HEADER ELECTRON TRANSPORT, PROTEIN FIBRIL 10-JUN-22 8D9M TITLE CRYO-EM OF THE OMCZ NANOWIRES FROM GEOBACTER SULFURREDUCENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OMCZ SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; SOURCE 3 ORGANISM_TAXID: 35554; SOURCE 4 STRAIN: ATCC 51573 / DSM 12127 / PCA KEYWDS HELICAL SYMMETRY, CYTOCHROME NANOWIRE, FILAMENT, ELECTRON TRANSPORT, KEYWDS 2 PROTEIN FIBRIL EXPDTA ELECTRON MICROSCOPY AUTHOR F.WANG,C.H.CHAN,K.MUSTAFA,A.I.HOCHBAUM,D.R.BOND,E.H.EGELMAN REVDAT 1 14-SEP-22 8D9M 0 JRNL AUTH F.WANG,C.H.CHAN,V.SUCIU,K.MUSTAFA,M.AMMEND,D.SI, JRNL AUTH 2 A.I.HOCHBAUM,E.H.EGELMAN,D.R.BOND JRNL TITL STRUCTURE OF GEOBACTER OMCZ FILAMENTS SUGGESTS EXTRACELLULAR JRNL TITL 2 CYTOCHROME POLYMERS EVOLVED INDEPENDENTLY MULTIPLE TIMES. JRNL REF ELIFE V. 11 2022 JRNL REFN ESSN 2050-084X JRNL PMID 36062910 JRNL DOI 10.7554/ELIFE.81551 REMARK 2 REMARK 2 RESOLUTION. 4.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.200 REMARK 3 NUMBER OF PARTICLES : 92170 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8D9M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000266286. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : FILAMENT OF OMCZ PROTEIN REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 10.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = -158.20 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 58.10 ANGSTROMS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 -0.416281 -0.909236 0.000000 0.00000 REMARK 350 BIOMT2 1 0.909236 -0.416281 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 -174.30000 REMARK 350 BIOMT1 2 0.724172 0.689620 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.689620 0.724172 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -116.20000 REMARK 350 BIOMT1 3 -0.928486 -0.371368 0.000000 0.00000 REMARK 350 BIOMT2 3 0.371368 -0.928486 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -58.10000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -0.928486 0.371368 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.371368 -0.928486 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 58.10000 REMARK 350 BIOMT1 6 0.724172 -0.689620 0.000000 0.00000 REMARK 350 BIOMT2 6 0.689620 0.724172 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 116.20000 REMARK 350 BIOMT1 7 -0.416281 0.909236 0.000000 0.00000 REMARK 350 BIOMT2 7 -0.909236 -0.416281 0.000000 0.00000 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 174.30000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 4 REMARK 465 VAL A 5 REMARK 465 LEU A 6 REMARK 465 ILE A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 VAL A 14 REMARK 465 VAL A 15 REMARK 465 LEU A 16 REMARK 465 THR A 17 REMARK 465 GLY A 18 REMARK 465 ALA A 19 REMARK 465 ALA A 20 REMARK 465 MET A 21 REMARK 465 VAL A 22 REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 ALA A 25 REMARK 465 VAL A 26 REMARK 465 PRO A 285 REMARK 465 TYR A 286 REMARK 465 THR A 287 REMARK 465 ASN A 288 REMARK 465 ALA A 289 REMARK 465 THR A 290 REMARK 465 VAL A 291 REMARK 465 