data_8D8M # _entry.id 8D8M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8D8M pdb_00008d8m 10.2210/pdb8d8m/pdb WWPDB D_1000266198 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details '7u6k was the starting model for this structure and contains the same protein complexed to a similar DNA duplex.' _pdbx_database_related.db_id 7u6k _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8D8M _pdbx_database_status.recvd_initial_deposition_date 2022-06-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Orun, A.R.' 1 0000-0003-3090-1363 'Snow, C.D.' 2 0000-0002-7690-3519 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? ? ? ? primary 'To Be Published' ? 0353 ? ? ? ? ? ? ? 'Designed crystalline assemblies of protein and DNA enable site-specific installation of a guest protein, DNA, and small molecule.' ? ? ? ? ? ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr.,Sect.D' ABCRE6 ? 1399-0047 ? ? 68 ? 352 367 'Towards automated crystallographic structure refinement with phenix.refine.' 2012 ? 10.1107/S0907444912001308 22505256 ? ? ? ? ? ? ? ? ? ? ? ? 2 'Acta Crystallogr D Struct Biol' ? ? 2059-7983 ? ? 75 ? 861 877 'Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix.' 2019 ? 10.1107/S2059798319011471 31588918 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Orun, A.R.' 1 0000-0003-3090-1363 primary 'Shields, E.T.' 2 0000-0003-4005-5922 primary 'Dmytriw, S.' 3 0000-0001-8636-2966 primary 'Vajapayajula, A.' 4 0000-0003-0343-0594 primary 'Snow, C.D.' 5 0000-0002-7690-3519 1 'Afonine, P.V.' 6 ? 1 'Grosse-Kunstleve, R.W.' 7 ? 1 'Echols, N.' 8 ? 1 'Headd, J.J.' 9 ? 1 'Moriarty, N.W.' 10 ? 1 'Mustyakimov, M.' 11 ? 1 'Terwilliger, T.C.' 12 ? 1 'Urzhumtsev, A.' 13 ? 1 'Zwart, P.H.' 14 ? 1 'Adams, P.D.' 15 ? 2 'Liebschner, D.' 16 0000-0003-3921-3209 2 'Afonine, P.V.' 17 0000-0002-5052-991X 2 'Baker, M.L.' 18 ? 2 'Bunkoczi, G.' 19 ? 2 'Chen, V.B.' 20 ? 2 'Croll, T.I.' 21 ? 2 'Hintze, B.' 22 0000-0002-4871-2096 2 'Hung, L.W.' 23 0000-0001-6690-8458 2 'Jain, S.' 24 ? 2 'McCoy, A.J.' 25 ? 2 'Moriarty, N.W.' 26 0000-0001-8857-9464 2 'Oeffner, R.D.' 27 0000-0003-3107-2202 2 'Poon, B.K.' 28 0000-0001-9633-6067 2 'Prisant, M.G.' 29 ? 2 'Read, R.J.' 30 0000-0001-8273-0047 2 'Richardson, J.S.' 31 ? 2 'Richardson, D.C.' 32 ? 2 'Sammito, M.D.' 33 ? 2 'Sobolev, O.V.' 34 0000-0002-0623-3214 2 'Stockwell, D.H.' 35 ? 2 'Terwilliger, T.C.' 36 0000-0001-6384-0320 2 'Urzhumtsev, A.G.' 37 ? 2 'Videau, L.L.' 38 ? 2 'Williams, C.J.' 39 ? 2 'Adams, P.D.' 40 0000-0001-9333-8219 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8D8M _cell.details ? _cell.formula_units_Z ? _cell.length_a 73.322 _cell.length_a_esd ? _cell.length_b 133.189 _cell.length_b_esd ? _cell.length_c 134.645 _cell.length_c_esd ? _cell.volume 1314900.503 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8D8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(CP*CP*CP*GP*GP*AP*CP*CP*TP*GP*TP*GP*AP*CP*AP*AP*AP*TP*TP*GP*CP*CP*CP*TP*CP*AP*GP*AP*CP*GP*GP*A)-3') ; 9796.306 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(GP*CP*CP*GP*TP*CP*TP*GP*AP*GP*GP*GP*CP*AP*AP*TP*TP*TP*GP*TP*CP*AP*CP*AP*GP*GP*TP*CP*CP*GP*GP*A)-3') ; 9898.351 1 ? ? ? ? 3 polymer man 'Replication initiation protein' 30749.053 1 ? R118P ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 5 water nat water 18.015 3 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'Protein E,Protein rep,Protein F4' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DC)(DC)(DC)(DG)(DG)(DA)(DC)(DC)(DT)(DG)(DT)(DG)(DA)(DC)(DA)(DA)(DA)(DT)(DT)(DG) (DC)(DC)(DC)(DT)(DC)(DA)(DG)(DA)(DC)(DG)(DG)(DA) ; CCCGGACCTGTGACAAATTGCCCTCAGACGGA A ? 2 polydeoxyribonucleotide no no ;(DG)(DC)(DC)(DG)(DT)(DC)(DT)(DG)(DA)(DG)(DG)(DG)(DC)(DA)(DA)(DT)(DT)(DT)(DG)(DT) (DC)(DA)(DC)(DA)(DG)(DG)(DT)(DC)(DC)(DG)(DG)(DA) ; GCCGTCTGAGGGCAATTTGTCACAGGTCCGGA B ? 3 'polypeptide(L)' no no ;MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYA EIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQ FRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIE KKKGRQTTHIVFSFRDITSMTTG ; ;MRGSHHHHHHGSMAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYA EIFGLTSAEASKDIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKPAHSPSRGLYSVHINPYLIPFFIGLQNRFTQ FRLSETKEITNPYAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIE KKKGRQTTHIVFSFRDITSMTTG ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DC n 1 4 DG n 1 5 DG n 1 6 DA n 1 7 DC n 1 8 DC n 1 9 DT n 1 10 DG n 1 11 DT n 1 12 DG n 1 13 DA n 1 14 DC n 1 15 DA n 1 16 DA n 1 17 DA n 1 18 DT n 1 19 DT n 1 20 DG n 1 21 DC n 1 22 DC n 1 23 DC n 1 24 DT n 1 25 DC n 1 26 DA n 1 27 DG n 1 28 DA n 1 29 DC n 1 30 DG n 1 31 DG n 1 32 DA n 2 1 DG n 2 2 DC n 2 3 DC n 2 4 DG n 2 5 DT n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DA n 2 10 DG n 2 11 DG n 2 12 DG n 2 13 DC n 2 14 DA n 2 15 DA n 2 16 DT n 2 17 DT n 2 18 DT n 2 19 DG n 2 20 DT n 2 21 DC n 2 22 DA n 2 23 DC n 2 24 DA n 2 25 DG n 2 26 DG n 2 27 DT n 2 28 DC n 2 29 DC n 2 30 DG n 2 31 DG n 2 32 DA n 3 1 MET n 3 2 ARG n 3 3 GLY n 3 4 SER n 3 5 HIS n 3 6 HIS n 3 7 HIS n 3 8 HIS n 3 9 HIS n 3 10 HIS n 3 11 GLY n 3 12 SER n 3 13 MET n 3 14 ALA n 3 15 GLU n 3 16 THR n 3 17 ALA n 3 18 VAL n 3 19 ILE n 3 20 ASN n 3 21 HIS n 3 22 LYS n 3 23 LYS n 3 24 ARG n 3 25 LYS n 3 26 ASN n 3 27 SER n 3 28 PRO n 3 29 ARG n 3 30 ILE n 3 31 VAL n 3 32 GLN n 3 33 SER n 3 34 ASN n 3 35 ASP n 3 36 LEU n 3 37 THR n 3 38 GLU n 3 39 ALA n 3 40 ALA n 3 41 TYR n 3 42 SER n 3 43 LEU n 3 44 SER n 3 45 ARG n 3 46 ASP n 3 47 GLN n 3 48 LYS n 3 49 ARG n 3 50 MET n 3 51 LEU n 3 52 TYR n 3 53 LEU n 3 54 PHE n 3 55 VAL n 3 56 ASP n 3 57 GLN n 3 58 ILE n 3 59 ARG n 3 60 LYS n 3 61 SER n 3 62 ASP n 3 63 GLY n 3 64 THR n 3 65 LEU n 3 66 GLN n 3 67 GLU n 3 68 HIS n 3 69 ASP n 3 70 GLY n 3 71 ILE n 3 72 CYS n 3 73 GLU n 3 74 ILE n 3 75 HIS n 3 76 VAL n 3 77 ALA n 3 78 LYS n 3 79 TYR n 3 80 ALA n 3 81 GLU n 3 82 ILE n 3 83 PHE n 3 84 GLY n 3 85 LEU n 3 86 THR n 3 87 SER n 3 88 ALA n 3 89 GLU n 3 90 ALA n 3 91 SER n 3 92 LYS n 3 93 ASP n 3 94 ILE n 3 95 ARG n 3 96 GLN n 3 97 ALA n 3 98 LEU n 3 99 LYS n 3 100 SER n 3 101 PHE n 3 102 ALA n 3 103 GLY n 3 104 LYS n 3 105 GLU n 3 106 VAL n 3 107 VAL n 3 108 PHE n 3 109 TYR n 3 110 ARG n 3 111 PRO n 3 112 GLU n 3 113 GLU n 3 114 ASP n 3 115 ALA n 3 116 GLY n 3 117 ASP n 3 118 GLU n 3 119 LYS n 3 120 GLY n 3 121 TYR n 3 122 GLU n 3 123 SER n 3 124 PHE n 3 125 PRO n 3 126 TRP n 3 127 PHE n 3 128 ILE n 3 129 LYS n 3 130 PRO n 3 131 ALA n 3 132 HIS n 3 133 SER n 3 134 PRO n 3 135 SER n 3 136 ARG n 3 137 GLY n 3 138 LEU n 3 139 TYR n 3 140 SER n 3 141 VAL n 3 142 HIS n 3 143 ILE n 3 144 ASN n 3 145 PRO n 3 146 TYR n 3 147 LEU n 3 148 ILE n 3 149 PRO n 3 150 PHE n 3 151 PHE n 3 152 ILE n 3 153 GLY n 3 154 LEU n 3 155 GLN n 3 156 ASN n 3 157 ARG n 3 158 PHE n 3 159 THR n 3 160 GLN n 3 161 PHE n 3 162 ARG n 3 163 LEU n 3 164 SER n 3 165 GLU n 3 166 THR n 3 167 LYS n 3 168 GLU n 3 169 ILE n 3 170 THR n 3 171 ASN n 3 172 PRO n 3 173 TYR n 3 174 ALA n 3 175 MET n 3 176 ARG n 3 177 LEU n 3 178 TYR n 3 179 GLU