HEADER TRANSFERASE 26-MAY-22 8D0S TITLE HUMAN FUT9 BOUND TO GDP AND LNNT COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-GALACTOSYL-N-ACETYLGLUCOSAMINIDE 3-ALPHA-L- COMPND 3 FUCOSYLTRANSFERASE 9; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: FUCOSYLTRANSFERASE 9,FUCOSYLTRANSFERASE IX,FUC-TIX,FUCT-IX, COMPND 6 GALACTOSIDE 3-L-FUCOSYLTRANSFERASE; COMPND 7 EC: 2.4.1.152; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FUT9; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S KEYWDS GLYCOSYLTRANSFERASE, ALPHA-(1, 3)-FUCOSYLTRANSFERASE, GT 10, GT-B KEYWDS 2 FOLD, INVERTING MECHANISM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.KADIRVELRAJ,Z.A.WOOD REVDAT 4 25-OCT-23 8D0S 1 REMARK REVDAT 3 09-AUG-23 8D0S 1 JRNL REVDAT 2 31-MAY-23 8D0S 1 JRNL REVDAT 1 24-MAY-23 8D0S 0 JRNL AUTH R.KADIRVELRAJ,B.M.BORUAH,S.WANG,D.CHAPLA,C.HUANG,A.RAMIAH, JRNL AUTH 2 K.L.HUDSON,A.R.PRUDDEN,G.J.BOONS,S.G.WITHERS,Z.A.WOOD, JRNL AUTH 3 K.W.MOREMEN JRNL TITL STRUCTURAL BASIS FOR LEWIS ANTIGEN SYNTHESIS BY THE ALPHA JRNL TITL 2 1,3-FUCOSYLTRANSFERASE FUT9. JRNL REF NAT.CHEM.BIOL. V. 19 1022 2023 JRNL REFN ESSN 1552-4469 JRNL PMID 37202521 JRNL DOI 10.1038/S41589-023-01345-Y REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 71487 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7000 - 4.0571 0.99 2720 145 0.1680 0.1807 REMARK 3 2 4.0571 - 3.2209 1.00 2661 142 0.1492 0.1589 REMARK 3 3 3.2209 - 2.8139 1.00 2648 140 0.1723 0.1923 REMARK 3 4 2.8139 - 2.5567 1.00 2603 139 0.1668 0.1940 REMARK 3 5 2.5567 - 2.3735 1.00 2657 140 0.1560 0.1991 REMARK 3 6 2.3735 - 2.2336 1.00 2604 137 0.1480 0.1488 REMARK 3 7 2.2336 - 2.1217 1.00 2606 135 0.1409 0.1661 REMARK 3 8 2.1217 - 2.0294 1.00 2656 136 0.1358 0.1589 REMARK 3 9 2.0294 - 1.9512 1.00 2569 137 0.1414 0.1747 REMARK 3 10 1.9512 - 1.8839 1.00 2623 141 0.1329 0.1598 REMARK 3 11 1.8839 - 1.8250 1.00 2615 138 0.1365 0.1652 REMARK 3 12 1.8250 - 1.7728 1.00 2592 135 0.1330 0.1869 REMARK 3 13 1.7728 - 1.7262 1.00 2605 134 0.1419 0.1550 REMARK 3 14 1.7262 - 1.6841 1.00 2584 140 0.1387 0.1984 REMARK 3 15 1.6841 - 1.6458 1.00 2591 138 0.1449 0.2040 REMARK 3 16 1.6458 - 1.6107 1.00 2626 138 0.1462 0.1811 REMARK 3 17 1.6107 - 1.5785 1.00 2587 138 0.1567 0.2170 REMARK 3 18 1.5785 - 1.5487 1.00 2577 137 0.1584 0.1986 REMARK 3 19 1.5487 - 1.5211 1.00 2624 140 0.1627 0.2022 REMARK 3 20 1.5211 - 1.4953 1.00 2566 137 0.1702 0.1923 REMARK 3 21 1.4953 - 1.4712 1.00 2628 138 0.1845 0.2325 REMARK 3 22 1.4712 - 1.4485 1.00 2594 134 0.2002 0.2590 REMARK 3 23 1.4485 - 1.4272 1.00 2536 137 0.2082 0.2395 REMARK 3 24 1.4272 - 1.4071 1.00 2620 138 0.2273 0.2744 REMARK 3 25 1.4071 - 1.3881 1.00 2585 141 0.2452 0.3173 REMARK 3 26 1.3881 - 1.3701 1.00 2618 137 0.2572 0.2629 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2799 REMARK 3 ANGLE : 0.968 3843 REMARK 3 CHIRALITY : 0.080 420 REMARK 3 PLANARITY : 0.006 467 REMARK 3 DIHEDRAL : 14.062 1046 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8D0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000264703. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI (111) ROSENBAUM-ROCK DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71501 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 36.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 22.