data_8D2A # _entry.id 8D2A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8D2A pdb_00008d2a 10.2210/pdb8d2a/pdb WWPDB D_1000265893 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8D2A _pdbx_database_status.recvd_initial_deposition_date 2022-05-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Menichelli, E.' 1 ? 'Spraggon, G.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 119 _citation.language ? _citation.page_first e2213117119 _citation.page_last e2213117119 _citation.title 'Discovery of small molecules that target a tertiary-structured RNA.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2213117119 _citation.pdbx_database_id_PubMed 36413497 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Menichelli, E.' 1 ? primary 'Lam, B.J.' 2 0000-0001-6592-2098 primary 'Wang, Y.' 3 ? primary 'Wang, V.S.' 4 ? primary 'Shaffer, J.' 5 ? primary 'Tjhung, K.F.' 6 ? primary 'Bursulaya, B.' 7 ? primary 'Nguyen, T.N.' 8 ? primary 'Vo, T.' 9 ? primary 'Alper, P.B.' 10 ? primary 'McAllister, C.S.' 11 0000-0003-3483-4444 primary 'Jones, D.H.' 12 ? primary 'Spraggon, G.' 13 ? primary 'Michellys, P.Y.' 14 0000-0002-8660-9292 primary 'Joslin, J.' 15 0000-0002-6842-688X primary 'Joyce, G.F.' 16 0000-0003-0603-2874 primary 'Rogers, J.' 17 0000-0002-5364-2790 # _cell.angle_alpha 95.390 _cell.angle_alpha_esd ? _cell.angle_beta 89.990 _cell.angle_beta_esd ? _cell.angle_gamma 109.010 _cell.angle_gamma_esd ? _cell.entry_id 8D2A _cell.details ? _cell.formula_units_Z ? _cell.length_a 23.075 _cell.length_a_esd ? _cell.length_b 29.662 _cell.length_b_esd ? _cell.length_c 80.291 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8D2A _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (33-MER)' 10637.426 2 ? ? ? ? 2 non-polymer syn '6-methoxy-7-[(1-methylpiperidin-4-yl)methoxy]quinazolin-4-ol' 303.356 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 124 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCGAUACCAGCCGAAAGGCCCUUGGCAGCGCC _entity_poly.pdbx_seq_one_letter_code_can GGCGAUACCAGCCGAAAGGCCCUUGGCAGCGCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 G n 1 5 A n 1 6 U n 1 7 A n 1 8 C n 1 9 C n 1 10 A n 1 11 G n 1 12 C n 1 13 C n 1 14 G n 1 15 A n 1 16 A n 1 17 A n 1 18 G n 1 19 G n 1 20 C n 1 21 C n 1 22 C n 1 23 U n 1 24 U n 1 25 G n 1 26 G n 1 27 C n 1 28 A n 1 29 G n 1 30 C n 1 31 G n 1 32 C n 1 33 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 33 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8D2A _struct_ref.pdbx_db_accession 8D2A _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8D2A A 1 ? 33 ? 8D2A 1 ? 33 ? 1 33 2 1 8D2A B 1 ? 33 ? 8D2A 1 ? 33 ? 1 33 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 QB3 non-polymer . '6-methoxy-7-[(1-methylpiperidin-4-yl)methoxy]quinazolin-4-ol' ? 'C16 H21 N3 O3' 303.356 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8D2A _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 49.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium cacodylate, PEG 8000, 2-methyl-2,4-pentanediol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-01-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97648 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97648 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.3 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8D2A _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.17 _reflns.d_resolution_low 27.91 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9761 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 91.52 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.78 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.17 _reflns_shell.d_res_low 2.248 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 911 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.731 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 90.520 _refine.B_iso_mean 39.6722 _refine.B_iso_min 13.740 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8D2A _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1700 _refine.ls_d_res_low 27.9100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9730 _refine.ls_number_reflns_R_free 514 _refine.ls_number_reflns_R_work 9216 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 91.5100 _refine.ls_percent_reflns_R_free 5.2800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1902 _refine.ls_R_factor_R_free 0.2519 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1871 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.980 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1O15 _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.2400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.1700 _refine_hist.d_res_low 27.9100 _refine_hist.number_atoms_solvent 124 _refine_hist.number_atoms_total 1624 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 66 _refine_hist.pdbx_B_iso_mean_ligand 39.31 _refine_hist.pdbx_B_iso_mean_solvent 29.02 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1408 _refine_hist.pdbx_number_atoms_ligand 92 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.1700 2.3900 2384 . 149 2235 89.0000 . . . 