HEADER TRANSFERASE 04-JUN-22 8D5H TITLE CRYSTAL STRUCTURE OF DIHYDROPTEROATE SYNTHASE (FOLP-SMZ_B27) FROM SOIL TITLE 2 UNCULTURED BACTERIUM IN COMPLEX WITH 6-HYDROXYMETHYL-7,8- TITLE 3 DIHYDROPTERIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOLP-SMZ_B27; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 GENE: FOLP-SMZ_B27; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: -GOLD; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, DIHYDROPTEROATE SYNTHASE, HYDROLASE, KEYWDS 3 OXIDOREDUCTASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,T.SKARINA,J.OSIPIUK,R.DI LEO,A.SAVCHENKO,A.JOACHIMIAK, AUTHOR 2 K.J.F.SATCHELL,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 2 18-OCT-23 8D5H 1 REMARK REVDAT 1 15-JUN-22 8D5H 0 JRNL AUTH P.J.STOGIOS JRNL TITL CRYSTAL STRUCTURE OF DIHYDROPTEROATE SYNTHASE (FOLP-SMZ_B27) JRNL TITL 2 FROM SOIL UNCULTURED BACTERIUM IN COMPLEX WITH JRNL TITL 3 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 66196 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.950 REMARK 3 FREE R VALUE TEST SET COUNT : 1951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.8500 - 4.1400 0.99 5089 155 0.1564 0.1694 REMARK 3 2 4.1400 - 3.2900 1.00 4813 147 0.1267 0.1413 REMARK 3 3 3.2900 - 2.8700 1.00 4774 142 0.1501 0.1932 REMARK 3 4 2.8700 - 2.6100 0.99 4700 144 0.1539 0.1931 REMARK 3 5 2.6100 - 2.4200 0.99 4650 142 0.1524 0.2074 REMARK 3 6 2.4200 - 2.2800 0.99 4656 141 0.1484 0.1918 REMARK 3 7 2.2800 - 2.1700 0.99 4616 138 0.1469 0.1801 REMARK 3 8 2.1700 - 2.0700 0.98 4584 139 0.1563 0.1719 REMARK 3 9 2.0700 - 1.9900 0.98 4543 141 0.1618 0.2078 REMARK 3 10 1.9900 - 1.9200 0.97 4492 135 0.1609 0.2016 REMARK 3 11 1.9200 - 1.8600 0.96 4469 136 0.1623 0.2016 REMARK 3 12 1.8600 - 1.8100 0.94 4372 134 0.1855 0.2067 REMARK 3 13 1.8100 - 1.7600 0.93 4309 129 0.2283 0.2496 REMARK 3 14 1.7600 - 1.7200 0.90 4178 128 0.2742 0.3068 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.182 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.148 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4269 REMARK 3 ANGLE : 1.197 5781 REMARK 3 CHIRALITY : 0.084 668 REMARK 3 PLANARITY : 0.012 751 REMARK 3 DIHEDRAL : 14.075 1579 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.6303 22.2079 17.3477 REMARK 3 T TENSOR REMARK 3 T11: 0.2431 T22: 0.2223 REMARK 3 T33: 0.1913 T12: -0.0074 REMARK 3 T13: -0.0042 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 6.0729 L22: 8.6769 REMARK 3 L33: 5.2648 L12: 5.4669 REMARK 3 L13: -3.4445 L23: -3.8963 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: -0.3688 S13: -0.3346 REMARK 3 S21: 0.0885 S22: -0.0556 S23: 0.0104 REMARK 3 S31: 0.5670 S32: -0.1671 S33: 0.0489 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0521 