 ALA 182 809 809 ALA ALA B . n A 1 183 CYS 183 810 810 CYS CYS B . n A 1 184 GLU 184 811 811 GLU GLU B . n A 1 185 ALA 185 812 812 ALA ALA B . n A 1 186 ASP 186 813 813 ASP ASP B . n A 1 187 GLY 187 814 814 GLY GLY B . n A 1 188 VAL 188 815 815 VAL VAL B . n A 1 189 ARG 189 816 816 ARG ARG B . n A 1 190 ALA 190 817 817 ALA ALA B . n A 1 191 ARG 191 818 818 ARG ARG B . n A 1 192 VAL 192 819 819 VAL VAL B . n A 1 193 ILE 193 820 820 ILE ILE B . n A 1 194 PRO 194 821 821 PRO PRO B . n A 1 195 VAL 195 822 822 VAL VAL B . n A 1 196 ASP 196 823 823 ASP ASP B . n A 1 197 TYR 197 824 824 TYR TYR B . n A 1 198 ALA 198 825 825 ALA ALA B . n A 1 199 SER 199 826 826 SER SER B . n A 1 200 HIS 200 827 827 HIS HIS B . n A 1 201 SER 201 828 828 SER SER B . n A 1 202 ARG 202 829 829 ARG ARG B . n A 1 203 GLN 203 830 830 GLN GLN B . n A 1 204 VAL 204 831 831 VAL VAL B . n A 1 205 GLU 205 832 832 GLU GLU B . n A 1 206 ILE 206 833 833 ILE ILE B . n A 1 207 ILE 207 834 834 ILE ILE B . n A 1 208 GLU 208 835 835 GLU GLU B . n A 1 209 SER 209 836 836 SER SER B . n A 1 210 GLU 210 837 837 GLU GLU B . n A 1 211 LEU 211 838 838 LEU LEU B . n A 1 212 ALA 212 839 839 ALA ALA B . n A 1 213 GLU 213 840 840 GLU GLU B . n A 1 214 VAL 214 841 841 VAL VAL B . n A 1 215 LEU 215 842 842 LEU LEU B . n A 1 216 ALA 216 843 843 ALA ALA B . n A 1 217 GLY 217 844 844 GLY GLY B . n A 1 218 LEU 218 845 845 LEU LEU B . n A 1 219 SER 219 846 846 SER SER B . n A 1 220 PRO 220 847 847 PRO PRO B . n A 1 221 GLN 221 848 848 GLN GLN B . n A 1 222 ALA 222 849 849 ALA ALA B . n A 1 223 PRO 223 850 850 PRO PRO B . n A 1 224 ARG 224 851 851 ARG ARG B . n A 1 225 VAL 225 852 852 VAL VAL B . n A 1 226 PRO 226 853 853 PRO PRO B . n A 1 227 PHE 227 854 854 PHE PHE B . n A 1 228 PHE 228 855 855 PHE PHE B . n A 1 229 SER 229 856 856 SER SER B . n A 1 230 THR 230 857 857 THR THR B . n A 1 231 LEU 231 858 858 LEU LEU B . n A 1 232 GLU 232 859 859 GLU GLU B . n A 1 233 GLY 233 860 860 GLY GLY B . n A 1 234 ALA 234 861 861 ALA ALA B . n A 1 235 TRP 235 862 862 TRP TRP B . n A 1 236 ILE 236 863 863 ILE ILE B . n A 1 237 THR 237 864 864 THR THR B . n A 1 238 GLU 238 865 865 GLU GLU B . n A 1 239 PRO 239 866 866 PRO PRO B . n A 1 240 VAL 240 867 867 VAL VAL B . n A 1 241 LEU 241 868 868 LEU LEU B . n A 1 242 ASP 242 869 869 ASP ASP B . n A 1 243 GLY 243 870 870 GLY GLY B . n A 1 244 GLY 244 871 871 GLY GLY B . n A 1 245 TYR 245 872 872 TYR TYR B . n A 1 246 TRP 246 873 873 TRP TRP B . n A 1 247 TYR 247 874 874 TYR TYR B . n A 1 248 ARG 248 875 875 ARG ARG B . n A 1 249 ASN 249 876 876 ASN ASN B . n A 1 250 LEU 250 877 877 LEU LEU B . n A 1 251 ARG 251 878 878 ARG ARG B . n A 1 252 HIS 252 879 879 HIS HIS B . n A 1 253 ARG 253 880 880 ARG ARG B . n A 1 254 VAL 254 881 881 VAL VAL B . n A 1 255 GLY 255 882 882 GLY GLY B . n A 1 256 PHE 256 883 883 PHE PHE B . n A 1 257 ALA 257 884 884 ALA ALA B . n A 1 258 PRO 258 885 885 PRO PRO B . n A 1 259 ALA 259 886 886 ALA ALA B . n A 1 260 VAL 260 887 887 VAL VAL B . n A 1 261 GLU 261 888 888 GLU GLU B . n A 1 262 THR 262 889 889 THR THR B . n A 1 263 LEU 263 890 890 LEU LEU B . n A 1 264 ALA 264 891 891 ALA ALA B . n A 1 265 THR 265 892 892 THR THR B . n A 1 266 ASP 266 893 893 ASP ASP B . n A 1 267 GLU 267 894 894 GLU GLU B . n A 1 268 GLY 268 895 895 GLY GLY B . n A 1 269 PHE 269 896 896 PHE PHE B . n A 1 270 THR 270 897 897 THR THR B . n A 1 271 HIS 