HEADER APOPTOSIS 24-MAY-22 8CZH TITLE HUMAN BAK IN COMPLEX WITH THE DM2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2 HOMOLOGOUS ANTAGONIST/KILLER; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: APOPTOSIS REGULATOR BAK,BCL-2-LIKE PROTEIN 7,BCL2-L-7; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DM2 PEPTIDE; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAK1, BAK, BCL2L7, CDN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS BAK, ACTIVATOR, BCL-2 FAMILY, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR F.AGUILAR,A.E.KEATING REVDAT 4 25-OCT-23 8CZH 1 REMARK REVDAT 3 15-MAR-23 8CZH 1 JRNL REVDAT 2 08-FEB-23 8CZH 1 JRNL REVDAT 1 11-JAN-23 8CZH 0 JRNL AUTH F.AGUILAR,S.YU,R.A.GRANT,S.SWANSON,D.GHOSE,B.G.SU, JRNL AUTH 2 K.A.SAROSIEK,A.E.KEATING JRNL TITL PEPTIDES FROM HUMAN BNIP5 AND PXT1 AND NON-NATIVE BINDERS OF JRNL TITL 2 PRO-APOPTOTIC BAK CAN DIRECTLY ACTIVATE OR INHIBIT JRNL TITL 3 BAK-MEDIATED MEMBRANE PERMEABILIZATION. JRNL REF STRUCTURE V. 31 265 2023 JRNL REFN ISSN 0969-2126 JRNL PMID 36706751 JRNL DOI 10.1016/J.STR.2023.01.001 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 46367 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.330 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9200 - 3.1300 0.99 3341 148 0.1595 0.1731 REMARK 3 2 3.1300 - 2.4900 1.00 3292 148 0.1736 0.1973 REMARK 3 3 2.4900 - 2.1700 0.98 3246 152 0.1469 0.1584 REMARK 3 4 2.1700 - 1.9700 0.98 3218 143 0.1634 0.2167 REMARK 3 5 1.9700 - 1.8300 0.98 3195 148 0.1739 0.1826 REMARK 3 6 1.8300 - 1.7200 0.98 3220 153 0.1934 0.2318 REMARK 3 7 1.7200 - 1.6400 0.98 3209 134 0.2128 0.2734 REMARK 3 8 1.6400 - 1.5700 0.94 3053 146 0.2087 0.2360 REMARK 3 9 1.5700 - 1.5100 0.96 3179 138 0.2244 0.2410 REMARK 3 10 1.5100 - 1.4500 0.96 3108 142 0.2464 0.2836 REMARK 3 11 1.4500 - 1.4100 0.97 3157 131 0.3116 0.3802 REMARK 3 12 1.4100 - 1.3700 0.96 3135 152 0.3570 0.3777 REMARK 3 13 1.3700 - 1.3300 0.95 3082 126 0.3649 0.3637 REMARK 3 14 1.3300 - 1.3000 0.90 2926 145 0.3970 0.3740 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4252 6.7010 0.9210 REMARK 3 T TENSOR REMARK 3 T11: 0.1980 T22: 0.2490 REMARK 3 T33: 0.1775 T12: -0.0190 REMARK 3 T13: 0.0179 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 3.7659 L22: 3.6580 REMARK 3 L33: 1.3212 L12: -0.1914 REMARK 3 L13: 0.4686 L23: -0.6075 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.0642 S13: 0.0233 REMARK 3 S21: -0.1811 S22: 0.0194 S23: -0.0260 REMARK 3 S31: -0.1098 S32: -0.0842 S33: 0.0031 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9265 6.8088 -5.7850 REMARK 3 T TENSOR REMARK 3 T11: 0.2862 T22: 0.3005 REMARK 3 T33: 0.2866 T12: 0.0181 REMARK 3 T13: 0.0256 T23: -0.0631 REMARK 3 L TENSOR REMARK 3 L11: 3.9830 L22: 7.5295 REMARK 3 L33: 3.0766 L12: 5.4741 REMARK 3 L13: -2.8381 L23: -3.9417 REMARK 3 S TENSOR REMARK 3 S11: -0.3344 S12: 0.5956 S13: -0.3825 REMARK 3 S21: -0.7825 S22: 0.3665 S23: -0.4202 REMARK 3 S31: 0.3201 S32: 0.0185 S33: -0.0598 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5749 2.6093 5.3045 REMARK 3 T TENSOR REMARK 3 T11: 0.2128 T22: 0.2643 REMARK 3 T33: 0.2356 T12: -0.0088 REMARK 3 T13: 0.0313 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 