data_8D2B # _entry.id 8D2B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8D2B pdb_00008d2b 10.2210/pdb8d2b/pdb WWPDB D_1000265895 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8D2B _pdbx_database_status.recvd_initial_deposition_date 2022-05-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Menichelli, E.' 1 ? 'Spraggon, G.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 119 _citation.language ? _citation.page_first e2213117119 _citation.page_last e2213117119 _citation.title 'Discovery of small molecules that target a tertiary-structured RNA.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2213117119 _citation.pdbx_database_id_PubMed 36413497 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Menichelli, E.' 1 ? primary 'Lam, B.J.' 2 0000-0001-6592-2098 primary 'Wang, Y.' 3 ? primary 'Wang, V.S.' 4 ? primary 'Shaffer, J.' 5 ? primary 'Tjhung, K.F.' 6 ? primary 'Bursulaya, B.' 7 ? primary 'Nguyen, T.N.' 8 ? primary 'Vo, T.' 9 ? primary 'Alper, P.B.' 10 ? primary 'McAllister, C.S.' 11 0000-0003-3483-4444 primary 'Jones, D.H.' 12 ? primary 'Spraggon, G.' 13 ? primary 'Michellys, P.Y.' 14 0000-0002-8660-9292 primary 'Joslin, J.' 15 0000-0002-6842-688X primary 'Joyce, G.F.' 16 0000-0003-0603-2874 primary 'Rogers, J.' 17 0000-0002-5364-2790 # _cell.angle_alpha 95.660 _cell.angle_alpha_esd ? _cell.angle_beta 91.510 _cell.angle_beta_esd ? _cell.angle_gamma 109.960 _cell.angle_gamma_esd ? _cell.entry_id 8D2B _cell.details ? _cell.formula_units_Z ? _cell.length_a 23.074 _cell.length_a_esd ? _cell.length_b 29.567 _cell.length_b_esd ? _cell.length_c 80.309 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8D2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (33-MER)' 10637.426 2 ? ? ? ? 2 non-polymer syn '6-methoxy-7-[3-(piperidin-1-yl)propoxy]quinazolin-4-ol' 317.383 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 5 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 4 ? ? ? ? 5 water nat water 18.015 319 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGCGAUACCAGCCGAAAGGCCCUUGGCAGCGCC _entity_poly.pdbx_seq_one_letter_code_can GGCGAUACCAGCCGAAAGGCCCUUGGCAGCGCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 C n 1 4 G n 1 5 A n 1 6 U n 1 7 A n 1 8 C n 1 9 C n 1 10 A n 1 11 G n 1 12 C n 1 13 C n 1 14 G n 1 15 A n 1 16 A n 1 17 A n 1 18 G n 1 19 G n 1 20 C n 1 21 C n 1 22 C n 1 23 U n 1 24 U n 1 25 G n 1 26 G n 1 27 C n 1 28 A n 1 29 G n 1 30 C n 1 31 G n 1 32 C n 1 33 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 33 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8D2B _struct_ref.pdbx_db_accession 8D2B _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8D2B A 1 ? 33 ? 8D2B 1 ? 33 ? 1 33 2 1 8D2B B 1 ? 33 ? 8D2B 1 ? 33 ? 1 33 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 QAX non-polymer . '6-methoxy-7-[3-(piperidin-1-yl)propoxy]quinazolin-4-ol' ? 'C17 H23 N3 O3' 317.383 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8D2B _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.40 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium cacodylate, PEG 8000, 2-methyl-2,4-pentanediol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-09-30 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9765 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 5.0.3' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9765 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 5.0.3 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8D2B _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.440 _reflns.d_resolution_low 20.34 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 33441 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.35 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.8 _reflns.pdbx_Rmerge_I_obs 0.0705 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.26 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.0424 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star 0.999 _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 1.441 _reflns_shell.d_res_low 1.492 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2581 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.835 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 63.280 _refine.B_iso_mean 20.5825 _refine.B_iso_min 3.600 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8D2B _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4400 _refine.ls_d_res_low 20.3400 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 33420 _refine.ls_number_reflns_R_free 1721 _refine.ls_number_reflns_R_work 31699 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.3900 _refine.ls_percent_reflns_R_free 5.1500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2022 _refine.ls_R_factor_R_free 0.2260 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2009 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.970 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 1O15' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.0000 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.4400 _refine_hist.d_res_low 20.3400 _refine_hist.number_atoms_solvent 319 _refine_hist.number_atoms_total 1828 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 66 _refine_hist.pdbx_B_iso_mean_ligand 25.47 _refine_hist.pdbx_B_iso_mean_solvent 24.96 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1408 _refine_hist.pdbx_number_atoms_ligand 101 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4400 1.4800 2029 . 111 1918 69.0000 . . . 0.3051 0.0000 0.2528 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.4800 1.5300 2844 . 150 2694 94.0000 . . . 0.2598 0.0000 0.2451 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.5300 1.5900 2755 . 154 2601 94.0000 . . . 0.2521 0.0000 0.2459 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.5900 1.6500 2867 . 152 2715 94.0000 . . . 0.2742 0.0000 0.2328 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.6500 1.7200 2801 . 136 2665 95.0000 . . . 0.2494 0.0000 0.2179 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.7200 1.8100 2852 . 138 2714 96.0000 . . . 0.2558 0.0000 0.2087 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.8100 1.9300 2864 . 143 2721 95.0000 . . . 0.2114 0.0000 0.2031 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 1.9300 2.0800 2858 . 133 2725 96.0000 . . . 0.2297 0.0000 0.2038 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.0800 2.2900 2882 . 158 2724 96.0000 . . . 0.2026 0.0000 0.1924 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.2900 2.6200 2878 . 142 2736 97.0000 . . . 0.2358 0.0000 0.2114 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.6200 3.2900 2910 . 147 2763 97.0000 . . . 0.2297 0.0000 0.2066 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 3.2900 20.3400 2880 . 157 2723 97.0000 . . . 0.1941 0.0000 0.1612 . . . . . . . 