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 8D0O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 100 MM TRIS PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.58000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.58000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.58000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 63.58000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 63.58000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 63.58000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 63.58000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 63.58000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 63.58000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 63.58000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 63.58000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 63.58000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 63.58000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 63.58000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 63.58000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 63.58000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 63.58000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 63.58000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 63.58000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 63.58000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 63.58000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 63.58000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 63.58000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 63.58000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 63.58000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 127.16000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 190.74000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 668 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 749 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 38 REMARK 465 SER A 39 REMARK 465 PRO A 40 REMARK 465 MET A 41 REMARK 465 GLU A 42 REMARK 465 SER A 43 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 SER A 46 REMARK 465 VAL A 47 REMARK 465 LEU A 48 REMARK 465 LYS A 49 REMARK 465 MET A 50 REMARK 465 LYS A 51 REMARK 465 ASN A 52 REMARK 465 PHE A 53 REMARK 465 PHE A 54 REMARK 465 SER A 55 REMARK 465 THR A 56 REMARK 465 LYS A 57 REMARK 465 THR A 58 REMARK 465 ASP A 59 REMARK 465 TYR A 60 REMARK 465 PHE A 61 REMARK 465 ASN A 62 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 251 -1.81 68.81 REMARK 500 THR A 254 -167.41 -108.33 REMARK 500 THR A 254 -164.64 -108.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8D0O RELATED DB: PDB REMARK 900 HEAVY ATOM DERIVATIVE REMARK 900 RELATED ID: 8D0P RELATED DB: PDB REMARK 900 UNLIGANDED PROTEIN REMARK 900 RELATED ID: 8D0Q RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH GDP-CF3-FUCOSE AND H-TYPE 2 REMARK 900 RELATED ID: 8D0R RELATED DB: PDB REMARK 900 SAME PROTEIN COMPLEXED WITH GDP AND H-TYPE 2 DBREF 8D0S A 39 359 UNP Q9Y231 FUT9_HUMAN 39 359 SEQADV 8D0S GLY A 38 UNP Q9Y231 EXPRESSION TAG SEQADV 8D0S ALA A 237 UNP Q9Y231 THR 237 VARIANT SEQRES 1 A 322 GLY SER PRO MET GLU SER ALA SER SER VAL LEU LYS MET SEQRES 2 A 322 LYS ASN PHE PHE SER THR LYS THR ASP TYR PHE ASN GLU SEQRES 3 A 322 THR THR ILE LEU VAL TRP VAL TRP PRO PHE GLY GLN THR SEQRES 4 A 322 PHE ASP LEU THR SER CYS GLN ALA MET PHE ASN ILE GLN SEQRES 5 A 322 GLY CYS HIS LEU THR THR ASP ARG SER LEU TYR ASN LYS SEQRES 6 A 322 SER HIS ALA VAL LEU ILE HIS HIS ARG ASP ILE SER TRP SEQRES 7 A 322 ASP LEU THR ASN LEU PRO GLN GLN ALA ARG PRO PRO PHE