HEADER HYDROLASE/INHIBITOR 19-JUN-22 8DE1 TITLE TEM-1 BETA-LACTAMASE A237Y MUTANT COVALENTLY BOUND TO AVIBACTAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE TEM; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: TEM-1; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: AN EXTRA GLYCINE AT THE N-TERMINUS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BLATEM-1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE, BETA-LACTAMASE, TEM, AVIBACTAM, HYDROLASE-INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.JI,S.G.BOXER,I.I.MATHEWS REVDAT 3 25-OCT-23 8DE1 1 REMARK REVDAT 2 22-MAR-23 8DE1 1 JRNL REVDAT 1 07-SEP-22 8DE1 0 JRNL AUTH Z.JI,J.KOZUCH,I.I.MATHEWS,C.S.DIERCKS,Y.SHAMSUDIN, JRNL AUTH 2 M.A.SCHULZ,S.G.BOXER JRNL TITL PROTEIN ELECTRIC FIELDS ENABLE FASTER AND LONGER-LASTING JRNL TITL 2 COVALENT INHIBITION OF BETA-LACTAMASES. JRNL REF J.AM.CHEM.SOC. V. 144 20947 2022 JRNL REFN ESSN 1520-5126 JRNL PMID 36324090 JRNL DOI 10.1021/JACS.2C09876 REMARK 2 REMARK 2 RESOLUTION. 1.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.56 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.890 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 135091 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 6817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3000 - 4.2300 0.95 6611 342 0.1902 0.1946 REMARK 3 2 4.2300 - 3.3600 0.95 6470 346 0.1852 0.2083 REMARK 3 3 3.3600 - 2.9400 0.95 6504 348 0.2127 0.2194 REMARK 3 4 2.9400 - 2.6700 0.95 6466 340 0.2309 0.2446 REMARK 3 5 2.6700 - 2.4800 0.95 6456 339 0.2425 0.2825 REMARK 3 6 2.4800 - 2.3300 0.95 6429 339 0.2510 0.2576 REMARK 3 7 2.3300 - 2.2100 0.95 6486 338 0.2640 0.2735 REMARK 3 8 2.2100 - 2.1200 0.95 6421 342 0.2744 0.2702 REMARK 3 9 2.1200 - 2.0400 0.95 6407 332 0.2769 0.2961 REMARK 3 10 2.0400 - 1.9700 0.95 6437 336 0.2879 0.3215 REMARK 3 11 1.9700 - 1.9000 0.95 6395 342 0.2888 0.2985 REMARK 3 12 1.9000 - 1.8500 0.95 6417 339 0.2945 0.3354 REMARK 3 13 1.8500 - 1.8000 0.94 6415 340 0.2960 0.3200 REMARK 3 14 1.8000 - 1.7600 0.94 6377 334 0.3035 0.3211 REMARK 3 15 1.7600 - 1.7200 0.94 6395 327 0.3050 0.3136 REMARK 3 16 1.7200 - 1.6800 0.94 6369 335 0.3008 0.3046 REMARK 3 17 1.6800 - 1.6500 0.94 6353 336 0.3077 0.3112 REMARK 3 18 1.6500 - 1.6200 0.94 6348 342 0.3079 0.3137 REMARK 3 19 1.6200 - 1.5900 0.94 6377 325 0.3087 0.3412 REMARK 3 20 1.5900 - 1.5600 0.92 6217 319 0.3257 0.3410 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.7800 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 26 THROUGH 79 OR REMARK 3 RESID 81 OR RESID 83 THROUGH 110 OR RESID REMARK 3 112 THROUGH 191 OR RESID 193 THROUGH 288 REMARK 3 OR RESID 301)) REMARK 3 SELECTION : (CHAIN B AND (RESID 26 THROUGH 79 OR REMARK 3 RESID 81 OR RESID 83 THROUGH 110 OR RESID REMARK 3 112 THROUGH 191 OR RESID 193 THROUGH 288 REMARK 3 OR RESID 301)) REMARK 3 ATOM PAIRS NUMBER : 5007 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 26 THROUGH 79 OR REMARK 3 RESID 81 OR RESID 83 THROUGH 110 OR RESID REMARK 3 112 THROUGH 191 OR RESID 193 THROUGH 288 REMARK 3 OR RESID 