PRO A 292 REMARK 465 ALA A 293 REMARK 465 ILE A 294 REMARK 465 ASN A 295 REMARK 465 GLY A 296 REMARK 465 GLN A 297 REMARK 465 SER A 298 REMARK 465 SER A 299 REMARK 465 TYR A 300 REMARK 465 THR A 301 REMARK 465 VAL A 302 REMARK 465 THR A 303 REMARK 465 ALA A 304 REMARK 465 GLY A 305 REMARK 465 LYS A 306 REMARK 465 GLU A 307 REMARK 465 ALA A 308 REMARK 465 VAL A 309 REMARK 465 LEU A 310 REMARK 465 THR A 311 REMARK 465 ILE A 312 REMARK 465 VAL A 313 REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 SER A 316 REMARK 465 PHE A 317 REMARK 465 VAL A 318 REMARK 465 ASN A 319 REMARK 465 VAL A 320 REMARK 465 GLY A 321 REMARK 465 PRO A 322 REMARK 465 ASP A 323 REMARK 465 GLY A 324 REMARK 465 VAL A 325 REMARK 465 THR A 326 REMARK 465 THR A 327 REMARK 465 TYR A 328 REMARK 465 GLN A 329 REMARK 465 PRO A 330 REMARK 465 THR A 331 REMARK 465 VAL A 332 REMARK 465 ALA A 333 REMARK 465 LEU A 334 REMARK 465 VAL A 335 REMARK 465 SER A 336 REMARK 465 GLY A 337 REMARK 465 SER A 338 REMARK 465 THR A 339 REMARK 465 SER A 340 REMARK 465 LEU A 341 REMARK 465 THR A 342 REMARK 465 LEU A 343 REMARK 465 THR A 344 REMARK 465 PRO A 345 REMARK 465 PHE A 346 REMARK 465 SER A 347 REMARK 465 VAL A 348 REMARK 465 THR A 349 REMARK 465 GLU A 350 REMARK 465 SER A 351 REMARK 465 GLU A 352 REMARK 465 ILE A 353 REMARK 465 LYS A 354 REMARK 465 VAL A 355 REMARK 465 SER A 356 REMARK 465 VAL A 357 REMARK 465 PRO A 358 REMARK 465 ALA A 359 REMARK 465 LEU A 360 REMARK 465 VAL A 361 REMARK 465 GLU A 362 REMARK 465 GLY A 363 REMARK 465 VAL A 364 REMARK 465 TYR A 365 REMARK 465 GLU A 366 REMARK 465 LEU A 367 REMARK 465 ARG A 368 REMARK 465 ILE A 369 REMARK 465 THR A 370 REMARK 465 LYS A 371 REMARK 465 ALA A 372 REMARK 465 ASN A 373 REMARK 465 LYS A 374 REMARK 465 VAL A 375 REMARK 465 SER A 376 REMARK 465 ASN A 377 REMARK 465 LEU A 378 REMARK 465 ALA A 379 REMARK 465 LYS A 380 REMARK 465 LEU A 381 REMARK 465 THR A 382 REMARK 465 VAL A 383 REMARK 465 ALA A 384 REMARK 465 PRO A 385 REMARK 465 ALA A 386 REMARK 465 ARG A 387 REMARK 465 ILE A 388 REMARK 465 ILE A 389 REMARK 465 ALA A 390 REMARK 465 SER A 391 REMARK 465 ALA A 392 REMARK 465 THR A 393 REMARK 465 LEU A 394 REMARK 465 ALA A 395 REMARK 465 THR A 396 REMARK 465 GLY A 397 REMARK 465 LYS A 398 REMARK 465 THR A 399 REMARK 465 LEU A 400 REMARK 465 THR A 401 REMARK 465 ILE A 402 REMARK 465 THR A 403 REMARK 465 GLY A 404 REMARK 465 THR A 405 REMARK 465 GLY A 406 REMARK 465 PHE A 407 REMARK 465 GLY A 408 REMARK 465 PRO A 409 REMARK 465 ALA A 410 REMARK 465 PRO A 411 REMARK 465 SER A 412 REMARK 465 SER A 413 REMARK 465 GLU A 414 REMARK 465 TYR A 415 REMARK 465 ASP A 416 REMARK 465 ALA A 417 REMARK 465 GLY A 418 REMARK 465 ILE A 419 REMARK 465 GLY A 420 REMARK 465 VAL A 421 REMARK 465 TYR A 422 REMARK 465 ALA A 423 REMARK 465 GLY A 424 REMARK 465 THR A 425 REMARK 465 THR A 426 REMARK 465 GLN A 427 REMARK 465 ALA A 428 REMARK 465 ASN A 429 REMARK 465 VAL A 430 REMARK 465 ILE A 431 REMARK 465 SER A 432 REMARK 465 TRP A 433 REMARK 465 SER A 434 REMARK 465 ASP A 435 REMARK 465 THR A 