n 3 180 SER n 3 181 LEU n 3 182 CYS n 3 183 GLN n 3 184 TYR n 3 185 ARG n 3 186 LYS n 3 187 PRO n 3 188 ASP n 3 189 GLY n 3 190 SER n 3 191 GLY n 3 192 ILE n 3 193 VAL n 3 194 SER n 3 195 LEU n 3 196 LYS n 3 197 ILE n 3 198 ASP n 3 199 TRP n 3 200 ILE n 3 201 ILE n 3 202 GLU n 3 203 ARG n 3 204 TYR n 3 205 GLN n 3 206 LEU n 3 207 PRO n 3 208 GLN n 3 209 SER n 3 210 TYR n 3 211 GLN n 3 212 ARG n 3 213 MET n 3 214 PRO n 3 215 ASP n 3 216 PHE n 3 217 ARG n 3 218 ARG n 3 219 ARG n 3 220 PHE n 3 221 LEU n 3 222 GLN n 3 223 VAL n 3 224 CYS n 3 225 VAL n 3 226 ASN n 3 227 GLU n 3 228 ILE n 3 229 ASN n 3 230 SER n 3 231 ARG n 3 232 THR n 3 233 PRO n 3 234 MET n 3 235 ARG n 3 236 LEU n 3 237 SER n 3 238 TYR n 3 239 ILE n 3 240 GLU n 3 241 LYS n 3 242 LYS n 3 243 LYS n 3 244 GLY n 3 245 ARG n 3 246 GLN n 3 247 THR n 3 248 THR n 3 249 HIS n 3 250 ILE n 3 251 VAL n 3 252 PHE n 3 253 SER n 3 254 PHE n 3 255 ARG n 3 256 ASP n 3 257 ILE n 3 258 THR n 3 259 SER n 3 260 MET n 3 261 THR n 3 262 THR n 3 263 GLY n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 263 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'repE, E, rep, ECOK12F045' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 32 'Escherichia coli' ? 562 ? 2 1 sample 1 32 'Escherichia coli' ? 562 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8D8M 8D8M ? 1 ? 1 2 PDB 8D8M 8D8M ? 2 ? 1 3 UNP REPE1_ECOLI P03856 ? 3 ;MAETAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAEASK DIRQALKSFAGKEVVFYRPEEDAGDEKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNP YAMRLYESLCQYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRTPMRLSYIEKKKGRQTTHIVF SFRDITSMTTG ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8D8M A 1 ? 32 ? 8D8M 2 ? 33 ? 2 33 2 2 8D8M B 1 ? 32 ? 8D8M 3 ? 34 ? 3 34 3 3 8D8M C 13 ? 263 ? P03856 1 ? 251 ? 1 251 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 8D8M MET C 1 ? UNP P03856 ? ? 'initiating methionine' -11 1 3 8D8M ARG C 2 ? UNP P03856 ? ? 'expression tag' -10 2 3 8D8M GLY C 3 ? UNP P03856 ? ? 'expression tag' -9 3 3 8D8M SER C 4 ? UNP P03856 ? ? 'expression tag' -8 4 3 8D8M HIS C 5 ? UNP P03856 ? ? 'expression tag' -7 5 3 8D8M HIS C 6 ? UNP P03856 ? ? 'expression tag' -6 6 3 8D8M HIS C 7 ? UNP P03856 ? ? 'expression tag' -5 7 3 8D8M HIS C 8 ? UNP P03856 ? ? 'expression tag' -4 8 3 8D8M HIS C 9 ? UNP P03856 ? ? 'expression tag' -3 9 3 8D8M HIS C 10 ? UNP P03856 ? ? 'expression tag' -2 10 3 8D8M GLY C 11 ? UNP P03856 ? ? 'expression tag' -1 11 3 8D8M SER C 12 ? UNP P03856 ? ? 'expression tag' 0 12 3 8D8M PRO C 130 ? UNP P03856 ARG 118 'engineered mutation' 118 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8D8M _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.26 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '400 mM MgCl2, 24% PEG 400, and 80 mM Tris HCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CMOS _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RDI CMOS_8M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-12-16 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI (111) DOUBLE CRYSTAL' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 4.2.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 4.2.2 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 75.93 _reflns.entry_id 8D8M _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 37.98 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12285 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.77 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.0 _reflns.pdbx_Rmerge_I_obs 0.1145 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.18 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.124 _reflns.pdbx_Rpim_I_all 0.04712 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.211 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.06 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1202 _reflns_shell.percent_possible_all 99.83 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.279 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.376 _reflns_shell.pdbx_Rpim_I_all 0.504 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.887 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 92.41 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8D8M _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.10 _refine.ls_d_res_low 37.98 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12179 _refine.ls_number_reflns_R_free 1211 _refine.ls_number_reflns_R_work 10968 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.83 _refine.ls_percent_reflns_R_free 9.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2268 _refine.ls_R_factor_R_free 0.2552 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2235 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 7u6k _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.2955 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4340 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 37.98 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 3014 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1736 _refine_hist.pdbx_number_atoms_nucleic_acid 1273 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0139 ? 3261 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.5778 ? 4679 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0879 ? 508 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0132 ? 382 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 27.6339 ? 865 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.10 3.22 . . 136 1204 99.78 . . . 0.4361 . 0.3601 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.22 3.37 . . 123 1201 98.00 . . . 0.2810 . 0.2042 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.37 3.55 . . 132 1181 98.35 . . . 0.3466 . 0.2839 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.55 3.77 . . 131 1201 99.18 . . . 0.2998 . 0.2890 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.77 4.06 . . 137 1184 95.72 . . . 0.3259 . 0.2895 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.06 4.47 . . 130 1212 99.93 . . . 0.2455 . 0.2074 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.47 5.11 . . 136 1243 99.93 . . . 0.2305 . 0.1810 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.12 6.44 . . 143 1241 100.00 . . . 0.2300 . 0.1932 . . . . . . . . . . . 'X-RAY DIFFRACTION' 6.44 37.98 . . 143 1301 98.63 . . . 0.1943 . 0.1925 . . . . . . . . . . . # _struct.entry_id 8D8M _struct.title ;Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence grown in a calcium chloride crystallization solution. ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8D8M _struct_keywords.text 'Replication Initiator RepE Complex Co-Crystal, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN C 34 ? GLU C 38 ? ASN C 22 GLU C 26 1 ? 5 HELX_P HELX_P2 AA2 SER C 44 ? LYS C 60 ? SER C 32 LYS C 48 1 ? 17 HELX_P HELX_P3 AA3 VAL C 76 ? PHE C 83 ? VAL C 64 PHE C 71 1 ? 8 HELX_P HELX_P4 AA4 THR C 86 ? PHE C 101 ? THR C 74 PHE C 89 1 ? 16 HELX_P HELX_P5 AA5 ASN C 144 ? TYR C 146 ? ASN C 132 TYR C 134 5 ? 