1.8703 L22: 3.5726 REMARK 3 L33: 6.7863 L12: -0.2045 REMARK 3 L13: 1.5906 L23: 1.7051 REMARK 3 S TENSOR REMARK 3 S11: 0.0858 S12: -0.2307 S13: -0.1070 REMARK 3 S21: 0.1218 S22: 0.0131 S23: 0.2028 REMARK 3 S31: -0.0934 S32: -0.4463 S33: -0.1237 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9800 12.3180 19.0702 REMARK 3 T TENSOR REMARK 3 T11: 0.5658 T22: 0.4644 REMARK 3 T33: 0.2882 T12: -0.0457 REMARK 3 T13: -0.0584 T23: -0.0462 REMARK 3 L TENSOR REMARK 3 L11: 3.4506 L22: 5.1162 REMARK 3 L33: 2.2956 L12: 3.9343 REMARK 3 L13: -1.6566 L23: -0.9506 REMARK 3 S TENSOR REMARK 3 S11: 0.4323 S12: -0.7999 S13: 0.0278 REMARK 3 S21: 1.0457 S22: -0.4996 S23: -0.2167 REMARK 3 S31: -0.2774 S32: -0.0398 S33: 0.1021 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8607 9.5974 8.6045 REMARK 3 T TENSOR REMARK 3 T11: 0.2113 T22: 0.2302 REMARK 3 T33: 0.3196 T12: -0.0230 REMARK 3 T13: -0.0418 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 6.0966 L22: 8.1595 REMARK 3 L33: 4.3287 L12: 1.3566 REMARK 3 L13: -0.9266 L23: -0.4930 REMARK 3 S TENSOR REMARK 3 S11: 0.2798 S12: -0.2916 S13: 0.3105 REMARK 3 S21: 0.2487 S22: -0.2315 S23: -0.8270 REMARK 3 S31: -0.2592 S32: 0.3873 S33: -0.0450 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4680 8.2708 9.0443 REMARK 3 T TENSOR REMARK 3 T11: 0.2163 T22: 0.2372 REMARK 3 T33: 0.2016 T12: -0.0063 REMARK 3 T13: -0.0381 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 2.2497 L22: 6.2723 REMARK 3 L33: 1.1732 L12: 0.0446 REMARK 3 L13: 0.1678 L23: -0.3711 REMARK 3 S TENSOR REMARK 3 S11: 0.0447 S12: -0.1515 S13: 0.0941 REMARK 3 S21: 0.6549 S22: -0.0959 S23: -0.5441 REMARK 3 S31: -0.1525 S32: 0.0015 S33: 0.1005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6349 -2.9963 2.6889 REMARK 3 T TENSOR REMARK 3 T11: 0.1964 T22: 0.2248 REMARK 3 T33: 0.2236 T12: -0.0074 REMARK 3 T13: 0.0087 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 2.9345 L22: 5.0720 REMARK 3 L33: 0.4437 L12: 1.6468 REMARK 3 L13: 0.3160 L23: 0.0820 REMARK 3 S TENSOR REMARK 3 S11: 0.0134 S12: 0.0200 S13: -0.3358 REMARK 3 S21: -0.1074 S22: 0.0490 S23: -0.5111 REMARK 3 S31: 0.0751 S32: -0.0182 S33: -0.0656 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3796 2.4062 18.8466 REMARK 3 T TENSOR REMARK 3 T11: 0.4353 T22: 0.4080 REMARK 3 T33: 0.2285 T12: -0.0127 REMARK 3 T13: -0.1089 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 3.8128 L22: 5.0412 REMARK 3 L33: 3.4509 L12: 3.9386 REMARK 3 L13: 1.4041 L23: 1.6580 REMARK 3 S TENSOR REMARK 3 S11: 0.4560 S12: -0.8200 S13: -0.4635 REMARK 3 S21: 0.9677 S22: -0.4527 S23: -0.4425 REMARK 3 S31: 0.2669 S32: -0.0146 S33: -0.0335 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CZH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265750. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46424 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 46.