436 REMARK 465 LYS A 437 REMARK 465 VAL A 438 REMARK 465 VAL A 439 REMARK 465 ALA A 440 REMARK 465 THR A 441 REMARK 465 SER A 442 REMARK 465 PRO A 443 REMARK 465 ASP A 444 REMARK 465 PHE A 445 REMARK 465 ALA A 446 REMARK 465 THR A 447 REMARK 465 ASN A 448 REMARK 465 GLY A 449 REMARK 465 TYR A 450 REMARK 465 VAL A 451 REMARK 465 THR A 452 REMARK 465 VAL A 453 REMARK 465 LYS A 454 REMARK 465 THR A 455 REMARK 465 ILE A 456 REMARK 465 ASN A 457 REMARK 465 GLY A 458 REMARK 465 PRO A 459 REMARK 465 LEU A 460 REMARK 465 SER A 461 REMARK 465 GLY A 462 REMARK 465 LYS A 463 REMARK 465 ILE A 464 REMARK 465 LEU A 465 REMARK 465 ALA A 466 REMARK 465 ALA A 467 REMARK 465 PRO A 468 REMARK 465 LYS A 469 REMARK 465 LYS A 470 REMARK 465 VAL A 471 REMARK 465 LYS A 472 REMARK 465 ARG A 473 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS A 111 CAB HEC A 602 1.58 REMARK 500 CB CYS A 214 CAB HEC A 606 1.64 REMARK 500 CE1 HIS A 207 FE HEC A 606 1.68 REMARK 500 CB CYS A 131 CAB HEC A 604 1.96 REMARK 500 SG CYS A 272 CAB HEC A 608 2.00 REMARK 500 SG CYS A 50 CAB HEC A 603 2.04 REMARK 500 SG CYS A 275 CAC HEC A 608 2.05 REMARK 500 SG CYS A 217 CAC HEC A 606 2.08 REMARK 500 SG CYS A 134 C3C HEC A 604 2.12 REMARK 500 SG CYS A 53 CAC HEC A 603 2.13 REMARK 500 NE2 HIS A 54 ND HEC A 603 2.14 REMARK 500 NE2 HIS A 120 NB HEC A 603 2.15 REMARK 500 SG CYS A 111 CAB HEC A 602 2.15 REMARK 500 SG CYS A 131 CAB HEC A 604 2.16 REMARK 500 OG SER A 161 OE1 GLN A 176 2.16 REMARK 500 SG CYS A 77 CAB HEC A 601 2.17 REMARK 500 NE2 HIS A 207 NB HEC A 606 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 30 -167.03 -74.39 REMARK 500 TYR A 38 66.57 61.84 REMARK 500 ASP A 39 -6.83 -59.07 REMARK 500 CYS A 77 29.07 -140.18 REMARK 500 ASP A 130 51.27 -94.02 REMARK 500 LYS A 132 -9.52 75.93 REMARK 500 ARG A 163 -159.98 -149.26 REMARK 500 ALA A 167 -5.37 68.79 REMARK 500 GLU A 179 50.27 -90.37 REMARK 500 THR A 205 -60.31 -90.41 REMARK 500 GLU A 230 5.94 -69.79 REMARK 500 ASN A 240 44.33 -140.31 REMARK 500 SER A 278 -169.36 -73.25 REMARK 500 TRP A 279 62.03 60.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 29 PRO A 30 149.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 603 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 54 NE2 REMARK 620 2 HEC A 603 NA 102.3 REMARK 620 3 HEC A 603 NB 120.1 86.9 REMARK 620 4 HEC A 603 NC 80.3 177.3 91.0 REMARK 620 5 HEC A 603 ND 63.1 92.5 176.8 89.5 REMARK 620 6 HIS A 120 NE2 176.3 77.0 63.5 100.6 113.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 64 NE2 REMARK 620 2 HEC A 602 NA 79.0 REMARK 620 3 HEC A 602 NB 93.7 87.8 REMARK 620 4 HEC A 602 NC 103.9 177.0 91.2 REMARK 620 5 HEC A 602 ND 88.3 92.8 178.0 88.1 REMARK 620 6 HIS A 115 NE2 172.7 107.3 90.2 69.9 87.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 65 NE2 REMARK 620 2 HEC A 601 NA 81.9 REMARK 620 3 HEC A 601 NB 76.3 88.6 REMARK 620 4 HEC A 601 NC 97.2 178.4 90.0 REMARK 620 5 HEC A 601 ND 102.4 91.0 178.7 90.4 REMARK 620 6 HIS A 93 NE2 177.2 100.8 104.0 80.0 77.