3 HELX_P HELX_P6 AA6 LEU C 147 ? ILE C 152 ? LEU C 135 ILE C 140 1 ? 6 HELX_P HELX_P7 AA7 SER C 164 ? THR C 166 ? SER C 152 THR C 154 5 ? 3 HELX_P HELX_P8 AA8 ASN C 171 ? GLN C 183 ? ASN C 159 GLN C 171 1 ? 13 HELX_P HELX_P9 AA9 ILE C 197 ? GLN C 205 ? ILE C 185 GLN C 193 1 ? 9 HELX_P HELX_P10 AB1 PRO C 207 ? GLN C 211 ? PRO C 195 GLN C 199 5 ? 5 HELX_P HELX_P11 AB2 ARG C 212 ? PHE C 220 ? ARG C 200 PHE C 208 1 ? 9 HELX_P HELX_P12 AB3 PHE C 220 ? THR C 232 ? PHE C 208 THR C 220 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DT 18 OP1 ? ? ? 1_555 D CA . CA ? ? A DT 19 A CA 101 1_555 ? ? ? ? ? ? ? 3.006 ? ? metalc2 metalc ? ? C GLU 89 OE2 ? ? ? 1_555 E CA . CA ? ? C GLU 77 C CA 301 1_555 ? ? ? ? ? ? ? 2.499 ? ? metalc3 metalc ? ? C ASP 93 OD1 ? ? ? 1_555 E CA . CA ? ? C ASP 81 C CA 301 1_555 ? ? ? ? ? ? ? 2.619 ? ? metalc4 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? C CA 301 C HOH 401 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc5 metalc ? ? E CA . CA ? ? ? 1_555 G HOH . O ? ? C CA 301 C HOH 402 1_555 ? ? ? ? ? ? ? 2.216 ? ? hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 31 N2 ? ? A DC 3 B DG 33 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog2 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 31 N1 ? ? A DC 3 B DG 33 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog3 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 30 N1 ? ? A DC 4 B DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 30 O6 ? ? A DC 4 B DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 30 N2 ? ? A DC 4 B DG 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 29 N3 ? ? A DG 5 B DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 29 O2 ? ? A DG 5 B DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 29 N4 ? ? A DG 5 B DC 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 28 N3 ? ? A DG 6 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 28 O2 ? ? A DG 6 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 28 N4 ? ? A DG 6 B DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 27 N3 ? ? A DA 7 B DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 27 O4 ? ? A DA 7 B DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 26 N1 ? ? A DC 8 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 26 O6 ? ? A DC 8 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 26 N2 ? ? A DC 8 B DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 25 N1 ? ? A DC 9 B DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 25 O6 ? ? A DC 9 B DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 25 N2 ? ? A DC 9 B DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 24 N1 ? ? A DT 10 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 24 N6 ? ? A DT 10 B DA 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 23 N3 ? ? A DG 11 B DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 23 O2 ? ? A DG 11 B DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 23 N4 ? ? A DG 11 B DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 11 N3 ? ? ? 1_555 B DA 22 N1 ? ? A DT 12 B DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 11 O4 ? ? ? 1_555 B DA 22 N6 ? ? A DT 12 B DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 21 N3 ? ? A DG 13 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 21 O2 ? ? A DG 13 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 21 N4 ? ? A DG 13 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 20 N3 ? ? A DA 14 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 20 O4 ? ? A DA 14 B DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 14 N3 ? ? ? 1_555 B DG 19 N1 ? ? A DC 15 B DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 14 N4 ? ? ? 1_555 B DG 19 O6 ? ? A DC 15 B DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 14 O2 ? ? ? 1_555 B DG 19 N2 ? ? A DC 15 B DG 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 18 N3 ? ? A DA 16 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 18 O4 ? ? A DA 16 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 17 N3 ? ? A DA 17 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 17 O4 ? ? A DA 17 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 16 N3 ? ? A DA 18 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 16 O4 ? ? A DA 18 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DT 18 N3 ? ? ? 1_555 B DA 15 N1 ? ? A DT 19 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DT 18 O4 ? ? ? 1_555 B DA 15 N6 ? ? A DT 19 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DT 19 N3 ? ? ? 1_555 B DA 14 N1 ? ? A DT 20 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DT 19 O4 ? ? ? 1_555 B DA 14 N6 ? ? A DT 20 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 20 N1 ? ? ? 1_555 B DC 13 N3 ? ? A DG 21 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 20 N2 ? ? ? 1_555 B DC 13 O2 ? ? A DG 21 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 20 O6 ? ? ? 1_555 B DC 13 N4 ? ? A DG 21 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DC 21 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 22 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DC 21 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 22 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DC 21 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 22 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DC 22 N3 ? ? ? 1_555 B DG 11 N1 ? ? A DC 23 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DC 22 N4 ? ? ? 1_555 B DG 11 O6 ? ? A DC 23 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DC 22 O2 ? ? ? 1_555 B DG 11 N2 ? ? A DC 23 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DC 23 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 24 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A DC 23 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 24 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DC 23 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 24 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DT 24 N3 ? ? ? 1_555 B DA 9 N1 ? ? A DT 25 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DT 24 O4 ? ? ? 