0.2985 0.0000 0.2489 . . . . . . . 4 . . . 'X-RAY DIFFRACTION' 2.3900 2.7300 2479 . 139 2340 94.0000 . . . 0.3093 0.0000 0.2364 . . . . . . . 4 . . . 'X-RAY DIFFRACTION' 2.7300 3.4400 2422 . 124 2298 91.0000 . . . 0.2849 0.0000 0.2041 . . . . . . . 4 . . . 'X-RAY DIFFRACTION' 3.4400 27.9100 2445 . 102 2343 92.0000 . . . 0.1862 0.0000 0.1455 . . . . . . . 4 . . . # _struct.entry_id 8D2A _struct.title 'Crystal structure of theophylline aptamer in complex with TAL3' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8D2A _struct_keywords.text 'RNA, aptamer, theophylline' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 3 ? K N N 5 ? L N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A U 6 O4 ? ? ? 1_555 D NA . NA ? ? A U 6 A NA 102 1_555 ? ? ? ? ? ? ? 2.448 ? ? metalc2 metalc ? ? A C 22 "O2'" ? ? ? 1_555 D NA . NA ? ? A C 22 A NA 102 1_555 ? ? ? ? ? ? ? 2.504 ? ? metalc3 metalc ? ? A U 23 "O2'" ? ? ? 1_555 F NA . NA ? ? A U 23 A NA 104 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc4 metalc ? ? A U 23 O2 ? ? ? 1_555 F NA . NA ? ? A U 23 A NA 104 1_555 ? ? ? ? ? ? ? 2.589 ? ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 102 A HOH 214 1_555 ? ? ? ? ? ? ? 2.531 ? ? metalc6 metalc ? ? D NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 102 A HOH 230 1_555 ? ? ? ? ? ? ? 2.602 ? ? metalc7 metalc ? ? D NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 102 A HOH 256 1_555 ? ? ? ? ? ? ? 2.771 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 103 A HOH 209 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 103 A HOH 235 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 103 A HOH 236 1_555 ? ? ? ? ? ? ? 2.308 ? ? metalc11 metalc ? ? F NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 104 A HOH 217 1_555 ? ? ? ? ? ? ? 2.797 ? ? metalc12 metalc ? ? F NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 104 A HOH 218 1_555 ? ? ? ? ? ? ? 2.468 ? ? metalc13 metalc ? ? F NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 104 A HOH 238 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc14 metalc ? ? F NA . NA ? ? ? 1_555 K HOH . O ? ? A NA 104 A HOH 259 1_555 ? ? ? ? ? ? ? 2.527 ? ? metalc15 metalc ? ? B U 6 O4 ? ? ? 1_555 J NA . NA ? ? B U 6 B NA 104 1_555 ? ? ? ? ? ? ? 2.319 ? ? metalc16 metalc ? ? B C 22 "O2'" ? ? ? 1_555 J NA . NA ? ? B C 22 B NA 104 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc17 metalc ? ? B U 23 "O2'" ? ? ? 1_555 H NA . NA ? ? B U 23 B NA 102 1_555 ? ? ? ? ? ? ? 2.386 ? ? metalc18 metalc ? ? B U 23 O2 ? ? ? 1_555 H NA . NA ? ? B U 23 B NA 102 1_555 ? ? ? ? ? ? ? 2.989 ? ? metalc19 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 102 B HOH 226 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc20 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 102 B HOH 229 1_555 ? ? ? ? ? ? ? 2.653 ? ? metalc21 metalc ? ? H NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 102 B HOH 241 1_555 ? ? ? ? ? ? ? 2.258 ? ? metalc22 metalc ? ? I MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 103 B HOH 219 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc23 metalc ? ? I MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 103 B HOH 230 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc24 metalc ? ? I MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 103 B HOH 250 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc25 metalc ? ? I MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 103 B HOH 253 1_555 ? ? ? ? ? ? ? 2.029 ? ? metalc26 metalc ? ? I MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 103 B HOH 254 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc27 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 104 B HOH 247 1_555 ? ? ? ? ? ? ? 2.591 ? ? metalc28 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 104 B HOH 252 1_555 ? ? ? ? ? ? ? 2.476 ? ? metalc29 metalc ? ? J NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 104 B HOH 258 1_555 ? ? ? ? ? ? ? 2.553 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 33 N3 ? ? A G 1 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 33 O2 ? ? A G 1 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 33 N4 ? ? A G 1 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 2 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 2 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 2 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 3 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 3 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 3 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 4 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 4 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 4 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N1 ? ? ? 1_555 A G 29 N1 ? ? A A 5 A G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A A 5 N6 ? ? ? 1_555 A G 29 O6 ? ? A A 5 A G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog15 hydrog ? ? A U 6 N3 ? ? ? 1_555 A U 23 O4 ? ? A U 6 A U 23 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog16 hydrog ? ? A U 6 O2 ? ? ? 