10.8546 20.7784 REMARK 3 T TENSOR REMARK 3 T11: 0.6852 T22: 0.2879 REMARK 3 T33: 0.3958 T12: -0.0067 REMARK 3 T13: 0.1904 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 7.3805 L22: 2.9807 REMARK 3 L33: 4.7210 L12: 4.2593 REMARK 3 L13: -5.4419 L23: -3.5166 REMARK 3 S TENSOR REMARK 3 S11: -0.8237 S12: 0.0883 S13: -0.7311 REMARK 3 S21: 0.2375 S22: 0.1510 S23: 0.5377 REMARK 3 S31: 1.6023 S32: -0.4585 S33: 0.4666 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4026 31.2869 18.0431 REMARK 3 T TENSOR REMARK 3 T11: 0.1416 T22: 0.1346 REMARK 3 T33: 0.1181 T12: 0.0047 REMARK 3 T13: 0.0200 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.1401 L22: 1.3551 REMARK 3 L33: 2.0299 L12: -0.4786 REMARK 3 L13: 0.4310 L23: -0.9775 REMARK 3 S TENSOR REMARK 3 S11: -0.0509 S12: -0.1773 S13: -0.0467 REMARK 3 S21: 0.2001 S22: 0.0608 S23: 0.0612 REMARK 3 S31: -0.0093 S32: -0.1154 S33: -0.0110 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1739 27.5688 5.5940 REMARK 3 T TENSOR REMARK 3 T11: 0.1199 T22: 0.1002 REMARK 3 T33: 0.0857 T12: 0.0039 REMARK 3 T13: 0.0161 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 1.7028 L22: 2.5856 REMARK 3 L33: 3.1780 L12: 0.3035 REMARK 3 L13: -0.7153 L23: 0.9156 REMARK 3 S TENSOR REMARK 3 S11: -0.1489 S12: 0.0502 S13: -0.0774 REMARK 3 S21: -0.0361 S22: 0.0300 S23: 0.0129 REMARK 3 S31: 0.2360 S32: -0.0332 S33: 0.1139 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 271 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7038 41.0619 8.1173 REMARK 3 T TENSOR REMARK 3 T11: 1.2041 T22: 1.2784 REMARK 3 T33: 0.7040 T12: 0.1396 REMARK 3 T13: -0.3897 T23: -0.3145 REMARK 3 L TENSOR REMARK 3 L11: 0.6550 L22: 1.2160 REMARK 3 L33: 3.6288 L12: -0.8864 REMARK 3 L13: -1.5086 L23: 2.0862 REMARK 3 S TENSOR REMARK 3 S11: -0.9922 S12: -0.7150 S13: 0.8678 REMARK 3 S21: 3.8612 S22: 1.1200 S23: -2.5408 REMARK 3 S31: 0.9514 S32: 1.3487 S33: -0.1202 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2697 10.7392 -17.1875 REMARK 3 T TENSOR REMARK 3 T11: 0.3134 T22: 0.3172 REMARK 3 T33: 0.3719 T12: -0.1061 REMARK 3 T13: -0.0183 T23: -0.0295 REMARK 3 L TENSOR REMARK 3 L11: 3.4274 L22: 6.7261 REMARK 3 L33: 3.8412 L12: 3.9702 REMARK 3 L13: -1.4207 L23: -1.4473 REMARK 3 S TENSOR REMARK 3 S11: -0.0472 S12: 0.0691 S13: 0.2842 REMARK 3 S21: -0.1219 S22: 0.0925 S23: -0.4487 REMARK 3 S31: -0.4484 S32: 0.6067 S33: 0.0416 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 22 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5631 8.0060 -21.0378 REMARK 3 T TENSOR REMARK 3 T11: 0.3272 T22: 0.5033 REMARK 3 T33: 0.4992 T12: -0.0712 REMARK 3 T13: 0.0100 T23: 0.1384 REMARK 3 L TENSOR REMARK 3 L11: 7.9371 L22: 3.6863 REMARK 3 L33: 9.0952 L12: 5.0044 REMARK 3 L13: -5.0524 