1_555 B DA 9 N6 ? ? A DT 25 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DC 25 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 26 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DC 25 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 26 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A DC 25 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 26 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A DA 26 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 27 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A DA 26 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 27 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A DG 27 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 28 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A DG 27 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 28 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A DG 27 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 28 B DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A DA 28 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 29 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A DA 28 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 29 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A DC 29 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 30 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A DC 29 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 30 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A DC 29 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 30 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A DG 30 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 31 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A DG 30 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 31 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A DG 30 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 31 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A DG 31 N2 ? ? ? 1_555 B DC 2 N3 ? ? A DG 32 B DC 4 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG C 29 ? SER C 33 ? ARG C 17 SER C 21 AA1 2 PHE C 158 ? ARG C 162 ? PHE C 146 ARG C 150 AA2 1 ILE C 71 ? HIS C 75 ? ILE C 59 HIS C 63 AA2 2 LEU C 138 ? HIS C 142 ? LEU C 126 HIS C 130 AA3 1 GLU C 105 ? PHE C 108 ? GLU C 93 PHE C 96 AA3 2 GLU C 122 ? PRO C 125 ? GLU C 110 PRO C 113 AA4 1 GLY C 191 ? LYS C 196 ? GLY C 179 LYS C 184 AA4 2 GLN C 246 ? ASP C 256 ? GLN C 234 ASP C 244 AA4 3 MET C 234 ? LYS C 243 ? MET C 222 LYS C 231 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN C 32 ? N GLN C 20 O THR C 159 ? O THR C 147 AA2 1 2 N CYS C 72 ? N CYS C 60 O VAL C 141 ? O VAL C 129 AA3 1 2 N PHE C 108 ? N PHE C 96 O GLU C 122 ? O GLU C 110 AA4 1 2 N VAL C 193 ? N VAL C 181 O PHE C 252 ? O PHE C 240 AA4 2 3 O GLN C 246 ? O GLN C 234 N LYS C 243 ? N LYS C 231 # _atom_sites.entry_id 8D8M _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013638 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007508 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007427 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CA ? ? 16.26893 3.65395 ? ? 3.58509 77.28589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 2 2 DC DC A . n A 1 2 DC 2 3 3 DC DC A . n A 1 3 DC 3 4 4 DC DC A . n A 1 4 DG 4 5 5 DG DG A . n A 1 5 DG 5 6 6 DG DG A . n A 1 6 DA 6 7 7 DA DA A . n A 1 7 DC 7 8 8 DC DC A . n A 1 8 DC 8 9 9 DC DC A . n A 1 9 DT 9 10 10 DT DT A . n A 1 10 DG 10 11 11 DG DG A . n A 1 11 DT 11 12 12 DT DT A . n A 1 12 DG 12 13 13 DG DG A . n A 1 13 DA 13 14 14 DA DA A . n A 1 14 DC 14 15 15 DC DC A . n A 1 15 DA 15 16 16 DA DA A . n A 1 16 DA 16 17 17 DA DA A . n A 1 17 DA 17 18 18 DA DA A . n A 1 18 DT 18 19 19 DT DT A . n A 1 19 DT 19 20 20 DT DT A . n A 1 20 DG 20 21 21 DG DG A . n A 1 21 DC 21 22 22 DC DC A . n A 1 22 DC 22 23 23 DC DC A . n A 1 23 DC 23 24 24 DC DC A . n A 1 24 DT 24 25 25 DT DT A . n A 1 25 DC 25 26 26 DC DC A . n A 1 26 DA 26 27 27 DA DA A . n A 1 27 DG 27 28 28 DG DG A . n A 1 28 DA 28 29 29 DA DA A . n A 1 29 DC 29 30 30 DC DC A . n A 1 30 DG 30 31 31 DG DG A . n A 1 31 DG 31 32 32 DG DG A . n A 1 32 DA 32 33 33 DA DA A . n B 2 1 DG 1 3 3 DG DG B . n B 2 2 DC 2 4 4 DC DC B . n B 2 3 DC 3 5 5 DC DC B . n B 2 4 DG 4 6 6 DG DG B . n B 2 5 DT 5 7 7 DT DT B . n B 2 6 DC 6 8 8 DC DC B . n B 2 7 DT 7 9 9 DT DT B . n B 2 8 DG 8 10 10 DG DG B . n B 2 9 DA 9 11 11 DA DA B . n B 2 10 DG 10 12 12 DG DG B . n B 2 11 DG 11 13 13 DG DG B . n B 2 12 DG 12 14 14 DG DG B . n B 2 13 DC 13 15 15 DC DC B . n B 2 14 DA 14 16 16 DA DA B . n B 2 15 DA 15 17 17 DA DA B . n B 2 16 DT 16 18 18 DT DT B . n B 2 17 DT 17 19 19 DT DT B . n B 2 18 DT 18 20 20 DT DT B . n B 2 19 DG 19 21 21 DG DG B . n B 2 20 DT 20 22 22 DT DT B . n B 2 21 DC 21 23 23 DC DC B . n B 2 22 DA 22 24 24 DA DA B . n B 2 23 DC 23 25 25 DC DC B . n B 2 24 DA 24 26 26 DA DA B . n B 2 25 DG 25 27 27 DG DG B . n B 2 26 DG 26 28 28 DG DG B . n B 2 27 DT 27 29 29 DT DT B . n B 2 28 DC 28 30 30 DC DC B . n B 2 29 DC 29 31 31 DC DC B . n B 2 30 DG 30 32 32 DG DG B . n B 2 31 DG 31 33 33 DG DG B . n B 2 32 DA 32 34 34 DA DA B . n C 3 1 MET 1 -11 ? ? ? C . n C 3 2 ARG 2 -10 ? ? ? C . n C 3 3 GLY 3 -9 ? ? ? C . n C 3 4 SER 4 -8 ? ? ? C . n C 3 5 HIS 5 -7 ? ? ? C . n C 3 6 HIS 6 -6 ? ? ? C . n C 3 7 HIS 7 -5 ? ? ? C . n C 3 8 HIS 8 -4 ? ? ? C . n C 3 9 HIS 9 -3 ? ? ? C . n C 3 10 HIS 10 -2 ? ? ? C . n C 3 11 GLY 11 -1 ? ? ? C . n C 3 12 SER 12 0 ? ? ? C . n C 3 13 MET 13 1 ? ? ? C . n C 3 14 ALA 14 2 ? ? ? C . n C 3 15 GLU 15 3 ? ? ? C . n C 3 16 THR 16 4 ? ? ? C . n C 3 17 ALA 17 5 ? ? ? C . n C 3 18 VAL 18 6 ? ? ? C . n C 3 19 ILE 19 7 ? ? ? C . n C 3 20 ASN 20 8 ? ? ? C . n C 3 21 HIS 21 9 ? ? ? C . n C 3 22 LYS 22 10 ? ? ? C . n C 3 23 LYS 23 11 ? ? ? C . n C 3 24 ARG 24 12 ? ? ? C . n C 3 25 LYS 25 13 ? ? ? C . n C 3 26 ASN 26 14 ? ? ? C . n C 3 27 SER 27 15 15 SER SER C . n C 3 28 PRO 28 16 16 PRO PRO C . n C 3 29 ARG 29 17 17 ARG ARG C . n C 3 30 ILE 30 18 18 ILE ILE C . n C 3 31 VAL 31 19 19 VAL VAL C . n C 3 32 GLN 32 20 20 GLN GLN C . n C 3 33 SER 33 21 21 SER SER C . n C 3 34 ASN 34 22 22 ASN ASN C . n C 3 35 ASP 35 23 23 ASP ASP C . n C 3 36 LEU 36 24 24 LEU LEU C . n C 3 37 THR 37 25 25 THR THR C . n C 3 38 GLU 38 26 26 GLU GLU C . n C 3 39 ALA 39 27 27 ALA ALA C . n C 3 40 ALA 40 28 28 ALA ALA C . n C 3 41 TYR 41 29 29 TYR TYR C . n C 3 42 SER 42 30 30 SER SER C . n C 3 43 LEU 43 31 31 LEU LEU C . n C 3 44 SER 44 32 32 SER SER C . n C 3 45 ARG 45 33 33 ARG ARG C . n C 3 46 ASP 46 34 34 ASP ASP C . n C 3 47 GLN 47 35 35 GLN GLN C . n C 3 48 LYS 48 36 36 LYS LYS C . n C 3 49 ARG 49 37 37 ARG ARG C . n C 3 50 MET 50 38 38 MET MET C . n C 3 51 LEU 51 39 39 LEU LEU C . n C 3 52 TYR 52 40 40 TYR TYR C . n C 3 53 LEU 53 41 41 LEU LEU C . n C 3 54 PHE 54 42 42 PHE PHE C . n C 3 55 VAL 55 43 43 VAL VAL C . n C 3 56 ASP 56 44 44 ASP ASP C . n C 3 57 GLN 57 45 45 GLN GLN C . n C 3 58 ILE 58 46 46 ILE ILE C . n C 3 59 ARG 59 47 47 ARG ARG C . n C 3 60 LYS 60 48 48 LYS LYS C . n C 3 61 SER 61 49 49 SER SER C . n C 3 62 ASP 62 50 ? ? ? C . n C 3 63 GLY 63 51 ? ? ? C . n C 3 64 THR 64 52 ? ? ? C . n C 3 65 LEU 65 53 ? ? ? C . n C 3 66 GLN 66 54 ? ? ? C . n C 3 67 GLU 67 55 ? ? ? C . n C 3 68 HIS 68 56 ? ? ? C . n C 3 69 ASP 69 57 57 ASP ASP C . n C 3 70 GLY 70 58 58 GLY GLY C . n C 3 71 ILE 71 59 59 ILE ILE C . n C 3 72 CYS 72 60 60 CYS CYS C . n C 3 73 GLU 73 61 61 GLU GLU C . n C 3 74 ILE 74 62 62 ILE ILE C . n C 3 75 HIS 75 63 63 HIS HIS C . n C 3 76 VAL 76 64 64 VAL VAL C . n C 3 77 ALA 77 65 65 ALA ALA C . n C 3 78 LYS 78 66 66 LYS LYS C . n C 3 79 TYR 79 67 67 TYR TYR C . n C 3 80 ALA 80 68 68 ALA ALA C . n C 3 81 GLU 81 69 69 GLU GLU C . n C 3 82 ILE 82 70 70 ILE ILE C . n C 3 83 PHE 83 71 71 PHE PHE C . n C 3 84 GLY 84 72 72 GLY GLY C . n C 3 85 LEU 85 73 73 LEU LEU C . n C 3 86 THR 86 74 74 THR THR C . n C 3 87 SER 87 75 75 SER SER C . n C 3 88 ALA 88 76 76 ALA ALA C . n C 3 89 GLU 89 77 77 GLU GLU C . n C 3 90 ALA 90 78 78 ALA ALA C . n C 3 91 SER 