1_555 A A 28 N6 ? ? A U 6 A A 28 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog17 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 8 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 8 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 8 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 9 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 9 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 9 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 10 N6 ? ? ? 1_555 A C 21 O2 ? ? A A 10 A C 21 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 20 N3 ? ? A G 11 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 20 O2 ? ? A G 11 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 20 N4 ? ? A G 11 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 19 N1 ? ? A C 12 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 19 O6 ? ? A C 12 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 19 N2 ? ? A C 12 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 18 N1 ? ? A C 13 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 18 O6 ? ? A C 13 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 18 N2 ? ? A C 13 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 N2 ? ? ? 1_555 A A 17 N7 ? ? A G 14 A A 17 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog34 hydrog ? ? A U 23 N3 ? ? ? 1_555 A A 28 N7 ? ? A U 23 A A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog35 hydrog ? ? A U 23 O4 ? ? ? 1_555 A A 28 N6 ? ? A U 23 A A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog36 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 33 N3 ? ? B G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 33 O2 ? ? B G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 33 N4 ? ? B G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 32 N3 ? ? B G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 32 O2 ? ? B G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 32 N4 ? ? B G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 31 N1 ? ? B C 3 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 31 O6 ? ? B C 3 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 31 N2 ? ? B C 3 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 30 N3 ? ? B G 4 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 30 O2 ? ? B G 4 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 30 N4 ? ? B G 4 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B A 5 N1 ? ? ? 1_555 B G 29 N1 ? ? B A 5 B G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog49 hydrog ? ? B A 5 N6 ? ? ? 1_555 B G 29 O6 ? ? B A 5 B G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog50 hydrog ? ? B U 6 N3 ? ? ? 1_555 B U 23 O4 ? ? B U 6 B U 23 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog51 hydrog ? ? B U 6 O2 ? ? ? 1_555 B A 28 N6 ? ? B U 6 B A 28 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog52 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 8 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 8 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 8 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 9 N3 ? ? ? 1_555 B G 25 N1 ? ? B C 9 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 25 O6 ? ? B C 9 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 25 N2 ? ? B C 9 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B A 10 N6 ? ? ? 1_555 B C 21 O2 ? ? B A 10 B C 21 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog59 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 20 N3 ? ? B G 11 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 20 O2 ? ? B G 11 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 20 N4 ? ? B G 11 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 19 N1 ? ? B C 12 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 19 O6 ? ? B C 12 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 19 N2 ? ? B C 12 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 18 N1 ? ? B C 13 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 18 O6 ? ? B C 13 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 18 N2 ? ? B C 13 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 14 N2 ? ? ? 1_555 B A 17 N7 ? ? B G 14 B A 17 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog69 hydrog ? ? B U 23 N3 ? ? ? 1_555 B A 28 N7 ? ? B U 23 B A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog70 hydrog ? ? B U 23 O4 ? ? ? 