301)) REMARK 3 SELECTION : (CHAIN C AND (RESID 26 THROUGH 79 OR REMARK 3 RESID 81 OR RESID 83 THROUGH 110 OR RESID REMARK 3 112 THROUGH 191 OR RESID 193 THROUGH 288 REMARK 3 OR RESID 301)) REMARK 3 ATOM PAIRS NUMBER : 5007 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 26 THROUGH 79 OR REMARK 3 RESID 81 OR RESID 83 THROUGH 110 OR RESID REMARK 3 112 THROUGH 191 OR RESID 193 THROUGH 288 REMARK 3 OR RESID 301)) REMARK 3 SELECTION : (CHAIN D AND (RESID 26 THROUGH 79 OR REMARK 3 RESID 81 OR RESID 83 THROUGH 110 OR RESID REMARK 3 112 THROUGH 191 OR RESID 193 THROUGH 288 REMARK 3 OR RESID 301)) REMARK 3 ATOM PAIRS NUMBER : 5007 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DE1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000264795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 135097 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.560 REMARK 200 RESOLUTION RANGE LOW (A) : 38.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.51 REMARK 200 R MERGE (I) : 0.20100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 12.65 REMARK 200 R MERGE FOR SHELL (I) : 1.82900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.590 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ERM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, HEPES (4-(2-HYDROXYETHYL)-1 REMARK 280 -PIPERAZINEETHANESULFONIC ACID), PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.78500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 25 REMARK 465 GLY B 25 REMARK 465 GLY C 25 REMARK 465 GLY D 25 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 70 N NXL A 301 2.14 REMARK 500 OG SER C 70 N NXL C 301 2.17 REMARK 500 O HOH A 550 O HOH A 626 2.19 REMARK 500 O HOH A 714 O HOH A 721 2.19 REMARK 500 O HOH A 627 O HOH C 638 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 69 -140.72 58.31 REMARK 500 TYR A 105 75.81 63.86 REMARK 500 LEU A 220 -122.11 -101.91 REMARK 500 MET B 69 -138.88 54.73 REMARK 500 ASN B 100 2.23 -69.04 REMARK 500 TYR B 105 77.85 55.61 REMARK 500 ASN B 175 -0.89 66.21 REMARK 500 LEU B 220 -122.40 -99.09 REMARK 500 SER B 256 -10.49 -144.35 REMARK 500 MET C 69 -138.23 56.18 REMARK 500 TYR C 105 75.52 56.94 REMARK 500 LEU C 220 -127.78 -99.52 REMARK 500 SER C 256 -10.56 -142.97 REMARK 500 MET D 69 -138.27 55.95 REMARK 500 TYR D 105 78.79 56.07 REMARK 500 LEU D 220 -124.58 -100.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 728 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 729 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH A 730 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH A 731 DISTANCE = 7.21 ANGSTROMS REMARK 525 HOH B 686 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH B 687 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH B 688 DISTANCE = 6.79 ANGSTROMS REMARK 525 HOH B 689 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH B 690 DISTANCE = 7.19 ANGSTROMS REMARK 525 HOH B 691 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH B 692 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH B 693 DISTANCE = 9.22 ANGSTROMS REMARK 525 