HEADER PROTEIN BINDING 13-JUN-22 8DA6 TITLE COEVOLVED AFFIBODY-Z DOMAIN PAIR LL1.C5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IGG-BINDING PROTEIN A,STAPHYLOCOCCAL PROTEIN A,SPA; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: AFFIBODY LL1.FIIM; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN A; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: IGG-BINDING PROTEIN A,STAPHYLOCOCCAL PROTEIN A,SPA; COMPND 15 ENGINEERED: YES; COMPND 16 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: SPA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 14 ORGANISM_TAXID: 1280; SOURCE 15 GENE: SPA; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AFFIBODY, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR K.M.JUDE,A.YANG,K.C.GARCIA REVDAT 2 09-AUG-23 8DA6 1 JRNL REVDAT 1 26-JUL-23 8DA6 0 JRNL AUTH A.YANG,K.M.JUDE,B.LAI,M.MINOT,A.M.KOCYLA,C.R.GLASSMAN, JRNL AUTH 2 D.NISHIMIYA,Y.S.KIM,S.T.REDDY,A.A.KHAN,K.C.GARCIA JRNL TITL DEPLOYING SYNTHETIC COEVOLUTION AND MACHINE LEARNING TO JRNL TITL 2 ENGINEER PROTEIN-PROTEIN INTERACTIONS. JRNL REF SCIENCE V. 381 H1720 2023 JRNL REFN ESSN 1095-9203 JRNL PMID 37499032 JRNL DOI 10.1126/SCIENCE.ADH1720 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36170 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.520 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8000 - 3.6100 1.00 2640 155 0.1823 0.2153 REMARK 3 2 3.6100 - 2.8700 1.00 2496 145 0.2089 0.2437 REMARK 3 3 2.8700 - 2.5100 1.00 2477 145 0.2301 0.2529 REMARK 3 4 2.5100 - 2.2800 1.00 2449 143 0.2117 0.2628 REMARK 3 5 2.2800 - 2.1100 1.00 2446 142 0.2174 0.2451 REMARK 3 6 2.1100 - 1.9900 1.00 2422 142 0.2348 0.2890 REMARK 3 7 1.9900 - 1.8900 1.00 2420 141 0.2501 0.2788 REMARK 3 8 1.8900 - 1.8100 1.00 2405 140 0.2405 0.2773 REMARK 3 9 1.8100 - 1.7400 1.00 2425 142 0.2520 0.3044 REMARK 3 10 1.7400 - 1.6800 1.00 2396 139 0.2781 0.3347 REMARK 3 11 1.6800 - 1.6300 1.00 2412 142 0.3316 0.3091 REMARK 3 12 1.6300 - 1.5800 1.00 2416 141 0.3470 0.3959 REMARK 3 13 1.5800 - 1.5400 1.00 2392 140 0.3610 0.3897 REMARK 3 14 1.5400 - 1.5000 1.00 2378 139 0.3939 0.4043 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.218 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.224 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1836 REMARK 3 ANGLE : 0.922 2486 REMARK 3 CHIRALITY : 0.048 268 REMARK 3 PLANARITY : 0.007 336 REMARK 3 DIHEDRAL : 12.376 697 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6358 2.1246 94.4658 REMARK 3 T TENSOR REMARK 3 T11: 0.3895 T22: 0.3266 REMARK 3 T33: 0.4530 T12: -0.1341 REMARK 3 T13: 0.1029 T23: -0.0669 REMARK 3 L TENSOR REMARK 3 L11: 4.4395 L22: 6.1808 REMARK 3 L33: 6.6792 L12: 4.8882 REMARK 3 L13: 4.1735 L23: 3.4555 REMARK 3 S TENSOR REMARK 3 S11: -0.0717 S12: -0.0712 S13: -0.9770 REMARK 3 S21: 0.5005 S22: -0.0996 S23: -0.0081 REMARK 3 S31: 1.4949 S32: -0.0417 S33: 0.0362 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0590 14.1279 92.3001 REMARK 3 T TENSOR REMARK 3 T11: 0.1951 T22: 0.2692 REMARK 3 T33: 0.2864 