12 . . . # _struct.entry_id 8D2B _struct.title 'Crystal structure of theophylline aptamer in complex with TAL2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8D2B _struct_keywords.text 'RNA, aptamer, theophylline' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 4 ? N N N 5 ? O N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 4 OP2 ? ? ? 1_555 E MG . MG ? ? A G 4 A MG 103 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc2 metalc ? ? A U 6 O4 ? ? ? 1_555 G NA . NA ? ? A U 6 A NA 105 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc3 metalc ? ? A C 22 "O2'" ? ? ? 1_555 G NA . NA ? ? A C 22 A NA 105 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc4 metalc ? ? A U 23 "O2'" ? ? ? 1_555 F NA . NA ? ? A U 23 A NA 104 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc5 metalc ? ? A U 23 O2 ? ? ? 1_555 F NA . NA ? ? A U 23 A NA 104 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 102 A HOH 217 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 102 A HOH 256 1_555 ? ? ? ? ? ? ? 2.097 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 102 A HOH 259 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 102 A HOH 305 1_555 ? ? ? ? ? ? ? 2.049 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 102 A HOH 313 1_555 ? ? ? ? ? ? ? 2.150 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 244 1_555 ? ? ? ? ? ? ? 2.313 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 250 1_555 ? ? ? ? ? ? ? 2.147 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 264 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 277 1_555 ? ? ? ? ? ? ? 2.031 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 N HOH . O ? ? A MG 103 A HOH 299 1_555 ? ? ? ? ? ? ? 2.225 ? ? metalc16 metalc ? ? F NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 104 A HOH 236 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc17 metalc ? ? F NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 104 A HOH 288 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc18 metalc ? ? F NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 104 A HOH 307 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc19 metalc ? ? F NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 104 A HOH 325 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc20 metalc ? ? G NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 105 A HOH 271 1_555 ? ? ? ? ? ? ? 2.475 ? ? metalc21 metalc ? ? G NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 105 A HOH 287 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc22 metalc ? ? G NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 105 A HOH 322 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc23 metalc ? ? B U 6 O4 ? ? ? 1_555 M NA . NA ? ? B U 6 B NA 106 1_555 ? ? ? ? ? ? ? 2.409 ? ? metalc24 metalc ? ? B C 22 "O2'" ? ? ? 1_555 M NA . NA ? ? B C 22 B NA 106 1_555 ? ? ? ? ? ? ? 2.275 ? ? metalc25 metalc ? ? B U 23 OP2 ? ? ? 1_555 K MG . MG ? ? B U 23 B MG 104 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc26 metalc ? ? B U 23 "O2'" ? ? ? 1_555 L NA . NA ? ? B U 23 B NA 105 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc27 metalc ? ? B U 23 O2 ? ? ? 1_555 L NA . NA ? ? B U 23 B NA 105 1_555 ? ? ? ? ? ? ? 2.455 ? ? metalc28 metalc ? ? I MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 102 B HOH 218 1_555 ? ? ? ? ? ? ? 1.976 ? ? metalc29 metalc ? ? I MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 102 B HOH 229 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc30 metalc ? ? I MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 102 B HOH 251 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc31 metalc ? ? I MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 102 B HOH 260 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc32 metalc ? ? I MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 102 B HOH 281 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc33 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 103 B HOH 297 1_655 ? ? ? ? ? ? ? 2.123 ? ? metalc34 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 103 B HOH 304 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc35 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 103 B HOH 305 1_555 ? ? ? ? ? ? ? 2.908 ? ? metalc36 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 103 B HOH 315 1_555 ? ? ? ? ? ? ? 2.237 ? ? metalc37 metalc ? ? J MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 103 B HOH 346 1_655 ? ? ? ? ? ? ? 2.202 ? ? metalc38 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 104 B HOH 201 1_555 ? ? ? ? ? ? ? 2.600 ? ? metalc39 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 104 B HOH 267 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc40 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 104 B HOH 285 1_555 ? ? ? ? ? ? ? 2.106 ? ? metalc41 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 104 B HOH 296 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc42 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 104 B HOH 305 1_555 ? ? ? ? ? ? ? 2.260 ? ? metalc43 metalc ? ? K MG . MG ? ? ? 1_555 O HOH . O ? ? B MG 104 B HOH 328 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc44 metalc ? ? L NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 105 B HOH 228 1_555 ? ? ? ? ? ? ? 2.425 ? ? metalc45 metalc ? ? L NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 105 B HOH 294 1_555 ? ? ? ? ? ? ? 2.390 ? ? metalc46 metalc ? ? L NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 105 B HOH 300 1_555 ? ? ? ? ? ? ? 2.413 ? ? metalc47 metalc ? ? L NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 105 B HOH 327 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc48 metalc ? ? M NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 106 B HOH 263 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc49 metalc ? ? M NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 106 B HOH 307 1_555 ? ? ? ? ? ? ? 2.404 ? ? metalc50 metalc ? ? M NA . NA ? ? ? 1_555 O HOH . O ? ? B NA 106 B HOH 319 1_555 ? ? ? ? ? ? ? 2.470 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 33 N3 ? ? A G 1 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 33 O2 ? ? A G 1 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 33 N4 ? ? A G 1 A C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 32 N3 ? ? A G 2 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 32 O2 ? ? A G 2 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 32 N4 ? ? A G 2 A C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 3 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 3 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 3 A G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 30 N3 ? ? A G 4 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 30 O2 ? ? A G 4 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 30 N4 ? ? A G 4 A C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N1 ? ? ? 