91 79 79 SER SER C . n C 3 92 LYS 92 80 80 LYS LYS C . n C 3 93 ASP 93 81 81 ASP ASP C . n C 3 94 ILE 94 82 82 ILE ILE C . n C 3 95 ARG 95 83 83 ARG ARG C . n C 3 96 GLN 96 84 84 GLN GLN C . n C 3 97 ALA 97 85 85 ALA ALA C . n C 3 98 LEU 98 86 86 LEU LEU C . n C 3 99 LYS 99 87 87 LYS LYS C . n C 3 100 SER 100 88 88 SER SER C . n C 3 101 PHE 101 89 89 PHE PHE C . n C 3 102 ALA 102 90 90 ALA ALA C . n C 3 103 GLY 103 91 91 GLY GLY C . n C 3 104 LYS 104 92 92 LYS LYS C . n C 3 105 GLU 105 93 93 GLU GLU C . n C 3 106 VAL 106 94 94 VAL VAL C . n C 3 107 VAL 107 95 95 VAL VAL C . n C 3 108 PHE 108 96 96 PHE PHE C . n C 3 109 TYR 109 97 97 TYR TYR C . n C 3 110 ARG 110 98 ? ? ? C . n C 3 111 PRO 111 99 ? ? ? C . n C 3 112 GLU 112 100 ? ? ? C . n C 3 113 GLU 113 101 ? ? ? C . n C 3 114 ASP 114 102 ? ? ? C . n C 3 115 ALA 115 103 ? ? ? C . n C 3 116 GLY 116 104 ? ? ? C . n C 3 117 ASP 117 105 ? ? ? C . n C 3 118 GLU 118 106 ? ? ? C . n C 3 119 LYS 119 107 ? ? ? C . n C 3 120 GLY 120 108 ? ? ? C . n C 3 121 TYR 121 109 109 TYR TYR C . n C 3 122 GLU 122 110 110 GLU GLU C . n C 3 123 SER 123 111 111 SER SER C . n C 3 124 PHE 124 112 112 PHE PHE C . n C 3 125 PRO 125 113 113 PRO PRO C . n C 3 126 TRP 126 114 114 TRP TRP C . n C 3 127 PHE 127 115 115 PHE PHE C . n C 3 128 ILE 128 116 116 ILE ILE C . n C 3 129 LYS 129 117 117 LYS LYS C . n C 3 130 PRO 130 118 118 PRO PRO C . n C 3 131 ALA 131 119 119 ALA ALA C . n C 3 132 HIS 132 120 120 HIS HIS C . n C 3 133 SER 133 121 121 SER SER C . n C 3 134 PRO 134 122 122 PRO PRO C . n C 3 135 SER 135 123 123 SER SER C . n C 3 136 ARG 136 124 124 ARG ARG C . n C 3 137 GLY 137 125 125 GLY GLY C . n C 3 138 LEU 138 126 126 LEU LEU C . n C 3 139 TYR 139 127 127 TYR TYR C . n C 3 140 SER 140 128 128 SER SER C . n C 3 141 VAL 141 129 129 VAL VAL C . n C 3 142 HIS 142 130 130 HIS HIS C . n C 3 143 ILE 143 131 131 ILE ILE C . n C 3 144 ASN 144 132 132 ASN ASN C . n C 3 145 PRO 145 133 133 PRO PRO C . n C 3 146 TYR 146 134 134 TYR TYR C . n C 3 147 LEU 147 135 135 LEU LEU C . n C 3 148 ILE 148 136 136 ILE ILE C . n C 3 149 PRO 149 137 137 PRO PRO C . n C 3 150 PHE 150 138 138 PHE PHE C . n C 3 151 PHE 151 139 139 PHE PHE C . n C 3 152 ILE 152 140 140 ILE ILE C . n C 3 153 GLY 153 141 141 GLY GLY C . n C 3 154 LEU 154 142 ? ? ? C . n C 3 155 GLN 155 143 ? ? ? C . n C 3 156 ASN 156 144 ? ? ? C . n C 3 157 ARG 157 145 145 ARG ARG C . n C 3 158 PHE 158 146 146 PHE PHE C . n C 3 159 THR 159 147 147 THR THR C . n C 3 160 GLN 160 148 148 GLN GLN C . n C 3 161 PHE 161 149 149 PHE PHE C . n C 3 162 ARG 162 150 150 ARG ARG C . n C 3 163 LEU 163 151 151 LEU LEU C . n C 3 164 SER 164 152 152 SER SER C . n C 3 165 GLU 165 153 153 GLU GLU C . n C 3 166 THR 166 154 154 THR THR C . n C 3 167 LYS 167 155 155 LYS LYS C . n C 3 168 GLU 168 156 156 GLU GLU C . n C 3 169 ILE 169 157 157 ILE ILE C . n C 3 170 THR 170 158 158 THR THR C . n C 3 171 ASN 171 159 159 ASN ASN C . n C 3 172 PRO 172 160 160 PRO PRO C . n C 3 173 TYR 173 161 161 TYR TYR C . n C 3 174 ALA 174 162 162 ALA ALA C . n C 3 175 MET 175 163 163 MET MET C . n C 3 176 ARG 176 164 164 ARG ARG C . n C 3 177 LEU 177 165 165 LEU LEU C . n C 3 178 TYR 178 166 166 TYR TYR C . n C 3 179 GLU 179 167 167 GLU GLU C . n C 3 180 SER 180 168 168 SER SER C . n C 3 181 LEU 181 169 169 LEU LEU C . n C 3 182 CYS 182 170 170 CYS CYS C . n C 3 183 GLN 183 171 171 GLN GLN C . n C 3 184 TYR 184 172 172 TYR TYR C . n C 3 185 ARG 185 173 173 ARG ARG C . n C 3 186 LYS 186 174 174 LYS LYS C . n C 3 187 PRO 187 175 175 PRO PRO C . n C 3 188 ASP 188 176 176 ASP ASP C . n C 3 189 GLY 189 177 177 GLY GLY C . n C 3 190 SER 190 178 178 SER SER C . n C 3 191 GLY 191 179 179 GLY GLY C . n C 3 192 ILE 192 180 180 ILE ILE C . n C 3 193 VAL 193 181 181 VAL VAL C . n C 3 194 SER 194 182 182 SER SER C . n C 3 195 LEU 195 183 183 LEU LEU C . n C 3 196 LYS 196 184 184 LYS LYS C . n C 3 197 ILE 197 185 185 ILE ILE C . n C 3 198 ASP 198 186 186 ASP ASP C . n C 3 199 TRP 199 187 187 TRP TRP C . n C 3 200 ILE 200 188 188 ILE ILE C . n C 3 201 ILE 201 189 189 ILE ILE C . n C 3 202 GLU 202 190 190 GLU GLU C . n C 3 203 ARG 203 191 191 ARG ARG C . n C 3 204 TYR 204 192 192 TYR TYR C . n C 3 205 GLN 205 193 193 GLN GLN C . n C 3 206 LEU 206 194 194 LEU LEU C . n C 3 207 PRO 207 195 195 PRO PRO C . n C 3 208 GLN 208 196 196 GLN GLN C . n C 3 209 SER 209 197 197 SER SER C . n C 3 210 TYR 210 198 198 TYR TYR C . n C 3 211 GLN 211 199 199 GLN GLN C . n C 3 212 ARG 212 200 200 ARG ARG C . n C 3 213 MET 213 201 201 MET MET C . n C 3 214 PRO 214 202 202 PRO PRO C . n C 3 215 ASP 215 203 203 ASP ASP C . n C 3 216 PHE 216 204 204 PHE PHE C . n C 3 217 ARG 217 205 205 ARG ARG C . n C 3 218 ARG 218 206 206 ARG ARG C . n C 3 219 ARG 219 207 207 ARG ARG C . n C 3 220 PHE 220 208 208 PHE PHE C . n C 3 221 LEU 221 209 209 LEU LEU C . n C 3 222 GLN 222 210 210 GLN GLN C . n C 3 223 VAL 223 211 211 VAL VAL C . n C 3 224 CYS 224 212 212 CYS CYS C . n C 3 225 VAL 225 213 213 VAL VAL C . n C 3 226 ASN 226 214 214 ASN ASN C . n C 3 227 GLU 227 215 215 GLU GLU C . n C 3 228 ILE 228 216 216 ILE ILE C . n C 3 229 ASN 229 217 217 ASN ASN C . n C 3 230 SER 230 218 218 SER SER C . n C 3 231 ARG 231 219 219 ARG ARG C . n C 3 232 THR 232 220 220 THR THR C . n C 3 233 PRO 233 221 221 PRO PRO C . n C 3 234 MET 234 222 222 MET MET C . n C 3 235 ARG 235 223 223 ARG ARG C . n C 3 236 LEU 236 224 224 LEU LEU C . n C 3 237 SER 237 225 225 SER SER C . n C 3 238 TYR 238 226 226 TYR TYR C . n C 3 239 ILE 239 227 227 ILE ILE C . n C 3 240 GLU 240 228 228 GLU GLU C . n C 3 241 LYS 241 229 229 LYS LYS C . n C 3 242 LYS 242 230 230 LYS LYS C . n C 3 243 LYS 243 231 231 LYS LYS C . n C 3 244 GLY 244 232 232 GLY GLY C . n C 3 245 ARG 245 233 233 ARG ARG C . n C 3 246 GLN 246 234 234 GLN GLN C . n C 3 247 THR 247 235 235 THR THR C . n C 3 248 THR 248 236 236 THR THR C . n C 3 249 HIS 249 237 237 HIS HIS C . n C 3 250 ILE 250 238 238 ILE ILE C . n C 3 251 VAL 251 239 239 VAL VAL C . n C 3 252 PHE 252 240 240 PHE PHE C . n C 3 253 SER 253 241 241 SER SER C . n C 3 254 PHE 254 242 242 PHE PHE C . n C 3 255 ARG 255 243 243 ARG ARG C . n C 3 256 ASP 256 244 244 ASP ASP C . n C 3 257 ILE 257 245 245 ILE ILE C . n C 3 258 THR 258 246 ? ? ? C . n C 3 259 SER 259 247 ? ? ? C . n C 3 260 MET 260 248 ? ? ? C . n C 3 261 THR 261 249 ? ? ? C . n C 3 262 THR 262 250 ? ? ? C . n C 3 263 GLY 263 251 ? ? ? C . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email christopher.snow@colostate.edu _pdbx_contact_author.name_first Christopher _pdbx_contact_author.name_last Snow _pdbx_contact_author.name_mi D _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7690-3519 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA 1 101 2 CA CA A . E 4 CA 1 301 1 CA CA C . F 5 HOH 1 201 2 HOH HOH A . G 5 HOH 1 401 1 HOH HOH C . G 5 HOH 2 402 3 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6090 ? 1 MORE -47 ? 1 'SSA (A^2)' 19910 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? C GLU 89 ? C GLU 77 ? 1_555 CA ? E CA . ? C CA 301 ? 