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 6.913 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.85 REMARK 200 R MERGE FOR SHELL (I) : 1.71400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5VX0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.5 M SODIUM FORMATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.06500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.52000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.06500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.52000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 PRO A 18 REMARK 465 LEU A 19 REMARK 465 GLU A 48 REMARK 465 ALA A 49 REMARK 465 GLU A 50 REMARK 465 GLY A 51 REMARK 465 VAL A 52 REMARK 465 ALA A 53 REMARK 465 ALA A 54 REMARK 465 GLY A 184 REMARK 465 ASN A 185 REMARK 465 GLY A 186 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 87 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 94 CG CD OE1 NE2 REMARK 470 GLN A 98 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN A 182 O HOH A 201 1.60 REMARK 500 O HOH A 209 O HOH A 235 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 96 CG - SD - CE ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG B 23 O - C - N ANGL. DEV. = -21.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 8CZH A 23 186 UNP Q16611 BAK_HUMAN 23 186 DBREF 8CZH B 0 24 PDB 8CZH 8CZH 0 24 SEQADV 8CZH GLY A 17 UNP Q16611 EXPRESSION TAG SEQADV 8CZH PRO A 18 UNP Q16611 EXPRESSION TAG SEQADV 8CZH LEU A 19 UNP Q16611 EXPRESSION TAG SEQADV 8CZH GLY A 20 UNP Q16611 EXPRESSION TAG SEQADV 8CZH SER A 21 UNP Q16611 EXPRESSION TAG SEQADV 8CZH MET A 22 UNP Q16611 EXPRESSION TAG SEQADV 8CZH SER A 166 UNP Q16611 CYS 166 ENGINEERED MUTATION SEQRES 1 A 170 GLY PRO LEU GLY SER MET SER GLU GLU GLN VAL ALA GLN SEQRES 2 A 170 ASP THR GLU GLU VAL PHE ARG SER TYR VAL PHE TYR ARG SEQRES 3 A 170 HIS GLN GLN GLU GLN GLU ALA GLU GLY VAL ALA ALA PRO SEQRES 4 A 170 ALA ASP PRO GLU MET VAL THR LEU PRO LEU GLN PRO SER SEQRES 5 A 170 SER THR MET GLY GLN VAL GLY ARG GLN LEU ALA ILE ILE SEQRES 6 A 170 GLY ASP ASP ILE ASN ARG ARG TYR ASP SER GLU PHE GLN SEQRES 7 A 170 THR MET LEU GLN HIS LEU GLN PRO THR ALA GLU ASN ALA SEQRES 8 A 170 TYR GLU TYR PHE THR LYS ILE ALA THR SER LEU PHE GLU SEQRES 9 A 170 SER GLY ILE ASN TRP GLY ARG VAL VAL ALA LEU LEU GLY SEQRES 10 A 170 PHE GLY TYR ARG LEU ALA LEU HIS VAL TYR GLN HIS GLY SEQRES 11 A 170 LEU THR GLY PHE LEU GLY GLN VAL THR ARG PHE VAL VAL SEQRES 12 A 170 ASP PHE MET LEU HIS HIS SER ILE ALA ARG TRP ILE ALA SEQRES 13 A 170 GLN ARG GLY GLY TRP VAL ALA ALA LEU ASN LEU GLY ASN SEQRES 14 A 170 GLY SEQRES 1 B 25 ACE ALA PRO TYR LEU GLU GLN VAL ALA ARG THR LEU ARG SEQRES 2 B 25 LYS ILE GLY GLU GLU ILE ASN GLU ALA LEU ARG NH2 HET ACE B 0 3 HET NH2 B 24 3 HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP FORMUL 2 ACE C2 H4 O FORMUL 2 NH2 H2 N FORMUL 3 HOH *110(H2 O) HELIX 1 AA1 SER A 23 GLN A 47 1 25 HELIX 2 AA2 ASP A 57 THR A 62 5 6 HELIX 3 AA3 SER A 69 GLN A 101 1 33 HELIX 4 AA4 ASN A 106 GLU A 120 1 15 HELIX 5 AA5 ASN A 124 HIS A 145 1 22 HELIX 6 AA6 PHE A 150 HIS A 165 1 16 HELIX 7 AA7 SER A 166 ARG A 174 1 9 HELIX 8 AA8 GLY A 175 ASN A 182 5 8 HELIX 9 AA9 ALA B 1 ARG B 23 1 23 LINK C ACE B 0 N ALA B 1 1555 1555 1.35 LINK C ARG B 23 N NH2 B 24 1555 1555 1.43 CRYST1 102.130 41.040 47.020 90.00 93.64 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009791 0.000000 0.000623 0.00000 SCALE2 0.000000 0.024366 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021311 0.00000