1_555 A G 29 N1 ? ? A A 5 A G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A A 5 N6 ? ? ? 1_555 A G 29 O6 ? ? A A 5 A G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog15 hydrog ? ? A U 6 N3 ? ? ? 1_555 A U 23 O4 ? ? A U 6 A U 23 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog16 hydrog ? ? A U 6 O2 ? ? ? 1_555 A A 28 N6 ? ? A U 6 A A 28 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog17 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 26 N1 ? ? A C 8 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 26 O6 ? ? A C 8 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 26 N2 ? ? A C 8 A G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 9 N3 ? ? ? 1_555 A G 25 N1 ? ? A C 9 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 9 N4 ? ? ? 1_555 A G 25 O6 ? ? A C 9 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 9 O2 ? ? ? 1_555 A G 25 N2 ? ? A C 9 A G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A A 10 N6 ? ? ? 1_555 A C 21 O2 ? ? A A 10 A C 21 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 20 N3 ? ? A G 11 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 20 O2 ? ? A G 11 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 20 N4 ? ? A G 11 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 19 N1 ? ? A C 12 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 19 O6 ? ? A C 12 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 19 N2 ? ? A C 12 A G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 18 N1 ? ? A C 13 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 18 O6 ? ? A C 13 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 18 N2 ? ? A C 13 A G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 N2 ? ? ? 1_555 A A 17 N7 ? ? A G 14 A A 17 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog34 hydrog ? ? A U 23 N3 ? ? ? 1_555 A A 28 N7 ? ? A U 23 A A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog35 hydrog ? ? A U 23 O4 ? ? ? 1_555 A A 28 N6 ? ? A U 23 A A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog36 hydrog ? ? B G 1 N1 ? ? ? 1_555 B C 33 N3 ? ? B G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B G 1 N2 ? ? ? 1_555 B C 33 O2 ? ? B G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 33 N4 ? ? B G 1 B C 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 32 N3 ? ? B G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 32 O2 ? ? B G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 32 N4 ? ? B G 2 B C 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B C 3 N3 ? ? ? 1_555 B G 31 N1 ? ? B C 3 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B C 3 N4 ? ? ? 1_555 B G 31 O6 ? ? B C 3 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B C 3 O2 ? ? ? 1_555 B G 31 N2 ? ? B C 3 B G 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B G 4 N1 ? ? ? 1_555 B C 30 N3 ? ? B G 4 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B G 4 N2 ? ? ? 1_555 B C 30 O2 ? ? B G 4 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B G 4 O6 ? ? ? 1_555 B C 30 N4 ? ? B G 4 B C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B A 5 N1 ? ? ? 1_555 B G 29 N1 ? ? B A 5 B G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog49 hydrog ? ? B A 5 N6 ? ? ? 1_555 B G 29 O6 ? ? B A 5 B G 29 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog50 hydrog ? ? B U 6 N3 ? ? ? 1_555 B U 23 O4 ? ? B U 6 B U 23 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog51 hydrog ? ? B U 6 O2 ? ? ? 1_555 B A 28 N6 ? ? B U 6 B A 28 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog52 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 26 N1 ? ? B C 8 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 26 O6 ? ? B C 8 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 26 N2 ? ? B C 8 B G 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B C 9 N3 ? ? ? 1_555 B G 25 N1 ? ? B C 9 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B C 9 N4 ? ? ? 1_555 B G 25 O6 ? ? B C 9 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 25 N2 ? ? B C 9 B G 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B A 10 N6 ? ? ? 1_555 B C 21 O2 ? ? B A 10 B C 21 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog59 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 20 N3 ? ? B G 11 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 20 O2 ? ? B G 11 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 20 N4 ? ? B G 11 B C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 19 N1 ? ? B C 12 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 19 O6 ? ? B C 12 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 19 N2 ? ? B C 12 B G 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 18 N1 ? ? B C 13 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 18 O6 ? ? B C 13 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 18 N2 ? ? B C 13 B G 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B G 14 N2 ? ? ? 1_555 B A 17 N7 ? ? B G 14 B A 17 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog69 hydrog ? ? B G 14 N3 ? ? ? 1_555 B A 17 N6 ? ? B G 14 B A 17 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog70 hydrog ? ? B U 23 N3 ? ? ? 1_555 B A 28 N7 ? ? B U 23 B A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog71 hydrog ? ? B U 23 O4 ? ? ? 1_555 B A 28 N6 ? ? B U 23 B A 28 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _atom_sites.entry_id 8D2B _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.043339 _atom_sites.fract_transf_matrix[1][2] 0.015740 _atom_sites.fract_transf_matrix[1][3] 0.002965 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035983 _atom_sites.fract_transf_matrix[2][3] 0.004149 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012539 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H MG N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 G 4 4 4 G G A . n A 1 5 A 5 5 5 A A A . n A 1 6 U 6 6 6 U U A . n A 1 7 A 7 7 7 A A A . n A 1 8 C 8 8 8 C C A . n A 1 9 C 9 9 9 C C A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 C 12 12 12 C C A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 A 15 15 15 A A A . n A 1 16 A 16 16 16 A A A . n A 1 17 A 17 17 17 A A A . n A 1 18 G 18 18 18 G G A . n A 1 19 G 19 19 19 G G A . n A 1 20 C 20 20 20 C C A . n A 1 21 C 21 21 21 C C A . n A 1 22 C 22 22 22 C C A . n A 1 23 U 23 23 23 U U A . n A 1 24 U 24 24 24 U U A . n A 1 25 G 25 25 25 G G A . n A 1 26 G 26 26 26 G G A . n A 1 27 C 27 27 27 C C A . n A 1 28 A 28 28 28 A A A . n A 1 29 G 29 29 29 G G A . n A 1 30 C 30 30 30 C C A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 C 33 33 33 C C A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 C 3 3 3 C C B . n B 1 4 G 4 4 4 G G B . n B 1 5 A 5 5 5 A A B . n B 1 6 U 6 6 6 U U B . n B 1 7 A 7 7 7 A A B . n B 1 8 C 8 8 8 C C B . n B 1 9 C 9 9 9 C C B . n B 1 10 A 10 10 10 A A B . n B 1 11 G 11 11 11 G G B . n B 1 12 C 12 