1_555 OD1 ? C ASP 93 ? C ASP 81 ? 1_555 77.5 ? 2 OE2 ? C GLU 89 ? C GLU 77 ? 1_555 CA ? E CA . ? C CA 301 ? 1_555 O ? G HOH . ? C HOH 401 ? 1_555 58.1 ? 3 OD1 ? C ASP 93 ? C ASP 81 ? 1_555 CA ? E CA . ? C CA 301 ? 1_555 O ? G HOH . ? C HOH 401 ? 1_555 135.6 ? 4 OE2 ? C GLU 89 ? C GLU 77 ? 1_555 CA ? E CA . ? C CA 301 ? 1_555 O ? G HOH . ? C HOH 402 ? 1_555 108.2 ? 5 OD1 ? C ASP 93 ? C ASP 81 ? 1_555 CA ? E CA . ? C CA 301 ? 1_555 O ? G HOH . ? C HOH 402 ? 1_555 81.5 ? 6 O ? G HOH . ? C HOH 401 ? 1_555 CA ? E CA . ? C CA 301 ? 1_555 O ? G HOH . ? C HOH 402 ? 1_555 110.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-06-28 2 'Structure model' 1 1 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x,-y,-z 3 -x,y,-z 4 -x,-y,z 5 x+1/2,y+1/2,z+1/2 6 x+1/2,-y+1/2,-z+1/2 7 -x+1/2,y+1/2,-z+1/2 8 -x+1/2,-y+1/2,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -17.4898713995 -0.314835786494 -56.3793542081 0.927679270267 ? 0.208146038312 ? -0.0148236523283 ? 0.904027691714 ? 0.353821901647 ? 0.917541504157 ? 0.138609566145 ? -0.0192084553259 ? -0.0665889908168 ? 0.0341281712102 ? 0.0589872368906 ? 0.0779410150423 ? -0.143365021126 ? 0.55726865502 ? 0.42543955443 ? -0.395489565244 ? 0.0359489189206 ? 0.144905714492 ? -0.296234127751 ? 0.0505605995564 ? -0.00247834666603 ? 2 'X-RAY DIFFRACTION' ? refined 0.830101922101 -33.2377167757 -22.1608661668 1.50624151277 ? 0.624195536523 ? 0.0449337358643 ? 0.734756656506 ? 1.21072626024 ? 1.34889010822 ? 0.0990712801763 ? -0.0854089375107 ? 0.0444414054469 ? 0.0641134823396 ? -0.0122087764772 ? 0.0163020297177 ? -0.0259025614901 ? -0.186498017156 ? -0.34606362361 ? 0.391203194036 ? -0.0471322126368 ? -0.0406278164715 ? 0.32576170659 ? 0.108152492107 ? -0.0573533940923 ? 3 'X-RAY DIFFRACTION' ? refined 1.27189257337 -32.7315071292 -25.5216981354 1.4481360863 ? 0.6358664447 ? -0.23180771943 ? 0.866682051534 ? 0.877905683741 ? 1.21417294264 ? 0.0684547261596 ? -0.0716477508688 ? -0.0542953715882 ? 0.0745854399518 ? 0.0970834132534 ? 0.0819236443455 ? 0.24234792119 ? -0.39120257959 ? -0.475957933412 ? 0.362866841188 ? 0.0137031167525 ? -0.212992325856 ? 0.336983202842 ? 0.21441946811 ? 0.0362239360925 ? 4 'X-RAY DIFFRACTION' ? refined -19.7931456676 2.85726352832 -56.526292633 1.3509967557 ? 0.263768314703 ? -0.0216120789247 ? 0.710949840833 ? 0.285824136158 ? 0.773243241628 ? 0.0633795008374 ? 0.0198990215414 ? -0.0233230784416 ? 0.00840941019383 ? 0.0198868633241 ? 0.0578012980352 ? -0.126712953247 ? 0.319445890584 ? 0.400518437198 ? -0.575116626144 ? 0.059913237901 ? 0.160068565528 ? -0.689550912748 ? 0.0799112074621 ? -0.0212211356863 ? 5 'X-RAY DIFFRACTION' ? refined -10.7257269906 -14.8457863151 -18.479058121 0.294957302966 ? 0.224140301547 ? -0.168354676178 ? 0.871309338365 ? 0.719424913947 ? 0.426152251757 ? 0.0336677533812 ? 0.0275923732635 ? 0.0514900694363 ? 0.0776615690633 ? -0.0651280975254 ? 0.193801793623 ? -0.0680034737553 ? -0.319340206152 ? -0.16092844404 ? -0.102271814468 ? -0.189468006313 ? -0.156247440138 ? 0.39642286568 ? -0.013721092909 ? -0.277886316646 ? 6 'X-RAY DIFFRACTION' ? refined -3.35047955651 -6.39877808281 -17.0733918534 0.350083845491 ? 0.258218069674 ? 0.0177245063311 ? 0.982778972105 ? 0.147095515835 ? 0.423000001543 ? 0.0115387057557 ? 0.0146161181865 ? 0.0331603511748 ? 0.00959279736181 ? 0.0302906928622 ? 0.0512867828147 ? -0.0471012979815 ? -0.326448894061 ? -0.0874123993341 ? 0.116237733088 ? -0.136199678518 ? -0.0661790812214 ? 0.257932776789 ? 0.0936983797548 ? -0.0244114350073 ? 7 'X-RAY DIFFRACTION' ? refined -20.8749982477 -5.41710209586 -27.9043181712 0.175543758487 ? 0.138589297795 ? 0.047780999428 ? 0.709628285881 ? 0.176647047011 ? 0.42008708367 ? 0.0584490067891 ? 0.0904971803232 ? -0.0127901631174 ? 0.52400772146 ? 0.0183571241544 ? 0.0275162297972 ? -0.235659941615 ? -0.554143683045 ? 0.11105092954 ? -0.294005670593 ? 0.00427370796669 ? 0.253147154559 ? 0.0591074412017 ? -0.0809957693159 ? -0.0948865401031 ? 8 'X-RAY DIFFRACTION' ? refined -29.4583840139 -7.91911237355 -35.4132803193 0.432362714122 ? -0.00816068394362 ? 0.0218738540038 ? 0.473826763926 ? 0.100234112709 ? 0.636481408566 ? 0.0376459264752 ? -0.016130317553 ? 0.00438942346482 ? 0.00674931337944 ? 0.00405032301995 ? 0.0148320371425 ? -0.0153909156791 ? 0.00500436071068 ? 0.0954349455499 ? -0.0788632143284 ? 0.0244311860039 ? 0.104841353887 ? 0.0283724243137 ? -0.157604494874 ? -0.000136647115363 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 2 ? A ? A 18 ? ? ;chain 'A' and (resid 2 through 18 ) ; 2 'X-RAY DIFFRACTION' 2 A ? A 19 ? A ? A 33 ? ? ;chain 'A' and (resid 19 through 33 ) ; 3 'X-RAY DIFFRACTION' 3 B ? B 3 ? B ? B 19 ? ? ;chain 'B' and (resid 3 through 19 ) ; 4 'X-RAY DIFFRACTION' 4 B ? B 20 ? B ? B 34 ? ? ;chain 'B' and (resid 20 through 34 ) ; 5 'X-RAY DIFFRACTION' 5 C 1 C 15 ? C 68 C 89 ? ? ;chain 'C' and (resid 15 through 89 ) ; 6 'X-RAY DIFFRACTION' 6 C 69 C 90 ? C 100 C 132 ? ? ;chain 'C' and (resid 90 through 132 ) ; 7 'X-RAY DIFFRACTION' 7 C 101 C 133 ? C 173 C 208 ? ? ;chain 'C' and (resid 133 through 208) ; 8 'X-RAY DIFFRACTION' 8 C 174 C 209 ? C 210 C 245 ? ? ;chain 'C' and (resid 209 through 245 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? '0.8.9.3-pre EL' 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'Jan 31, 2020' 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 'Jan 31, 2020' 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? 3.3.22 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.2 6 # _pdbx_entry_details.entry_id 8D8M _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP2 A DG 21 ? ? O A HOH 201 ? ? 2.14 2 1 N4 A DC 3 ? ? O6 B DG 33 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DT 12 ? ? "C3'" A DT 12 ? ? 1.370 1.419 -0.049 0.006 N 2 1 "O3'" A DG 31 ? ? "C3'" A DG 31 ? ? 1.350 1.419 -0.069 0.006 N 3 1 N9 B DA 24 ? ? C4 B DA 24 ? ? 1.410 1.374 0.036 0.006 N 4 1 "C1'" B DC 30 ? ? N1 B DC 30 ? ? 1.587 1.488 0.099 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" A DC 2 ? ? "O4'" A DC 2 ? ? "C4'" A DC 2 ? ? 101.86 110.10 -8.24 1.00 N 2 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 112.89 108.30 4.59 0.30 N 3 1 "O5'" A DG 11 ? ? P A DG 11 ? ? OP2 A DG 11 ? ? 98.48 105.70 -7.22 0.90 N 4 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 111.26 108.30 2.96 0.30 N 5 1 "O4'" A DC 26 ? ? "C1'" A DC 26 ? ? N1 A DC 26 ? ? 110.71 108.30 2.41 0.30 N 6 1 "O4'" A DG 32 ? ? "C1'" A DG 32 ? ? N9 A DG 32 ? ? 116.88 108.30 8.58 0.30 N 7 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 110.62 108.30 2.32 0.30 N 8 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.27 108.30 1.97 0.30 N 9 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.84 108.30 3.54 0.30 N 10 1 "O3'" B DT 22 ? ? P B DC 23 ? ? OP2 B DC 23 ? ? 120.21 110.50 9.71 1.10 Y 11 1 P B DG 27 ? ? "O5'" B DG 27 ? ? "C5'" B DG 27 ? ? 110.13 120.90 -10.77 1.60 N 12 1 "O3'" B DG 27 ? ? P B DG 28 ? ? OP2 B DG 28 ? ? 117.66 110.50 7.16 1.10 Y 13 1 "O5'" B DG 32 ? ? P B DG 32 ? ? OP2 B DG 32 ? ? 