L23: -4.6892 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0375 S13: 0.6054 REMARK 3 S21: -0.0610 S22: -0.5699 S23: -0.9755 REMARK 3 S31: -0.7158 S32: 1.2847 S33: 0.4866 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 40 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.0603 17.6633 -16.7303 REMARK 3 T TENSOR REMARK 3 T11: 0.3202 T22: 0.2695 REMARK 3 T33: 0.2317 T12: -0.1220 REMARK 3 T13: 0.0315 T23: -0.0637 REMARK 3 L TENSOR REMARK 3 L11: 1.6826 L22: 0.6149 REMARK 3 L33: 1.9330 L12: -1.0062 REMARK 3 L13: -0.0670 L23: 0.2060 REMARK 3 S TENSOR REMARK 3 S11: 0.1430 S12: -0.3194 S13: 0.4005 REMARK 3 S21: 0.2403 S22: -0.0317 S23: -0.2936 REMARK 3 S31: -0.4348 S32: 0.2738 S33: -0.0964 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 60 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5595 15.4662 -27.7894 REMARK 3 T TENSOR REMARK 3 T11: 0.3869 T22: 0.2980 REMARK 3 T33: 0.1602 T12: -0.0622 REMARK 3 T13: 0.0327 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 2.5899 L22: 3.2968 REMARK 3 L33: 1.6361 L12: -2.0727 REMARK 3 L13: -0.6946 L23: 1.4913 REMARK 3 S TENSOR REMARK 3 S11: 0.2745 S12: 0.3406 S13: 0.2106 REMARK 3 S21: -0.5870 S22: -0.1544 S23: -0.2220 REMARK 3 S31: -0.3635 S32: 0.0620 S33: -0.1056 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.9798 21.0151 -16.2972 REMARK 3 T TENSOR REMARK 3 T11: 0.2520 T22: 0.1480 REMARK 3 T33: 0.1737 T12: 0.0006 REMARK 3 T13: -0.0722 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 2.0584 L22: 1.1183 REMARK 3 L33: 3.4466 L12: -0.1983 REMARK 3 L13: -0.7447 L23: 0.1825 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: 0.2885 S13: 0.1614 REMARK 3 S21: -0.3927 S22: -0.0434 S23: 0.1714 REMARK 3 S31: -0.3173 S32: -0.0864 S33: 0.0395 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.6514 15.4905 -10.4152 REMARK 3 T TENSOR REMARK 3 T11: 0.1434 T22: 0.1644 REMARK 3 T33: 0.2084 T12: 0.0047 REMARK 3 T13: -0.0519 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 2.1396 L22: 1.3082 REMARK 3 L33: 4.5077 L12: -0.0035 REMARK 3 L13: 0.4939 L23: -0.0395 REMARK 3 S TENSOR REMARK 3 S11: -0.0804 S12: 0.2076 S13: -0.0048 REMARK 3 S21: -0.2198 S22: -0.0457 S23: 0.3253 REMARK 3 S31: 0.0077 S32: -0.3802 S33: 0.1049 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.1066 8.1757 -4.3615 REMARK 3 T TENSOR REMARK 3 T11: 0.1510 T22: 0.0799 REMARK 3 T33: 0.1179 T12: -0.0024 REMARK 3 T13: 0.0014 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 4.0990 L22: 1.8912 REMARK 3 L33: 3.0943 L12: 0.0419 REMARK 3 L13: 1.8573 L23: -0.2635 REMARK 3 S TENSOR REMARK 3 S11: -0.0807 S12: 0.0193 S13: 0.0294 REMARK 3 S21: 0.0183 S22: 0.0108 S23: 0.0321 REMARK 3 S31: -0.0556 S32: -0.0499 S33: 0.0872 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 