HOH C 716 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH C 717 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH C 718 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH C 719 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH C 720 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH C 721 DISTANCE = 7.73 ANGSTROMS REMARK 525 HOH C 722 DISTANCE = 9.19 ANGSTROMS REMARK 525 HOH C 723 DISTANCE = 10.25 ANGSTROMS REMARK 525 HOH C 724 DISTANCE = 12.42 ANGSTROMS REMARK 525 HOH D 718 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH D 719 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH D 720 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH D 721 DISTANCE = 7.20 ANGSTROMS REMARK 525 HOH D 722 DISTANCE = 7.92 ANGSTROMS DBREF 8DE1 A 26 288 UNP P62593 BLAT_ECOLX 24 286 DBREF 8DE1 B 26 288 UNP P62593 BLAT_ECOLX 24 286 DBREF 8DE1 C 26 288 UNP P62593 BLAT_ECOLX 24 286 DBREF 8DE1 D 26 288 UNP P62593 BLAT_ECOLX 24 286 SEQADV 8DE1 GLY A 25 UNP P62593 EXPRESSION TAG SEQADV 8DE1 THR A 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 8DE1 TYR A 237 UNP P62593 ALA 235 ENGINEERED MUTATION SEQADV 8DE1 GLY B 25 UNP P62593 EXPRESSION TAG SEQADV 8DE1 THR B 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 8DE1 TYR B 237 UNP P62593 ALA 235 ENGINEERED MUTATION SEQADV 8DE1 GLY C 25 UNP P62593 EXPRESSION TAG SEQADV 8DE1 THR C 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 8DE1 TYR C 237 UNP P62593 ALA 235 ENGINEERED MUTATION SEQADV 8DE1 GLY D 25 UNP P62593 EXPRESSION TAG SEQADV 8DE1 THR D 182 UNP P62593 MET 180 ENGINEERED MUTATION SEQADV 8DE1 TYR D 237 UNP P62593 ALA 235 ENGINEERED MUTATION SEQRES 1 A 264 GLY HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU SEQRES 2 A 264 ASP GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP SEQRES 3 A 264 LEU ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU SEQRES 4 A 264 GLU ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU SEQRES 5 A 264 CYS GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU SEQRES 6 A 264 GLN LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU SEQRES 7 A 264 VAL GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP SEQRES 8 A 264 GLY MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR SEQRES 9 A 264 MET SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR SEQRES 10 A 264 ILE GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN SEQRES 11 A 264 MET GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO SEQRES 12 A 264 GLU LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR SEQRES 13 A 264 THR THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU SEQRES 14 A 264 LEU THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN SEQRES 15 A 264 LEU ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO SEQRES 16 A 264 LEU LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA SEQRES 17 A 264 ASP LYS SER GLY TYR GLY GLU ARG GLY SER ARG GLY ILE SEQRES 18 A 264 ILE ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE SEQRES 19 A 264 VAL VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP SEQRES 20 A 264 GLU ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU SEQRES 21 A 264 ILE LYS HIS TRP SEQRES 1 B 264 GLY HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU SEQRES 2 B 264 ASP GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP SEQRES 3 B 264 LEU ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU SEQRES 4 B 264 GLU ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU SEQRES 5 B 264 CYS GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU SEQRES 6 B 264 GLN LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU SEQRES 7 B 264 VAL GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP SEQRES 8 B 264 GLY MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR SEQRES 9 B 264 MET SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR SEQRES 10 B 264 ILE GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN SEQRES 11 B 264 MET GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO SEQRES 12 B 264 GLU LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR SEQRES 13 B 264 THR THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU SEQRES 14 B 264 LEU THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN SEQRES 15 B 264 LEU ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO SEQRES 16 B 264 LEU LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA SEQRES 17 B 264 ASP LYS SER GLY TYR GLY GLU ARG GLY SER ARG GLY ILE SEQRES 18 B 264 ILE ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE SEQRES 19 B 264 VAL VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP SEQRES 20 B 264 GLU ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU SEQRES 21 B 264 ILE LYS HIS TRP SEQRES 1 C 264 GLY HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU SEQRES 2 C 264 ASP GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP SEQRES 3 C 264 LEU ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU SEQRES 4 C 264 GLU ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU SEQRES 5 C 264 CYS GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU SEQRES 6 C 264 GLN LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU SEQRES 7 C 264 VAL GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP SEQRES 8 C 264 GLY MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR SEQRES 9 C 264 MET SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR SEQRES 10 C 264 ILE GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN SEQRES 11 C 264 MET GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO SEQRES 12 C 264 GLU LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR SEQRES 13 C 264 THR THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU SEQRES 14 C 264 LEU THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN SEQRES 15 C 264 LEU ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO SEQRES 16 C 264 LEU LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA SEQRES 17 C 264 ASP LYS SER GLY TYR GLY GLU ARG GLY SER ARG GLY ILE SEQRES 18 C 264 ILE ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE SEQRES 19 C 264 VAL VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP SEQRES 20 C 264 GLU ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU SEQRES 21 C 264 ILE LYS HIS TRP SEQRES 1 D 264 GLY HIS PRO GLU THR LEU VAL LYS VAL LYS ASP ALA GLU SEQRES 2 D 264 ASP GLN LEU GLY ALA ARG VAL GLY TYR ILE GLU LEU ASP SEQRES 3 D 264 LEU ASN SER GLY LYS ILE LEU GLU SER PHE ARG PRO GLU SEQRES 4 D 264 GLU ARG PHE PRO MET MET SER THR PHE LYS VAL LEU LEU SEQRES 5 D 264 CYS GLY ALA VAL LEU SER ARG VAL ASP ALA GLY GLN GLU SEQRES 6 D 264 GLN LEU GLY ARG ARG ILE HIS TYR SER GLN ASN ASP LEU SEQRES 7 D 264 VAL GLU TYR SER PRO VAL THR GLU LYS HIS LEU THR ASP SEQRES 8 D 264 GLY MET THR VAL ARG GLU LEU CYS SER ALA ALA ILE THR SEQRES 9 D 264 MET SER ASP ASN THR ALA ALA ASN LEU LEU LEU THR THR SEQRES 10 D 264 ILE GLY GLY PRO LYS GLU LEU THR ALA PHE LEU HIS ASN SEQRES 11 D 264 MET GLY ASP HIS VAL THR ARG LEU ASP ARG TRP GLU PRO SEQRES 12 D 264 GLU LEU ASN GLU ALA ILE PRO ASN ASP GLU ARG ASP THR SEQRES 13 D 264 THR THR PRO ALA ALA MET ALA THR THR LEU ARG LYS LEU SEQRES 14 D 264 LEU THR GLY GLU LEU LEU THR LEU ALA SER ARG GLN GLN SEQRES 15 D 264 LEU ILE ASP TRP MET GLU ALA ASP LYS VAL ALA GLY PRO SEQRES 16 D 264 LEU LEU ARG SER ALA LEU PRO ALA GLY TRP PHE ILE ALA SEQRES 17 D 264 ASP LYS SER GLY TYR GLY GLU ARG GLY SER ARG GLY ILE SEQRES 18 D 264 ILE ALA ALA LEU GLY PRO ASP GLY LYS PRO SER ARG ILE SEQRES 19 D 264 VAL VAL ILE TYR THR THR GLY SER GLN ALA THR MET ASP SEQRES 20 D 264 GLU ARG ASN ARG GLN ILE ALA GLU ILE GLY ALA SER LEU SEQRES 21 D 264 ILE LYS HIS TRP HET NXL A 301 17 HET NXL B 301 17 HET NXL C 301 17 HET NXL D 301 17 HETNAM NXL (2S,5R)-1-FORMYL-5-[(SULFOOXY)AMINO]PIPERIDINE-2- HETNAM 2 NXL CARBOXAMIDE HETSYN NXL AVIBACTAM, BOUND FORM; NXL104, BOUND FORM FORMUL 5 NXL 4(C7 H13 N3 O6 S) FORMUL 9 HOH *1270(H2 O) HELIX 1 AA1 HIS A 26 GLY A 41 1 16 HELIX 2 AA2 THR A 71 ALA A 86 1 16 HELIX 3 AA3 SER A 98 LEU A 102 5 5 HELIX 4 AA4 VAL A 108 HIS A 112 5 5 HELIX 5 AA5 VAL A 119 MET A 129 1 11 HELIX 6 AA6 ASP A 131 GLY A 143 1 13 HELIX 7 AA7 GLY A 144 MET A 155 1 12 HELIX 8 AA8 PRO A 167 GLU A 171 5 5 HELIX 9 AA9 THR A 182 GLY A 196 1 15 HELIX 10 AB1 THR A 200 ALA A 213 1 14 HELIX 11 AB2 LEU A 220 LEU A 225 5 6 HELIX 12 AB3 THR A 269 HIS A 287 1 19 HELIX 13 AB4 PRO B 27 GLY B 41 1 15 HELIX 14 AB5 THR B 71 ALA B 86 1 16 HELIX 15 AB6 SER B 98 LEU B 102 5 5 HELIX 16 AB7 VAL B 108 HIS B 112 5 5 HELIX 17 AB8 VAL B 119 MET B 129 1 11 HELIX 18 AB9 ASP B 131 GLY B 143 1 13 HELIX 19 AC1 GLY B 144 MET B 155 1 12 HELIX 20 AC2 PRO B 167 GLU B 171 5 5 HELIX 21 AC3 THR B 182 GLY B 196 1 15 HELIX 22 AC4 THR B 200 ALA B 213 1 14 HELIX 23 AC5 LEU B 220 LEU B 225 5 6 HELIX 24 AC6 THR B 269 HIS B 287 1 19 HELIX 25 AC7 PRO C 27 GLY C 41 1 15 HELIX 26 AC8 THR C 71 ALA C 86 1 16 HELIX 27 AC9 SER C 98 LEU C 102 5 5 HELIX 28 AD1 VAL C 108 HIS C 112 5 5 HELIX 29 AD2 VAL C 119 MET C 129 1 11 HELIX 30 AD3 ASP C 131 GLY C 143 1 13 HELIX 31 AD4 GLY C 144 MET C 155 1 12 HELIX 32 AD5 PRO C 167 GLU C 171 5 5 HELIX 33 AD6 THR C 182 GLY C 196 1 15 HELIX 34 AD7 THR C 200 ALA C 213 1 14 HELIX 35 AD8 LEU C 220 LEU C 225 