99.15 105.70 -6.55 0.90 N 14 1 "O4'" B DG 33 ? ? "C1'" B DG 33 ? ? N9 B DG 33 ? ? 110.28 108.30 1.98 0.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 132 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -50.43 _pdbx_validate_torsion.psi 109.19 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DA 33 ? "C5'" ? A DA 32 "C5'" 2 1 Y 1 A DA 33 ? "C4'" ? A DA 32 "C4'" 3 1 Y 1 A DA 33 ? "O4'" ? A DA 32 "O4'" 4 1 Y 1 A DA 33 ? "C3'" ? A DA 32 "C3'" 5 1 Y 1 A DA 33 ? "O3'" ? A DA 32 "O3'" 6 1 Y 1 A DA 33 ? "C2'" ? A DA 32 "C2'" 7 1 Y 1 A DA 33 ? "C1'" ? A DA 32 "C1'" 8 1 Y 1 A DA 33 ? N9 ? A DA 32 N9 9 1 Y 1 A DA 33 ? C8 ? A DA 32 C8 10 1 Y 1 A DA 33 ? N7 ? A DA 32 N7 11 1 Y 1 A DA 33 ? C5 ? A DA 32 C5 12 1 Y 1 A DA 33 ? C6 ? A DA 32 C6 13 1 Y 1 A DA 33 ? N6 ? A DA 32 N6 14 1 Y 1 A DA 33 ? N1 ? A DA 32 N1 15 1 Y 1 A DA 33 ? C2 ? A DA 32 C2 16 1 Y 1 A DA 33 ? N3 ? A DA 32 N3 17 1 Y 1 A DA 33 ? C4 ? A DA 32 C4 18 1 Y 1 B DA 34 ? "C5'" ? B DA 32 "C5'" 19 1 Y 1 B DA 34 ? "C4'" ? B DA 32 "C4'" 20 1 Y 1 B DA 34 ? "O4'" ? B DA 32 "O4'" 21 1 Y 1 B DA 34 ? "C3'" ? B DA 32 "C3'" 22 1 Y 1 B DA 34 ? "O3'" ? B DA 32 "O3'" 23 1 Y 1 B DA 34 ? "C2'" ? B DA 32 "C2'" 24 1 Y 1 B DA 34 ? "C1'" ? B DA 32 "C1'" 25 1 Y 1 B DA 34 ? N9 ? B DA 32 N9 26 1 Y 1 B DA 34 ? C8 ? B DA 32 C8 27 1 Y 1 B DA 34 ? N7 ? B DA 32 N7 28 1 Y 1 B DA 34 ? C5 ? B DA 32 C5 29 1 Y 1 B DA 34 ? C6 ? B DA 32 C6 30 1 Y 1 B DA 34 ? N6 ? B DA 32 N6 31 1 Y 1 B DA 34 ? N1 ? B DA 32 N1 32 1 Y 1 B DA 34 ? C2 ? B DA 32 C2 33 1 Y 1 B DA 34 ? N3 ? B DA 32 N3 34 1 Y 1 B DA 34 ? C4 ? B DA 32 C4 35 1 Y 1 C ARG 17 ? CG ? C ARG 29 CG 36 1 Y 1 C ARG 17 ? CD ? C ARG 29 CD 37 1 Y 1 C ARG 17 ? NE ? C ARG 29 NE 38 1 Y 1 C ARG 17 ? CZ ? C ARG 29 CZ 39 1 Y 1 C ARG 17 ? NH1 ? C ARG 29 NH1 40 1 Y 1 C ARG 17 ? NH2 ? C ARG 29 NH2 41 1 Y 1 C LYS 117 ? CE ? C LYS 129 CE 42 1 Y 1 C LYS 117 ? NZ ? C LYS 129 NZ 43 1 Y 1 C ARG 145 ? CG ? C ARG 157 CG 44 1 Y 1 C ARG 145 ? CD ? C ARG 157 CD 45 1 Y 1 C ARG 145 ? NE ? C ARG 157 NE 46 1 Y 1 C ARG 145 ? CZ ? C ARG 157 CZ 47 1 Y 1 C ARG 145 ? NH1 ? C ARG 157 NH1 48 1 Y 1 C ARG 145 ? NH2 ? C ARG 157 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C MET -11 ? C MET 1 2 1 Y 1 C ARG -10 ? C ARG 2 3 1 Y 1 C GLY -9 ? C GLY 3 4 1 Y 1 C SER -8 ? C SER 4 5 1 Y 1 C HIS -7 ? C HIS 5 6 1 Y 1 C HIS -6 ? C HIS 6 7 1 Y 1 C HIS -5 ? C HIS 7 8 1 Y 1 C HIS -4 ? C HIS 8 9 1 Y 1 C HIS -3 ? C HIS 9 10 1 Y 1 C HIS -2 ? C HIS 10 11 1 Y 1 C GLY -1 ? C GLY 11 12 1 Y 1 C SER 0 ? C SER 12 13 1 Y 1 C MET 1 ? C MET 13 14 1 Y 1 C ALA 2 ? C ALA 14 15 1 Y 1 C GLU 3 ? C GLU 15 16 1 Y 1 C THR 4 ? C THR 16 17 1 Y 1 C ALA 5 ? C ALA 17 18 1 Y 1 C VAL 6 ? C VAL 18 19 1 Y 1 C ILE 7 ? C ILE 19 20 1 Y 1 C ASN 8 ? C ASN 20 21 1 Y 1 C HIS 9 ? C HIS 21 22 1 Y 1 C LYS 10 ? C LYS 22 23 1 Y 1 C LYS 11 ? C LYS 23 24 1 Y 1 C ARG 12 ? C ARG 24 25 1 Y 1 C LYS 13 ? C LYS 25 26 1 Y 1 C ASN 14 ? C ASN 26 27 1 Y 1 C ASP 50 ? C ASP 62 28 1 Y 1 C GLY 51 ? C GLY 63 29 1 Y 1 C THR 52 ? C THR 64 30 1 Y 1 C LEU 53 ? C LEU 65 31 1 Y 1 C GLN 54 ? C GLN 66 32 1 Y 1 C GLU 55 ? C GLU 67 33 1 Y 1 C HIS 56 ? C HIS 68 34 1 Y 1 C ARG 98 ? C ARG 110 35 1 Y 1 C PRO 99 ? C PRO 111 36 1 Y 1 C GLU 100 ? C GLU 112 37 1 Y 1 C GLU 101 ? C GLU 113 38 1 Y 1 C ASP 102 ? C ASP 114 39 1 Y 1 C ALA 103 ? C ALA 115 40 1 Y 1 C GLY 104 ? C GLY 116 41 1 Y 1 C ASP 105 ? C ASP 117 42 1 Y 1 C GLU 106 ? C GLU 118 43 1 Y 1 C LYS 107 ? C LYS 119 44 1 Y 1 C GLY 108 ? C GLY 120 45 1 Y 1 C LEU 142 ? C LEU 154 46 1 Y 1 C GLN 143 ? C GLN 155 47 1 Y 1 C ASN 144 ? C ASN 156 48 1 Y 1 C THR 246 ? C THR 258 49 1 Y 1 C SER 247 ? C SER 259 50 1 Y 1 C MET 248 ? C MET 260 51 1 Y 1 C THR 249 ? C THR 261 52 1 Y 1 C THR 250 ? C THR 262 53 1 Y 1 C GLY 251 ? C GLY 263 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TRP N N N N 465 TRP CA C N S 466 TRP C C N N 467 TRP O O N N 468 TRP CB C N N 469 TRP CG C Y N 470 TRP CD1 C Y N 471 TRP CD2 C Y N 472 TRP NE1 N Y N 473 TRP CE2 C Y N 474 TRP CE3 C Y N 475 TRP CZ2 C Y N 476 TRP CZ3 C Y N 477 TRP CH2 C Y N 478 TRP OXT O N N 479 TRP H H N N 480 TRP H2 H N N 481 TRP HA H N N 482 TRP HB2 H N N 483 TRP HB3 H N N 484 TRP HD1 H N N 485 TRP HE1 H N N 486 TRP HE3 H N N 487 TRP HZ2 H N N 488 TRP HZ3 H N N 489 TRP HH2 H N N 490 TRP HXT H N N 491 TYR N N N N 492 TYR CA C N S 493 TYR C C N N 494 TYR O O N N 495 TYR CB C N N 496 TYR CG C Y N 497 TYR CD1 C Y N 498 TYR CD2 C Y N 499 TYR CE1 C Y N 500 TYR CE2 C Y N 501 TYR CZ C Y N 502 TYR OH O N N 503 TYR OXT O N N 504 TYR H H N N 505 TYR H2 H N N 506 TYR HA H N N 507 TYR HB2 H N N 508 TYR HB3 H N N 509 TYR HD1 H N N 510 TYR HD2 H N N 511 TYR HE1 H N N 512 TYR HE2 H N N 513 TYR HH H N N 514 TYR HXT H N N 515 VAL N N N N 516 VAL CA C N S 517 VAL C C N N 518 VAL O O N N 519 VAL CB C N N 520 VAL CG1 C N N 521 VAL CG2 C N N 522 VAL OXT O N N 523 VAL H H N N 524 VAL H2 H N N 525 VAL HA H N N 526 VAL HB H N N 527 VAL HG11 H N N 528 VAL HG12 H N N 529 VAL HG13 H N N 530 VAL HG21 H N N 531 VAL HG22 H N N 532 VAL HG23 H N N 533 VAL HXT H N N 534 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8D8M 'double helix' 8D8M 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 31 1_555 -0.718 -0.759 0.859 -17.554 -10.254 -10.627 1 A_DC3:DG33_B A 3 ? B 33 ? 22 1 1 A DC 3 1_555 B DG 30 1_555 -0.148 -0.234 0.717 -17.778 -5.328 -13.568 2 A_DC4:DG32_B A 4 ? B 32 ? 19 1 1 A DG 4 1_555 B DC 29 1_555 0.231 -0.031 0.159 1.084 -3.336 -2.875 3 A_DG5:DC31_B A 5 ? B 31 ? 19 1 1 A DG 5 1_555 B DC 28 1_555 0.500 -0.253 -0.128 -0.347 -1.939 -6.688 4 A_DG6:DC30_B A 6 ? B 30 ? 19 1 1 A DA 6 1_555 B DT 27 1_555 0.186 0.167 0.195 8.921 -0.166 1.069 5 A_DA7:DT29_B A 7 ? B 29 ? 20 1 1 A DC 7 1_555 B DG 26 1_555 0.294 0.007 0.304 8.996 -14.857 3.325 6 A_DC8:DG28_B A 8 ? B 28 ? 19 1 1 A DC 8 1_555 B DG 25 1_555 -0.091 0.348 0.444 -14.881 -16.244 5.186 7 A_DC9:DG27_B A 9 ? B 27 ? 19 1 1 A DT 9 1_555 B DA 24 1_555 -0.135 0.119 1.005 -18.981 -10.868 3.489 8 A_DT10:DA26_B A 10 ? B 26 ? 20 1 1 A DG 10 1_555 B DC 23 1_555 0.042 -0.131 -0.113 -7.558 -3.852 -8.002 9 A_DG11:DC25_B A 11 ? B 25 ? 19 1 1 A DT 11 1_555 B DA 22 1_555 0.013 -0.088 0.234 5.577 -2.086 -0.620 10 A_DT12:DA24_B A 12 ? B 24 ? 20 1 1 A DG 12 1_555 B DC 21 1_555 -0.301 0.053 -0.081 -0.450 -3.332 3.741 11 A_DG13:DC23_B A 13 ? B 23 ? 19 1 1 A DA 13 1_555 B DT 20 1_555 -0.041 0.018 0.189 4.108 -3.010 12.915 12 A_DA14:DT22_B A 14 ? B 22 ? 20 1 1 A DC 14 1_555 B DG 19 1_555 0.211 -0.043 0.326 7.227 -7.034 3.087 13 A_DC15:DG21_B A 15 ? B 21 ? 19 1 1 A DA 15 1_555 B DT 18 1_555 0.059 -0.134 0.165 7.142 -13.743 3.852 14 A_DA16:DT20_B A 16 ? B 20 ? 20 1 1 A DA 16 1_555 B DT 17 1_555 0.233 -0.052 -0.225 0.633 -16.837 2.715 15 A_DA17:DT19_B A 17 ? B 19 ? 20 1 1 A DA 17 1_555 B DT 16 1_555 0.023 0.055 0.087 -4.927 -8.144 4.082 16 A_DA18:DT18_B A 18 ? B 18 ? 20 1 1 A DT 18 1_555 B DA 15 1_555 -0.561 -0.022 0.349 -1.824 -7.335 -3.533 17 A_DT19:DA17_B A 19 ? B 17 ? 20 1 1 A DT 19 1_555 B DA 14 1_555 -0.193 -0.217 0.138 -8.342 -17.630 3.901 18 A_DT20:DA16_B A 20 ? B 16 ? 20 1 1 A DG 20 1_555 B DC 13 1_555 -0.681 -0.044 0.116 15.638 0.482 0.989 19 A_DG21:DC15_B A 21 ? B 15 ? 