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 604 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 121 NE2 REMARK 620 2 HEC A 604 NA 76.6 REMARK 620 3 HEC A 604 NB 96.2 89.8 REMARK 620 4 HEC A 604 NC 99.2 175.7 89.9 REMARK 620 5 HEC A 604 ND 78.7 89.5 174.9 90.4 REMARK 620 6 HIS A 135 NE2 165.5 103.2 69.3 80.7 115.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 607 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 182 NE2 REMARK 620 2 HEC A 607 NA 105.4 REMARK 620 3 HEC A 607 NB 110.4 89.5 REMARK 620 4 HEC A 607 NC 77.6 177.0 89.2 REMARK 620 5 HEC A 607 ND 71.7 90.6 177.8 90.6 REMARK 620 6 HIS A 265 NE2 141.8 92.5 103.2 85.2 74.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 605 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 206 NE2 REMARK 620 2 HEC A 605 NA 111.4 REMARK 620 3 HEC A 605 NB 100.7 89.8 REMARK 620 4 HEC A 605 NC 67.1 177.2 88.2 REMARK 620 5 HEC A 605 ND 77.7 90.9 178.4 91.0 REMARK 620 6 HIS A 233 NE2 138.2 105.3 98.7 76.9 82.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 606 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 207 NE2 REMARK 620 2 HEC A 606 NA 108.1 REMARK 620 3 HEC A 606 NB 64.2 88.7 REMARK 620 4 HEC A 606 NC 70.5 178.2 89.6 REMARK 620 5 HEC A 606 ND 115.0 91.7 179.2 90.0 REMARK 620 6 HIS A 218 NE2 150.3 96.6 101.1 84.3 79.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 608 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 239 NE2 REMARK 620 2 HEC A 608 NA 103.5 REMARK 620 3 HEC A 608 NB 85.5 89.3 REMARK 620 4 HEC A 608 NC 80.0 176.3 89.8 REMARK 620 5 HEC A 608 ND 97.9 89.1 176.5 91.6 REMARK 620 6 HIS A 276 NE2 168.9 67.2 99.9 109.5 76.7 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-27266 RELATED DB: EMDB REMARK 900 CRYO-EM OF THE OMCZ NANOWIRES FROM GEOBACTER SULFURREDUCENS DBREF 8D9M A 1 473 UNP Q74BG5 Q74BG5_GEOSL 1 473 SEQRES 1 A 473 MET LYS LYS LYS VAL LEU ILE GLY ALA SER LEU ALA ALA SEQRES 2 A 473 VAL VAL LEU THR GLY ALA ALA MET VAL GLY ALA ALA VAL SEQRES 3 A 473 PRO PRO PRO PRO VAL ASN GLN PHE LEU GLY ILE TYR ASP SEQRES 4 A 473 THR LYS PHE PRO ASN LEU THR LYS ALA ASP CYS LEU GLU SEQRES 5 A 473 CYS HIS VAL SER ASP THR VAL LEU VAL GLN GLN HIS HIS SEQRES 6 A 473 ALA LEU ILE ASN THR VAL THR PRO PRO ALA SER CYS ILE SEQRES 7 A 473 ASN THR SER GLY THR VAL PRO PRO THR LEU ALA THR GLY SEQRES 8 A 473 CYS HIS VAL MET VAL PRO ASP GLY SER GLY GLY PHE THR SEQRES 9 A 473 PHE GLN ASP PHE ARG ASN CYS PHE ASN CYS HIS THR GLN SEQRES 10 A 473 THR PRO HIS HIS THR SER PRO ALA ALA VAL ALA LYS ASP SEQRES 11 A 473 CYS LYS TYR CYS HIS GLY ASN PHE ILE ASP ASN PRO LEU SEQRES 12 A 473 ASP GLY HIS TYR ILE PRO THR TYR SER ALA SER SER VAL SEQRES 13 A 473 THR PRO MET PRO SER GLY ARG SER VAL THR ALA THR ASP SEQRES 14 A 473 GLY ASN VAL VAL ILE VAL GLN GLY CYS GLU ALA CYS HIS SEQRES 15 A 473 GLN ALA ALA PRO ASN ALA ILE ASP PRO LYS THR ASN THR SEQRES 16 A 473 VAL ARG PRO ILE PHE SER ASN GLN ASP THR HIS HIS GLY SEQRES 17 A 473 THR GLY ILE THR ASP CYS ASN LEU CYS HIS ASN THR SER SEQRES 18 A 473 SER ASN VAL PRO ILE ARG GLN CYS GLU VAL CYS HIS GLY SEQRES 19 A 473 VAL