SEQRES 8 A 322 GLN LYS TRP ILE TRP MET ASN LEU GLU SER PRO THR HIS SEQRES 9 A 322 THR PRO GLN LYS SER GLY ILE GLU HIS LEU PHE ASN LEU SEQRES 10 A 322 THR LEU THR TYR ARG ARG ASP SER ASP ILE GLN VAL PRO SEQRES 11 A 322 TYR GLY PHE LEU THR VAL SER THR ASN PRO PHE VAL PHE SEQRES 12 A 322 GLU VAL PRO SER LYS GLU LYS LEU VAL CYS TRP VAL VAL SEQRES 13 A 322 SER ASN TRP ASN PRO GLU HIS ALA ARG VAL LYS TYR TYR SEQRES 14 A 322 ASN GLU LEU SER LYS SER ILE GLU ILE HIS THR TYR GLY SEQRES 15 A 322 GLN ALA PHE GLY GLU TYR VAL ASN ASP LYS ASN LEU ILE SEQRES 16 A 322 PRO THR ILE SER ALA CYS LYS PHE TYR LEU SER PHE GLU SEQRES 17 A 322 ASN SER ILE HIS LYS ASP TYR ILE THR GLU LYS LEU TYR SEQRES 18 A 322 ASN ALA PHE LEU ALA GLY SER VAL PRO VAL VAL LEU GLY SEQRES 19 A 322 PRO SER ARG GLU ASN TYR GLU ASN TYR ILE PRO ALA ASP SEQRES 20 A 322 SER PHE ILE HIS VAL GLU ASP TYR ASN SER PRO SER GLU SEQRES 21 A 322 LEU ALA LYS TYR LEU LYS GLU VAL ASP LYS ASN ASN LYS SEQRES 22 A 322 LEU TYR LEU SER TYR PHE ASN TRP ARG LYS ASP PHE THR SEQRES 23 A 322 VAL ASN LEU PRO ARG PHE TRP GLU SER HIS ALA CYS LEU SEQRES 24 A 322 ALA CYS ASP HIS VAL LYS ARG HIS GLN GLU TYR LYS SER SEQRES 25 A 322 VAL GLY ASN LEU GLU LYS TRP PHE TRP ASN HET NAG B 1 14 HET NAG B 2 16 HET BMA B 3 11 HET MAN B 4 11 HET GAL C 1 12 HET NAG C 2 14 HET GAL C 3 11 HET GDP A 401 28 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN C6 H12 O6 FORMUL 3 GAL 2(C6 H12 O6) FORMUL 4 GDP C10 H15 N5 O11 P2 FORMUL 5 SO4 4(O4 S 2-) FORMUL 9 EDO 3(C2 H6 O2) FORMUL 12 HOH *321(H2 O) HELIX 1 AA1 TRP A 71 GLN A 75 5 5 HELIX 2 AA2 SER A 81 ASN A 87 1 7 HELIX 3 AA3 ASP A 96 SER A 103 5 8 HELIX 4 AA4 ARG A 111 ILE A 113 5 3 HELIX 5 AA5 SER A 138 THR A 142 5 5 HELIX 6 AA6 HIS A 200 SER A 210 1 11 HELIX 7 AA7 GLY A 219 GLY A 223 5 5 HELIX 8 AA8 ASN A 227 LYS A 229 5 3 HELIX 9 AA9 ASN A 230 ALA A 237 1 8 HELIX 10 AB1 THR A 254 GLY A 264 1 11 HELIX 11 AB2 SER A 273 GLU A 278 1 6 HELIX 12 AB3 PRO A 282 PHE A 286 5 5 HELIX 13 AB4 GLU A 290 TYR A 292 5 3 HELIX 14 AB5 SER A 294 LYS A 307 1 14 HELIX 15 AB6 ASN A 308 TYR A 315 1 8 HELIX 16 AB7 PHE A 316 LYS A 320 5 5 HELIX 17 AB8 TRP A 330 HIS A 344 1 15 HELIX 18 AB9 ASN A 352 ASN A 359 1 8 SHEET 1 AA1 6 CYS A 91 THR A 94 0 SHEET 2 AA1 6 THR A 64 VAL A 68 1 N VAL A 68 O THR A 94 SHEET 3 AA1 6 ALA A 105 HIS A 109 1 O LEU A 107 N LEU A 67 SHEET 4 AA1 6 LYS A 130 MET A 134 1 O ILE A 132 N VAL A 106 SHEET 5 AA1 6 LEU A 154 THR A 157 1 O LEU A 154 N TRP A 133 SHEET 6 AA1 6 ILE A 164 GLN A 165 1 O ILE A 164 N THR A 155 SHEET 1 AA2 2 PHE A 170 VAL A 173 0 SHEET 2 AA2 2 PHE A 322 ASN A 325 -1 O ASN A 325 N PHE A 170 SHEET 1 AA3 5 HIS A 216 TYR A 218 0 SHEET 2 AA3 5 LYS A 187 VAL A 192 1 N VAL A 189 O HIS A 216 SHEET 3 AA3 5 CYS A 238 PHE A 244 1 O LEU A 242 N CYS A 190 SHEET 4 AA3 5 VAL A 266 LEU A 270 1 O VAL A 268 N TYR A 241 SHEET 5 AA3 5 ILE A 287 HIS A 288 1 O ILE A 287 N VAL A 269 SSBOND 1 CYS A 82 CYS A 335 1555 1555 2.05 SSBOND 2 CYS A 91 CYS A 338 1555 1555 2.04 SSBOND 3 CYS A 190 CYS A 238 1555 1555 2.02 LINK ND2 ASN A 153 C1 NAG B 1 1555 1555 1.42 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.44 LINK O3 BMA B 3 C1 MAN B 4 1555 1555 1.44 LINK O3 GAL C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 GAL C 3 1555 1555 1.44 CISPEP 1 PHE A 329 TRP A 330 0 14.27 CRYST1 127.160 127.160 127.160 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007864 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007864 0.00000