T12: -0.0286 REMARK 3 T13: 0.0268 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 9.4392 L22: 7.0216 REMARK 3 L33: 5.0732 L12: 1.7835 REMARK 3 L13: 6.8122 L23: 2.2489 REMARK 3 S TENSOR REMARK 3 S11: -0.2363 S12: 0.1067 S13: 0.1810 REMARK 3 S21: -0.2215 S22: 0.2460 S23: 0.3632 REMARK 3 S31: -0.4045 S32: -0.3190 S33: 0.0119 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0088 9.5700 93.0769 REMARK 3 T TENSOR REMARK 3 T11: 0.2198 T22: 0.3062 REMARK 3 T33: 0.3237 T12: -0.0230 REMARK 3 T13: 0.0201 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 6.4432 L22: 7.5917 REMARK 3 L33: 3.3299 L12: 4.1550 REMARK 3 L13: 4.3009 L23: 3.2958 REMARK 3 S TENSOR REMARK 3 S11: -0.0930 S12: 0.3570 S13: -0.1102 REMARK 3 S21: -0.0118 S22: 0.1527 S23: -0.5250 REMARK 3 S31: 0.0693 S32: 0.4607 S33: -0.0849 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2020 9.2221 101.3909 REMARK 3 T TENSOR REMARK 3 T11: 0.2262 T22: 0.2984 REMARK 3 T33: 0.3245 T12: -0.0075 REMARK 3 T13: -0.0338 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 4.3325 L22: 5.2945 REMARK 3 L33: 4.6136 L12: -0.2184 REMARK 3 L13: -1.1009 L23: -2.4785 REMARK 3 S TENSOR REMARK 3 S11: 0.0700 S12: 0.2375 S13: 0.5373 REMARK 3 S21: -0.2463 S22: -0.1737 S23: 0.0302 REMARK 3 S31: -0.2221 S32: 0.3138 S33: 0.2228 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 30 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8968 7.5818 105.2912 REMARK 3 T TENSOR REMARK 3 T11: 0.2360 T22: 0.3403 REMARK 3 T33: 0.3422 T12: 0.0527 REMARK 3 T13: 0.0044 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 2.3255 L22: 2.9422 REMARK 3 L33: 9.7198 L12: 0.5182 REMARK 3 L13: -2.2333 L23: -3.0411 REMARK 3 S TENSOR REMARK 3 S11: -0.3406 S12: 0.0825 S13: 0.2654 REMARK 3 S21: 0.2918 S22: 0.2134 S23: 0.2060 REMARK 3 S31: -0.2901 S32: -0.5727 S33: 0.0950 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2909 33.1732 79.9913 REMARK 3 T TENSOR REMARK 3 T11: 0.3559 T22: 0.3997 REMARK 3 T33: 0.4025 T12: -0.1848 REMARK 3 T13: 0.0357 T23: -0.0627 REMARK 3 L TENSOR REMARK 3 L11: 5.8736 L22: 6.5832 REMARK 3 L33: 2.8637 L12: 4.3385 REMARK 3 L13: 4.0237 L23: 2.9779 REMARK 3 S TENSOR REMARK 3 S11: -0.2738 S12: 0.4062 S13: 0.1657 REMARK 3 S21: -0.1544 S22: 0.5008 S23: -0.7202 REMARK 3 S31: -0.6428 S32: 0.8814 S33: -0.2352 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 24 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4609 30.3367 86.4906 REMARK 3 T TENSOR REMARK 3 T11: 0.3679 T22: 0.3358 REMARK 3 T33: 0.2833 T12: -0.1301 REMARK 3 T13: 0.0490 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 8.0912 L22: 8.6812 REMARK 3 L33: 5.0275 L12: 5.1459 REMARK 3 L13: 5.6169 L23: 5.9232 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: -0.6436 S13: 0.2910 REMARK 3 S21: 0.0776 S22: -0.2643 S23: 0.0468 REMARK 3 S31: -0.4544 S32: -0.1658 S33: 0.1453 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 38 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2486 21.5136 81.6740 REMARK 3 T TENSOR REMARK 3 T11: 0.2878 T22: 0.4055 REMARK 