12 12 C C B . n B 1 13 C 13 13 13 C C B . n B 1 14 G 14 14 14 G G B . n B 1 15 A 15 15 15 A A B . n B 1 16 A 16 16 16 A A B . n B 1 17 A 17 17 17 A A B . n B 1 18 G 18 18 18 G G B . n B 1 19 G 19 19 19 G G B . n B 1 20 C 20 20 20 C C B . n B 1 21 C 21 21 21 C C B . n B 1 22 C 22 22 22 C C B . n B 1 23 U 23 23 23 U U B . n B 1 24 U 24 24 24 U U B . n B 1 25 G 25 25 25 G G B . n B 1 26 G 26 26 26 G G B . n B 1 27 C 27 27 27 C C B . n B 1 28 A 28 28 28 A A B . n B 1 29 G 29 29 29 G G B . n B 1 30 C 30 30 30 C C B . n B 1 31 G 31 31 31 G G B . n B 1 32 C 32 32 32 C C B . n B 1 33 C 33 33 33 C C B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email glen.spraggon@novartis.com _pdbx_contact_author.name_first Glen _pdbx_contact_author.name_last Spraggon _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7880-8454 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QAX 1 101 34 QAX LIG A . D 3 MG 1 102 2 MG MG A . E 3 MG 1 103 3 MG MG A . F 4 NA 1 104 6 NA NA A . G 4 NA 1 105 8 NA NA A . H 2 QAX 1 101 34 QAX LIG B . I 3 MG 1 102 1 MG MG B . J 3 MG 1 103 4 MG MG B . K 3 MG 1 104 5 MG MG B . L 4 NA 1 105 7 NA NA B . M 4 NA 1 106 9 NA NA B . N 5 HOH 1 201 331 HOH HOH A . N 5 HOH 2 202 260 HOH HOH A . N 5 HOH 3 203 269 HOH HOH A . N 5 HOH 4 204 311 HOH HOH A . N 5 HOH 5 205 332 HOH HOH A . N 5 HOH 6 206 365 HOH HOH A . N 5 HOH 7 207 126 HOH HOH A . N 5 HOH 8 208 245 HOH HOH A . N 5 HOH 9 209 319 HOH HOH A . N 5 HOH 10 210 186 HOH HOH A . N 5 HOH 11 211 387 HOH HOH A . N 5 HOH 12 212 313 HOH HOH A . N 5 HOH 13 213 134 HOH HOH A . N 5 HOH 14 214 116 HOH HOH A . N 5 HOH 15 215 88 HOH HOH A . N 5 HOH 16 216 140 HOH HOH A . N 5 HOH 17 217 206 HOH HOH A . N 5 HOH 18 218 286 HOH HOH A . N 5 HOH 19 219 79 HOH HOH A . N 5 HOH 20 220 232 HOH HOH A . N 5 HOH 21 221 341 HOH HOH A . N 5 HOH 22 222 189 HOH HOH A . N 5 HOH 23 223 275 HOH HOH A . N 5 HOH 24 224 187 HOH HOH A . N 5 HOH 25 225 224 HOH HOH A . N 5 HOH 26 226 161 HOH HOH A . N 5 HOH 27 227 350 HOH HOH A . N 5 HOH 28 228 63 HOH HOH A . N 5 HOH 29 229 163 HOH HOH A . N 5 HOH 30 230 335 HOH HOH A . N 5 HOH 31 231 144 HOH HOH A . N 5 HOH 32 232 8 HOH HOH A . N 5 HOH 33 233 82 HOH HOH A . N 5 HOH 34 234 107 HOH HOH A . N 5 HOH 35 235 4 HOH HOH A . N 5 HOH 36 236 100 HOH HOH A . N 5 HOH 37 237 81 HOH HOH A . N 5 HOH 38 238 10 HOH HOH A . N 5 HOH 39 239 195 HOH HOH A . N 5 HOH 40 240 210 HOH HOH A . N 5 HOH 41 241 32 HOH HOH A . N 5 HOH 42 242 70 HOH HOH A . N 5 HOH 43 243 127 HOH HOH A . N 5 HOH 44 244 36 HOH HOH A . N 5 HOH 45 245 149 HOH HOH A . N 5 HOH 46 246 368 HOH HOH A . N 5 HOH 47 247 289 HOH HOH A . N 5 HOH 48 248 136 HOH HOH A . N 5 HOH 49 249 216 HOH HOH A . N 5 HOH 50 250 15 HOH HOH A . N 5 HOH 51 251 65 HOH HOH A . N 5 HOH 52 252 242 HOH HOH A . N 5 HOH 53 253 47 HOH HOH A . N 5 HOH 54 254 30 HOH HOH A . N 5 HOH 55 255 86 HOH HOH A . N 5 HOH 56 256 34 HOH HOH A . N 5 HOH 57 257 203 HOH HOH A . N 5 HOH 58 258 178 HOH HOH A . N 5 HOH 59 259 31 HOH HOH A . N 5 HOH 60 260 59 HOH HOH A . N 5 HOH 61 261 168 HOH HOH A . N 5 HOH 62 262 23 HOH HOH A . N 5 HOH 63 263 11 HOH HOH A . N 5 HOH 64 264 46 HOH HOH A . N 5 HOH 65 265 279 HOH HOH A . N 5 HOH 66 266 307 HOH HOH A . N 5 HOH 67 267 153 HOH HOH A . N 5 HOH 68 268 367 HOH HOH A . N 5 HOH 69 269 193 HOH HOH A . N 5 HOH 70 270 258 HOH HOH A . N 5 HOH 71 271 109 HOH HOH A . N 5 HOH 72 272 96 HOH HOH A . N 5 HOH 73 273 378 HOH HOH A . N 5 HOH 74 274 42 HOH HOH A . N 5 HOH 75 275 251 HOH HOH A . N 5 HOH 76 276 133 HOH HOH A . N 5 HOH 77 277 113 HOH HOH A . N 5 HOH 78 278 124 HOH HOH A . N 5 HOH 79 279 405 HOH HOH A . N 5 HOH 80 280 99 HOH HOH A . N 5 HOH 81 281 221 HOH HOH A . N 5 HOH 82 282 223 HOH HOH A . N 5 HOH 83 283 7 HOH HOH A . N 5 HOH 84 284 108 HOH HOH A . N 5 HOH 85 285 154 HOH HOH A . N 5 HOH 86 286 179 HOH HOH A . N 5 HOH 87 287 17 HOH HOH A . N 5 HOH 88 288 39 HOH HOH A . N 5 HOH 89 289 53 HOH HOH A . N 5 HOH 90 290 44 HOH HOH A . N 5 HOH 91 291 238 HOH HOH A . N 5 HOH 92 292 3 HOH HOH A . N 5 HOH 93 293 241 HOH HOH A . N 5 HOH 94 294 60 HOH HOH A . N 5 HOH 95 295 197 HOH HOH A . N 5 HOH 96 296 236 HOH HOH A . N 5 HOH 97 297 169 HOH HOH A . N 5 HOH 98 298 218 HOH HOH A . N 5 HOH 99 299 117 HOH HOH A . N 5 HOH 100 300 55 HOH HOH A . N 5 HOH 101 301 184 HOH HOH A . N 5 HOH 102 302 14 HOH HOH A . N 5 HOH 103 303 123 HOH HOH A . N 5 HOH 104 304 66 HOH HOH A . N 5 HOH 105 305 45 HOH HOH A . N 5 HOH 106 306 52 HOH HOH A . N 5 HOH 107 307 29 HOH HOH A . N 5 HOH 108 308 180 HOH HOH A . N 5 HOH 109 309 152 HOH HOH A . N 5 HOH 110 310 262 HOH HOH A . N 5 HOH 111 311 386 HOH HOH A . N 5 HOH 112 312 167 HOH HOH A . N 5 HOH 113 313 61 HOH HOH A . N 5 HOH 114 314 111 HOH HOH A . N 5 HOH 115 315 21 HOH HOH A . N 5 HOH 116 316 102 HOH HOH A . N 5 HOH 117 317 57 HOH HOH A . N 5 HOH 118 318 215 HOH HOH A . N 5 HOH 119 319 322 HOH HOH A . N 5 HOH 120 320 217 HOH HOH A . N 5 HOH 121 321 208 HOH HOH A . N 5 HOH 122 322 43 HOH HOH A . N 5 HOH 123 323 147 HOH HOH A . N 5 HOH 124 324 233 HOH HOH A . N 5 HOH 125 325 143 HOH HOH A . N 5 HOH 126 326 93 HOH HOH A . N 5 HOH 127 327 338 HOH HOH A . N 5 HOH 128 328 196 HOH HOH A . N 5 HOH 129 329 41 HOH HOH A . N 5 HOH 130 330 299 HOH HOH A . N 5 HOH 131 331 158 HOH HOH A . N 5 HOH 132 332 249 HOH HOH A . N 5 HOH 133 333 156 HOH HOH A . N 5 HOH 134 334 234 HOH HOH A . N 5 HOH 135 335 219 HOH HOH A . N 5 HOH 136 336 361 HOH HOH A . N 5 HOH 137 337 417 HOH HOH A . N 5 HOH 138 338 295 HOH HOH A . N 5 HOH 139 339 301 HOH HOH A . N 5 HOH 140 340 165 HOH HOH A . N 5 HOH 141 341 118 HOH HOH A . N 5 HOH 142 342 90 HOH HOH A . N 5 HOH 143 343 410 HOH HOH A . N 5 HOH 144 344 220 HOH HOH A . N 5 HOH 145 345 129 HOH HOH A . N 5 HOH 146 346 248 HOH HOH A . N 5 HOH 147 347 91 HOH HOH A . N 5 HOH 148 348 188 HOH HOH A . N 5 HOH 149 349 284 HOH HOH A . N 5 HOH 150 350 267 HOH HOH A . N 5 HOH 151 351 228 HOH HOH A . N 5 HOH 152 352 351 HOH HOH A . N 5 HOH 153 353 372 HOH HOH A . N 5 HOH 154 354 277 HOH HOH A . N 5 HOH 155 355 257 HOH HOH A . N 5 HOH 156 356 298 HOH HOH A . N 5 HOH 157 357 375 HOH HOH A . N 5 HOH 158 358 364 HOH HOH A . N 5 HOH 159 359 199 HOH HOH A . N 5 HOH 160 360 272 HOH HOH A . O 5 HOH 1 201 92 HOH HOH B . O 5 HOH 2 202 263 HOH HOH B . O 5 HOH 3 203 247 HOH HOH B . O 5 HOH 4 204 84 HOH HOH B . O 5 HOH 5 205 230 HOH HOH B . O 5 HOH 6 206 138 HOH HOH B . O 5 HOH 7 207 243 HOH HOH B . O 5 HOH 8 208 202 HOH HOH B . O 5 HOH 9 209 274 HOH HOH B . O 5 HOH 10 210 175 HOH HOH B . O 5 HOH 11 211 204 HOH HOH B . O 5 HOH 12 212 358 HOH HOH B . O 5 HOH 13 213 105 HOH HOH B . O 5 HOH 14 214 121 HOH HOH B . O 5 HOH 15 215 119 HOH HOH B . O 5 HOH 16 216 95 HOH HOH B . O 5 HOH 17 217 131 HOH HOH B . O 5 HOH 18 218 6 HOH HOH B . O 5 HOH 19 219 12 HOH HOH B . O 5 HOH 20 220 122 HOH HOH B . O 5 HOH 21 221 185 HOH HOH B . O 5 HOH 22 222 114 HOH HOH B . O 5 HOH 23 223 303 HOH HOH B . O 5 HOH 24 224 101 