271 898 898 HIS HIS B . n A 1 272 PHE 272 899 899 PHE PHE B . n A 1 273 VAL 273 900 900 VAL VAL B . n A 1 274 GLU 274 901 901 GLU GLU B . n A 1 275 VAL 275 902 902 VAL VAL B . n A 1 276 SER 276 903 903 SER SER B . n A 1 277 ALA 277 904 904 ALA ALA B . n A 1 278 HIS 278 905 905 HIS HIS B . n A 1 279 PRO 279 906 906 PRO PRO B . n A 1 280 VAL 280 907 907 VAL VAL B . n A 1 281 LEU 281 908 908 LEU LEU B . n A 1 282 THR 282 909 909 THR THR B . n A 1 283 MET 283 910 910 MET MET B . n A 1 284 ALA 284 911 911 ALA ALA B . n A 1 285 LEU 285 912 912 LEU LEU B . n A 1 286 PRO 286 913 913 PRO PRO B . n A 1 287 GLY 287 914 914 GLY GLY B . n A 1 288 THR 288 915 915 THR THR B . n A 1 289 VAL 289 916 916 VAL VAL B . n A 1 290 THR 290 917 917 THR THR B . n A 1 291 GLY 291 918 918 GLY GLY B . n A 1 292 LEU 292 919 919 LEU LEU B . n A 1 293 ALA 293 920 920 ALA ALA B . n A 1 294 THR 294 921 921 THR THR B . n A 1 295 LEU 295 922 922 LEU LEU B . n A 1 296 ARG 296 923 923 ARG ARG B . n A 1 297 ARG 297 924 924 ARG ARG B . n A 1 298 ASP 298 925 925 ASP ASP B . n A 1 299 ASN 299 926 926 ASN ASN B . n A 1 300 GLY 300 927 927 GLY GLY B . n A 1 301 GLY 301 928 928 GLY GLY B . n A 1 302 GLN 302 929 929 GLN GLN B . n A 1 303 ASP 303 930 930 ASP ASP B . n A 1 304 ARG 304 931 931 ARG ARG B . n A 1 305 LEU 305 932 932 LEU LEU B . n A 1 306 VAL 306 933 933 VAL VAL B . n A 1 307 ALA 307 934 934 ALA ALA B . n A 1 308 SER 308 935 935 SER SER B . n A 1 309 LEU 309 936 936 LEU LEU B . n A 1 310 ALA 310 937 937 ALA ALA B . n A 1 311 GLU 311 938 938 GLU GLU B . n A 1 312 ALA 312 939 939 ALA ALA B . n A 1 313 TRP 313 940 940 TRP TRP B . n A 1 314 ALA 314 941 941 ALA ALA B . n A 1 315 ASN 315 942 942 ASN ASN B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email adriankc@utexas.edu _pdbx_contact_author.name_first Adrian _pdbx_contact_author.name_last Keatinge-Clay _pdbx_contact_author.name_mi T _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4358-7628 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-08 2 'Structure model' 1 1 2022-07-06 3 'Structure model' 1 2 2022-09-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_citation.journal_volume' 6 3 'Structure model' '_citation.page_first' # _em_3d_fitting.entry_id 8CZC _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria Phenix _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 2QO3 # _em_3d_reconstruction.entry_id 8CZC _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details 'Maps were density modified using Phenix to a calculated resolution of 2.77 Angstroms.' _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.num_particles 184737 _em_3d_reconstruction.resolution 2.86 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details 'Buffer was made fresh because TCEP rapidly degrades in phosphate' _em_buffer.pH 7.5 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ;Polyketide synthase engineered from the first, second, and seventh modules of the pikromycin synthase as described in Miyazawa et al., 2021, Chem. Commun. 