3 T33: 0.4424 T12: 0.0243 REMARK 3 T13: 0.0080 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 4.4493 L22: 7.4879 REMARK 3 L33: 3.7369 L12: 3.7450 REMARK 3 L13: 2.2867 L23: 3.2549 REMARK 3 S TENSOR REMARK 3 S11: 0.3172 S12: -0.1052 S13: -0.6144 REMARK 3 S21: 0.5521 S22: 0.3454 S23: -0.5893 REMARK 3 S31: 0.6993 S32: 1.0498 S33: -0.6074 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9690 37.7736 79.1741 REMARK 3 T TENSOR REMARK 3 T11: 0.3703 T22: 0.3628 REMARK 3 T33: 0.5480 T12: -0.0276 REMARK 3 T13: 0.0515 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 6.3096 L22: 9.3363 REMARK 3 L33: 2.4248 L12: 0.1092 REMARK 3 L13: -3.3773 L23: -1.8007 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: -0.6207 S13: 0.6341 REMARK 3 S21: 0.7262 S22: 0.3437 S23: 1.1354 REMARK 3 S31: -0.2161 S32: 0.1150 S33: -0.3790 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 18 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.4245 39.0469 69.0628 REMARK 3 T TENSOR REMARK 3 T11: 0.3208 T22: 0.1770 REMARK 3 T33: 0.3283 T12: 0.0179 REMARK 3 T13: 0.0467 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 9.9554 L22: 1.7451 REMARK 3 L33: 5.1789 L12: 1.8643 REMARK 3 L13: 0.5756 L23: -0.4841 REMARK 3 S TENSOR REMARK 3 S11: 0.2773 S12: -0.0018 S13: -0.3459 REMARK 3 S21: 0.0781 S22: -0.3723 S23: -0.0874 REMARK 3 S31: 0.3912 S32: 0.0092 S33: 0.0856 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 30 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4837 45.0706 72.7801 REMARK 3 T TENSOR REMARK 3 T11: 0.4328 T22: 0.2765 REMARK 3 T33: 0.3580 T12: 0.0431 REMARK 3 T13: 0.0832 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 3.1440 L22: 0.4944 REMARK 3 L33: 6.4755 L12: 0.7342 REMARK 3 L13: -1.7136 L23: -1.7236 REMARK 3 S TENSOR REMARK 3 S11: 0.3874 S12: -0.1395 S13: 0.5295 REMARK 3 S21: 0.1705 S22: -0.0896 S23: 0.0901 REMARK 3 S31: -0.6882 S32: -0.8607 S33: -0.3642 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DA6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000266206. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.77488 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS, XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36176 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 35.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.06605 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 0.95 REMARK 200 R MERGE FOR SHELL (I) : 3.09000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.950 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5DJT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M AMMONIUM SULFATE 0.1 M CITRIC REMARK 280 ACID PH 5.0 CRYOPROTECTED WITH SODIUM MALONATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.50800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.40250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.05250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.40250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.50800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 