1_555 B A 28 N6 ? ? B U 23 B A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _atom_sites.entry_id 8D2A _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.043337 _atom_sites.fract_transf_matrix[1][2] 0.014931 _atom_sites.fract_transf_matrix[1][3] 0.001482 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035658 _atom_sites.fract_transf_matrix[2][3] 0.003558 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012517 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MG N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 G 4 4 4 G G A . n A 1 5 A 5 5 5 A A A . n A 1 6 U 6 6 6 U U A . n A 1 7 A 7 7 7 A A A . n A 1 8 C 8 8 8 C C A . n A 1 9 C 9 9 9 C C A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 C 12 12 12 C C A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 A 15 15 15 A A A . n A 1 16 A 16 16 16 A A A . n A 1 17 A 17 17 17 A A A . n A 1 18 G 18 18 18 G G A . n A 1 19 G 19 19 19 G G A . n A 1 20 C 20 20 20 C C A . n A 1 21 C 21 21 21 C C A . n A 1 22 C 22 22 22 C C A . n A 1 23 U 23 23 23 U U A . n A 1 24 U 24 24 24 U U A . n A 1 25 G 25 25 25 G G A . n A 1 26 G 26 26 26 G G A . n A 1 27 C 27 27 27 C C A . n A 1 28 A 28 28 28 A A A . n A 1 29 G 29 29 29 G G A . n A 1 30 C 30 30 30 C C A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 C 33 33 33 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 C 3 3 3 C C B . n B 1 4 G 4 4 4 G G B . n B 1 5 A 5 5 5 A A B . n B 1 6 U 6 6 6 U U B . n B 1 7 A 7 7 7 A A B . n B 1 8 C 8 8 8 C C B . n B 1 9 C 9 9 9 C C B . n B 1 10 A 10 10 10 A A B . n B 1 11 G 11 11 11 G G B . n B 1 12 C 12 12 12 C C B . n B 1 13 C 13 13 13 C C B . n B 1 14 G 14 14 14 G G B . n B 1 15 A 15 15 15 A A B . n B 1 16 A 16 16 16 A A B . n B 1 17 A 17 17 17 A A B . n B 1 18 G 18 18 18 G G B . n B 1 19 G 19 19 19 G G B . n B 1 20 C 20 20 20 C C B . n B 1 21 C 21 21 21 C C B . n B 1 22 C 22 22 22 C C B . n B 1 23 U 23 23 23 U U B . n B 1 24 U 24 24 24 U U B . n B 1 25 G 25 25 25 G G B . n B 1 26 G 26 26 26 G G B . n B 1 27 C 27 27 27 C C B . n B 1 28 A 28 28 28 A A B . n B 1 29 G 29 29 29 G G B . n B 1 30 C 30 30 30 C C B . n B 1 31 G 31 31 31 G G B . n B 1 32 C 32 32 32 C C B . n B 1 33 C 33 33 33 C C B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email glen.spraggon@novartis.com _pdbx_contact_author.name_first Glen _pdbx_contact_author.name_last Spraggon _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7880-8454 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QB3 1 101 34 QB3 LIG A . D 3 NA 1 102 1 NA NA A . E 4 MG 1 103 2 MG MG A . F 3 NA 1 104 6 NA NA A . G 2 QB3 1 101 34 QB3 LIG B . H 3 NA 1 102 3 NA NA B . I 4 MG 1 103 4 MG MG B . J 3 NA 1 104 5 NA NA B . K 5 HOH 1 201 63 HOH HOH A . K 5 HOH 2 202 66 HOH HOH A . K 5 HOH 3 203 43 HOH HOH A . K 5 HOH 4 204 55 HOH HOH A . K 5 HOH 5 205 38 HOH HOH A . K 5 HOH 6 206 20 HOH HOH A . K 5 HOH 7 207 85 HOH HOH A . K 5 HOH 8 208 76 HOH HOH A . K 5 HOH 9 209 83 HOH HOH A . K 5 HOH 10 210 12 HOH HOH A . K 5 HOH 11 211 64 HOH HOH A . K 5 HOH 12 212 32 HOH HOH A . K 5 HOH 13 213 116 HOH HOH A . K 5 HOH 14 214 98 HOH HOH A . K 5 HOH 15 215 73 HOH HOH A . K 5 HOH 16 216 30 HOH HOH A . K 5 HOH 17 217 4 HOH HOH A . K 5 HOH 18 218 3 HOH HOH A . K 5 HOH 19 219 45 HOH HOH A . K 5 HOH 20 220 121 HOH HOH A . K 5 HOH 21 221 33 HOH HOH A . K 5 HOH 22 222 108 HOH HOH A . K 5 HOH 23 223 34 HOH HOH A . K 5 HOH 24 224 51 HOH HOH A . K 5 HOH 25 225 119 HOH HOH A . K 5 HOH 26 226 115 HOH HOH A . K 5 HOH 27 227 52 HOH HOH A . K 5 HOH 28 228 58 HOH HOH A . K 5 HOH 29 229 80 HOH HOH A . K 5 HOH 30 230 6 HOH HOH A . K 5 HOH 31 231 91 HOH HOH A . K 5 HOH 32 232 41 HOH HOH A . K 5 HOH 33 233 1 HOH HOH A . K 5 HOH 34 234 101 HOH HOH A . K 5 HOH 35 235 81 HOH HOH A . K 5 HOH 36 236 82 HOH HOH A . K 5 HOH 37 237 72 HOH HOH A . K 5 HOH 38 238 22 HOH HOH A . K 5 HOH 39 239 5 HOH HOH A . K 5 HOH 40 240 71 HOH HOH A . K 5 HOH 41 241 37 HOH HOH A . K 5 HOH 42 242 56 HOH HOH A . K 5 HOH 43 243 102 HOH HOH A . K 5 HOH 44 244 31 HOH HOH A . K 5 HOH 45 245 135 HOH HOH A . K 5 HOH 46 246 90 HOH HOH A . K 5 HOH 47 247 35 HOH HOH A . K 5 HOH 48 248 114 HOH HOH A . K 5 HOH 49 249 54 HOH HOH A . K 5 HOH 50 250 16 HOH HOH A . K 5 HOH 51 251 109 HOH HOH A . K 5 HOH 52 252 128 HOH HOH A . K 5 HOH 53 253 113 HOH HOH A . K 5 HOH 54 254 68 HOH HOH A . K 5 HOH 55 255 40 HOH HOH A . K 5 HOH 56 256 79 HOH HOH A . K 5 HOH 57 257 110 HOH HOH A . K 5 HOH 58 258 92 HOH HOH A . K 5 HOH 59 259 7 HOH HOH A . K 5 HOH 60 260 99 HOH HOH A . K 5 HOH 61 261 88 HOH HOH A . K 5 HOH 62 262 49 HOH HOH A . L 5 HOH 1 201 136 HOH HOH B . L 5 HOH 2 202 42 HOH HOH B . L 5 HOH 3 203 78 HOH HOH B . L 5 HOH 4 204 96 HOH HOH B . L 5 HOH 5 205 94 HOH HOH B . L 5 HOH 6 206 53 HOH HOH B . L 5 HOH 7 207 124 HOH HOH B . L 5 HOH 8 208 117 HOH HOH B . L 5 HOH 9 209 97 HOH HOH B . L 5 HOH 10 210 29 HOH HOH B . L 5 HOH 11 211 111 HOH HOH B . L 5 HOH 12 212 60 HOH HOH B . L 5 HOH 13 213 74 HOH HOH B . L 5 HOH 14 214 14 HOH HOH B . L 5 HOH 15 215 48 HOH HOH B . L 5 HOH 16 216 8 HOH HOH B . L 5 HOH 17 217 2 HOH HOH B . L 5 HOH 18 218 61 HOH HOH B . L 5 HOH 19 219 129 HOH HOH B . L 5 HOH 20 220 59 HOH HOH B . L 5 HOH 21 221 75 HOH HOH B . L 5 HOH 22 222 62 HOH HOH B . L 5 HOH 23 223 10 HOH HOH B . L 5 HOH 24 224 19 HOH HOH B . L 5 HOH 25 225 44 HOH HOH B . L 5 HOH 26 226 27 HOH HOH B . L 5 HOH 27 227 24 HOH HOH B . L 5 HOH 28 228 46 HOH HOH B . L 5 HOH 29 229 28 HOH HOH B . L 5 HOH 30 230 9 HOH HOH B . L 5 HOH 31 231 130 HOH HOH B . L 5 HOH 32 232 57 HOH HOH B . L 5 HOH 33 233 25 HOH HOH B . L 5 HOH 34 234 13 HOH HOH B . L 5 HOH 35 235 21 HOH HOH B . L 5 HOH 36 236 70 HOH HOH B . L 5 HOH 37 237 69 HOH HOH B . L 5 HOH 38 238 87 HOH HOH B . L 5 HOH 39 239 18 HOH HOH B . L 5 HOH 40 240 132 HOH HOH B . L 5 HOH 41 241 84 HOH HOH B . L 5 HOH 42 242 131 HOH HOH B . L 5 HOH 43 243 39 HOH HOH B . L 5 HOH 