ASN SER LEU HIS ASN ILE GLN LYS ASP SER PRO ASN SEQRES 20 A 473 ALA ALA ASN LEU GLY THR VAL LYS PRO GLY LEU GLU ASP SEQRES 21 A 473 LEU GLY TRP GLY HIS ILE GLY ASN ASN TRP ASP CYS GLN SEQRES 22 A 473 GLY CYS HIS TRP SER TRP PHE GLY ASN SER SER PRO TYR SEQRES 23 A 473 THR ASN ALA THR VAL PRO ALA ILE ASN GLY GLN SER SER SEQRES 24 A 473 TYR THR VAL THR ALA GLY LYS GLU ALA VAL LEU THR ILE SEQRES 25 A 473 VAL GLY SER SER PHE VAL ASN VAL GLY PRO ASP GLY VAL SEQRES 26 A 473 THR THR TYR GLN PRO THR VAL ALA LEU VAL SER GLY SER SEQRES 27 A 473 THR SER LEU THR LEU THR PRO PHE SER VAL THR GLU SER SEQRES 28 A 473 GLU ILE LYS VAL SER VAL PRO ALA LEU VAL GLU GLY VAL SEQRES 29 A 473 TYR GLU LEU ARG ILE THR LYS ALA ASN LYS VAL SER ASN SEQRES 30 A 473 LEU ALA LYS LEU THR VAL ALA PRO ALA ARG ILE ILE ALA SEQRES 31 A 473 SER ALA THR LEU ALA THR GLY LYS THR LEU THR ILE THR SEQRES 32 A 473 GLY THR GLY PHE GLY PRO ALA PRO SER SER GLU TYR ASP SEQRES 33 A 473 ALA GLY ILE GLY VAL TYR ALA GLY THR THR GLN ALA ASN SEQRES 34 A 473 VAL ILE SER TRP SER ASP THR LYS VAL VAL ALA THR SER SEQRES 35 A 473 PRO ASP PHE ALA THR ASN GLY TYR VAL THR VAL LYS THR SEQRES 36 A 473 ILE ASN GLY PRO LEU SER GLY LYS ILE LEU ALA ALA PRO SEQRES 37 A 473 LYS LYS VAL LYS ARG HET HEC A 601 43 HET HEC A 602 43 HET HEC A 603 43 HET HEC A 604 43 HET HEC A 605 43 HET HEC A 606 43 HET HEC A 607 43 HET HEC A 608 43 HETNAM HEC HEME C FORMUL 2 HEC 8(C34 H34 FE N4 O4) HELIX 1 AA1 ASP A 57 LEU A 67 1 11 HELIX 2 AA2 ILE A 68 VAL A 71 5 4 HELIX 3 AA3 SER A 123 ALA A 128 1 6 HELIX 4 AA4 SER A 201 HIS A 206 1 6 HELIX 5 AA5 VAL A 224 GLU A 230 1 7 HELIX 6 AA6 GLY A 234 HIS A 239 1 6 HELIX 7 AA7 ASN A 268 TRP A 277 1 10 SHEET 1 AA1 2 MET A 95 PRO A 97 0 SHEET 2 AA1 2 PHE A 103 PHE A 105 -1 O THR A 104 N VAL A 96 SHEET 1 AA2 2 ALA A 185 ILE A 189 0 SHEET 2 AA2 2 VAL A 196 ILE A 199 -1 O ARG A 197 N ALA A 188 LINK SG CYS A 92 CAC HEC A 601 1555 1555 1.94 LINK SG CYS A 114 CAC HEC A 602 1555 1555 1.90 LINK SG CYS A 134 CAC HEC A 604 1555 1555 1.94 LINK SG CYS A 178 CAB HEC A 607 1555 1555 1.85 LINK SG CYS A 181 CAC HEC A 607 1555 1555 1.90 LINK SG CYS A 229 CAB HEC A 605 1555 1555 1.89 LINK SG CYS A 232 CAC HEC A 605 1555 1555 1.90 LINK NE2 HIS A 54 FE HEC A 603 1555 1555 2.05 LINK NE2 HIS A 64 FE HEC A 602 1555 1555 2.06 LINK NE2 HIS A 65 FE HEC A 601 1555 1555 2.03 LINK NE2 HIS A 93 FE HEC A 601 1555 1555 2.04 LINK NE2 HIS A 115 FE HEC A 602 1555 1555 2.03 LINK NE2 HIS A 120 FE HEC A 603 1555 1555 2.03 LINK NE2 HIS A 121 FE HEC A 604 1555 1555 2.03 LINK NE2 HIS A 135 FE HEC A 604 1555 1555 2.08 LINK NE2 HIS A 182 FE HEC A 607 1555 1555 2.04 LINK NE2 HIS A 206 FE HEC A 605 1555 1555 2.02 LINK NE2 HIS A 207 FE HEC A 606 1555 1555 2.04 LINK NE2 HIS A 218 FE HEC A 606 1555 1555 2.03 LINK NE2 HIS A 233 FE HEC A 605 1555 1555 2.04 LINK NE2 HIS A 239 FE HEC A 608 1555 1555 2.04 LINK NE2 HIS A 265 FE HEC A 607 1555 1555 2.01 LINK NE2 HIS A 276 FE HEC A 608 1555 1555 1.99 CISPEP 1 THR A 72 PRO A 73 0 -4.49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000