253 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.9942 -7.2472 -8.1062 REMARK 3 T TENSOR REMARK 3 T11: 0.2114 T22: 0.1139 REMARK 3 T33: 0.1668 T12: -0.0156 REMARK 3 T13: -0.0086 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 7.1502 L22: 4.0038 REMARK 3 L33: 4.6712 L12: 2.3650 REMARK 3 L13: -1.4896 L23: -1.7317 REMARK 3 S TENSOR REMARK 3 S11: -0.1856 S12: 0.3282 S13: -0.6031 REMARK 3 S21: -0.2264 S22: 0.1908 S23: 0.0956 REMARK 3 S31: 0.3693 S32: -0.2819 S33: -0.0904 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8D5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000264671. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68078 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 30.50 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 27.80 REMARK 200 R MERGE FOR SHELL (I) : 1.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5VIS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) PEG 5K MME, 0.2 M AMMONIUM REMARK 280 SULFATE, 0.1 M SODIUM CITRATE PH 5.6, 1 MM 6-HYDROXYMETHYL-7,8- REMARK 280 DIHYDROPTERIN PYROPHOSPHATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.07067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 138.14133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 69.07067 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 138.14133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.07067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 138.14133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 69.07067 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 138.14133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 306 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 760 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 421 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 727 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A -1 REMARK 465 PRO A 14 REMARK 465 ASN A 15 REMARK 465 SER A 16 REMARK 465 PHE A 17 REMARK 465 HIS A 18 REMARK 465 ASP A 19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 122 48.84 -88.18 REMARK 500 ASP A 148 86.76 -158.53 REMARK 500 SER A 185 145.83 -174.33 REMARK 500 SER A 213 60.53 29.16 REMARK 500 ASP A 252 67.37 -109.02 REMARK 500 SER B 16 130.20 -170.13 REMARK 500 SER B 185 148.19 -173.51 REMARK 500 SER B 213 61.73 35.22 REMARK 500 SER B 213 63.58 32.84 REMARK 500 ASP B 252 71.46 -116.