HOH HOH B . O 5 HOH 25 225 49 HOH HOH B . O 5 HOH 26 226 173 HOH HOH B . O 5 HOH 27 227 69 HOH HOH B . O 5 HOH 28 228 54 HOH HOH B . O 5 HOH 29 229 20 HOH HOH B . O 5 HOH 30 230 87 HOH HOH B . O 5 HOH 31 231 62 HOH HOH B . O 5 HOH 32 232 148 HOH HOH B . O 5 HOH 33 233 349 HOH HOH B . O 5 HOH 34 234 315 HOH HOH B . O 5 HOH 35 235 155 HOH HOH B . O 5 HOH 36 236 382 HOH HOH B . O 5 HOH 37 237 231 HOH HOH B . O 5 HOH 38 238 150 HOH HOH B . O 5 HOH 39 239 135 HOH HOH B . O 5 HOH 40 240 356 HOH HOH B . O 5 HOH 41 241 76 HOH HOH B . O 5 HOH 42 242 266 HOH HOH B . O 5 HOH 43 243 244 HOH HOH B . O 5 HOH 44 244 239 HOH HOH B . O 5 HOH 45 245 98 HOH HOH B . O 5 HOH 46 246 25 HOH HOH B . O 5 HOH 47 247 73 HOH HOH B . O 5 HOH 48 248 110 HOH HOH B . O 5 HOH 49 249 312 HOH HOH B . O 5 HOH 50 250 271 HOH HOH B . O 5 HOH 51 251 22 HOH HOH B . O 5 HOH 52 252 172 HOH HOH B . O 5 HOH 53 253 5 HOH HOH B . O 5 HOH 54 254 40 HOH HOH B . O 5 HOH 55 255 278 HOH HOH B . O 5 HOH 56 256 128 HOH HOH B . O 5 HOH 57 257 383 HOH HOH B . O 5 HOH 58 258 71 HOH HOH B . O 5 HOH 59 259 237 HOH HOH B . O 5 HOH 60 260 35 HOH HOH B . O 5 HOH 61 261 339 HOH HOH B . O 5 HOH 62 262 67 HOH HOH B . O 5 HOH 63 263 51 HOH HOH B . O 5 HOH 64 264 80 HOH HOH B . O 5 HOH 65 265 213 HOH HOH B . O 5 HOH 66 266 50 HOH HOH B . O 5 HOH 67 267 58 HOH HOH B . O 5 HOH 68 268 72 HOH HOH B . O 5 HOH 69 269 225 HOH HOH B . O 5 HOH 70 270 28 HOH HOH B . O 5 HOH 71 271 400 HOH HOH B . O 5 HOH 72 272 103 HOH HOH B . O 5 HOH 73 273 94 HOH HOH B . O 5 HOH 74 274 26 HOH HOH B . O 5 HOH 75 275 74 HOH HOH B . O 5 HOH 76 276 13 HOH HOH B . O 5 HOH 77 277 48 HOH HOH B . O 5 HOH 78 278 115 HOH HOH B . O 5 HOH 79 279 146 HOH HOH B . O 5 HOH 80 280 314 HOH HOH B . O 5 HOH 81 281 2 HOH HOH B . O 5 HOH 82 282 89 HOH HOH B . O 5 HOH 83 283 171 HOH HOH B . O 5 HOH 84 284 104 HOH HOH B . O 5 HOH 85 285 182 HOH HOH B . O 5 HOH 86 286 1 HOH HOH B . O 5 HOH 87 287 106 HOH HOH B . O 5 HOH 88 288 404 HOH HOH B . O 5 HOH 89 289 78 HOH HOH B . O 5 HOH 90 290 56 HOH HOH B . O 5 HOH 91 291 33 HOH HOH B . O 5 HOH 92 292 137 HOH HOH B . O 5 HOH 93 293 209 HOH HOH B . O 5 HOH 94 294 18 HOH HOH B . O 5 HOH 95 295 327 HOH HOH B . O 5 HOH 96 296 112 HOH HOH B . O 5 HOH 97 297 207 HOH HOH B . O 5 HOH 98 298 75 HOH HOH B . O 5 HOH 99 299 38 HOH HOH B . O 5 HOH 100 300 24 HOH HOH B . O 5 HOH 101 301 141 HOH HOH B . O 5 HOH 102 302 390 HOH HOH B . O 5 HOH 103 303 240 HOH HOH B . O 5 HOH 104 304 64 HOH HOH B . O 5 HOH 105 305 132 HOH HOH B . O 5 HOH 106 306 157 HOH HOH B . O 5 HOH 107 307 27 HOH HOH B . O 5 HOH 108 308 139 HOH HOH B . O 5 HOH 109 309 151 HOH HOH B . O 5 HOH 110 310 246 HOH HOH B . O 5 HOH 111 311 211 HOH HOH B . O 5 HOH 112 312 227 HOH HOH B . O 5 HOH 113 313 194 HOH HOH B . O 5 HOH 114 314 212 HOH HOH B . O 5 HOH 115 315 174 HOH HOH B . O 5 HOH 116 316 205 HOH HOH B . O 5 HOH 117 317 229 HOH HOH B . O 5 HOH 118 318 68 HOH HOH B . O 5 HOH 119 319 9 HOH HOH B . O 5 HOH 120 320 19 HOH HOH B . O 5 HOH 121 321 334 HOH HOH B . O 5 HOH 122 322 192 HOH HOH B . O 5 HOH 123 323 418 HOH HOH B . O 5 HOH 124 324 85 HOH HOH B . O 5 HOH 125 325 309 HOH HOH B . O 5 HOH 126 326 377 HOH HOH B . O 5 HOH 127 327 37 HOH HOH B . O 5 HOH 128 328 282 HOH HOH B . O 5 HOH 129 329 318 HOH HOH B . O 5 HOH 130 330 326 HOH HOH B . O 5 HOH 131 331 77 HOH HOH B . O 5 HOH 132 332 83 HOH HOH B . O 5 HOH 133 333 214 HOH HOH B . O 5 HOH 134 334 281 HOH HOH B . O 5 HOH 135 335 287 HOH HOH B . O 5 HOH 136 336 226 HOH HOH B . O 5 HOH 137 337 130 HOH HOH B . O 5 HOH 138 338 160 HOH HOH B . O 5 HOH 139 339 288 HOH HOH B . O 5 HOH 140 340 190 HOH HOH B . O 5 HOH 141 341 142 HOH HOH B . O 5 HOH 142 342 259 HOH HOH B . O 5 HOH 143 343 362 HOH HOH B . O 5 HOH 144 344 120 HOH HOH B . O 5 HOH 145 345 170 HOH HOH B . O 5 HOH 146 346 97 HOH HOH B . O 5 HOH 147 347 268 HOH HOH B . O 5 HOH 148 348 200 HOH HOH B . O 5 HOH 149 349 395 HOH HOH B . O 5 HOH 150 350 255 HOH HOH B . O 5 HOH 151 351 374 HOH HOH B . O 5 HOH 152 352 166 HOH HOH B . O 5 HOH 153 353 181 HOH HOH B . O 5 HOH 154 354 337 HOH HOH B . O 5 HOH 155 355 352 HOH HOH B . O 5 HOH 156 356 285 HOH HOH B . O 5 HOH 157 357 125 HOH HOH B . O 5 HOH 158 358 291 HOH HOH B . O 5 HOH 159 359 283 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,N 2 1 B,H,I,J,K,L,M,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A G 4 ? A G 4 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 244 ? 1_555 88.1 ? 2 OP2 ? A G 4 ? A G 4 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 250 ? 1_555 87.0 ? 3 O ? N HOH . ? A HOH 244 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 250 ? 1_555 89.1 ? 4 OP2 ? A G 4 ? A G 4 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 264 ? 1_555 94.6 ? 5 O ? N HOH . ? A HOH 244 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 264 ? 1_555 90.7 ? 6 O ? N HOH . ? A HOH 250 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 264 ? 1_555 178.4 ? 7 OP2 ? A G 4 ? A G 4 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 277 ? 1_555 85.7 ? 8 O ? N HOH . ? A HOH 244 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 277 ? 1_555 173.4 ? 9 O ? N HOH . ? A HOH 250 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 277 ? 1_555 88.1 ? 10 O ? N HOH . ? A HOH 264 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 277 ? 1_555 92.2 ? 11 OP2 ? A G 4 ? A G 4 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 299 ? 1_555 173.4 ? 12 O ? N HOH . ? A HOH 244 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 299 ? 1_555 88.2 ? 13 O ? N HOH . ? A HOH 250 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 299 ? 1_555 87.6 ? 14 O ? N HOH . ? A HOH 264 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 299 ? 1_555 90.8 ? 15 O ? N HOH . ? A HOH 277 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? N HOH . ? A HOH 299 ? 1_555 97.8 ? 16 O4 ? A U 6 ? A U 6 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 "O2'" ? A C 22 ? A C 22 ? 1_555 91.2 ? 17 O4 ? A U 6 ? A U 6 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 271 ? 1_555 170.6 ? 18 "O2'" ? A C 22 ? A C 22 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 271 ? 1_555 97.3 ? 19 O4 ? A U 6 ? A U 6 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 287 ? 1_555 101.0 ? 20 "O2'" ? A C 22 ? A C 22 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 287 ? 1_555 90.8 ? 21 O ? N HOH . ? A HOH 271 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 287 ? 1_555 83.1 ? 22 O4 ? A U 6 ? A U 6 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 93.6 ? 23 "O2'" ? A C 22 ? A C 22 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 94.6 ? 24 O ? N HOH . ? A HOH 271 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 81.6 ? 25 O ? N HOH . ? A HOH 287 ? 1_555 NA ? G NA . ? A NA 105 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 164.3 ? 26 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O2 ? A U 23 ? A U 23 ? 