1 6 HELIX 36 AD9 THR C 269 HIS C 287 1 19 HELIX 37 AE1 PRO D 27 GLY D 41 1 15 HELIX 38 AE2 THR D 71 ALA D 86 1 16 HELIX 39 AE3 SER D 98 LEU D 102 5 5 HELIX 40 AE4 VAL D 108 HIS D 112 5 5 HELIX 41 AE5 VAL D 119 MET D 129 1 11 HELIX 42 AE6 ASP D 131 GLY D 143 1 13 HELIX 43 AE7 GLY D 144 MET D 155 1 12 HELIX 44 AE8 PRO D 167 GLU D 171 5 5 HELIX 45 AE9 THR D 182 GLY D 196 1 15 HELIX 46 AF1 THR D 200 ALA D 213 1 14 HELIX 47 AF2 LEU D 220 LEU D 225 5 6 HELIX 48 AF3 THR D 269 HIS D 287 1 19 SHEET 1 AA1 5 ILE A 56 PHE A 60 0 SHEET 2 AA1 5 ARG A 43 ASP A 50 -1 N GLU A 48 O LEU A 57 SHEET 3 AA1 5 ARG A 257 THR A 264 -1 O ILE A 258 N LEU A 49 SHEET 4 AA1 5 SER A 242 GLY A 250 -1 N LEU A 249 O ARG A 257 SHEET 5 AA1 5 PHE A 230 GLY A 238 -1 N ALA A 232 O ALA A 248 SHEET 1 AA2 2 PHE A 66 PRO A 67 0 SHEET 2 AA2 2 THR A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 1 AA3 2 ARG A 94 ILE A 95 0 SHEET 2 AA3 2 MET A 117 THR A 118 -1 O MET A 117 N ILE A 95 SHEET 1 AA4 5 ILE B 56 PHE B 60 0 SHEET 2 AA4 5 ARG B 43 ASP B 50 -1 N GLU B 48 O LEU B 57 SHEET 3 AA4 5 ARG B 257 THR B 264 -1 O ILE B 258 N LEU B 49 SHEET 4 AA4 5 SER B 242 GLY B 250 -1 N ILE B 245 O ILE B 261 SHEET 5 AA4 5 PHE B 230 GLY B 238 -1 N PHE B 230 O GLY B 250 SHEET 1 AA5 2 PHE B 66 PRO B 67 0 SHEET 2 AA5 2 THR B 180 THR B 181 -1 O THR B 181 N PHE B 66 SHEET 1 AA6 2 ARG B 94 ILE B 95 0 SHEET 2 AA6 2 MET B 117 THR B 118 -1 O MET B 117 N ILE B 95 SHEET 1 AA7 5 ILE C 56 PHE C 60 0 SHEET 2 AA7 5 ARG C 43 ASP C 50 -1 N GLU C 48 O LEU C 57 SHEET 3 AA7 5 ARG C 257 THR C 264 -1 O ILE C 258 N LEU C 49 SHEET 4 AA7 5 SER C 242 GLY C 250 -1 N ILE C 245 O ILE C 261 SHEET 5 AA7 5 PHE C 230 GLY C 238 -1 N PHE C 230 O GLY C 250 SHEET 1 AA8 2 PHE C 66 PRO C 67 0 SHEET 2 AA8 2 THR C 180 THR C 181 -1 O THR C 181 N PHE C 66 SHEET 1 AA9 2 ARG C 94 ILE C 95 0 SHEET 2 AA9 2 MET C 117 THR C 118 -1 O MET C 117 N ILE C 95 SHEET 1 AB1 5 ILE D 56 PHE D 60 0 SHEET 2 AB1 5 ARG D 43 ASP D 50 -1 N GLU D 48 O LEU D 57 SHEET 3 AB1 5 ARG D 257 THR D 264 -1 O ILE D 258 N LEU D 49 SHEET 4 AB1 5 SER D 242 GLY D 250 -1 N ARG D 243 O THR D 263 SHEET 5 AB1 5 PHE D 230 GLY D 238 -1 N ALA D 232 O ALA D 248 SHEET 1 AB2 2 PHE D 66 PRO D 67 0 SHEET 2 AB2 2 THR D 180 THR D 181 -1 O THR D 181 N PHE D 66 SHEET 1 AB3 2 ARG D 94 ILE D 95 0 SHEET 2 AB3 2 MET D 117 THR D 118 -1 O MET D 117 N ILE D 95 SSBOND 1 CYS A 77 CYS A 123 1555 1555 2.03 SSBOND 2 CYS B 77 CYS B 123 1555 1555 2.04 SSBOND 3 CYS C 77 CYS C 123 1555 1555 2.03 SSBOND 4 CYS D 77 CYS D 123 1555 1555 2.04 LINK OG SER A 70 CAN NXL A 301 1555 1555 1.38 LINK OG SER B 70 CAN NXL B 301 1555 1555 1.38 LINK OG SER C 70 CAN NXL C 301 1555 1555 1.37 LINK OG SER D 70 CAN NXL D 301 1555 1555 1.38 CISPEP 1 GLU A 166 PRO A 167 0 3.73 CISPEP 2 GLU B 166 PRO B 167 0 4.49 CISPEP 3 GLU C 166 PRO C 167 0 3.51 CISPEP 4 GLU D 166 PRO D 167 0 4.39 CRYST1 60.610 83.570 95.860 90.00 90.44 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016499 0.000000 0.000126 0.00000 SCALE2 0.000000 0.011966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010432 0.00000