44 244 50 HOH HOH B . L 5 HOH 45 245 17 HOH HOH B . L 5 HOH 46 246 65 HOH HOH B . L 5 HOH 47 247 36 HOH HOH B . L 5 HOH 48 248 95 HOH HOH B . L 5 HOH 49 249 105 HOH HOH B . L 5 HOH 50 250 86 HOH HOH B . L 5 HOH 51 251 77 HOH HOH B . L 5 HOH 52 252 15 HOH HOH B . L 5 HOH 53 253 133 HOH HOH B . L 5 HOH 54 254 134 HOH HOH B . L 5 HOH 55 255 67 HOH HOH B . L 5 HOH 56 256 47 HOH HOH B . L 5 HOH 57 257 125 HOH HOH B . L 5 HOH 58 258 11 HOH HOH B . L 5 HOH 59 259 100 HOH HOH B . L 5 HOH 60 260 106 HOH HOH B . L 5 HOH 61 261 123 HOH HOH B . L 5 HOH 62 262 104 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,K 2 1 B,G,H,I,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O4 ? A U 6 ? A U 6 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 "O2'" ? A C 22 ? A C 22 ? 1_555 90.2 ? 2 O4 ? A U 6 ? A U 6 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 214 ? 1_555 174.1 ? 3 "O2'" ? A C 22 ? A C 22 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 214 ? 1_555 92.5 ? 4 O4 ? A U 6 ? A U 6 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 230 ? 1_555 95.2 ? 5 "O2'" ? A C 22 ? A C 22 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 230 ? 1_555 95.8 ? 6 O ? K HOH . ? A HOH 214 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 230 ? 1_555 79.4 ? 7 O4 ? A U 6 ? A U 6 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 256 ? 1_555 101.3 ? 8 "O2'" ? A C 22 ? A C 22 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 256 ? 1_555 88.6 ? 9 O ? K HOH . ? A HOH 214 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 256 ? 1_555 83.9 ? 10 O ? K HOH . ? A HOH 230 ? 1_555 NA ? D NA . ? A NA 102 ? 1_555 O ? K HOH . ? A HOH 256 ? 1_555 162.9 ? 11 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O2 ? A U 23 ? A U 23 ? 1_555 93.8 ? 12 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 217 ? 1_555 156.6 ? 13 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 217 ? 1_555 90.3 ? 14 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 78.3 ? 15 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 81.4 ? 16 O ? K HOH . ? A HOH 217 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 79.5 ? 17 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 238 ? 1_555 100.0 ? 18 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 238 ? 1_555 76.4 ? 19 O ? K HOH . ? A HOH 217 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 238 ? 1_555 103.3 ? 20 O ? K HOH . ? A HOH 218 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 238 ? 1_555 157.6 ? 21 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 259 ? 1_555 85.2 ? 22 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 259 ? 1_555 173.5 ? 23 O ? K HOH . ? A HOH 217 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 259 ? 1_555 93.1 ? 24 O ? K HOH . ? A HOH 218 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 259 ? 1_555 104.7 ? 25 O ? K HOH . ? A HOH 238 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? K HOH . ? A HOH 259 ? 1_555 97.4 ? 26 O ? K HOH . ? A HOH 209 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? K HOH . ? A HOH 235 ? 1_555 84.9 ? 27 O ? K HOH . ? A HOH 209 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? K HOH . ? A HOH 236 ? 1_555 77.4 ? 28 O ? K HOH . ? A HOH 235 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? K HOH . ? A HOH 236 ? 1_555 70.7 ? 29 O4 ? B U 6 ? B U 6 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 "O2'" ? B C 22 ? B C 22 ? 1_555 92.7 ? 30 O4 ? B U 6 ? B U 6 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 247 ? 1_555 102.8 ? 31 "O2'" ? B C 22 ? B C 22 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 247 ? 1_555 85.4 ? 32 O4 ? B U 6 ? B U 6 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 252 ? 1_555 93.1 ? 33 "O2'" ? B C 22 ? B C 22 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 252 ? 1_555 92.0 ? 34 O ? L HOH . ? B HOH 247 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 252 ? 1_555 163.9 ? 35 O4 ? B U 6 ? B U 6 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 258 ? 1_555 168.5 ? 36 "O2'" ? B C 22 ? B C 22 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 258 ? 1_555 92.0 ? 37 O ? L HOH . ? B HOH 247 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 258 ? 1_555 88.0 ? 38 O ? L HOH . ? B HOH 252 ? 1_555 NA ? J NA . ? B NA 104 ? 1_555 O ? L HOH . ? B HOH 258 ? 1_555 76.2 ? 39 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O2 ? B U 23 ? B U 23 ? 1_555 85.2 ? 40 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 226 ? 1_555 97.8 ? 41 O2 ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 226 ? 1_555 75.3 ? 42 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 229 ? 1_555 70.3 ? 43 O2 ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 229 ? 1_555 76.1 ? 44 O ? L HOH . ? B HOH 226 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 229 ? 1_555 149.8 ? 45 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 241 ? 1_555 156.3 ? 46 O2 ? B U 23 ? B U 23 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 241 ? 1_555 83.4 ? 47 O ? L HOH . ? B HOH 226 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 241 ? 