1_555 93.3 ? 27 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 236 ? 1_555 92.0 ? 28 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 236 ? 1_555 84.3 ? 29 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 288 ? 1_555 79.8 ? 30 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 288 ? 1_555 85.8 ? 31 O ? N HOH . ? A HOH 236 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 288 ? 1_555 166.8 ? 32 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 307 ? 1_555 163.6 ? 33 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 307 ? 1_555 90.6 ? 34 O ? N HOH . ? A HOH 236 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 307 ? 1_555 104.2 ? 35 O ? N HOH . ? A HOH 288 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 307 ? 1_555 84.6 ? 36 "O2'" ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 325 ? 1_555 80.8 ? 37 O2 ? A U 23 ? A U 23 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 325 ? 1_555 170.9 ? 38 O ? N HOH . ? A HOH 236 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 325 ? 1_555 88.9 ? 39 O ? N HOH . ? A HOH 288 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 325 ? 1_555 99.9 ? 40 O ? N HOH . ? A HOH 307 ? 1_555 NA ? F NA . ? A NA 104 ? 1_555 O ? N HOH . ? A HOH 325 ? 1_555 97.0 ? 41 O ? N HOH . ? A HOH 217 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 256 ? 1_555 89.4 ? 42 O ? N HOH . ? A HOH 217 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 259 ? 1_555 92.9 ? 43 O ? N HOH . ? A HOH 256 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 259 ? 1_555 86.8 ? 44 O ? N HOH . ? A HOH 217 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 305 ? 1_555 178.3 ? 45 O ? N HOH . ? A HOH 256 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 305 ? 1_555 90.2 ? 46 O ? N HOH . ? A HOH 259 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 305 ? 1_555 88.7 ? 47 O ? N HOH . ? A HOH 217 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 313 ? 1_555 89.5 ? 48 O ? N HOH . ? A HOH 256 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 313 ? 1_555 88.7 ? 49 O ? N HOH . ? A HOH 259 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 313 ? 1_555 174.9 ? 50 O ? N HOH . ? A HOH 305 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? N HOH . ? A HOH 313 ? 1_555 88.8 ? 51 O4 ? B U 6 ? B U 6 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 "O2'" ? B C 22 ? B C 22 ? 1_555 90.3 ? 52 O4 ? B U 6 ? B U 6 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 263 ? 1_555 170.8 ? 53 "O2'" ? B C 22 ? B C 22 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 263 ? 1_555 97.7 ? 54 O4 ? B U 6 ? B U 6 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 307 ? 1_555 103.4 ? 55 "O2'" ? B C 22 ? B C 22 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 307 ? 1_555 92.6 ? 56 O ? O HOH . ? B HOH 263 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 307 ? 1_555 80.7 ? 57 O4 ? B U 6 ? B U 6 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 319 ? 1_555 92.1 ? 58 "O2'" ? B C 22 ? B C 22 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 319 ? 1_555 91.9 ? 59 O ? O HOH . ? B HOH 263 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 319 ? 1_555 83.2 ? 60 O ? O HOH . ? B HOH 307 ? 1_555 NA ? M NA . ? B NA 106 ? 1_555 O ? O HOH . ? B HOH 319 ? 1_555 163.8 ? 61 OP2 ? B U 23 ? B U 23 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 201 ? 1_555 54.9 ? 62 OP2 ? B U 23 ? B U 23 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 267 ? 1_555 165.7 ? 63 O ? O HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 267 ? 1_555 139.2 ? 64 OP2 ? B U 23 ? B U 23 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 285 ? 1_555 113.3 ? 65 O ? O HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 285 ? 1_555 60.9 ? 66 O ? O HOH . ? B HOH 267 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 285 ? 1_555 79.4 ? 67 OP2 ? B U 23 ? B U 23 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 296 ? 1_555 85.0 ? 68 O ? O HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 296 ? 1_555 109.1 ? 69 O ? O HOH . ? B HOH 267 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 296 ? 1_555 86.0 ? 70 O ? O HOH . ? B HOH 285 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 296 ? 1_555 100.6 ? 71 OP2 ? B U 23 ? B U 23 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 82.6 ? 72 O ? O HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 132.8 ? 73 O ? O HOH . ? B HOH 267 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 85.3 ? 74 O ? O HOH . ? B HOH 285 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 163.8 ? 75 O ? O HOH . ? B HOH 296 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 83.4 ? 76 OP2 ? B U 23 ? B U 23 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 328 ? 1_555 91.6 ? 77 O ? O HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 328 ? 1_555 76.2 ? 78 O ? O HOH . ? B HOH 267 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 328 ? 1_555 95.4 ? 79 O ? O HOH . ? B HOH 285 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 328 ? 1_555 89.4 ? 80 O ? O HOH . ? B HOH 296 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 328 ? 1_555 170.0 ? 81 O ? O HOH . ? B HOH 305 ? 1_555 MG ? K MG . ? B MG 104 ? 1_555 O ? O HOH . ? B HOH 328 ? 1_555 86.8 ? 82 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O2 ? B U 23 ? B U 23 ? 1_555 96.3 ? 83 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 228 ? 1_555 92.6 ? 84 O2 ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 228 ? 1_555 85.9 ? 85 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 294 ? 1_555 159.3 ? 86 O2 ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 294 ? 1_555 93.3 ? 87 O ? O HOH . ? B HOH 228 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 294 ? 1_555 106.4 ? 88 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 300 ? 1_555 79.2 ? 89 O2 ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 300 ? 1_555 88.1 ? 90 O ? O HOH . ? B HOH 228 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 300 ? 1_555 169.3 ? 91 O ? O HOH . ? B HOH 294 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 300 ? 1_555 82.8 ? 92 "O2'" ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 327 ? 1_555 80.7 ? 93 O2 ? B U 23 ? B U 23 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 327 ? 1_555 173.7 ? 94 O ? O HOH . ? B HOH 228 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 327 ? 1_555 88.6 ? 95 O ? O HOH . ? B HOH 294 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 327 ? 1_555 91.2 ? 96 O ? O HOH . ? B HOH 300 ? 1_555 NA ? L NA . ? B NA 105 ? 1_555 O ? O HOH . ? B HOH 327 ? 1_555 96.8 ? 97 O ? O HOH . ? B HOH 218 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 229 ? 1_555 95.4 ? 98 O ? O HOH . ? B HOH 218 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 251 ? 1_555 90.2 ? 