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 751 DISTANCE = 5.83 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 301 REMARK 610 PEG B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP95756 RELATED DB: TARGETTRACK DBREF 8D5H A -1 272 PDB 8D5H 8D5H -1 272 DBREF 8D5H B -1 272 PDB 8D5H 8D5H -1 272 SEQRES 1 A 274 GLN GLY MET ALA LYS VAL LYS ILE VAL GLY ILE LEU ASN SEQRES 2 A 274 VAL THR PRO ASN SER PHE HIS ASP GLY GLY ARG PHE VAL SEQRES 3 A 274 GLU THR ASP LYS ALA VAL VAL ARG ALA ARG GLU LEU LEU SEQRES 4 A 274 SER GLN GLY ALA ASP ILE ILE GLU ILE GLY GLY GLU SER SEQRES 5 A 274 THR GLY PRO GLY SER ASN THR ILE THR ALA ASP GLU GLU SEQRES 6 A 274 LEU ALA ARG ILE VAL PRO VAL ILE ARG ALA ILE ARG SER SEQRES 7 A 274 SER LEU PRO ASP ALA ASN ILE ALA VAL ASP THR TYR LYS SEQRES 8 A 274 ALA GLU VAL ALA ARG LYS ALA LEU GLU LEU GLY ALA THR SEQRES 9 A 274 MET ILE ASN ASP VAL SER ALA GLY ARG ALA ASP PRO LYS SEQRES 10 A 274 LEU PHE GLY VAL VAL ALA ARG SER ASN ALA GLN ILE VAL SEQRES 11 A 274 LEU MET TYR SER LYS ASP THR ASP PRO HIS THR SER PHE SEQRES 12 A 274 ASP GLU ARG GLN TYR VAL ASP VAL VAL ARG THR VAL TYR SEQRES 13 A 274 ASP PHE LEU ALA GLU ARG LYS LYS ALA ALA MET SER ALA SEQRES 14 A 274 GLY ILE PRO ALA ASP ARG ILE ILE LEU ASP THR GLY LEU SEQRES 15 A 274 GLY HIS PHE VAL SER SER ASP PRO GLN TYR SER PHE GLN SEQRES 16 A 274 LEU LEU ALA HIS LEU SER ASP PHE GLN ASP LEU GLY CYS SEQRES 17 A 274 LYS LEU PHE LEU SER PRO SER ARG LYS SER PHE LEU ALA SEQRES 18 A 274 GLY ASN GLU LEU LEU LYS THR ALA ASP ARG LEU PRO GLY SEQRES 19 A 274 THR ILE ALA ALA SER ALA ILE ALA VAL LEU HIS GLY ALA SEQRES 20 A 274 ASP TYR ILE ARG THR HIS ASP VAL LEU GLU VAL ARG ARG SEQRES 21 A 274 GLY CYS GLU ILE ALA THR ALA ILE ASN GLN PRO PRO GLU SEQRES 22 A 274 ARG SEQRES 1 B 274 GLN GLY MET ALA LYS VAL LYS ILE VAL GLY ILE LEU ASN SEQRES 2 B 274 VAL THR PRO ASN SER PHE HIS ASP GLY GLY ARG PHE VAL SEQRES 3 B 274 GLU THR ASP LYS ALA VAL VAL ARG ALA ARG GLU LEU LEU SEQRES 4 B 274 SER GLN GLY ALA ASP ILE ILE GLU ILE GLY GLY GLU SER SEQRES 5 B 274 THR GLY PRO GLY SER ASN THR ILE THR ALA ASP GLU GLU SEQRES 6 B 274 LEU ALA ARG ILE VAL PRO VAL ILE ARG ALA ILE ARG SER SEQRES 7 B 274 SER LEU PRO ASP ALA ASN ILE ALA VAL ASP THR TYR LYS SEQRES 8 B 274 ALA GLU VAL ALA ARG LYS ALA LEU GLU LEU GLY ALA THR SEQRES 9 B 274 MET ILE ASN ASP VAL SER ALA GLY ARG ALA ASP PRO LYS SEQRES 10 B 274 LEU PHE GLY VAL VAL ALA ARG SER ASN ALA GLN ILE VAL SEQRES 11 B 274 LEU MET TYR SER LYS ASP THR ASP PRO HIS THR SER PHE SEQRES 12 B 274 ASP GLU ARG GLN TYR VAL ASP VAL VAL ARG THR VAL TYR SEQRES 13 B 274 ASP PHE LEU ALA GLU ARG LYS LYS ALA ALA MET SER ALA SEQRES 14 B 274 GLY ILE PRO ALA ASP ARG ILE ILE LEU ASP THR GLY LEU SEQRES 15 B 274 GLY HIS PHE VAL SER SER ASP PRO GLN TYR SER PHE GLN SEQRES 16 B 274 LEU LEU ALA HIS LEU SER ASP PHE GLN ASP LEU GLY CYS SEQRES 17 B 274 LYS LEU PHE LEU SER PRO SER ARG LYS SER PHE LEU ALA SEQRES 18 B 274 GLY ASN GLU LEU LEU LYS THR ALA ASP ARG LEU PRO GLY SEQRES 19 B 274 THR ILE ALA ALA SER ALA ILE ALA VAL LEU HIS GLY ALA SEQRES 20 B 274 ASP TYR ILE ARG THR HIS ASP VAL LEU GLU