1_555 99.3 ? 48 O ? L HOH . ? B HOH 229 ? 1_555 NA ? H NA . ? B NA 102 ? 1_555 O ? L HOH . ? B HOH 241 ? 1_555 86.8 ? 49 O ? L HOH . ? B HOH 219 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 230 ? 1_555 85.8 ? 50 O ? L HOH . ? B HOH 219 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 250 ? 1_555 168.6 ? 51 O ? L HOH . ? B HOH 230 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 250 ? 1_555 87.1 ? 52 O ? L HOH . ? B HOH 219 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 253 ? 1_555 96.8 ? 53 O ? L HOH . ? B HOH 230 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 253 ? 1_555 83.5 ? 54 O ? L HOH . ? B HOH 250 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 253 ? 1_555 91.2 ? 55 O ? L HOH . ? B HOH 219 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 254 ? 1_555 77.7 ? 56 O ? L HOH . ? B HOH 230 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 254 ? 1_555 92.9 ? 57 O ? L HOH . ? B HOH 250 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 254 ? 1_555 93.8 ? 58 O ? L HOH . ? B HOH 253 ? 1_555 MG ? I MG . ? B MG 103 ? 1_555 O ? L HOH . ? B HOH 254 ? 1_555 173.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-11-30 2 'Structure model' 1 1 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 12.7441 -6.4120 -10.1763 0.2184 ? -0.0070 ? 0.0125 ? 0.1847 ? -0.0152 ? 0.2178 ? 0.0300 ? -0.0205 ? -0.0068 ? 0.0572 ? -0.0472 ? 0.0454 ? 0.0582 ? 0.0952 ? -0.0501 ? -0.1729 ? 0.0142 ? -0.1838 ? 0.0658 ? 0.0294 ? 0.0001 ? 2 'X-RAY DIFFRACTION' ? refined 12.7897 -14.6796 -29.3240 1.1833 ? 0.2307 ? 0.0037 ? 0.4893 ? -0.0159 ? 0.2057 ? 0.2050 ? -0.0828 ? 0.1291 ? 0.2327 ? 0.0403 ? 0.1245 ? -0.0625 ? 0.1311 ? 0.0203 ? 0.0513 ? 0.0505 ? -0.0525 ? 0.1316 ? -0.1390 ? -0.0793 ? 3 'X-RAY DIFFRACTION' ? refined 9.8077 -3.2030 -8.4239 0.1465 ? -0.0184 ? 0.0414 ? 0.2283 ? 0.0267 ? 0.2638 ? 0.0731 ? -0.1092 ? -0.0134 ? 0.2894 ? 0.1971 ? 0.2188 ? 0.0527 ? 0.0094 ? 0.3158 ? 0.0176 ? -0.0493 ? -0.0700 ? 0.0084 ? 0.0130 ? 0.0137 ? 4 'X-RAY DIFFRACTION' ? refined 21.4782 -16.2814 8.2902 0.1968 ? -0.0085 ? -0.0113 ? 0.2436 ? -0.0053 ? 0.2854 ? 0.0085 ? -0.0042 ? 0.0044 ? 0.0045 ? -0.0022 ? 0.0016 ? -0.0081 ? 0.0490 ? -0.0108 ? -0.0635 ? 0.1269 ? -0.0503 ? 0.0115 ? -0.0381 ? 0.0000 ? 5 'X-RAY DIFFRACTION' ? refined 8.0265 -11.5230 28.9120 0.5288 ? 0.1105 ? -0.0106 ? 0.3997 ? -0.0377 ? 0.1833 ? 0.0310 ? 0.0138 ? -0.0129 ? 0.0307 ? 0.0238 ? 0.0403 ? -0.1812 ? -0.2159 ? 0.0053 ? 0.4583 ? 0.1438 ? -0.0226 ? -0.2438 ? -0.2256 ? -0.0079 ? 6 'X-RAY DIFFRACTION' ? refined 14.2790 -20.2477 12.2593 0.1929 ? -0.0469 ? -0.0487 ? 0.1840 ? 0.0001 ? 0.2535 ? 0.0589 ? 0.0507 ? -0.0096 ? 0.0591 ? 0.0290 ? 0.0583 ? -0.0005 ? 0.0213 ? -0.0855 ? -0.0532 ? -0.0388 ? -0.2210 ? 0.1061 ? -0.1304 ? -0.0018 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? ? A 10 ? ? ;chain 'A' and (resid 1 through 10 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 11 ? ? ? A 20 ? ? ;chain 'A' and (resid 11 through 20 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 21 ? ? ? A 33 ? ? ;chain 'A' and (resid 21 through 33 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? B 1 ? ? ? B 5 ? ? ;chain 'B' and (resid 1 through 5 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? B 6 ? ? ? B 20 ? ? ;chain 'B' and (resid 6 through 20 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? B 21 ? ? ? B 33 ? ? ;chain 'B' and (resid 21 through 33 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 8D2A _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OP2 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 G _pdbx_validate_close_contact.auth_seq_id_1 4 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 201 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.02 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 U _pdbx_validate_rmsd_angle.auth_seq_id_1 24 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 U _pdbx_validate_rmsd_angle.auth_seq_id_2 24 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 U _pdbx_validate_rmsd_angle.auth_seq_id_3 24 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 114.09 _pdbx_validate_rmsd_angle.angle_target_value 108.50 _pdbx_validate_rmsd_angle.angle_deviation 5.59 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 NA NA NA N N 115 QB3 C13 C N N 116 QB3 C15 C Y N 117 QB3 C17 C Y N 118 QB3 C21 C Y N 119 QB3 C22 C Y N 120 QB3 C01 C N N 121 QB3 C03 C Y N 122 QB3 C04 C Y N 123 QB3 C06 C N N 124 QB3 C07 C N N 125 QB3 C08 C N N 126 QB3 C09 C N N 127 QB3 C11 C N N 128 QB3 C12 C N N 129 QB3 C14 C Y N 130 QB3 C19 C Y N 131 QB3 N10 N N N 132 QB3 N16 N Y N 133 QB3 N18 N Y N 134 QB3 O02 O N N 135 QB3 O05 O N N 136 QB3 O20 O N N 137 QB3 H131 H N N 138 QB3 H132 H N N 139 QB3 H171 H N N 140 QB3 H221 H N N 141 QB3 H012 H N N 142 QB3 H011 H N N 143 QB3 H013 H N N 144 QB3 H061 H N N 145 QB3 H062 H N N 146 QB3 H071 H N N 147 QB3 H082 H N N 148 QB3 H081 H N N 149 QB3 H091 H N N 150 QB3 H092 H N N 151 QB3 H111 H N N 152 QB3 H112 H N N 153 QB3 H113 H N N 154 QB3 H122 H N N 155 QB3 H121 H N N 156 QB3 H141 H N N 157 QB3 H201 H N N 158 U OP3 O N N 159 U P P N N 160 U