99 O ? O HOH . ? B HOH 229 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 251 ? 1_555 174.3 ? 100 O ? O HOH . ? B HOH 218 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 260 ? 1_555 174.5 ? 101 O ? O HOH . ? B HOH 229 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 260 ? 1_555 88.2 ? 102 O ? O HOH . ? B HOH 251 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 260 ? 1_555 86.1 ? 103 O ? O HOH . ? B HOH 218 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 281 ? 1_555 90.8 ? 104 O ? O HOH . ? B HOH 229 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 281 ? 1_555 87.0 ? 105 O ? O HOH . ? B HOH 251 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 281 ? 1_555 91.7 ? 106 O ? O HOH . ? B HOH 260 ? 1_555 MG ? I MG . ? B MG 102 ? 1_555 O ? O HOH . ? B HOH 281 ? 1_555 85.2 ? 107 O ? O HOH . ? B HOH 297 ? 1_655 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 304 ? 1_555 90.7 ? 108 O ? O HOH . ? B HOH 297 ? 1_655 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 161.2 ? 109 O ? O HOH . ? B HOH 304 ? 1_555 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 305 ? 1_555 75.2 ? 110 O ? O HOH . ? B HOH 297 ? 1_655 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 315 ? 1_555 81.1 ? 111 O ? O HOH . ? B HOH 304 ? 1_555 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 315 ? 1_555 85.9 ? 112 O ? O HOH . ? B HOH 305 ? 1_555 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 315 ? 1_555 85.5 ? 113 O ? O HOH . ? B HOH 297 ? 1_655 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 346 ? 1_655 93.9 ? 114 O ? O HOH . ? B HOH 304 ? 1_555 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 346 ? 1_655 85.6 ? 115 O ? O HOH . ? B HOH 305 ? 1_555 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 346 ? 1_655 97.3 ? 116 O ? O HOH . ? B HOH 315 ? 1_555 MG ? J MG . ? B MG 103 ? 1_555 O ? O HOH . ? B HOH 346 ? 1_655 170.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-11-30 2 'Structure model' 1 1 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 8D2B _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 205 ? ? O B HOH 231 ? ? 2.03 2 1 O B HOH 306 ? ? O B HOH 324 ? ? 2.13 3 1 O B HOH 331 ? ? O B HOH 357 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A U 24 ? ? "C1'" A U 24 ? ? N1 A U 24 ? ? 112.77 108.50 4.27 0.70 N 2 1 "O4'" B U 24 ? ? "C1'" B U 24 ? ? N1 B U 24 ? ? 112.71 108.50 4.21 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 NA NA NA N N 115 QAX C10 C N N 116 QAX C13 C N N 117 QAX C15 C Y N 118 QAX C20 C Y N 119 QAX C22 C Y N 120 QAX C01 C N N 121 QAX C03 C Y N 122 QAX C04 C Y N 123 QAX C06 C N N 124 QAX C07 C N N 125 QAX C08 C N N 126 QAX C11 C N N 127 QAX C12 C N N 128 QAX C14 C N N 129 QAX C16 C Y N 130 QAX C18 C Y N 131 QAX C23 C Y N 132 QAX N09 N N N 133 QAX N17 N Y N 134 QAX N19 N Y N 135 QAX O02 O N N 136 QAX O05 O N N 137 QAX O21 O N N 138 QAX H102 H N N 139 QAX H101 H N N 140 QAX H132 H N N 141 QAX H131 H N N 142 QAX H151 H N N 143 QAX H012 H N N 144 QAX H011 H N N 145 QAX H013 H N N 146 QAX H061 H N N 147 QAX H062 H N N 148 QAX H071 H N N 149 QAX H072 H N N 150 QAX H081 H N N 151 QAX H082 H N N 152 QAX H111 H N N 153 QAX H112 H N N 154 QAX H122 H N N 155 QAX H121 H N N 156 QAX H142 H N N 157 QAX H141 H N N 158 QAX H181 H N N 159 QAX H231 H N N 160 QAX H211 H N N 161 U OP3 O N N 162 U P P N N 163 U OP1 O N N 164 U OP2 O N N 165 U "O5'" O N N 166 U "C5'" C N N 167 U "C4'" C N R 168 U "O4'" O N N 169 U "C3'" C N S 170 U "O3'" O N N 171 U "C2'" C N R 172 U "O2'" O N N 173 U "C1'" C N R 174 U N1 N N N 175 U C2 C N N 176 U O2 O N N 177 U N3 N N N 178 U C4 C N N 179 U O4 O N N 180 U C5 C N N 181 U C6 C N N 182 U HOP3 H N N 183 U HOP2 H N N 184 U "H5'" H N N 185 U "H5''" H N N 186 U "H4'" H N N 187 U "H3'" H N N 188 U "HO3'" H N N 189 U "H2'" H N N 190 U "HO2'" H N N 191 U "H1'" H N N 192 U H3 H N N 193 U H5 H N N 194 U H6 H N N 195 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 QAX C13 C12 sing N N 118 QAX C13 C14 sing N N 119 QAX C12 C11 sing N N 120 QAX C11 C10 sing N N 121 QAX C01 O02 sing N N 122 QAX C14 N09 sing N N 123 QAX O02 C03 sing N N 124 QAX N09 C10 sing N N 125 QAX N09 C08 sing N N 126 QAX C03 C23 doub Y N 127 QAX C03 C04 sing Y N 128 QAX C07 C06 sing N N 129 QAX C07 C08 sing N N 130 QAX C23 C22 sing Y N 131 QAX O05 C06 sing N N 132 QAX O05 C04 sing N N 133 QAX C04 C15 doub Y N 134 QAX O21 C20 sing N N 135 QAX C22 C20 sing Y N 136 QAX C22 C16 doub Y N 137 QAX C20 N19 doub Y N 138 QAX C15 C16 sing Y N 139 QAX C16 N17 sing Y N 140 QAX N19 C18 sing Y N 141 QAX N17 C18 doub Y N 142 QAX C10 H102 sing N N 143 QAX C10 H101 sing N N 144 QAX C13 H132 sing N N 145 QAX C13 H131 sing N N 146 QAX C15 H151 sing N N 147 QAX C01 H012 sing N N 148 QAX C01 H011 sing N N 149 QAX C01 H013 sing N N 150 QAX C06 H061 sing N N 151 QAX C06 H062 sing N N 152 QAX C07 H071 sing N N 153 QAX C07 H072 sing N N 154 QAX C08 H081 sing N N 155 QAX C08 H082 sing N N 156 QAX C11 H111 sing N N 157 QAX C11 H112 sing N N 158 QAX C12 H122 sing N N 159 QAX C12 H121 sing N N 160 QAX C14 H142 sing N N 161 QAX C14 H141 sing N N 162 QAX C18 H181 sing N N 163 QAX C23 H231 sing N N 164 QAX O21 H211 sing N N 165 U OP3 P sing N N 166 U OP3 HOP3 sing N N 167 U P OP1 doub N N 168 U P OP2 sing N N 169 U P "O5'" sing N N 170 U OP2 HOP2 sing N N 171 U "O5'" "C5'" sing N N 172 U "C5'" "C4'" sing N N 173 U "C5'" "H5'" sing N N 174 U "C5'" "H5''" sing N N 175 U "C4'" "O4'" sing N N 176 U "C4'" "C3'" sing N N 177 U "C4'" "H4'" sing N N 178 U "O4'" "C1'" sing N N 179 U "C3'" "O3'" sing N N 180 U "C3'" "C2'" sing N N 181 U "C3'" "H3'" sing N N 182 U "O3'" "HO3'" sing N N 183 U "C2'" "O2'" sing N N 184 U "C2'" "C1'" sing N N 185 U "C2'" "H2'" sing N N 186 U "O2'" "HO2'" sing N N 187 U "C1'" N1 sing N N 188 U "C1'" "H1'" sing N N 189 U N1 C2 sing N N 190 U N1 C6 sing N N 191 U C2 O2 doub N N 192 U C2 N3 sing N N 193 U N3 C4 sing N N 194 U N3 H3 sing N N 195 U C4 O4 doub N N 196 U C4 C5 sing N N 197 U C5 C6 doub N N 198 U C5 H5 sing N N 199 U C6 H6 sing N N 200 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8D2B 'double helix' 8D2B 'a-form double helix' 8D2B tetraloop 8D2B 'bulge loop' 8D2B 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 33 1_555 -0.258 -0.117 0.059 -5.428 -13.603 1.020 1 A_G1:C33_A A 1 ? A 33 ? 19 1 1 A G 2 1_555 A C 32 1_555 -0.216 -0.159 -0.116 -9.038 -12.687 -1.128 2 A_G2:C32_A A 2 ? A 32 ? 19 1 1 A C 3 1_555 A G 31 1_555 0.249 -0.204 0.185 -5.658 -11.588 -0.816 3 A_C3:G31_A A 3 ? A 31 ? 19 1 1 A G 4 1_555 A C 30 1_555 -0.064 -0.089 0.063 -8.295 -14.660 -0.952 4 A_G4:C30_A A 4 ? A 30 ? 19 1 1 A A 5 1_555 A G 29 1_555 0.029 1.399 -0.466 -3.618 -16.950 -10.232 5 A_A5:G29_A A 5 ? A 29 ? 8 1 1 A U 23 1_555 A A 28 1_555 -0.563 3.553 0.069 -3.103 -0.851 -68.169 6 A_U23:A28_A A 23 ? A 28 ? 23 3 1 A C 8 1_555 A G 26 1_555 0.028 -0.162 0.014 1.813 -2.276 -0.743 7 A_C8:G26_A A 8 ? A 26 ? 