57:8762-8765 ; _em_entity_assembly.name Pik127 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 8CZC _em_image_scans.id 1 _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 100 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 8CZC _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'ZEMLIN TABLEAU' _em_imaging.c2_aperture_diameter 70 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification 61728 _em_imaging.cryogen NITROGEN _em_imaging.details 'Collected 4284 movies at 0 degrees tilt and 2912 movies at -30 degrees tilt' _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 1500 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-2/2 _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 277.15 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ;Blotted for 3 seconds with a force of "1" before plunging. ; _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 8CZC _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 8CZC _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8CZC _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO B 670 ? ? -67.89 13.15 2 1 TYR B 671 ? ? -139.49 -35.07 3 1 ASP B 673 ? ? 71.34 -33.45 4 1 LEU B 689 ? ? 55.93 11.23 5 1 SER B 724 ? ? 57.28 -124.01 6 1 HIS B 756 ? ? -140.47 -38.51 7 1 PRO B 791 ? ? -72.97 24.72 8 1 THR B 792 ? ? -140.11 -22.45 9 1 PRO B 821 ? ? -69.88 75.57 10 1 PRO B 866 ? ? -69.39 63.54 11 1 LEU B 868 ? ? -110.29 52.10 12 1 ASP B 893 ? ? -85.99 -76.18 13 1 MET B 910 ? ? -80.75 41.34 14 1 ALA B 911 ? ? -154.53 -11.25 15 1 THR B 921 ? ? -114.74 -78.59 16 1 ASP B 925 ? ? 64.65 -13.85 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 200 mM K3PO4 'potassium phosphate' 1 2 0.5 mM C9H15O6P TCEP 1 3 3 mM C25H40N7O19P3S methylmalonyl-CoA 1 4 1 mM C21H30N7O17P3 NADPH # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details 'CTF correction performed by cryosparc during reconstruction' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.41 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 54571 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Streptomyces venezuelae' _em_entity_assembly_naturalsource.strain 15439 _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain K207-3 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 70 _em_image_recording.average_exposure_time 5 _em_image_recording.details '20 frames per second' _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 7196 _em_image_recording.avg_electron_dose_per_subtomogram ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details 'From blob picker, 6,761,206 particles were selected. Then, from template picker, 2,350,020 particles were selected.' _em_particle_selection.method ? _em_particle_selection.num_particles_selected 6761206 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? cryoSPARC 3.2.0 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? 'UCSF ChimeraX' 1.1.1 ? 1 ? 8 'MODEL FITTING' ? PHENIX 1.19.2-4158 ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'MODEL REFINEMENT' ? Coot 0.8.9.2 ? 1 ? 11 'MODEL REFINEMENT' ? PHENIX 1.19.2-4158 ? 1 ? 12 'INITIAL EULER ASSIGNMENT' ? cryoSPARC 3.2.0 1 ? ? 13 'FINAL EULER ASSIGNMENT' ? cryoSPARC 3.2.0 1 ? ? 14 CLASSIFICATION ? cryoSPARC 3.2.0 1 ? ? 15 RECONSTRUCTION ? cryoSPARC 3.2.0 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 1.5 _em_specimen.details ;This sample was monodisperse. It was incubated with its substrates, methylmalonyl-CoA and NADPH, for 30 min. at 25 C before freezing. ; _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM106112 1 'Welch Foundation' 'United States' F-1712 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'This AT is functional since the engineered polyketide synthase, Pik127, that relies on it synthesizes a triketide lactone product.' #