OP1 O N N 161 U OP2 O N N 162 U "O5'" O N N 163 U "C5'" C N N 164 U "C4'" C N R 165 U "O4'" O N N 166 U "C3'" C N S 167 U "O3'" O N N 168 U "C2'" C N R 169 U "O2'" O N N 170 U "C1'" C N R 171 U N1 N N N 172 U C2 C N N 173 U O2 O N N 174 U N3 N N N 175 U C4 C N N 176 U O4 O N N 177 U C5 C N N 178 U C6 C N N 179 U HOP3 H N N 180 U HOP2 H N N 181 U "H5'" H N N 182 U "H5''" H N N 183 U "H4'" H N N 184 U "H3'" H N N 185 U "HO3'" H N N 186 U "H2'" H N N 187 U "HO2'" H N N 188 U "H1'" H N N 189 U H3 H N N 190 U H5 H N N 191 U H6 H N N 192 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 QB3 C12 C13 sing N N 118 QB3 C12 N10 sing N N 119 QB3 N16 C17 doub Y N 120 QB3 N16 C15 sing Y N 121 QB3 C17 N18 sing Y N 122 QB3 C14 C15 sing Y N 123 QB3 C14 C04 doub Y N 124 QB3 C15 C21 doub Y N 125 QB3 O05 C04 sing N N 126 QB3 O05 C06 sing N N 127 QB3 C13 C07 sing N N 128 QB3 C07 C06 sing N N 129 QB3 C07 C08 sing N N 130 QB3 N18 C19 doub Y N 131 QB3 C04 C03 sing Y N 132 QB3 C21 C19 sing Y N 133 QB3 C21 C22 sing Y N 134 QB3 C19 O20 sing N N 135 QB3 C03 C22 doub Y N 136 QB3 C03 O02 sing N N 137 QB3 O02 C01 sing N N 138 QB3 C11 N10 sing N N 139 QB3 N10 C09 sing N N 140 QB3 C09 C08 sing N N 141 QB3 C13 H131 sing N N 142 QB3 C13 H132 sing N N 143 QB3 C17 H171 sing N N 144 QB3 C22 H221 sing N N 145 QB3 C01 H012 sing N N 146 QB3 C01 H011 sing N N 147 QB3 C01 H013 sing N N 148 QB3 C06 H061 sing N N 149 QB3 C06 H062 sing N N 150 QB3 C07 H071 sing N N 151 QB3 C08 H082 sing N N 152 QB3 C08 H081 sing N N 153 QB3 C09 H091 sing N N 154 QB3 C09 H092 sing N N 155 QB3 C11 H111 sing N N 156 QB3 C11 H112 sing N N 157 QB3 C11 H113 sing N N 158 QB3 C12 H122 sing N N 159 QB3 C12 H121 sing N N 160 QB3 C14 H141 sing N N 161 QB3 O20 H201 sing N N 162 U OP3 P sing N N 163 U OP3 HOP3 sing N N 164 U P OP1 doub N N 165 U P OP2 sing N N 166 U P "O5'" sing N N 167 U OP2 HOP2 sing N N 168 U "O5'" "C5'" sing N N 169 U "C5'" "C4'" sing N N 170 U "C5'" "H5'" sing N N 171 U "C5'" "H5''" sing N N 172 U "C4'" "O4'" sing N N 173 U "C4'" "C3'" sing N N 174 U "C4'" "H4'" sing N N 175 U "O4'" "C1'" sing N N 176 U "C3'" "O3'" sing N N 177 U "C3'" "C2'" sing N N 178 U "C3'" "H3'" sing N N 179 U "O3'" "HO3'" sing N N 180 U "C2'" "O2'" sing N N 181 U "C2'" "C1'" sing N N 182 U "C2'" "H2'" sing N N 183 U "O2'" "HO2'" sing N N 184 U "C1'" N1 sing N N 185 U "C1'" "H1'" sing N N 186 U N1 C2 sing N N 187 U N1 C6 sing N N 188 U C2 O2 doub N N 189 U C2 N3 sing N N 190 U N3 C4 sing N N 191 U N3 H3 sing N N 192 U C4 O4 doub N N 193 U C4 C5 sing N N 194 U C5 C6 doub N N 195 U C5 H5 sing N N 196 U C6 H6 sing N N 197 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8D2A 'double helix' 8D2A 'a-form double helix' 8D2A tetraloop 8D2A 'bulge loop' 8D2A 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 33 1_555 -0.251 -0.237 -0.044 -5.447 -5.355 0.289 1 A_G1:C33_A A 1 ? A 33 ? 19 1 1 A G 2 1_555 A C 32 1_555 -0.190 -0.332 -0.243 -6.766 -9.206 -1.528 2 A_G2:C32_A A 2 ? A 32 ? 19 1 1 A C 3 1_555 A G 31 1_555 0.259 -0.340 0.103 -5.472 -5.290 0.520 3 A_C3:G31_A A 3 ? A 31 ? 19 1 1 A G 4 1_555 A C 30 1_555 0.089 -0.016 0.189 -5.057 -15.876 0.537 4 A_G4:C30_A A 4 ? A 30 ? 19 1 1 A A 5 1_555 A G 29 1_555 0.051 1.541 -0.331 -6.058 -21.040 -11.290 5 A_A5:G29_A A 5 ? A 29 ? 8 1 1 A U 23 1_555 A A 28 1_555 -0.855 3.643 0.057 -3.236 -3.432 -70.999 6 A_U23:A28_A A 23 ? A 28 ? 23 3 1 A C 8 1_555 A G 26 1_555 0.263 -0.167 -0.096 2.907 2.017 -0.905 7 A_C8:G26_A A 8 ? A 26 ? 19 1 1 A C 9 1_555 A G 25 1_555 0.479 -0.361 0.451 5.194 -17.009 -0.108 8 A_C9:G25_A A 9 ? A 25 ? 19 1 1 A A 10 1_555 A C 21 1_555 -3.948 -0.683 1.242 13.496 -6.300 -13.455 9 A_A10:C21_A A 10 ? A 21 ? ? 1 1 A G 11 1_555 A C 20 1_555 -0.459 -0.276 0.081 12.051 -19.218 3.702 10 A_G11:C20_A A 11 ? A 20 ? 19 1 1 A C 12 1_555 A G 19 1_555 -0.441 0.148 -0.313 9.756 -17.566 4.546 11 A_C12:G19_A A 12 ? A 19 ? 19 1 1 A C 13 1_555 A G 18 1_555 0.643 -0.360 -0.205 3.084 -0.429 -3.555 12 A_C13:G18_A A 13 ? A 18 ? 19 1 1 A G 14 1_555 A A 17 1_555 6.954 -5.335 0.378 24.578 3.992 -17.007 13 A_G14:A17_A A 14 ? A 17 ? ? ? 1 B G 1 1_555 B C 33 1_555 -0.123 -0.007 0.203 -7.092 -11.342 -1.169 14 B_G1:C33_B B 1 ? B 33 ? 19 1 1 B G 2 1_555 B C 32 1_555 -0.226 -0.200 0.006 -5.906 -13.088 -0.657 15 B_G2:C32_B B 2 ? B 32 ? 19 1 1 B C 3 1_555 B G 31 1_555 0.134 -0.120 0.236 -7.123 -13.625 1.422 16 B_C3:G31_B B 3 ? B 31 ? 19 1 1 B G 4 1_555 B C 30 1_555 -0.210 -0.120 0.120 -8.302 -13.981 1.080 17 B_G4:C30_B B 4 ? B 30 ? 19 1 1 B A 5 1_555 B G 29 1_555 -0.099 1.259 -0.664 -3.847 -18.613 -10.025 18 B_A5:G29_B B 5 ? B 29 ? 8 1 1 B U 23 1_555 B A 28 1_555 -0.575 3.452 -0.147 0.952 -7.562 -70.734 19 B_U23:A28_B B 23 ? B 28 ? 23 3 1 B C 8 1_555 B G 26 1_555 0.367 -0.104 0.339 2.143 -0.107 -1.303 20 B_C8:G26_B B 8 ? B 26 ? 19 1 1 B C 9 1_555 B G 25 1_555 0.680 -0.152 -0.180 22.684 -20.006 -1.173 21 B_C9:G25_B B 9 ? B 25 ? 19 1 1 B A 10 1_555 B C 21 1_555 -4.274 -0.808 0.597 10.851 -4.008 -12.921 22 B_A10:C21_B B 10 ? B 21 ? ? 1 1 B G 11 1_555 B C 20 1_555 -0.384 -0.268 0.276 9.185 -15.721 1.976 23 B_G11:C20_B B 11 ? B 20 ? 