19 1 1 A DC 21 1_555 B DG 12 1_555 -0.144 -0.048 -0.293 17.501 -3.306 1.951 20 A_DC22:DG14_B A 22 ? B 14 ? 19 1 1 A DC 22 1_555 B DG 11 1_555 -0.112 -0.195 -0.402 10.549 -4.258 -5.182 21 A_DC23:DG13_B A 23 ? B 13 ? 19 1 1 A DC 23 1_555 B DG 10 1_555 0.143 -0.257 -0.208 7.631 -2.401 1.120 22 A_DC24:DG12_B A 24 ? B 12 ? 19 1 1 A DT 24 1_555 B DA 9 1_555 0.146 -0.091 -0.277 1.815 -3.434 4.970 23 A_DT25:DA11_B A 25 ? B 11 ? 20 1 1 A DC 25 1_555 B DG 8 1_555 -0.345 0.071 -0.152 0.795 -1.016 1.333 24 A_DC26:DG10_B A 26 ? B 10 ? 19 1 1 A DA 26 1_555 B DT 7 1_555 0.239 -0.150 0.439 6.763 -4.203 2.747 25 A_DA27:DT9_B A 27 ? B 9 ? 20 1 1 A DG 27 1_555 B DC 6 1_555 -0.042 -0.103 -0.046 -2.937 -10.699 2.376 26 A_DG28:DC8_B A 28 ? B 8 ? 19 1 1 A DA 28 1_555 B DT 5 1_555 0.130 0.202 0.053 0.138 -4.664 4.908 27 A_DA29:DT7_B A 29 ? B 7 ? 20 1 1 A DC 29 1_555 B DG 4 1_555 0.035 0.215 0.070 1.443 -3.234 8.890 28 A_DC30:DG6_B A 30 ? B 6 ? 19 1 1 A DG 30 1_555 B DC 3 1_555 -0.537 0.049 0.090 4.299 -4.825 3.524 29 A_DG31:DC5_B A 31 ? B 5 ? 19 1 1 A DG 31 1_555 B DC 2 1_555 1.423 0.887 0.043 11.277 -10.888 1.894 30 A_DG32:DC4_B A 32 ? B 4 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 31 1_555 A DC 3 1_555 B DG 30 1_555 -0.734 -0.410 3.256 0.312 0.772 37.547 -0.737 1.180 3.241 1.200 -0.485 37.556 1 AA_DC3DC4:DG32DG33_BB A 3 ? B 33 ? A 4 ? B 32 ? 1 A DC 3 1_555 B DG 30 1_555 A DG 4 1_555 B DC 29 1_555 0.357 0.734 2.989 3.550 -0.879 37.356 1.246 -0.131 2.992 -1.368 -5.526 37.529 2 AA_DC4DG5:DC31DG32_BB A 4 ? B 32 ? A 5 ? B 31 ? 1 A DG 4 1_555 B DC 29 1_555 A DG 5 1_555 B DC 28 1_555 0.019 0.077 3.446 1.875 0.115 35.519 0.108 0.257 3.443 0.189 -3.071 35.567 3 AA_DG5DG6:DC30DC31_BB A 5 ? B 31 ? A 6 ? B 30 ? 1 A DG 5 1_555 B DC 28 1_555 A DA 6 1_555 B DT 27 1_555 0.390 -0.083 3.133 -1.568 3.491 32.899 -0.706 -0.936 3.087 6.138 2.757 33.114 4 AA_DG6DA7:DT29DC30_BB A 6 ? B 30 ? A 7 ? B 29 ? 1 A DA 6 1_555 B DT 27 1_555 A DC 7 1_555 B DG 26 1_555 0.828 -1.282 3.235 0.990 3.139 30.938 -2.976 -1.359 3.117 5.863 -1.848 31.108 5 AA_DA7DC8:DG28DT29_BB A 7 ? B 29 ? A 8 ? B 28 ? 1 A DC 7 1_555 B DG 26 1_555 A DC 8 1_555 B DG 25 1_555 0.784 -1.223 3.435 6.040 11.322 35.344 -3.404 -0.416 3.007 17.934 -9.567 37.532 6 AA_DC8DC9:DG27DG28_BB A 8 ? B 28 ? A 9 ? B 27 ? 1 A DC 8 1_555 B DG 25 1_555 A DT 9 1_555 B DA 24 1_555 -0.356 -0.949 3.558 -2.024 4.179 30.855 -2.617 0.249 3.419 7.800 3.778 31.194 7 AA_DC9DT10:DA26DG27_BB A 9 ? B 27 ? A 10 ? B 26 ? 1 A DT 9 1_555 B DA 24 1_555 A DG 10 1_555 B DC 23 1_555 -0.502 -0.589 3.113 7.488 8.575 34.944 -2.013 1.738 2.736 13.833 -12.080 36.697 8 AA_DT10DG11:DC25DA26_BB A 10 ? B 26 ? A 11 ? B 25 ? 1 A DG 10 1_555 B DC 23 1_555 A DT 11 1_555 B DA 22 1_555 0.004 -0.777 3.180 -4.220 -1.399 29.146 -1.234 -0.888 3.180 -2.760 8.324 29.475 9 AA_DG11DT12:DA24DC25_BB A 11 ? B 25 ? A 12 ? B 24 ? 1 A DT 11 1_555 B DA 22 1_555 A DG 12 1_555 B DC 21 1_555 0.173 0.361 3.385 1.842 4.977 40.442 -0.054 -0.036 3.408 7.163 -2.651 40.774 10 AA_DT12DG13:DC23DA24_BB A 12 ? B 24 ? A 13 ? B 23 ? 1 A DG 12 1_555 B DC 21 1_555 A DA 13 1_555 B DT 20 1_555 -0.112 -0.245 3.238 -5.899 4.926 29.808 -1.414 -0.930 3.123 9.380 11.235 30.761 11 AA_DG13DA14:DT22DC23_BB A 13 ? B 23 ? A 14 ? B 22 ? 1 A DA 13 1_555 B DT 20 1_555 A DC 14 1_555 B DG 19 1_555 -0.590 -0.567 3.361 -3.056 3.389 30.346 -1.757 0.497 3.321 6.428 5.797 30.680 12 AA_DA14DC15:DG21DT22_BB A 14 ? B 22 ? A 15 ? B 21 ? 1 A DC 14 1_555 B DG 19 1_555 A DA 15 1_555 B DT 18 1_555 -0.192 -0.322 3.314 -1.266 0.272 38.522 -0.522 0.133 3.316 0.412 1.918 38.543 13 AA_DC15DA16:DT20DG21_BB A 15 ? B 21 ? A 16 ? B 20 ? 1 A DA 15 1_555 B DT 18 1_555 A DA 16 1_555 B DT 17 1_555 -0.246 -0.050 3.477 3.410 -2.765 38.046 0.291 0.828 3.438 -4.224 -5.209 38.289 14 AA_DA16DA17:DT19DT20_BB A 16 ? B 20 ? A 17 ? B 19 ? 1 A DA 16 1_555 B DT 17 1_555 A DA 17 1_555 B DT 16 1_555 0.308 -0.334 3.357 -3.395 -1.928 35.071 -0.258 -1.024 3.326 -3.188 5.613 35.280 15 AA_DA17DA18:DT18DT19_BB A 17 ? B 19 ? A 18 ? B 18 ? 1 A DA 17 1_555 B DT 16 1_555 A DT 18 1_555 B DA 15 1_555 -0.331 -0.829 3.315 -0.909 -3.814 32.946 -0.793 0.422 3.394 -6.695 1.595 33.172 16 AA_DA18DT19:DA17DT18_BB A 18 ? B 18 ? A 19 ? B 17 ? 1 A DT 18 1_555 B DA 15 1_555 A DT 19 1_555 B DA 14 1_555 0.351 -0.016 3.340 4.065 -2.525 40.459 0.264 -0.042 3.353 -3.636 -5.853 40.730 17 AA_DT19DT20:DA16DA17_BB A 19 ? B 17 ? A 20 ? B 16 ? 1 A DT 19 1_555 B DA 14 1_555 A DG 20 1_555 B DC 13 1_555 0.472 1.288 3.021 -2.064 4.180 30.756 1.647 -1.254 3.127 7.824 3.864 31.099 18 AA_DT20DG21:DC15DA16_BB A 20 ? B 16 ? A 21 ? B 15 ? 1 A DG 20 1_555 B DC 13 1_555 A DC 21 1_555 B DG 12 1_555 0.486 -1.376 3.351 0.005 2.683 37.611 -2.481 -0.751 3.249 4.155 -0.007 37.703 19 AA_DG21DC22:DG14DC15_BB A 21 ? B 15 ? A 22 ? B 14 ? 1 A DC 21 1_555 B DG 12 1_555 A DC 22 1_555 B DG 11 1_555 -0.723 -1.492 3.680 -0.734 4.771 24.880 -4.902 1.419 3.359 10.942 1.683 25.336 20 AA_DC22DC23:DG13DG14_BB A 22 ? B 14 ? A 23 ? B 13 ? 1 A DC 22 1_555 B DG 11 1_555 A DC 23 1_555 B DG 10 1_555 0.290 -0.904 3.524 -1.128 6.340 35.328 -2.422 -0.641 3.307 10.341 1.839 35.892 21 AA_DC23DC24:DG12DG13_BB A 23 ? B 13 ? A 24 ? B 12 ? 1 A DC 23 1_555 B DG 10 1_555 A DT 24 1_555 B DA 9 1_555 -0.300 -1.013 3.477 1.803 5.008 32.904 -2.632 0.835 3.271 8.770 -3.157 33.320 22 AA_DC24DT25:DA11DG12_BB A 24 ? B 12 ? A 25 ? B 11 ? 1 A DT 24 1_555 B DA 9 1_555 A DC 25 1_555 B DG 8 1_555 0.633 0.206 3.379 2.898 1.618 31.460 0.066 -0.603 3.428 2.973 -5.327 31.630 23 AA_DT25DC26:DG10DA11_BB A 25 ? B 11 ? A 26 ? B 10 ? 1 A DC 25 1_555 B DG 8 1_555 A DA 26 1_555 B DT 7 1_555 -0.703 0.613 3.297 -5.312 1.552 36.240 0.757 0.369 3.386 2.477 8.480 36.646 24 AA_DC26DA27:DT9DG10_BB A 26 ? B 10 ? A 27 ? B 9 ? 1 A DA 26 1_555 B DT 7 1_555 A DG 27 1_555 B DC 6 1_555 -1.082 -0.610 3.426 -2.951 3.390 38.178 -1.370 1.257 3.432 5.160 4.492 38.432 25 AA_DA27DG28:DC8DT9_BB A 27 ? B 9 ? A 28 ? B 8 ? 1 A DG 27 1_555 B DC 6 1_555 A DA 28 1_555 B DT 5 1_555 0.031 0.379 3.173 -1.957 2.370 37.971 0.288 -0.288 3.185 3.636 3.002 38.090 26 AA_DG28DA29:DT7DC8_BB A 28 ? B 8 ? A 29 ? B 7 ? 1 A DA 28 1_555 B DT 5 1_555 A DC 29 1_555 B DG 4 1_555 0.194 -0.209 3.448 0.590 1.086 27.471 -0.720 -0.255 3.441 2.285 -1.241 27.498 27 AA_DA29DC30:DG6DT7_BB A 29 ? B 7 ? A 30 ? B 6 ? 1 A DC 29 1_555 B DG 4 1_555 A DG 30 1_555 B DC 3 1_555 0.163 1.277 3.313 3.414 -1.177 38.558 2.072 0.176 3.277 -1.778 -5.156 38.721 28 AA_DC30DG31:DC5DG6_BB A 30 ? B 6 ? A 31 ? B 5 ? 1 A DG 30 1_555 B DC 3 1_555 A DG 31 1_555 B DC 2 1_555 0.418 1.205 3.132 2.907 1.994 41.039 1.505 -0.289 3.206 2.838 -4.137 41.184 29 AA_DG31DG32:DC4DC5_BB A 31 ? B 5 ? A 32 ? B 4 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 2003748 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'CALCIUM ION' CA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7U6K _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'I 2 2 2' _space_group.name_Hall 'I 2 2' _space_group.IT_number 23 _space_group.crystal_system orthorhombic _space_group.id 1 #