VAL ARG ARG SEQRES 21 B 274 GLY CYS GLU ILE ALA THR ALA ILE ASN GLN PRO PRO GLU SEQRES 22 B 274 ARG HET PEG A 301 6 HET PEG A 302 7 HET HHR A 303 14 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET CL A 307 1 HET PEG B 301 5 HET PEG B 302 7 HET PEG B 303 7 HET HHR B 304 14 HET SO4 B 305 5 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM HHR 6-HYDROXYMETHYLPTERIN HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 PEG 5(C4 H10 O3) FORMUL 5 HHR 2(C7 H7 N5 O2) FORMUL 6 SO4 4(O4 S 2-) FORMUL 9 CL CL 1- FORMUL 15 HOH *711(H2 O) HELIX 1 AA1 ARG A 22 GLN A 39 1 18 HELIX 2 AA2 THR A 59 LEU A 78 1 20 HELIX 3 AA3 LYS A 89 GLY A 100 1 12 HELIX 4 AA4 LYS A 115 ARG A 122 1 8 HELIX 5 AA5 ASP A 148 ALA A 167 1 20 HELIX 6 AA6 PRO A 170 ASP A 172 5 3 HELIX 7 AA7 LEU A 180 VAL A 184 5 5 HELIX 8 AA8 PRO A 188 HIS A 197 1 10 HELIX 9 AA9 LEU A 198 GLY A 205 5 8 HELIX 10 AB1 LYS A 215 GLY A 220 5 6 HELIX 11 AB2 LYS A 225 ASP A 228 5 4 HELIX 12 AB3 ARG A 229 HIS A 243 1 15 HELIX 13 AB4 ASP A 252 GLN A 268 1 17 HELIX 14 AB5 GLY B 21 GLN B 39 1 19 HELIX 15 AB6 THR B 59 LEU B 78 1 20 HELIX 16 AB7 LYS B 89 GLY B 100 1 12 HELIX 17 AB8 LYS B 115 ARG B 122 1 8 HELIX 18 AB9 ASP B 148 ALA B 167 1 20 HELIX 19 AC1 PRO B 170 ASP B 172 5 3 HELIX 20 AC2 LEU B 180 VAL B 184 5 5 HELIX 21 AC3 PRO B 188 HIS B 197 1 10 HELIX 22 AC4 LEU B 198 GLY B 205 5 8 HELIX 23 AC5 LYS B 215 GLY B 220 5 6 HELIX 24 AC6 LYS B 225 ASP B 228 5 4 HELIX 25 AC7 ARG B 229 HIS B 243 1 15 HELIX 26 AC8 ASP B 252 GLN B 268 1 17 SHEET 1 AA1 9 LYS A 5 ASN A 11 0 SHEET 2 AA1 9 ILE A 43 GLY A 47 1 O GLU A 45 N GLY A 8 SHEET 3 AA1 9 ASN A 82 ASP A 86 1 O ALA A 84 N ILE A 46 SHEET 4 AA1 9 MET A 103 ASP A 106 1 O ASN A 105 N VAL A 85 SHEET 5 AA1 9 GLN A 126 MET A 130 1 O VAL A 128 N ILE A 104 SHEET 6 AA1 9 ILE A 174 ASP A 177 1 O ILE A 175 N ILE A 127 SHEET 7 AA1 9 LYS A 207 LEU A 210 1 O LYS A 207 N LEU A 176 SHEET 8 AA1 9 TYR A 247 THR A 250 1 O ARG A 249 N LEU A 210 SHEET 9 AA1 9 LYS A 5 ASN A 11 1 N VAL A 7 O ILE A 248 SHEET 1 AA2 9 LYS B 5 ASN B 11 0 SHEET 2 AA2 9 ILE B 43 GLY B 47 1 O GLU B 45 N GLY B 8 SHEET 3 AA2 9 ASN B 82 ASP B 86 1 O ALA B 84 N ILE B 46 SHEET 4 AA2 9 MET B 103 ASP B 106 1 O ASN B 105 N VAL B 85 SHEET 5 AA2 9 GLN B 126 MET B 130 1 O VAL B 128 N ILE B 104 SHEET 6 AA2 9 ILE B 174 ASP B 177 1 O ILE B 175 N LEU B 129 SHEET 7 AA2 9 LYS B 207 LEU B 210 1 O LYS B 207 N LEU B 176 SHEET 8 AA2 9 TYR B 247 THR B 250 1 O ARG B 249 N LEU B 210 SHEET 9 AA2 9 LYS B 5 ASN B 11 1 N VAL B 7 O ILE B 248 CRYST1 101.781 101.781 207.212 90.00 90.00 120.00 P 64 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009825 0.005672 0.000000 0.00000 SCALE2 0.000000 0.011345 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004826 0.00000