19 1 1 A C 9 1_555 A G 25 1_555 0.307 -0.250 -0.082 11.992 -16.057 0.041 8 A_C9:G25_A A 9 ? A 25 ? 19 1 1 A A 10 1_555 A C 21 1_555 -4.060 -0.807 0.896 12.651 -1.679 -13.456 9 A_A10:C21_A A 10 ? A 21 ? ? 1 1 A G 11 1_555 A C 20 1_555 -0.306 -0.263 0.546 13.254 -14.577 -1.483 10 A_G11:C20_A A 11 ? A 20 ? 19 1 1 A C 12 1_555 A G 19 1_555 0.434 -0.106 -0.167 6.978 -16.074 0.707 11 A_C12:G19_A A 12 ? A 19 ? 19 1 1 A C 13 1_555 A G 18 1_555 0.226 -0.003 -0.082 -2.437 5.882 1.808 12 A_C13:G18_A A 13 ? A 18 ? 19 1 1 A G 14 1_555 A A 17 1_555 6.841 -5.129 1.058 20.207 8.626 -8.840 13 A_G14:A17_A A 14 ? A 17 ? ? ? 1 B G 1 1_555 B C 33 1_555 -0.295 -0.143 -0.013 -5.445 -6.638 -1.366 14 B_G1:C33_B B 1 ? B 33 ? 19 1 1 B G 2 1_555 B C 32 1_555 -0.163 -0.184 -0.077 -9.040 -12.092 -0.098 15 B_G2:C32_B B 2 ? B 32 ? 19 1 1 B C 3 1_555 B G 31 1_555 0.180 -0.187 0.087 -4.490 -11.531 -0.193 16 B_C3:G31_B B 3 ? B 31 ? 19 1 1 B G 4 1_555 B C 30 1_555 -0.081 -0.103 0.123 -7.058 -15.987 -0.839 17 B_G4:C30_B B 4 ? B 30 ? 19 1 1 B A 5 1_555 B G 29 1_555 -0.004 1.431 -0.396 -4.183 -15.237 -11.423 18 B_A5:G29_B B 5 ? B 29 ? 8 1 1 B U 23 1_555 B A 28 1_555 -0.580 3.581 0.131 -3.091 0.908 -67.849 19 B_U23:A28_B B 23 ? B 28 ? 23 3 1 B C 8 1_555 B G 26 1_555 0.209 -0.100 0.143 0.270 -2.794 0.137 20 B_C8:G26_B B 8 ? B 26 ? 19 1 1 B C 9 1_555 B G 25 1_555 0.237 -0.126 0.077 10.339 -18.615 1.064 21 B_C9:G25_B B 9 ? B 25 ? 19 1 1 B A 10 1_555 B C 21 1_555 -4.208 -0.723 0.868 10.089 -0.905 -12.497 22 B_A10:C21_B B 10 ? B 21 ? ? 1 1 B G 11 1_555 B C 20 1_555 -0.159 -0.137 0.263 12.762 -12.171 -1.240 23 B_G11:C20_B B 11 ? B 20 ? 19 1 1 B C 12 1_555 B G 19 1_555 0.112 -0.146 -0.283 5.975 -15.554 -1.697 24 B_C12:G19_B B 12 ? B 19 ? 19 1 1 B C 13 1_555 B G 18 1_555 0.372 -0.153 -0.182 2.430 2.466 -0.621 25 B_C13:G18_B B 13 ? B 18 ? 19 1 1 B G 14 1_555 B A 17 1_555 6.793 -5.105 0.793 18.340 7.491 -12.071 26 B_G14:A17_B B 14 ? B 17 ? 11 10 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 33 1_555 A G 2 1_555 A C 32 1_555 -1.015 -1.757 3.219 -2.622 6.279 34.996 -3.738 1.296 2.936 10.321 4.310 35.631 1 AA_G1G2:C32C33_AA A 1 ? A 33 ? A 2 ? A 32 ? 1 A G 2 1_555 A C 32 1_555 A C 3 1_555 A G 31 1_555 0.066 -1.350 3.207 -1.429 5.330 33.482 -3.126 -0.330 2.958 9.174 2.460 33.921 2 AA_G2C3:G31C32_AA A 2 ? A 32 ? A 3 ? A 31 ? 1 A C 3 1_555 A G 31 1_555 A G 4 1_555 A C 30 1_555 0.823 -1.806 3.174 4.907 11.803 32.427 -4.635 -0.705 2.481 20.184 -8.392 34.793 3 AA_C3G4:C30G31_AA A 3 ? A 31 ? A 4 ? A 30 ? 1 A G 4 1_555 A C 30 1_555 A A 5 1_555 A G 29 1_555 -0.812 -1.274 3.172 4.195 5.057 30.911 -3.206 2.210 2.801 9.356 -7.761 31.585 4 AA_G4A5:G29C30_AA A 4 ? A 30 ? A 5 ? A 29 ? 1 A A 5 1_555 A G 29 1_555 A U 23 1_555 A A 28 1_555 0.940 -4.137 2.312 -112.305 -125.501 143.804 -1.758 -0.749 2.958 -62.963 56.343 176.406 5 AA_A5U23:A28G29_AA A 5 ? A 29 ? A 23 ? A 28 ? 1 A U 23 1_555 A A 28 1_555 A C 8 1_555 A G 26 1_555 -3.943 5.608 0.473 -166.018 -47.729 -78.806 -2.870 -1.757 -1.429 24.230 -84.281 -174.394 6 AA_U23C8:G26A28_AA A 23 ? A 28 ? A 8 ? A 26 ? 1 A C 8 1_555 A G 26 1_555 A C 9 1_555 A G 25 1_555 0.407 -0.989 2.972 0.192 10.245 36.490 -2.670 -0.605 2.612 15.978 -0.300 37.855 7 AA_C8C9:G25G26_AA A 8 ? A 26 ? A 9 ? A 25 ? 1 A C 9 1_555 A G 25 1_555 A A 10 1_555 A C 21 1_555 2.890 -1.404 2.698 -5.329 2.144 42.974 -2.060 -4.309 2.272 2.911 7.235 43.339 8 AA_C9A10:C21G25_AA A 9 ? A 25 ? A 10 ? A 21 ? 1 A A 10 1_555 A C 21 1_555 A G 11 1_555 A C 20 1_555 0.453 -1.217 3.282 -3.229 6.258 48.182 -1.945 -0.792 3.076 7.618 3.931 48.663 9 AA_A10G11:C20C21_AA A 10 ? A 21 ? A 11 ? A 20 ? 1 A G 11 1_555 A C 20 1_555 A C 12 1_555 A G 19 1_555 0.003 -1.533 3.365 2.594 5.691 38.201 -3.010 0.313 3.107 8.626 -3.931 38.691 10 AA_G11C12:G19C20_AA A 11 ? A 20 ? A 12 ? A 19 ? 1 A C 12 1_555 A G 19 1_555 A C 13 1_555 A G 18 1_555 -0.053 -1.851 3.474 -0.162 9.785 31.676 -4.865 0.066 2.794 17.414 0.288 33.117 11 AA_C12C13:G18G19_AA A 12 ? A 19 ? A 13 ? A 18 ? 1 A C 13 1_555 A G 18 1_555 A G 14 1_555 A A 17 1_555 -1.784 -1.021 2.551 -4.889 8.944 52.655 -1.572 1.740 2.503 9.977 5.453 53.564 12 AA_C13G14:A17G18_AA A 13 ? A 18 ? A 14 ? A 17 ? 1 B G 1 1_555 B C 33 1_555 B G 2 1_555 B C 32 1_555 -0.557 -1.927 3.292 -0.795 6.500 33.705 -4.239 0.825 2.894 11.081 1.355 34.317 13 BB_G1G2:C32C33_BB B 1 ? B 33 ? B 2 ? B 32 ? 1 B G 2 1_555 B C 32 1_555 B C 3 1_555 B G 31 1_555 -0.151 -1.221 3.174 -1.168 6.988 32.576 -3.215 0.082 2.861 12.277 2.051 33.317 14 BB_G2C3:G31C32_BB B 2 ? B 32 ? B 3 ? B 31 ? 1 B C 3 1_555 B G 31 1_555 B G 4 1_555 B C 30 1_555 0.836 -1.765 3.129 3.979 13.256 32.326 -4.658 -0.867 2.333 22.562 -6.772 35.092 15 BB_C3G4:C30G31_BB B 3 ? B 31 ? B 4 ? B 30 ? 1 B G 4 1_555 B C 30 1_555 B A 5 1_555 B G 29 1_555 -0.923 -1.385 3.131 4.168 4.374 31.202 -3.261 2.383 2.773 8.038 -7.658 31.767 16 BB_G4A5:G29C30_BB B 4 ? B 30 ? B 5 ? B 29 ? 1 B A 5 1_555 B G 29 1_555 B U 23 1_555 B A 28 1_555 0.797 -4.036 2.456 -112.817 -128.539 147.930 -1.728 -0.654 3.052 -64.400 56.523 177.523 17 BB_A5U23:A28G29_BB B 5 ? B 29 ? B 23 ? B 28 ? 1 B U 23 1_555 B A 28 1_555 B C 8 1_555 B G 26 1_555 -3.703 5.707 1.278 -167.412 -50.446 -51.824 -2.844 -1.891 -1.149 25.641 -85.094 -175.365 18 BB_U23C8:G26A28_BB B 23 ? B 28 ? B 8 ? B 26 ? 1 B C 8 1_555 B G 26 1_555 B C 9 1_555 B G 25 1_555 0.404 -0.868 2.941 1.163 10.363 36.364 -2.499 -0.495 2.617 16.200 -1.819 37.781 19 BB_C8C9:G25G26_BB B 8 ? B 26 ? B 9 ? B 25 ? 1 B C 9 1_555 B G 25 1_555 B A 10 1_555 B C 21 1_555 3.108 -1.415 2.683 -2.292 3.270 38.361 -2.457 -4.927 2.376 4.960 3.477 38.560 20 BB_C9A10:C21G25_BB B 9 ? B 25 ? B 10 ? B 21 ? 1 B A 10 1_555 B C 21 1_555 B G 11 1_555 B C 20 1_555 0.337 -1.357 3.306 -4.101 7.522 47.464 -2.236 -0.726 3.033 9.257 5.046 48.187 21 BB_A10G11:C20C21_BB B 10 ? B 21 ? B 11 ? B 20 ? 1 B G 11 1_555 B C 20 1_555 B C 12 1_555 B G 19 1_555 -0.261 -1.716 3.374 1.480 5.119 36.546 -3.398 0.610 3.101 8.109 -2.345 36.920 22 BB_G11C12:G19C20_BB B 11 ? B 20 ? B 12 ? B 19 ? 1 B C 12 1_555 B G 19 1_555 B C 13 1_555 B G 18 1_555 0.339 -1.807 3.382 0.590 7.907 34.829 -4.066 -0.470 2.920 13.002 -0.970 35.693 23 BB_C12C13:G18G19_BB B 12 ? B 19 ? B 13 ? B 18 ? 1 B C 13 1_555 B G 18 1_555 B G 14 1_555 B A 17 1_555 -1.540 -1.186 2.851 -3.689 8.693 51.643 -1.833 1.535 2.729 9.884 4.194 52.441 24 BB_C13G14:A17G18_BB B 13 ? B 18 ? B 14 ? B 17 ? # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id QAX _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id QAX _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '6-methoxy-7-[3-(piperidin-1-yl)propoxy]quinazolin-4-ol' QAX 3 'MAGNESIUM ION' MG 4 'SODIUM ION' NA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1O15 _pdbx_initial_refinement_model.details 'PDB entry 1O15' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'surface plasmon resonance' _pdbx_struct_assembly_auth_evidence.details ? #