21.05250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 0 REMARK 465 VAL A 1 REMARK 465 ASP A 2 REMARK 465 LEU A 59 REMARK 465 GLU A 60 REMARK 465 HIS A 61 REMARK 465 HIS A 62 REMARK 465 HIS A 63 REMARK 465 HIS A 64 REMARK 465 HIS A 65 REMARK 465 HIS A 66 REMARK 465 ALA B 0 REMARK 465 VAL B 1 REMARK 465 LEU B 59 REMARK 465 GLU B 60 REMARK 465 HIS B 61 REMARK 465 HIS B 62 REMARK 465 HIS B 63 REMARK 465 HIS B 64 REMARK 465 HIS B 65 REMARK 465 HIS B 66 REMARK 465 ALA C 0 REMARK 465 LEU C 59 REMARK 465 GLU C 60 REMARK 465 HIS C 61 REMARK 465 HIS C 62 REMARK 465 HIS C 63 REMARK 465 HIS C 64 REMARK 465 HIS C 65 REMARK 465 HIS C 66 REMARK 465 ALA D 0 REMARK 465 VAL D 1 REMARK 465 ASP D 2 REMARK 465 LEU D 59 REMARK 465 GLU D 60 REMARK 465 HIS D 61 REMARK 465 HIS D 62 REMARK 465 HIS D 63 REMARK 465 HIS D 64 REMARK 465 HIS D 65 REMARK 465 HIS D 66 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 ASP B 2 CG OD1 OD2 REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 LYS C 7 CG CD CE NZ REMARK 470 GLU C 8 CG CD OE1 OE2 REMARK 470 ASN D 3 CG OD1 ND2 REMARK 470 LYS D 50 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 37 87.65 -154.98 REMARK 500 ASP D 37 85.53 -154.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8DA3 RELATED DB: PDB REMARK 900 RELATED ID: 8DA4 RELATED DB: PDB REMARK 900 RELATED ID: 8DA5 RELATED DB: PDB REMARK 900 RELATED ID: 8DA7 RELATED DB: PDB REMARK 900 RELATED ID: 8DA8 RELATED DB: PDB REMARK 900 RELATED ID: 8DA9 RELATED DB: PDB REMARK 900 RELATED ID: 8DAA RELATED DB: PDB REMARK 900 RELATED ID: 8DAB RELATED DB: PDB REMARK 900 RELATED ID: 8DAC RELATED DB: PDB DBREF 8DA6 A 2 58 UNP P38507 SPA_STAAU 213 269 DBREF 8DA6 B 0 66 PDB 8DA6 8DA6 0 66 DBREF 8DA6 C 2 58 UNP P38507 SPA_STAAU 213 269 DBREF 8DA6 D 0 66 PDB 8DA6 8DA6 0 66 SEQADV 8DA6 ALA A 0 UNP P38507 EXPRESSION TAG SEQADV 8DA6 VAL A 1 UNP P38507 EXPRESSION TAG SEQADV 8DA6 PHE A 9 UNP P38507 GLN 220 ENGINEERED MUTATION SEQADV 8DA6 ILE A 13 UNP P38507 PHE 224 ENGINEERED MUTATION SEQADV 8DA6 ALA A 29 UNP P38507 GLY 240 ENGINEERED MUTATION SEQADV 8DA6 PHE A 31 UNP P38507 ILE 242 ENGINEERED MUTATION SEQADV 8DA6 LEU A 59 UNP P38507 EXPRESSION TAG SEQADV 8DA6 GLU A 60 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS A 61 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS A 62 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS A 63 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS A 64 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS A 65 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS A 66 UNP P38507 EXPRESSION TAG SEQADV 8DA6 ALA C 0 UNP P38507 EXPRESSION TAG SEQADV 8DA6 VAL C 1 UNP P38507 EXPRESSION TAG SEQADV 8DA6 PHE C 9 UNP P38507 GLN 220 ENGINEERED MUTATION SEQADV 8DA6 ILE C 13 UNP P38507 PHE 224 ENGINEERED MUTATION SEQADV 8DA6 ALA C 29 UNP P38507 GLY 240 ENGINEERED MUTATION SEQADV 8DA6 PHE C 31 UNP P38507 ILE 242 ENGINEERED MUTATION SEQADV 8DA6 LEU C 59 UNP P38507 EXPRESSION TAG SEQADV 8DA6 GLU C 60 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS C 61 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS C 62 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS C 63 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS C 64 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS C 65 UNP P38507 EXPRESSION TAG SEQADV 8DA6 HIS C 66 UNP P38507 EXPRESSION TAG SEQRES 1 A 67 ALA VAL ASP ASN LYS PHE ASN LYS GLU PHE GLN ASN ALA SEQRES 2 A 67 ILE TYR GLU ILE LEU HIS LEU PRO ASN LEU ASN GLU GLU SEQRES 3 A 67 GLN ARG ASN ALA PHE PHE GLN SER LEU MLY ASP ASP PRO SEQRES 4 A 67 SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS LEU SEQRES 5 A 67 ASN ASP ALA GLN ALA PRO LYS LEU GLU HIS HIS HIS HIS SEQRES 6 A 67 HIS HIS SEQRES 1 B 67 ALA VAL ASP ASN LYS PHE ASN LYS GLU PHE SER VAL ALA SEQRES 2 B 67 GLY ARG GLU ILE ILE THR LEU PRO ASN LEU ASN ASP PRO SEQRES 3 B 67 GLN MLY MLY ALA PHE ILE MET SER LEU TRP ASP ASP PRO SEQRES 4 B 67 SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS LEU SEQRES 5 B 67 ASN ASP ALA GLN ALA PRO MLY LEU GLU HIS HIS HIS HIS SEQRES 6 B 67 HIS HIS SEQRES 1 C 67 ALA VAL ASP ASN LYS PHE ASN LYS GLU PHE GLN ASN ALA SEQRES 2 C 67 ILE TYR GLU ILE LEU HIS LEU PRO ASN LEU ASN GLU GLU SEQRES 3 C 67 GLN ARG ASN ALA PHE PHE GLN SER LEU LYS ASP ASP PRO SEQRES 4 C 67 SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS LEU SEQRES 5 C 67 ASN ASP ALA GLN ALA PRO LYS LEU GLU HIS HIS HIS HIS SEQRES 6 C 67 HIS HIS SEQRES 1 D 67 ALA VAL ASP ASN LYS PHE ASN LYS GLU PHE SER VAL ALA SEQRES 2 D 67 GLY ARG GLU ILE ILE THR LEU PRO ASN LEU ASN ASP PRO SEQRES 3 D 67 GLN MLY MLY ALA PHE ILE MET SER LEU TRP ASP ASP PRO SEQRES 4 D 67 SER GLN SER ALA ASN LEU LEU ALA GLU ALA LYS LYS LEU SEQRES 5 D 67 ASN ASP ALA GLN ALA PRO MLY LEU GLU HIS HIS HIS HIS SEQRES 6 D 67 HIS HIS MODRES 8DA6 MLY A 35 LYS MODIFIED RESIDUE HET MLY A 35 11 HET MLY B 27 11 HET MLY B 28 11 HET MLY B 58 11 HET MLY D 27 11 HET MLY D 28 11 HET MLY D 58 11 HETNAM MLY N-DIMETHYL-LYSINE FORMUL 1 MLY 7(C8 H18 N2 O2) FORMUL 5 HOH *112(H2 O) HELIX 1 AA1 ASN A 6 LEU A 19 1 14 HELIX 2 AA2 ASN A 23 ASP A 37 1 15 HELIX 3 AA3 GLN A 40 GLN A 55 1 16 HELIX 4 AA4 LYS B 7 THR B 18 1 12 HELIX 5 AA5 ASN B 23 ASP B 37 1 15 HELIX 6 AA6 GLN B 40 GLN B 55 1 16 HELIX 7 AA7 VAL C 1 PHE C 5 5 5 HELIX 8 AA8 ASN C 6 LEU C 19 1 14 HELIX 9 AA9 ASN C 23 ASP C 37 1 15 HELIX 10 AB1 GLN C 40 GLN C 55 1 16 HELIX 11 AB2 LYS D 4 THR D 18 1 15 HELIX 12 AB3 ASN D 23 ASP D 37 1 15 HELIX 13 AB4 GLN D 40 GLN D 55 1 16 LINK C LEU A 34 N MLY A 35 1555 1555 1.33 LINK C MLY A 35 N ASP A 36 1555 1555 1.34 LINK C GLN B 26 N MLY B 27 1555 1555 1.32 LINK C MLY B 27 N MLY B 28 1555 1555 1.32 LINK C MLY B 28 N ALA B 29 1555 1555 1.33 LINK C PRO B 57 N MLY B 58 1555 1555 1.33 LINK C GLN D 26 N MLY D 27 1555 1555 1.33 LINK C MLY D 27 N MLY D 28 1555 1555 1.34 LINK C MLY D 28 N ALA D 29 1555 1555 1.33 LINK C PRO D 57 N MLY D 58 1555 1555 1.32 CRYST1 37.016 42.105 140.805 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027015 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007102 0.00000