19 1 1 B C 12 1_555 B G 19 1_555 0.427 -0.257 -0.305 7.291 -18.218 -0.054 24 B_C12:G19_B B 12 ? B 19 ? 19 1 1 B C 13 1_555 B G 18 1_555 -0.071 -0.055 0.116 -3.574 3.387 2.197 25 B_C13:G18_B B 13 ? B 18 ? 19 1 1 B G 14 1_555 B A 17 1_555 6.844 -5.138 1.106 19.357 5.839 -11.307 26 B_G14:A17_B B 14 ? B 17 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 33 1_555 A G 2 1_555 A C 32 1_555 -0.518 -1.934 3.187 -1.532 7.224 33.495 -4.322 0.659 2.743 12.349 2.618 34.276 1 AA_G1G2:C32C33_AA A 1 ? A 33 ? A 2 ? A 32 ? 1 A G 2 1_555 A C 32 1_555 A C 3 1_555 A G 31 1_555 -0.168 -1.312 3.286 -3.098 5.354 34.181 -3.000 -0.182 3.055 9.018 5.217 34.720 2 AA_G2C3:G31C32_AA A 2 ? A 32 ? A 3 ? A 31 ? 1 A C 3 1_555 A G 31 1_555 A G 4 1_555 A C 30 1_555 0.733 -1.862 3.080 5.164 10.635 32.863 -4.518 -0.538 2.461 18.085 -8.781 34.869 3 AA_C3G4:C30G31_AA A 3 ? A 31 ? A 4 ? A 30 ? 1 A G 4 1_555 A C 30 1_555 A A 5 1_555 A G 29 1_555 -0.831 -1.308 3.222 6.031 5.081 29.623 -3.407 2.679 2.746 9.722 -11.540 30.632 4 AA_G4A5:G29C30_AA A 4 ? A 30 ? A 5 ? A 29 ? 1 A A 5 1_555 A G 29 1_555 A U 23 1_555 A A 28 1_555 0.998 -3.669 2.983 -110.103 -128.532 168.862 -1.721 -0.596 3.176 -64.285 55.068 178.958 5 AA_A5U23:A28G29_AA A 5 ? A 29 ? A 23 ? A 28 ? 1 A U 23 1_555 A A 28 1_555 A C 8 1_555 A G 26 1_555 -3.342 5.694 1.582 -166.699 -49.251 -16.623 -2.822 -1.771 -1.346 25.374 -85.883 -173.887 6 AA_U23C8:G26A28_AA A 23 ? A 28 ? A 8 ? A 26 ? 1 A C 8 1_555 A G 26 1_555 A C 9 1_555 A G 25 1_555 0.288 -1.088 3.224 -2.025 10.713 36.535 -2.945 -0.683 2.788 16.638 3.146 38.074 7 AA_C8C9:G25G26_AA A 8 ? A 26 ? A 9 ? A 25 ? 1 A C 9 1_555 A G 25 1_555 A A 10 1_555 A C 21 1_555 3.141 -1.396 2.483 -0.066 -1.261 37.958 -2.021 -4.832 2.521 -1.938 0.102 37.978 8 AA_C9A10:C21G25_AA A 9 ? A 25 ? A 10 ? A 21 ? 1 A A 10 1_555 A C 21 1_555 A G 11 1_555 A C 20 1_555 0.442 -1.178 3.436 -0.780 10.783 46.520 -2.330 -0.610 3.098 13.440 0.972 47.692 9 AA_A10G11:C20C21_AA A 10 ? A 21 ? A 11 ? A 20 ? 1 A G 11 1_555 A C 20 1_555 A C 12 1_555 A G 19 1_555 0.224 -1.458 3.189 -0.120 5.238 37.788 -2.857 -0.357 2.968 8.040 0.184 38.136 10 AA_G11C12:G19C20_AA A 11 ? A 20 ? A 12 ? A 19 ? 1 A C 12 1_555 A G 19 1_555 A C 13 1_555 A G 18 1_555 -0.150 -1.702 3.491 1.329 12.284 36.920 -4.036 0.385 2.799 18.764 -2.029 38.864 11 AA_C12C13:G18G19_AA A 12 ? A 19 ? A 13 ? A 18 ? 1 A C 13 1_555 A G 18 1_555 A G 14 1_555 A A 17 1_555 -1.721 -1.142 2.740 -3.743 4.669 51.196 -1.581 1.765 2.744 5.382 4.314 51.521 12 AA_C13G14:A17G18_AA A 13 ? A 18 ? A 14 ? A 17 ? 1 B G 1 1_555 B C 33 1_555 B G 2 1_555 B C 32 1_555 -0.714 -1.707 3.099 -0.755 6.636 34.685 -3.701 1.077 2.750 11.004 1.252 35.303 13 BB_G1G2:C32C33_BB B 1 ? B 33 ? B 2 ? B 32 ? 1 B G 2 1_555 B C 32 1_555 B C 3 1_555 B G 31 1_555 0.271 -1.351 3.276 -1.644 5.859 32.092 -3.383 -0.758 2.972 10.481 2.940 32.649 14 BB_G2C3:G31C32_BB B 2 ? B 32 ? B 3 ? B 31 ? 1 B C 3 1_555 B G 31 1_555 B G 4 1_555 B C 30 1_555 0.747 -1.888 3.152 3.958 9.872 33.171 -4.508 -0.708 2.571 16.763 -6.722 34.789 15 BB_C3G4:C30G31_BB B 3 ? B 31 ? B 4 ? B 30 ? 1 B G 4 1_555 B C 30 1_555 B A 5 1_555 B G 29 1_555 -0.739 -1.137 3.198 6.797 5.412 30.814 -2.969 2.479 2.743 9.940 -12.483 31.987 16 BB_G4A5:G29C30_BB B 4 ? B 30 ? B 5 ? B 29 ? 1 B A 5 1_555 B G 29 1_555 B U 23 1_555 B A 28 1_555 1.143 -4.177 2.333 -110.900 -122.105 147.741 -1.818 -0.819 2.883 -61.269 55.647 175.830 17 BB_A5U23:A28G29_BB B 5 ? B 29 ? B 23 ? B 28 ? 1 B U 23 1_555 B A 28 1_555 B C 8 1_555 B G 26 1_555 -3.860 5.546 -0.143 -166.985 -45.194 -111.382 -2.837 -1.701 -1.400 22.756 -84.080 -176.052 18 BB_U23C8:G26A28_BB B 23 ? B 28 ? B 8 ? B 26 ? 1 B C 8 1_555 B G 26 1_555 B C 9 1_555 B G 25 1_555 0.358 -0.881 2.713 5.452 6.272 35.855 -2.093 0.038 2.553 10.022 -8.712 36.775 19 BB_C8C9:G25G26_BB B 8 ? B 26 ? B 9 ? B 25 ? 1 B C 9 1_555 B G 25 1_555 B A 10 1_555 B C 21 1_555 2.846 -1.370 2.876 -5.517 8.988 39.988 -2.695 -4.497 2.138 12.874 7.903 41.300 20 BB_C9A10:C21G25_BB B 9 ? B 25 ? B 10 ? B 21 ? 1 B A 10 1_555 B C 21 1_555 B G 11 1_555 B C 20 1_555 0.360 -1.361 3.379 -5.723 8.311 49.647 -2.179 -0.824 3.072 9.782 6.736 50.598 21 BB_A10G11:C20C21_BB B 10 ? B 21 ? B 11 ? B 20 ? 1 B G 11 1_555 B C 20 1_555 B C 12 1_555 B G 19 1_555 -0.087 -1.454 3.337 0.666 3.516 37.805 -2.683 0.218 3.192 5.411 -1.026 37.967 22 BB_G11C12:G19C20_BB B 11 ? B 20 ? B 12 ? B 19 ? 1 B C 12 1_555 B G 19 1_555 B C 13 1_555 B G 18 1_555 -0.124 -1.808 3.512 -1.261 10.819 31.446 -4.947 0.008 2.759 19.254 2.244 33.234 23 BB_C12C13:G18G19_BB B 12 ? B 19 ? B 13 ? B 18 ? 1 B C 13 1_555 B G 18 1_555 B G 14 1_555 B A 17 1_555 -1.768 -1.047 2.543 -5.402 6.774 52.072 -1.523 1.715 2.556 7.655 6.105 52.738 24 BB_C13G14:A17G18_BB B 13 ? B 18 ? B 14 ? B 17 ? # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id QB3 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id QB3 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '6-methoxy-7-[(1-methylpiperidin-4-yl)methoxy]quinazolin-4-ol' QB3 3 'SODIUM ION' NA 4 'MAGNESIUM ION' MG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1O15 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #